Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007667.01.T01 | XP_013463000.1 | 97.039 | 439 | 11 | 1 | 1 | 437 | 1 | 439 | 0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007667.01.T01 | Q9SV43 | 48.63 | 438 | 196 | 7 | 2 | 412 | 32 | 467 | 2.05E-134 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007667.01.T01 | A0A072VFU2 | 97.039 | 439 | 11 | 1 | 1 | 437 | 1 | 439 | 0.0 | 860 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049008.01 | MsG0280007667.01 | 0.879483 | 1.200702e-69 | 6.520826e-66 |
| MsG0180000535.01 | MsG0280007667.01 | 0.847821 | 9.075236e-60 | 1.632846e-56 |
| MsG0180000551.01 | MsG0280007667.01 | 0.801252 | 9.829376e-49 | 4.672238e-46 |
| MsG0180001290.01 | MsG0280007667.01 | 0.818878 | 1.557582e-52 | 1.180201e-49 |
| MsG0180003484.01 | MsG0280007667.01 | 0.819944 | 8.902099e-53 | 6.947860e-50 |
| MsG0180003749.01 | MsG0280007667.01 | 0.818293 | 2.113937e-52 | 1.576027e-49 |
| MsG0180003857.01 | MsG0280007667.01 | 0.806633 | 7.483452e-50 | 4.081812e-47 |
| MsG0180003905.01 | MsG0280007667.01 | 0.848366 | 6.416147e-60 | 1.174726e-56 |
| MsG0180004027.01 | MsG0280007667.01 | 0.802760 | 4.815518e-49 | 2.378337e-46 |
| MsG0180004510.01 | MsG0280007667.01 | 0.807524 | 4.846908e-50 | 2.705725e-47 |
| MsG0180004652.01 | MsG0280007667.01 | 0.862400 | 5.205499e-64 | 1.522436e-60 |
| MsG0180004705.01 | MsG0280007667.01 | 0.847019 | 1.506935e-59 | 2.642517e-56 |
| MsG0180004828.01 | MsG0280007667.01 | 0.821970 | 3.042294e-53 | 2.512482e-50 |
| MsG0180005096.01 | MsG0280007667.01 | 0.811987 | 5.318304e-51 | 3.340362e-48 |
| MsG0180005367.01 | MsG0280007667.01 | 0.836353 | 9.834188e-57 | 1.236291e-53 |
| MsG0180005655.01 | MsG0280007667.01 | 0.806298 | 8.802521e-50 | 4.760791e-47 |
| MsG0180005819.01 | MsG0280007667.01 | 0.809986 | 1.442798e-50 | 8.595052e-48 |
| MsG0180006076.01 | MsG0280007667.01 | -0.826731 | 2.309658e-54 | 2.184160e-51 |
| MsG0180006116.01 | MsG0280007667.01 | 0.821798 | 3.334274e-53 | 2.740322e-50 |
| MsG0180006182.01 | MsG0280007667.01 | 0.845409 | 4.134846e-59 | 6.884313e-56 |
| MsG0180006191.01 | MsG0280007667.01 | 0.830749 | 2.464962e-55 | 2.620880e-52 |
| MsG0280006752.01 | MsG0280007667.01 | 0.821518 | 3.870216e-53 | 3.155545e-50 |
| MsG0280007281.01 | MsG0280007667.01 | 0.813412 | 2.593309e-51 | 1.692419e-48 |
| MsG0280007419.01 | MsG0280007667.01 | 0.845484 | 3.947094e-59 | 6.587445e-56 |
| MsG0280007667.01 | MsG0280008407.01 | 0.809389 | 1.938751e-50 | 1.136846e-47 |
| MsG0280007667.01 | MsG0280009526.01 | 0.851554 | 8.227437e-61 | 1.671564e-57 |
| MsG0280007667.01 | MsG0280010944.01 | 0.807768 | 4.301836e-50 | 2.416674e-47 |
| MsG0280007667.01 | MsG0280011106.01 | 0.822834 | 1.916585e-53 | 1.622416e-50 |
