AlfalfaGEDB | MsG0480023842.01

M. sativa cultivar ZhongmuNo.1 / MsG0480023842.01

KEGG: K11253
GO: GO:0000786 GO:0003677 GO:0046982
PFAM: PF00125

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023842.01.T01	KYP58465.1	100	136	0	0	1	136	5	140	1.76E-92	273

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023842.01.T01	P68427	100	136	0	0	1	136	1	136	5.13E-95	272

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023842.01.T01	A0A452Z7H5	100.000	136	0	0	1	136	100	235	3.73e-93	278

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0480023842.01	0.826234	3.033915e-54	2.828817e-51
MsG0080048797.01	MsG0480023842.01	0.894011	3.680020e-75	3.592394e-71
MsG0180000243.01	MsG0480023842.01	0.807848	4.136912e-50	2.328836e-47
MsG0180001288.01	MsG0480023842.01	0.837941	3.862107e-57	5.095080e-54
MsG0180001293.01	MsG0480023842.01	0.806731	7.132536e-50	3.900587e-47
MsG0180001588.01	MsG0480023842.01	0.835764	1.387957e-56	1.713929e-53
MsG0180001719.01	MsG0480023842.01	0.876319	1.534687e-68	7.407277e-65
MsG0180002134.01	MsG0480023842.01	0.831461	1.647662e-55	1.789290e-52
MsG0180002217.01	MsG0480023842.01	0.808617	2.836771e-50	1.629468e-47
MsG0180002218.01	MsG0480023842.01	0.806724	7.156767e-50	3.913099e-47
MsG0180002428.01	MsG0480023842.01	0.857893	1.196745e-62	2.999130e-59
MsG0180003857.01	MsG0480023842.01	0.825831	3.781641e-54	3.485822e-51
MsG0180003905.01	MsG0480023842.01	0.853795	1.887211e-61	4.126260e-58
MsG0180003983.01	MsG0480023842.01	0.801494	8.770535e-49	4.194452e-46
MsG0180004120.01	MsG0480023842.01	0.894429	2.488034e-75	2.472278e-71
MsG0180004185.01	MsG0480023842.01	0.834792	2.441861e-56	2.928361e-53
MsG0180004299.01	MsG0480023842.01	0.803241	3.828839e-49	1.914351e-46
MsG0180004471.01	MsG0480023842.01	0.803517	3.356362e-49	1.690145e-46
MsG0180004538.01	MsG0480023842.01	0.841478	4.639028e-58	6.825447e-55
MsG0180004583.01	MsG0480023842.01	0.873908	1.021036e-67	4.505924e-64
MsG0180004660.01	MsG0480023842.01	0.808764	2.638251e-50	1.521341e-47
MsG0180005048.01	MsG0480023842.01	0.808411	3.137710e-50	1.792834e-47
MsG0180005325.01	MsG0480023842.01	0.813167	2.935355e-51	1.902686e-48
MsG0180005621.01	MsG0480023842.01	0.823095	1.665267e-53	1.420117e-50
MsG0180005655.01	MsG0480023842.01	0.851445	8.836256e-61	1.788938e-57
MsG0180006133.01	MsG0480023842.01	0.800476	1.415511e-48	6.597258e-46
MsG0180006183.01	MsG0480023842.01	0.847501	1.111008e-59	1.978784e-56
MsG0280006378.01	MsG0480023842.01	0.806599	7.606803e-50	4.145691e-47
MsG0280010617.01	MsG0480023842.01	0.818175	2.247639e-52	1.670300e-49
MsG0280010825.01	MsG0480023842.01	0.809157	2.173786e-50	1.266785e-47
MsG0380012956.01	MsG0480023842.01	0.827360	1.632913e-54	1.573118e-51
MsG0380013540.01	MsG0480023842.01	0.827908	1.206480e-54	1.180763e-51
MsG0380014542.01	MsG0480023842.01	0.918544	1.367012e-86	4.181661e-82
MsG0380014544.01	MsG0480023842.01	0.884957	1.229251e-71	8.279867e-68
MsG0380014666.01	MsG0480023842.01	0.864879	8.847865e-65	2.821054e-61
MsG0480018875.01	MsG0480023842.01	0.803447	3.471654e-49	1.744966e-46
MsG0480019601.01	MsG0480023842.01	0.817405	3.354165e-52	2.440507e-49
MsG0480020398.01	MsG0480023842.01	0.893867	4.211267e-75	4.087571e-71
MsG0480020921.01	MsG0480023842.01	0.842764	2.118166e-58	3.244172e-55
MsG0480020926.01	MsG0480023842.01	0.841816	3.777332e-58	5.615881e-55