| MsG0280007667.01 | MsG0280011379.01 | 0.802339 | 5.880582e-49 | 2.873423e-46 |
| MsG0280007667.01 | MsG0380012818.01 | 0.825723 | 4.012954e-54 | 3.687581e-51 |
| MsG0280007667.01 | MsG0380013041.01 | 0.810277 | 1.248429e-50 | 7.493376e-48 |
| MsG0280007667.01 | MsG0380013843.01 | 0.808330 | 3.265458e-50 | 1.861941e-47 |
| MsG0280007667.01 | MsG0380014807.01 | 0.870677 | 1.218362e-66 | 4.779848e-63 |
| MsG0280007667.01 | MsG0380015370.01 | 0.805352 | 1.391312e-49 | 7.344574e-47 |
| MsG0280007667.01 | MsG0380015371.01 | 0.830920 | 2.237875e-55 | 2.391579e-52 |
| MsG0280007667.01 | MsG0380015429.01 | 0.817435 | 3.302988e-52 | 2.405258e-49 |
| MsG0280007667.01 | MsG0380015434.01 | 0.855598 | 5.667094e-62 | 1.315305e-58 |
| MsG0280007667.01 | MsG0380015641.01 | 0.809600 | 1.746202e-50 | 1.029746e-47 |
| MsG0280007667.01 | MsG0380015656.01 | 0.848542 | 5.737317e-60 | 1.056425e-56 |
| MsG0280007667.01 | MsG0380015871.01 | 0.883878 | 3.088807e-71 | 1.993559e-67 |
| MsG0280007667.01 | MsG0380016091.01 | 0.800009 | 1.761843e-48 | 8.114693e-46 |
| MsG0280007667.01 | MsG0380016110.01 | 0.810450 | 1.145707e-50 | 6.908213e-48 |
| MsG0280007667.01 | MsG0380016120.01 | 0.818814 | 1.610609e-52 | 1.218143e-49 |
| MsG0280007667.01 | MsG0380016141.01 | 0.802648 | 5.077424e-49 | 2.500468e-46 |
| MsG0280007667.01 | MsG0380016380.01 | -0.804553 | 2.043675e-49 | 1.056843e-46 |
| MsG0280007667.01 | MsG0380016393.01 | 0.814359 | 1.603530e-51 | 1.073636e-48 |
| MsG0280007667.01 | MsG0380016485.01 | 0.819338 | 1.224289e-52 | 9.393895e-50 |
| MsG0280007667.01 | MsG0380016567.01 | 0.820107 | 8.169090e-53 | 6.405778e-50 |
| MsG0280007667.01 | MsG0380016850.01 | 0.804454 | 2.144069e-49 | 1.105907e-46 |
| MsG0280007667.01 | MsG0380016856.01 | 0.819855 | 9.326480e-53 | 7.261181e-50 |
| MsG0280007667.01 | MsG0380016865.01 | 0.827453 | 1.551932e-54 | 1.498965e-51 |
| MsG0280007667.01 | MsG0380017128.01 | 0.803000 | 4.294304e-49 | 2.133807e-46 |
| MsG0280007667.01 | MsG0380017156.01 | 0.814953 | 1.184561e-51 | 8.059389e-49 |
| MsG0280007667.01 | MsG0380017331.01 | 0.831932 | 1.260683e-55 | 1.388416e-52 |
| MsG0280007667.01 | MsG0380017588.01 | 0.841513 | 4.539361e-58 | 6.685795e-55 |
| MsG0280007667.01 | MsG0380017594.01 | 0.808833 | 2.549759e-50 | 1.473013e-47 |
| MsG0280007667.01 | MsG0380017623.01 | 0.827434 | 1.567615e-54 | 1.513283e-51 |
| MsG0280007667.01 | MsG0380017826.01 | 0.816259 | 6.063571e-52 | 4.275790e-49 |
| MsG0280007667.01 | MsG0380017898.01 | 0.801233 | 9.919853e-49 | 4.712983e-46 |
| MsG0280007667.01 | MsG0380017967.01 | 0.858211 | 9.628902e-63 | 2.438640e-59 |
| MsG0280007667.01 | MsG0380017994.01 | 0.828304 | 9.683496e-55 | 9.587030e-52 |