MsG0480020937.01	MsG0480023842.01	0.921602	2.897050e-88	1.045879e-83
MsG0480020970.01	MsG0480023842.01	0.864407	1.243473e-64	3.899940e-61
MsG0480021048.01	MsG0480023842.01	0.818467	1.930786e-52	1.446525e-49
MsG0480021100.01	MsG0480023842.01	0.920285	1.553123e-87	5.221063e-83
MsG0480021301.01	MsG0480023842.01	0.872207	3.798005e-67	1.575593e-63
MsG0480021436.01	MsG0480023842.01	0.805938	1.048312e-49	5.617956e-47
MsG0480021456.01	MsG0480023842.01	0.826582	2.506923e-54	2.360528e-51
MsG0480021486.01	MsG0480023842.01	0.832835	7.535639e-56	8.522642e-53
MsG0480021704.01	MsG0480023842.01	0.865900	4.221813e-65	1.396270e-61
MsG0480021740.01	MsG0480023842.01	0.814284	1.666011e-51	1.113231e-48
MsG0480021773.01	MsG0480023842.01	0.911001	9.962871e-83	2.092574e-78
MsG0480021902.01	MsG0480023842.01	0.888617	5.038059e-73	3.931598e-69
MsG0480022307.01	MsG0480023842.01	0.937802	1.914841e-98	1.773276e-93
MsG0480022378.01	MsG0480023842.01	0.889563	2.165086e-73	1.755861e-69
MsG0480022682.01	MsG0480023842.01	0.828516	8.609494e-55	8.577025e-52
MsG0480022784.01	MsG0480023842.01	0.822033	2.940881e-53	2.433134e-50
MsG0480023003.01	MsG0480023842.01	0.811661	6.262119e-51	3.898938e-48
MsG0480023414.01	MsG0480023842.01	0.850539	1.590695e-60	3.125989e-57
MsG0480023424.01	MsG0480023842.01	0.856789	2.536552e-62	6.123600e-59
MsG0480023426.01	MsG0480023842.01	0.928912	1.472777e-92	7.988146e-88
MsG0480023428.01	MsG0480023842.01	0.820618	6.236302e-53	4.958718e-50
MsG0480023626.01	MsG0480023842.01	0.831898	1.285828e-55	1.414667e-52
MsG0480023679.01	MsG0480023842.01	0.815824	7.584696e-52	5.284741e-49
MsG0480023706.01	MsG0480023842.01	0.835503	1.615634e-56	1.979530e-53
MsG0480023842.01	MsG0480023913.01	0.898446	5.263857e-77	6.224045e-73
MsG0480023842.01	MsG0480024002.01	0.802618	5.149709e-49	2.534202e-46
MsG0480023842.01	MsG0480024019.01	0.942059	1.403965e-101	1.711719e-96
MsG0480023842.01	MsG0580024276.01	0.917992	2.696054e-86	8.015619e-82
MsG0480023842.01	MsG0580025504.01	0.913405	6.389503e-84	1.508617e-79
MsG0480023842.01	MsG0580026343.01	0.829335	5.453487e-55	5.565375e-52
MsG0480023842.01	MsG0580028927.01	0.837292	5.665100e-57	7.325382e-54
MsG0480023842.01	MsG0580028955.01	0.902145	1.307586e-78	1.826224e-74
MsG0480023842.01	MsG0580030141.01	0.852477	4.498836e-61	9.411952e-58
MsG0480023842.01	MsG0680030958.01	0.810632	1.046709e-50	6.342125e-48
MsG0480023842.01	MsG0680031356.01	0.868788	5.031327e-66	1.843324e-62
MsG0480023842.01	MsG0680034619.01	0.800711	1.267802e-48	5.943972e-46
MsG0480023842.01	MsG0680035792.01	0.840046	1.100549e-57	1.548989e-54
MsG0480023842.01	MsG0780036534.01	0.809126	2.207252e-50	1.285238e-47
MsG0480023842.01	MsG0780036553.01	0.802030	6.806675e-49	3.299748e-46
MsG0480023842.01	MsG0780038642.01	0.855647	5.481557e-62	1.274379e-58
MsG0480023842.01	MsG0780038647.01	0.830028	3.698657e-55	3.850782e-52
MsG0480023842.01	MsG0780038736.01	0.869420	3.137565e-66	1.176940e-62
MsG0480023842.01	MsG0780039536.01	0.851324	9.560839e-61	1.928237e-57
MsG0480023842.01	MsG0780040459.01	0.875164	3.823352e-68	1.767540e-64
MsG0480023842.01	MsG0780040554.01	0.891150	5.166998e-74	4.476675e-70
MsG0480023842.01	MsG0780040641.01	0.828287	9.776556e-55	9.674612e-52
MsG0480023842.01	MsG0780040899.01	0.864455	1.201053e-64	3.773444e-61
MsG0480023842.01	MsG0780041008.01	0.818743	1.671204e-52	1.261527e-49
MsG0480023842.01	MsG0780041219.01	0.813217	2.861564e-51	1.857428e-48
MsG0480023842.01	MsG0780041232.01	0.839702	1.352795e-57	1.883232e-54
MsG0480023842.01	MsG0780041273.01	0.900629	6.051244e-78	7.892792e-74
MsG0480023842.01	MsG0780041359.01	0.833689	4.617280e-56	5.357116e-53
MsG0480023842.01	MsG0780041560.01	0.821651	3.605387e-53	2.950747e-50
MsG0480023842.01	MsG0780041820.01	0.802065	6.694827e-49	3.248451e-46
MsG0480023842.01	MsG0880042392.01	0.818164	2.260596e-52	1.679394e-49
MsG0480023842.01	MsG0880043684.01	0.821549	3.806241e-53	3.106217e-50
MsG0480023842.01	MsG0880044437.01	0.847976	8.224193e-60	1.486953e-56
MsG0480023842.01	MsG0880045015.01	0.854928	8.875563e-62	2.014608e-58
MsG0480023842.01	MsG0880045356.01	0.853043	3.100998e-61	6.611710e-58
MsG0480023842.01	MsG0880045612.01	0.806028	1.003510e-49	5.390180e-47
MsG0480023842.01	MsG0880045647.01	0.877705	5.070359e-69	2.575036e-65
MsG0480023842.01	MsG0880045879.01	0.829024	6.487258e-55	6.558600e-52
MsG0480023842.01	MsG0880046529.01	0.826049	3.357597e-54	3.114174e-51
MsG0480023842.01	MsG0880046904.01	0.847576	1.059740e-59	1.891967e-56
MsG0480023842.01	MsG0880046905.01	0.853543	2.229571e-61	4.834475e-58
MsG0480023842.01	MsG0880047414.01	0.837986	3.759812e-57	4.967387e-54
MsG0480023842.01	MsG0880047649.01	0.825066	5.740474e-54	5.177290e-51
MsG0480023842.01	MsG0880047681.01	0.828303	9.688765e-55	9.592010e-52
MsG0380015090.01	MsG0480023842.01	0.831455	1.653593e-55	1.795409e-52
MsG0380015340.01	MsG0480023842.01	0.886127	4.479893e-72	3.159945e-68
MsG0380015402.01	MsG0480023842.01	0.843103	1.721619e-58	2.665043e-55
MsG0380015656.01	MsG0480023842.01	0.820648	6.137391e-53	4.884143e-50
MsG0380015954.01	MsG0480023842.01	0.825738	3.980140e-54	3.658995e-51
MsG0380016027.01	MsG0480023842.01	0.835511	1.608614e-56	1.971334e-53
MsG0380016165.01	MsG0480023842.01	0.804210	2.409951e-49	1.235273e-46
MsG0380016250.01	MsG0480023842.01	0.828756	7.531006e-55	7.554402e-52
MsG0380016819.01	MsG0480023842.01	0.823416	1.401421e-53	1.205805e-50
MsG0380017128.01	MsG0480023842.01	0.837312	5.597935e-57	7.243204e-54
MsG0380017332.01	MsG0480023842.01	0.818355	2.047358e-52	1.529094e-49
MsG0380017416.01	MsG0480023842.01	0.829487	5.007916e-55	5.132680e-52
MsG0380017588.01	MsG0480023842.01	0.819059	1.416661e-52	1.078790e-49
MsG0380017605.01	MsG0480023842.01	0.801374	9.281797e-49	4.425451e-46
MsG0380017696.01	MsG0480023842.01	0.912361	2.127922e-83	4.769443e-79
MsG0380017932.01	MsG0480023842.01	0.829363	5.367542e-55	5.482103e-52
MsG0380018055.01	MsG0480023842.01	0.842682	2.227226e-58	3.402691e-55
MsG0480018111.01	MsG0480023842.01	0.806301	8.793282e-50	4.756010e-47
MsG0480018228.01	MsG0480023842.01	0.908327	1.929446e-81	3.564182e-77
MsG0280006666.01	MsG0480023842.01	0.806046	9.947574e-50	5.345618e-47
MsG0280006851.01	MsG0480023842.01	0.817361	3.432358e-52	2.494318e-49
MsG0280006909.01	MsG0480023842.01	0.802577	5.251952e-49	2.581730e-46
MsG0280007423.01	MsG0480023842.01	-0.826066	3.325349e-54	3.085662e-51
MsG0280007688.01	MsG0480023842.01	0.818868	1.565566e-52	1.185928e-49
MsG0280007695.01	MsG0480023842.01	0.840424	8.767304e-58	1.248294e-54
MsG0280007919.01	MsG0480023842.01	0.900895	4.634266e-78	6.108345e-74