| MsG0280007667.01 | MsG0380017997.01 | 0.824379 | 8.334172e-54 | 7.369455e-51 |
| MsG0280007667.01 | MsG0480018228.01 | 0.803108 | 4.079518e-49 | 2.032685e-46 |
| MsG0280007667.01 | MsG0480018767.01 | 0.862107 | 6.402908e-64 | 1.853446e-60 |
| MsG0280007667.01 | MsG0480019906.01 | 0.800657 | 1.300465e-48 | 6.089118e-46 |
| MsG0280007667.01 | MsG0480019935.01 | 0.800688 | 1.281680e-48 | 6.005681e-46 |
| MsG0280007667.01 | MsG0480020506.01 | 0.824545 | 7.618892e-54 | 6.769560e-51 |
| MsG0280007667.01 | MsG0480020537.01 | 0.831580 | 1.539698e-55 | 1.678051e-52 |
| MsG0280007667.01 | MsG0480021226.01 | 0.806702 | 7.236447e-50 | 3.954267e-47 |
| MsG0280007667.01 | MsG0480021241.01 | 0.861711 | 8.469697e-64 | 2.417979e-60 |
| MsG0280007667.01 | MsG0480021300.01 | 0.851874 | 6.677360e-61 | 1.370310e-57 |
| MsG0280007667.01 | MsG0480021977.01 | 0.843034 | 1.795654e-58 | 2.773571e-55 |
| MsG0280007667.01 | MsG0480022923.01 | 0.811206 | 7.860841e-51 | 4.836314e-48 |
| MsG0280007667.01 | MsG0480023064.01 | 0.817746 | 2.810474e-52 | 2.064153e-49 |
| MsG0280007667.01 | MsG0480023188.01 | 0.816881 | 4.400473e-52 | 3.156199e-49 |
| MsG0280007667.01 | MsG0480023322.01 | 0.833439 | 5.330495e-56 | 6.139108e-53 |
| MsG0280007667.01 | MsG0480023324.01 | 0.822223 | 2.657762e-53 | 2.210877e-50 |
| MsG0280007667.01 | MsG0480023414.01 | 0.813866 | 2.060310e-51 | 1.361176e-48 |
| MsG0280007667.01 | MsG0480023484.01 | 0.806126 | 9.572279e-50 | 5.154437e-47 |
| MsG0280007667.01 | MsG0480023698.01 | 0.824584 | 7.456766e-54 | 6.633432e-51 |
| MsG0280007667.01 | MsG0480023706.01 | 0.820556 | 6.445542e-53 | 5.116684e-50 |
| MsG0280007667.01 | MsG0480023944.01 | 0.868487 | 6.295439e-66 | 2.281277e-62 |
| MsG0280007667.01 | MsG0580024119.01 | 0.823466 | 1.364543e-53 | 1.175808e-50 |
| MsG0280007667.01 | MsG0580025153.01 | -0.806319 | 8.712965e-50 | 4.714876e-47 |
| MsG0280007667.01 | MsG0580025464.01 | 0.812144 | 4.914873e-51 | 3.100318e-48 |
| MsG0280007667.01 | MsG0580025633.01 | 0.813482 | 2.503281e-51 | 1.636759e-48 |
| MsG0280007667.01 | MsG0580026343.01 | 0.812786 | 3.557652e-51 | 2.282714e-48 |
| MsG0280007667.01 | MsG0580026446.01 | 0.810223 | 1.282880e-50 | 7.688873e-48 |
| MsG0280007667.01 | MsG0580028302.01 | 0.860024 | 2.756161e-63 | 7.427975e-60 |
| MsG0280007667.01 | MsG0580028330.01 | 0.820654 | 6.119617e-53 | 4.870785e-50 |
| MsG0280007667.01 | MsG0580030141.01 | 0.809560 | 1.781361e-50 | 1.049304e-47 |
| MsG0280007667.01 | MsG0580030179.01 | 0.818320 | 2.084028e-52 | 1.554910e-49 |
| MsG0280007667.01 | MsG0680030296.01 | 0.828478 | 8.792947e-55 | 8.750157e-52 |
| MsG0280007667.01 | MsG0680031117.01 | 0.818434 | 1.964647e-52 | 1.470550e-49 |