PPI

Gene1	Gene2	Type
MsG0480021302.01	MsG0480023842.01	PPI
MsG0480020919.01	MsG0480023842.01	PPI
MsG0180000092.01	MsG0480023842.01	PPI
MsG0280007919.01	MsG0480023842.01	PPI
MsG0780039858.01	MsG0480023842.01	PPI
MsG0480023842.01	MsG0880044881.01	PPI
MsG0880046700.01	MsG0480023842.01	PPI
MsG0380012103.01	MsG0480023842.01	PPI
MsG0480021015.01	MsG0480023842.01	PPI
MsG0780041592.01	MsG0480023842.01	PPI
MsG0380018077.01	MsG0480023842.01	PPI
MsG0480023842.01	MsG0580025504.01	PPI
MsG0580029382.01	MsG0480023842.01	PPI
MsG0480023842.01	MsG0480020920.01	PPI
MsG0480020918.01	MsG0480023842.01	PPI
MsG0880045015.01	MsG0480023842.01	PPI
MsG0480022796.01	MsG0480023842.01	PPI
MsG0680034619.01	MsG0480023842.01	PPI
MsG0880044910.01	MsG0480023842.01	PPI
MsG0580025506.01	MsG0480023842.01	PPI
MsG0780038642.01	MsG0480023842.01	PPI
MsG0880044881.01	MsG0480023842.01	PPI
MsG0480023842.01	MsG0780036534.01	PPI
MsG0480021252.01	MsG0480023842.01	PPI
MsG0480020927.01	MsG0480023842.01	PPI
MsG0580025504.01	MsG0480023842.01	PPI
MsG0480020969.01	MsG0480023842.01	PPI
MsG0480023842.01	MsG0780041593.01	PPI
MsG0880045996.01	MsG0480023842.01	PPI
MsG0380016970.01	MsG0480023842.01	PPI
MsG0480021049.01	MsG0480023842.01	PPI
MsG0380016970.01	MsG0480023842.01	PPI
MsG0380017977.01	MsG0480023842.01	PPI
MsG0580029044.01	MsG0480023842.01	PPI
MsG0480022307.01	MsG0480023842.01	PPI
MsG0880044910.01	MsG0480023842.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023842.01.T01	MTR_7g059070	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0480023842.01.T01	MTR_5g029820	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0480023842.01.T01	MTR_5g029770	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0480023842.01.T01	MTR_4g065990	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0480023842.01.T01	MTR_4g088150	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0480023842.01.T01	MTR_2g035230	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0480023842.01.T01	MTR_8g092720	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0480023842.01.T01	MTR_8g063500	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0480023842.01.T01	MTR_8g103245	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0480023842.01.T01	MTR_8g092820	100.000	136	0	0	1	136	1	136	4.99e-96	272
MsG0480023842.01.T01	MTR_7g013610	100.000	136	0	0	1	136	100	235	1.15e-95	275
MsG0480023842.01.T01	MTR_4g097175	97.059	136	4	0	1	136	1	136	3.42e-93	265
MsG0480023842.01.T01	MTR_1g023630	97.059	136	4	0	1	136	1	136	3.42e-93	265
MsG0480023842.01.T01	MTR_8g061940	97.059	136	4	0	1	136	1	136	3.42e-93	265
MsG0480023842.01.T01	MTR_8g099430	96.324	136	5	0	1	136	1	136	1.44e-92	264
MsG0480023842.01.T01	MTR_4g097170	96.324	136	5	0	1	136	42	177	2.38e-91	262
MsG0480023842.01.T01	MTR_2g082310	89.706	136	14	0	1	136	1	136	1.44e-86	248
MsG0480023842.01.T01	MTR_2g082340	89.706	136	14	0	1	136	1	136	1.44e-86	248