| MsG0280007667.01 | MsG0680031686.01 | 0.822534 | 2.250369e-53 | 1.888818e-50 |
| MsG0280007667.01 | MsG0680034415.01 | 0.818891 | 1.547156e-52 | 1.172758e-49 |
| MsG0280007667.01 | MsG0680035650.01 | 0.816513 | 5.320476e-52 | 3.777643e-49 |
| MsG0280007667.01 | MsG0780036480.01 | 0.826060 | 3.336681e-54 | 3.095704e-51 |
| MsG0280007667.01 | MsG0780036553.01 | 0.811783 | 5.890902e-51 | 3.679801e-48 |
| MsG0280007667.01 | MsG0780036793.01 | 0.800284 | 1.549476e-48 | 7.186767e-46 |
| MsG0280007667.01 | MsG0780038393.01 | 0.841520 | 4.520802e-58 | 6.659911e-55 |
| MsG0280007667.01 | MsG0780038647.01 | 0.834024 | 3.805745e-56 | 4.460576e-53 |
| MsG0280007667.01 | MsG0780038810.01 | 0.822977 | 1.774467e-53 | 1.508177e-50 |
| MsG0280007667.01 | MsG0780039234.01 | 0.827066 | 1.920797e-54 | 1.834280e-51 |
| MsG0280007667.01 | MsG0780039803.01 | 0.802644 | 5.086545e-49 | 2.504719e-46 |
| MsG0280007667.01 | MsG0780039916.01 | 0.828799 | 7.353135e-55 | 7.385536e-52 |
| MsG0280007667.01 | MsG0780040118.01 | 0.845662 | 3.531496e-59 | 5.928229e-56 |
| MsG0280007667.01 | MsG0780040560.01 | 0.819639 | 1.045280e-52 | 8.088763e-50 |
| MsG0280007667.01 | MsG0780040978.01 | 0.872175 | 3.890560e-67 | 1.612066e-63 |
| MsG0280007667.01 | MsG0780040990.01 | 0.876161 | 1.739534e-68 | 8.347624e-65 |
| MsG0280007667.01 | MsG0780041180.01 | 0.836904 | 7.117632e-57 | 9.096426e-54 |
| MsG0280007667.01 | MsG0780041354.01 | 0.864173 | 1.470544e-64 | 4.574148e-61 |
| MsG0280007667.01 | MsG0780041397.01 | 0.826843 | 2.171416e-54 | 2.060087e-51 |
| MsG0280007667.01 | MsG0780041436.01 | 0.801550 | 8.540962e-49 | 4.090288e-46 |
| MsG0280007667.01 | MsG0780041439.01 | 0.862009 | 6.861400e-64 | 1.979263e-60 |
| MsG0280007667.01 | MsG0780041548.01 | 0.803602 | 3.223171e-49 | 1.626615e-46 |
| MsG0280007667.01 | MsG0780041591.01 | 0.815519 | 8.868713e-52 | 6.128420e-49 |
| MsG0280007667.01 | MsG0880042122.01 | 0.811093 | 8.319846e-51 | 5.103357e-48 |
| MsG0280007667.01 | MsG0880042635.01 | 0.808942 | 2.416471e-50 | 1.400056e-47 |
| MsG0280007667.01 | MsG0880042833.01 | 0.809089 | 2.247773e-50 | 1.307524e-47 |
| MsG0280007667.01 | MsG0880043684.01 | 0.819866 | 9.272166e-53 | 7.221119e-50 |
| MsG0280007667.01 | MsG0880044139.01 | 0.820735 | 5.861372e-53 | 4.676042e-50 |
| MsG0280007667.01 | MsG0880044356.01 | 0.875475 | 2.992249e-68 | 1.398729e-64 |
| MsG0280007667.01 | MsG0880045356.01 | 0.820426 | 6.901949e-53 | 5.459646e-50 |
| MsG0280007667.01 | MsG0880045439.01 | 0.844539 | 7.100017e-59 | 1.149930e-55 |
| MsG0280007667.01 | MsG0880045503.01 | 0.823482 | 1.353025e-53 | 1.166425e-50 |
| MsG0280007667.01 | MsG0880045553.01 | 0.826935 | 2.064458e-54 | 1.964015e-51 |
| MsG0280007667.01 | MsG0880045584.01 | 0.846600 | 1.961455e-59 | 3.393938e-56 |
| MsG0280007667.01 | MsG0880045589.01 | 0.810238 | 1.272892e-50 | 7.632565e-48 |
| MsG0280007667.01 | MsG0880045647.01 | 0.809018 | 2.328041e-50 | 1.351568e-47 |
| MsG0280007667.01 | MsG0880045852.01 | 0.803971 | 2.701582e-49 | 1.376379e-46 |
| MsG0280007667.01 | MsG0880045949.01 | 0.850137 | 2.061861e-60 | 3.998933e-57 |
| MsG0280007667.01 | MsG0880045963.01 | 0.880636 | 4.663164e-70 | 2.649141e-66 |
| MsG0280007667.01 | MsG0880046010.01 | -0.830045 | 3.662639e-55 | 3.815228e-52 |
| MsG0280007667.01 | MsG0880046137.01 | 0.802320 | 5.934068e-49 | 2.898266e-46 |
| MsG0280007667.01 | MsG0880046906.01 | 0.831610 | 1.514366e-55 | 1.651840e-52 |
| MsG0280007667.01 | MsG0880046945.01 | 0.825923 | 3.597344e-54 | 3.324656e-51 |
| MsG0280007667.01 | MsG0880047057.01 | 0.836124 | 1.124870e-56 | 1.404280e-53 |
| MsG0280007667.01 | MsG0880047414.01 | 0.813435 | 2.563726e-51 | 1.674114e-48 |
| MsG0280007667.01 | MsG0880047631.01 | 0.835261 | 1.860374e-56 | 2.263076e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007667.01.T01 | MTR_2g029510 | 97.039 | 439 | 11 | 1 | 1 | 437 | 1 | 439 | 0.0 | 860 |
| MsG0280007667.01.T01 | MTR_1g095165 | 45.788 | 463 | 196 | 12 | 9 | 417 | 1 | 462 | 4.97e-133 | 391 |
| MsG0280007667.01.T01 | MTR_0368s0010 | 49.147 | 293 | 117 | 8 | 157 | 417 | 6 | 298 | 1.73e-89 | 274 |
| MsG0280007667.01.T01 | MTR_1g072190 | 36.697 | 436 | 191 | 10 | 22 | 431 | 1 | 377 | 1.77e-77 | 246 |
| MsG0280007667.01.T01 | MTR_7g094940 | 38.875 | 391 | 190 | 11 | 22 | 394 | 1 | 360 | 9.28e-75 | 239 |
| MsG0280007667.01.T01 | MTR_5g017680 | 30.548 | 347 | 187 | 15 | 67 | 365 | 10 | 350 | 1.21e-27 | 114 |
| MsG0280007667.01.T01 | MTR_5g017670 | 30.857 | 350 | 179 | 17 | 67 | 365 | 16 | 353 | 8.07e-27 | 111 |
| MsG0280007667.01.T01 | MTR_1g019940 | 26.603 | 421 | 238 | 16 | 52 | 420 | 6 | 407 | 7.27e-24 | 103 |
| MsG0280007667.01.T01 | MTR_1g019940 | 26.887 | 424 | 231 | 18 | 52 | 420 | 6 | 405 | 3.73e-23 | 101 |
| MsG0280007667.01.T01 | MTR_3g101410 | 28.065 | 367 | 210 | 16 | 84 | 401 | 36 | 397 | 4.18e-23 | 100 |
| MsG0280007667.01.T01 | MTR_8g007065 | 27.913 | 369 | 226 | 17 | 67 | 400 | 32 | 395 | 9.09e-23 | 100 |
| MsG0280007667.01.T01 | MTR_8g007040 | 25.455 | 385 | 245 | 13 | 67 | 415 | 32 | 410 | 2.71e-22 | 99.0 |
| MsG0280007667.01.T01 | MTR_8g007090 | 28.919 | 370 | 223 | 15 | 67 | 400 | 32 | 397 | 3.95e-22 | 98.6 |
| MsG0280007667.01.T01 | MTR_3g101400 | 27.100 | 369 | 211 | 17 | 84 | 401 | 36 | 397 | 9.88e-22 | 97.1 |
| MsG0280007667.01.T01 | MTR_8g007095 | 28.378 | 370 | 225 | 15 | 67 | 400 | 32 | 397 | 1.28e-20 | 94.0 |