MsG0480023842.01.T01	MTR_2g082370	85.616	146	11	1	1	136	1	146	1.82e-82	238
MsG0480023842.01.T01	MTR_2g082400	84.559	136	19	2	1	135	1	135	6.64e-75	219
MsG0480023842.01.T01	MTR_7g013600	86.607	112	15	0	25	136	2	113	1.05e-65	195
MsG0480023842.01.T01	MTR_7g023830	67.164	134	43	1	1	134	1	133	6.74e-56	171
MsG0480023842.01.T01	MTR_1g023630	73.504	117	15	3	1	111	1	107	3.96e-52	160
MsG0480023842.01.T01	MTR_5g024630	67.241	116	35	2	1	116	1	113	1.69e-45	144
MsG0480023842.01.T01	MTR_7g023880	58.647	133	41	3	3	134	18	137	5.67e-43	139
MsG0480023842.01.T01	MTR_5g024530	68.182	110	12	2	19	128	68	154	4.74e-42	137
MsG0480023842.01.T01	MTR_0197s0100	100.000	66	0	0	1	66	1	66	1.50e-40	132
MsG0480023842.01.T01	MTR_8g027840	55.102	98	43	1	37	133	28	125	5.01e-30	105
MsG0480023842.01.T01	MTR_8g105150	53.846	91	10	1	37	127	11	69	1.48e-25	92.4
MsG0480023842.01.T01	MTR_8g092740	97.368	38	1	0	99	136	118	155	4.75e-20	80.9
MsG0480023842.01.T01	MTR_5g089120	76.190	42	10	0	82	123	6	47	6.26e-18	73.6
MsG0480023842.01.T01	MTR_5g024600	62.963	54	20	0	1	54	1	54	1.81e-15	66.2
MsG0480023842.01.T01	MTR_4g128040	75.676	37	9	0	79	115	20	56	3.48e-15	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023842.01.T01	AT5G65360	99.265	136	1	0	1	136	1	136	1.62e-95	271
MsG0480023842.01.T01	AT5G10390	99.265	136	1	0	1	136	1	136	1.62e-95	271
MsG0480023842.01.T01	AT5G10400	99.265	136	1	0	1	136	1	136	1.62e-95	271
MsG0480023842.01.T01	AT3G27360	99.265	136	1	0	1	136	1	136	1.62e-95	271
MsG0480023842.01.T01	AT1G09200	99.265	136	1	0	1	136	1	136	1.62e-95	271
MsG0480023842.01.T01	AT5G10980	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0480023842.01.T01	AT4G40040	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0480023842.01.T01	AT4G40040	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0480023842.01.T01	AT4G40040	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0480023842.01.T01	AT4G40030	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0480023842.01.T01	AT4G40030	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0480023842.01.T01	AT4G40030	97.059	136	4	0	1	136	1	136	3.59e-93	265
MsG0480023842.01.T01	AT4G40030	97.059	136	4	0	1	136	29	164	7.04e-93	266
MsG0480023842.01.T01	AT5G65350	94.853	136	7	0	1	136	1	136	5.30e-91	260
MsG0480023842.01.T01	AT1G75600	93.382	136	9	0	1	136	1	136	1.25e-89	256
MsG0480023842.01.T01	AT1G13370	93.382	136	9	0	1	136	1	136	5.55e-89	254
MsG0480023842.01.T01	AT1G19890	89.781	137	13	1	1	136	1	137	1.07e-83	241
MsG0480023842.01.T01	AT5G12910	71.111	135	34	2	1	135	1	130	9.89e-67	198
MsG0480023842.01.T01	AT1G01370	53.982	113	49	2	24	134	63	174	2.97e-31	110
MsG0480023842.01.T01	AT1G01370	53.982	113	49	2	24	134	63	174	2.97e-31	110
MsG0480023842.01.T01	AT1G01370	53.982	113	49	2	24	134	63	174	2.97e-31	110
MsG0480023842.01.T01	AT1G01370	53.982	113	49	2	24	134	63	174	2.97e-31	110