| MsG0280007667.01.T01 | MTR_8g007125 | 27.507 | 349 | 212 | 13 | 87 | 400 | 51 | 393 | 3.63e-20 | 92.4 |
| MsG0280007667.01.T01 | MTR_8g007140 | 28.070 | 342 | 208 | 14 | 87 | 400 | 52 | 383 | 1.52e-19 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007667.01.T01 | AT3G54950 | 48.630 | 438 | 196 | 7 | 2 | 412 | 32 | 467 | 2.09e-135 | 398 |
| MsG0280007667.01.T01 | AT2G39220 | 47.511 | 442 | 183 | 7 | 19 | 412 | 40 | 480 | 8.67e-131 | 387 |
| MsG0280007667.01.T01 | AT4G29800 | 42.333 | 463 | 201 | 8 | 15 | 412 | 43 | 504 | 4.25e-113 | 342 |
| MsG0280007667.01.T01 | AT4G29800 | 42.241 | 464 | 201 | 9 | 15 | 412 | 43 | 505 | 2.92e-111 | 337 |
| MsG0280007667.01.T01 | AT3G63200 | 42.494 | 393 | 171 | 10 | 22 | 394 | 3 | 360 | 7.91e-87 | 270 |
| MsG0280007667.01.T01 | AT4G37060 | 30.130 | 385 | 217 | 18 | 67 | 403 | 19 | 399 | 1.01e-28 | 117 |
| MsG0280007667.01.T01 | AT2G26560 | 29.815 | 379 | 218 | 15 | 67 | 400 | 19 | 394 | 8.19e-26 | 108 |
| MsG0280007667.01.T01 | AT4G37070 | 28.385 | 384 | 220 | 17 | 67 | 401 | 19 | 396 | 2.20e-24 | 104 |
| MsG0280007667.01.T01 | AT4G37060 | 27.952 | 415 | 218 | 19 | 67 | 403 | 19 | 430 | 1.19e-23 | 103 |
| MsG0280007667.01.T01 | AT4G37070 | 28.649 | 370 | 209 | 17 | 67 | 387 | 19 | 382 | 2.71e-23 | 101 |
| MsG0280007667.01.T01 | AT4G37070 | 28.649 | 370 | 209 | 17 | 67 | 387 | 19 | 382 | 2.71e-23 | 101 |
| MsG0280007667.01.T01 | AT4G37050 | 28.032 | 371 | 209 | 16 | 87 | 402 | 54 | 421 | 3.51e-23 | 101 |
| MsG0280007667.01.T01 | AT5G43590 | 27.778 | 288 | 168 | 10 | 87 | 336 | 33 | 318 | 1.04e-20 | 94.0 |
| MsG0280007667.01.T01 | AT5G43590 | 27.778 | 288 | 168 | 10 | 87 | 336 | 100 | 385 | 2.17e-20 | 93.6 |
| MsG0280007667.01.T01 | AT4G37070 | 27.297 | 370 | 203 | 17 | 67 | 387 | 19 | 371 | 3.22e-19 | 89.4 |
Find 124 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACGAAATCTTCTCCATTT+TGG | 0.144885 | 2:+18914133 | MsG0280007667.01.T01:CDS |
| GTTGAGTCAGTCTTATTTAA+AGG | 0.208877 | 2:+18915481 | MsG0280007667.01.T01:CDS |
| ATCGGATTTGGTGGCGGTTT+CGG | 0.267788 | 2:+18915435 | MsG0280007667.01.T01:CDS |
| TTGGAAAACAAATTCTTATT+CGG | 0.286942 | 2:+18914152 | MsG0280007667.01.T01:CDS |
| TGTATGTTGGTTGTTGAAAA+TGG | 0.288958 | 2:-18913955 | None:intergenic |
| AAACTTAATGTCTTGTGGTT+TGG | 0.311079 | 2:+18915801 | MsG0280007667.01.T01:three_prime_UTR |
| AACTTAATGTCTTGTGGTTT+GGG | 0.312323 | 2:+18915802 | MsG0280007667.01.T01:three_prime_UTR |
| GATTTCTTCGACGCCGTTGC+TGG | 0.312723 | 2:+18914368 | MsG0280007667.01.T01:CDS |
| GGTAGGTTGTAGTAATATTA+AGG | 0.321641 | 2:-18915881 | None:intergenic |
| TTAGACAAATTGAAATTGTT+TGG | 0.328034 | 2:+18915529 | MsG0280007667.01.T01:CDS |
| GTGATAGTGATTTGTTCATA+TGG | 0.342580 | 2:+18915970 | MsG0280007667.01.T01:three_prime_UTR |
| GTTTGGTGGAGAGTTGATTA+AGG | 0.342805 | 2:+18915546 | MsG0280007667.01.T01:CDS |
| GCAGAGAATTCTGACTTTCC+CGG | 0.367032 | 2:-18914240 | None:intergenic |
| GTCCTAGGAGATGAAGTTCT+AGG | 0.368900 | 2:-18915631 | None:intergenic |
| TCAGGTTTCGTGAGAATTGC+CGG | 0.370289 | 2:+18914947 | MsG0280007667.01.T01:CDS |
| AAGAAAAGAGGAAGATTAGT+AGG | 0.373541 | 2:+18915716 | MsG0280007667.01.T01:three_prime_UTR |
| AACAGAATTTCCCGACGATC+GGG | 0.375905 | 2:+18914497 | MsG0280007667.01.T01:CDS |
| GGGGAAAACCACATCGGATT+TGG | 0.391408 | 2:+18915423 | MsG0280007667.01.T01:CDS |
| GAGGATGCCGTCGGTGTAAC+CGG | 0.403495 | 2:-18914273 | None:intergenic |
| AATATGAGAGTTACTGTTAC+CGG | 0.409853 | 2:-18914342 | None:intergenic |
| CCAACTGTTGTGTTGAAGAA+TGG | 0.412565 | 2:+18915598 | MsG0280007667.01.T01:CDS |
| TTCGACGCCGTTGCTGGCTC+CGG | 0.416327 | 2:+18914374 | MsG0280007667.01.T01:CDS |
| TAACGGTGTTTCTGATTTGT+TGG | 0.422061 | 2:+18914874 | MsG0280007667.01.T01:CDS |
| AAGTTCAAGTTGTTGTTCAT+TGG | 0.424195 | 2:-18914071 | None:intergenic |
| TCTTTCTGAGGCAGGATTCA+AGG | 0.424873 | 2:-18914316 | None:intergenic |
| GATTTGTTGGTGCTTTCTCT+TGG | 0.427963 | 2:+18914887 | MsG0280007667.01.T01:CDS |
| CAAGCTGTATCAATGGCATT+TGG | 0.428031 | 2:+18915328 | MsG0280007667.01.T01:CDS |
| TTTCTCACCGGAAACAAAAT+CGG | 0.433911 | 2:+18914535 | MsG0280007667.01.T01:CDS |
| ACCGGATTTCTTTCTGAGGC+AGG | 0.435141 | 2:-18914324 | None:intergenic |
| TATGTGCGGATTCAATCAAA+TGG | 0.437366 | 2:+18915370 | MsG0280007667.01.T01:CDS |
| CGGTGAAGGAGCTTCCGATA+TGG | 0.438606 | 2:+18914967 | MsG0280007667.01.T01:CDS |
| CCCGACGATCGGGGATTCTC+CGG | 0.439862 | 2:+18914507 | MsG0280007667.01.T01:CDS |
| TTCATATGGGTATTGTCAAA+AGG | 0.445205 | 2:+18915984 | MsG0280007667.01.T01:three_prime_UTR |
| ACGAAGATCTTAGCCGTTGA+TGG | 0.448292 | 2:+18914776 | MsG0280007667.01.T01:CDS |
| GAAACCTGAGGGAGACTTAA+CGG | 0.454179 | 2:-18914933 | None:intergenic |
| TGATAGTGATTTGTTCATAT+GGG | 0.456559 | 2:+18915971 | MsG0280007667.01.T01:three_prime_UTR |
| CCGGAGAATCCCCGATCGTC+GGG | 0.457645 | 2:-18914507 | None:intergenic |
| GAAAGAGAGAATTTGTATGT+TGG | 0.458611 | 2:-18913968 | None:intergenic |
| TCGTAGCAGGGAATTAAAAT+CGG | 0.459582 | 2:-18914611 | None:intergenic |
| GCCGTTGCTGGCTCCGGTGT+CGG | 0.460782 | 2:+18914380 | MsG0280007667.01.T01:CDS |
| GTCAGAATTCTCTGCATTGA+CGG | 0.462797 | 2:+18914248 | MsG0280007667.01.T01:CDS |
| GCGCGTGACGAGATCGTAGC+AGG | 0.470309 | 2:-18914624 | None:intergenic |
| TCCTAGGAGATGAAGTTCTA+GGG | 0.478439 | 2:-18915630 | None:intergenic |
| AAGGTAAACAAAGGGAAGAC+GGG | 0.479023 | 2:+18915403 | MsG0280007667.01.T01:CDS |
| GGCGGTTTCGGAGGAGATGT+TGG | 0.485077 | 2:+18915447 | MsG0280007667.01.T01:CDS |