Find 41 sgRNAs with CRISPR-Local

Find 41 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGATTTCTCTAACCAATCTT+TGG	0.224743	4:+90393669	None:intergenic
GCCGCTGAAGCTTATCTTGT+TGG	0.348800	4:-90393587	MsG0480023842.01.T01:CDS
TTGAATATCCTTAGGCATAA+TGG	0.349539	4:+90393517	None:intergenic
AGCTGATTTCCGAGCGGCTT+TGG	0.356003	4:+90393805	None:intergenic
TCACGAAGAGCAACAGTTCC+GGG	0.371586	4:+90393743	None:intergenic
CTCACGAAGAGCAACAGTTC+CGG	0.390727	4:+90393742	None:intergenic
TTCTTCACTCCTCCGGTGGC+CGG	0.400280	4:+90393782	None:intergenic
GAAGCTTCCATTCCAAAGAT+TGG	0.412914	4:-90393681	MsG0480023842.01.T01:CDS
CTTGCAAGTTGAATATCCTT+AGG	0.413826	4:+90393509	None:intergenic
AGGATTTCAAAACTGATCTC+AGG	0.429009	4:-90393643	MsG0480023842.01.T01:CDS
GGATTTGCGAGCGGTTTGTT+TGG	0.441284	4:+90393862	None:intergenic
AGAGCACTGAGCTTCTCATC+AGG	0.458709	4:-90393703	MsG0480023842.01.T01:CDS
TTGGTGGCGAGTTGTTTCCT+TGG	0.473034	4:+90393824	None:intergenic
GGCTTCTTGAAGAGCAGAAA+CGG	0.474881	4:+90393607	None:intergenic
TTTCCTTGGAGCTTTGCCTC+CGG	0.476973	4:+90393838	None:intergenic
CGGAAATCAGCTCCGGCCAC+CGG	0.487022	4:-90393794	MsG0480023842.01.T01:CDS
CCTTGGAGCTTTGCCTCCGG+TGG	0.489182	4:+90393841	None:intergenic
TGATTTCCGAGCGGCTTTGG+TGG	0.495094	4:+90393808	None:intergenic
AGCCGCTCGGAAATCAGCTC+CGG	0.498921	4:-90393801	MsG0480023842.01.T01:CDS
CAGTGCTCTTCTGATACTTA+CGG	0.501233	4:+90393717	None:intergenic
GTGTGGCTTCTTCACTCCTC+CGG	0.509508	4:+90393775	None:intergenic
TCTCTAACCAATCTTTGGAA+TGG	0.520211	4:+90393674	None:intergenic
GAGAGTTACCATTATGCCTA+AGG	0.535535	4:-90393525	MsG0480023842.01.T01:CDS
AACTCGCCACCAAAGCCGCT+CGG	0.570459	4:-90393814	MsG0480023842.01.T01:CDS
CCACCGGAGGCAAAGCTCCA+AGG	0.572363	4:-90393841	MsG0480023842.01.T01:CDS
AAGAAGAATCAGAGGCGAGA+GGG	0.597241	4:-90393489	MsG0480023842.01.T01:CDS
TGGCTTCTTCACTCCTCCGG+TGG	0.598450	4:+90393778	None:intergenic
AAATCAGCTCCGGCCACCGG+AGG	0.599225	4:-90393791	MsG0480023842.01.T01:CDS
ATTGGTTAGAGAAATCGCTC+AGG	0.600201	4:-90393663	MsG0480023842.01.T01:CDS
AGCATGAATAGCGCAAAGGT+TGG	0.613099	4:+90393550	None:intergenic
CAAACCGCTCGCAAATCCAC+CGG	0.629023	4:-90393857	MsG0480023842.01.T01:CDS
GCCTCCGGTGGATTTGCGAG+CGG	0.639769	4:+90393853	None:intergenic
ACCGCTCGCAAATCCACCGG+AGG	0.648108	4:-90393854	MsG0480023842.01.T01:CDS
CAAGAAGAATCAGAGGCGAG+AGG	0.648850	4:-90393490	MsG0480023842.01.T01:CDS
AAGCCACACAGATTCCGTCC+CGG	0.653763	4:-90393761	MsG0480023842.01.T01:CDS
TCTTAGCATGAATAGCGCAA+AGG	0.658330	4:+90393546	None:intergenic
CAACTTGCAAGAAGAATCAG+AGG	0.660238	4:-90393497	MsG0480023842.01.T01:CDS
ACCAACAAGATAAGCTTCAG+CGG	0.667251	4:+90393586	None:intergenic
GAAGAGCAACAGTTCCGGGA+CGG	0.670696	4:+90393747	None:intergenic
GTTCCGGGACGGAATCTGTG+TGG	0.693886	4:+90393758	None:intergenic
GGCCGGAGCTGATTTCCGAG+CGG	0.718116	4:+90393799	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TTGAATATCCTTAGGCATAA+TGG	+	Chr4:90393842-90393861	None:intergenic	30.0%
	AGGATTTCAAAACTGATCTC+AGG	-	Chr4:90393713-90393732	MsG0480023842.01.T01:CDS	35.0%
	CGATTTCTCTAACCAATCTT+TGG	+	Chr4:90393690-90393709	None:intergenic	35.0%
!	CTTGCAAGTTGAATATCCTT+AGG	+	Chr4:90393850-90393869	None:intergenic	35.0%
!	TCTCTAACCAATCTTTGGAA+TGG	+	Chr4:90393685-90393704	None:intergenic	35.0%
	ACCAACAAGATAAGCTTCAG+CGG	+	Chr4:90393773-90393792	None:intergenic	40.0%
	ATTGGTTAGAGAAATCGCTC+AGG	-	Chr4:90393693-90393712	MsG0480023842.01.T01:CDS	40.0%
	CAACTTGCAAGAAGAATCAG+AGG	-	Chr4:90393859-90393878	MsG0480023842.01.T01:CDS	40.0%
	CAGTGCTCTTCTGATACTTA+CGG	+	Chr4:90393642-90393661	None:intergenic	40.0%
	GAAGCTTCCATTCCAAAGAT+TGG	-	Chr4:90393675-90393694	MsG0480023842.01.T01:CDS	40.0%
	GAGAGTTACCATTATGCCTA+AGG	-	Chr4:90393831-90393850	MsG0480023842.01.T01:CDS	40.0%
	TCTTAGCATGAATAGCGCAA+AGG	+	Chr4:90393813-90393832	None:intergenic	40.0%
	AAGAAGAATCAGAGGCGAGA+GGG	-	Chr4:90393867-90393886	MsG0480023842.01.T01:CDS	45.0%
	AGCATGAATAGCGCAAAGGT+TGG	+	Chr4:90393809-90393828	None:intergenic	45.0%
	GGCTTCTTGAAGAGCAGAAA+CGG	+	Chr4:90393752-90393771	None:intergenic	45.0%
	CAAGAAGAATCAGAGGCGAG+AGG	-	Chr4:90393866-90393885	MsG0480023842.01.T01:CDS	50.0%
	CTCACGAAGAGCAACAGTTC+CGG	+	Chr4:90393617-90393636	None:intergenic	50.0%
	GCCGCTGAAGCTTATCTTGT+TGG	-	Chr4:90393769-90393788	MsG0480023842.01.T01:CDS	50.0%
	TCACGAAGAGCAACAGTTCC+GGG	+	Chr4:90393616-90393635	None:intergenic	50.0%
	TTTCCTTGGAGCTTTGCCTC+CGG	+	Chr4:90393521-90393540	None:intergenic	50.0%
!	GGATTTGCGAGCGGTTTGTT+TGG	+	Chr4:90393497-90393516	None:intergenic	50.0%
!!	AGAGCACTGAGCTTCTCATC+AGG	-	Chr4:90393653-90393672	MsG0480023842.01.T01:CDS	50.0%
!!	TTGGTGGCGAGTTGTTTCCT+TGG	+	Chr4:90393535-90393554	None:intergenic	50.0%
	AAGCCACACAGATTCCGTCC+CGG	-	Chr4:90393595-90393614	MsG0480023842.01.T01:CDS	55.0%
	CAAACCGCTCGCAAATCCAC+CGG	-	Chr4:90393499-90393518	MsG0480023842.01.T01:CDS	55.0%
	GAAGAGCAACAGTTCCGGGA+CGG	+	Chr4:90393612-90393631	None:intergenic	55.0%
	GTGTGGCTTCTTCACTCCTC+CGG	+	Chr4:90393584-90393603	None:intergenic	55.0%
!	AGCTGATTTCCGAGCGGCTT+TGG	+	Chr4:90393554-90393573	None:intergenic	55.0%
!	TGATTTCCGAGCGGCTTTGG+TGG	+	Chr4:90393551-90393570	None:intergenic	55.0%
	AACTCGCCACCAAAGCCGCT+CGG	-	Chr4:90393542-90393561	MsG0480023842.01.T01:CDS	60.0%
	AGCCGCTCGGAAATCAGCTC+CGG	-	Chr4:90393555-90393574	MsG0480023842.01.T01:CDS	60.0%
	GTTCCGGGACGGAATCTGTG+TGG	+	Chr4:90393601-90393620	None:intergenic	60.0%
	TGGCTTCTTCACTCCTCCGG+TGG	+	Chr4:90393581-90393600	None:intergenic	60.0%
	TTCTTCACTCCTCCGGTGGC+CGG	+	Chr4:90393577-90393596	None:intergenic	60.0%
	AAATCAGCTCCGGCCACCGG+AGG	-	Chr4:90393565-90393584	MsG0480023842.01.T01:CDS	65.0%
	ACCGCTCGCAAATCCACCGG+AGG	-	Chr4:90393502-90393521	MsG0480023842.01.T01:CDS	65.0%
	CCACCGGAGGCAAAGCTCCA+AGG	-	Chr4:90393515-90393534	MsG0480023842.01.T01:CDS	65.0%
	CCTTGGAGCTTTGCCTCCGG+TGG	+	Chr4:90393518-90393537	None:intergenic	65.0%
	CGGAAATCAGCTCCGGCCAC+CGG	-	Chr4:90393562-90393581	MsG0480023842.01.T01:CDS	65.0%
!	GCCTCCGGTGGATTTGCGAG+CGG	+	Chr4:90393506-90393525	None:intergenic	65.0%
!	GGCCGGAGCTGATTTCCGAG+CGG	+	Chr4:90393560-90393579	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	90393484	90393894	90393484	ID=MsG0480023842.01;Name=MsG0480023842.01
Chr4	mRNA	90393484	90393894	90393484	ID=MsG0480023842.01.T01;Parent=MsG0480023842.01;Name=MsG0480023842.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|136
Chr4	exon	90393484	90393894	90393484	ID=MsG0480023842.01.T01:exon:7594;Parent=MsG0480023842.01.T01
Chr4	CDS	90393484	90393894	90393484	ID=MsG0480023842.01.T01:cds;Parent=MsG0480023842.01.T01

Gene Sequence

>MsG0480023842.01.T01

ATGGCTCGTACCAAACAAACCGCTCGCAAATCCACCGGAGGCAAAGCTCCAAGGAAACAACTCGCCACCAAAGCCGCTCGGAAATCAGCTCCGGCCACCGGAGGAGTGAAGAAGCCACACAGATTCCGTCCCGGAACTGTTGCTCTTCGTGAGATCCGTAAGTATCAGAAGAGCACTGAGCTTCTCATCAGGAAGCTTCCATTCCAAAGATTGGTTAGAGAAATCGCTCAGGATTTCAAAACTGATCTCAGGTTTCAGAGTAGCGCCGTTTCTGCTCTTCAAGAAGCCGCTGAAGCTTATCTTGTTGGTTTGTTTGAAGATACCAACCTTTGCGCTATTCATGCTAAGAGAGTTACCATTATGCCTAAGGATATTCAACTTGCAAGAAGAATCAGAGGCGAGAGGGCTTAG

Protein sequence

>MsG0480023842.01.T01

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*