| GACAAATTGAAATTGTTTGG+TGG | 0.485720 | 2:+18915532 | MsG0280007667.01.T01:CDS |
| TCGATGGACTTCAATTCAAT+AGG | 0.487410 | 2:-18914746 | None:intergenic |
| ATGTGCGGATTCAATCAAAT+GGG | 0.488399 | 2:+18915371 | MsG0280007667.01.T01:CDS |
| TTCAATTCAATAGGAGCCGC+TGG | 0.490050 | 2:-18914737 | None:intergenic |
| AAATGAAATAATTATAATGT+AGG | 0.494177 | 2:-18915902 | None:intergenic |
| TTCTCTTGGTAACGGAGAGT+TGG | 0.496512 | 2:+18914901 | MsG0280007667.01.T01:CDS |
| GAAATAATTATAATGTAGGT+AGG | 0.499493 | 2:-18915898 | None:intergenic |
| GGTTGTAGTAATATTAAGGA+TGG | 0.505680 | 2:-18915877 | None:intergenic |
| TTTACCACGGGTGAAAAGTA+AGG | 0.511204 | 2:-18914417 | None:intergenic |
| TTGGTGCTTTCTCTTGGTAA+CGG | 0.511918 | 2:+18914893 | MsG0280007667.01.T01:CDS |
| AACCACATCGGATTTGGTGG+CGG | 0.512460 | 2:+18915429 | MsG0280007667.01.T01:CDS |
| TAACAGAATTTCCCGACGAT+CGG | 0.515375 | 2:+18914496 | MsG0280007667.01.T01:CDS |
| GAAAACCACATCGGATTTGG+TGG | 0.517533 | 2:+18915426 | MsG0280007667.01.T01:CDS |
| GTAGTAGCTGATGAAGTCCT+AGG | 0.521279 | 2:-18915646 | None:intergenic |
| GGTTGATCAAGCTGTATCAA+TGG | 0.525148 | 2:+18915321 | MsG0280007667.01.T01:intron |
| CCCCTAGAACTTCATCTCCT+AGG | 0.526050 | 2:+18915629 | MsG0280007667.01.T01:CDS |
| AGTTGATTAAGGAAGAAGAG+AGG | 0.528571 | 2:+18915557 | MsG0280007667.01.T01:CDS |
| TTCGTGAGAATTGCCGGTGA+AGG | 0.529684 | 2:+18914953 | MsG0280007667.01.T01:CDS |
| ATCAAATGGGGTGATGGCTA+AGG | 0.530306 | 2:+18915384 | MsG0280007667.01.T01:CDS |
| AACGCCGTTAAGTCTCCCTC+AGG | 0.530840 | 2:+18914929 | MsG0280007667.01.T01:CDS |
| AGTCAGTCTTATTTAAAGGA+AGG | 0.532895 | 2:+18915485 | MsG0280007667.01.T01:CDS |
| TCCTGCCTCAGAAAGAAATC+CGG | 0.534121 | 2:+18914323 | MsG0280007667.01.T01:CDS |
| CCATTCTTCAACACAACAGT+TGG | 0.536757 | 2:-18915598 | None:intergenic |
| CATATCGGAAGCTCCTTCAC+CGG | 0.540361 | 2:-18914966 | None:intergenic |
| GCCGGAGAATCCCCGATCGT+CGG | 0.540416 | 2:-18914508 | None:intergenic |
| GGCGAGGACTCCACCGACAC+CGG | 0.540476 | 2:-18914393 | None:intergenic |
| ATTCTCTGCATTGACGGCGC+CGG | 0.540611 | 2:+18914254 | MsG0280007667.01.T01:CDS |
| GATCTTCGTCTTCCCATCGA+TGG | 0.541076 | 2:-18914762 | None:intergenic |
| TAAGGTAAACAAAGGGAAGA+CGG | 0.544495 | 2:+18915402 | MsG0280007667.01.T01:CDS |
| GAGTTTATCAACTTCGAAGT+TGG | 0.546260 | 2:-18914108 | None:intergenic |
| TCAGAAACACCGTTACAAAA+CGG | 0.547389 | 2:-18914866 | None:intergenic |
| GGATTCAACACTGCACAGCT+CGG | 0.562583 | 2:-18915856 | None:intergenic |
| GGAGATGAAGTTCTAGGGGA+GGG | 0.565558 | 2:-18915625 | None:intergenic |
| GATTTCGAGAGCGTCGGCGC+GGG | 0.567460 | 2:-18914663 | None:intergenic |
| TGAGTAACAGCAGTAGCCGT+TGG | 0.567616 | 2:-18914818 | None:intergenic |
| GATTCAATCAAATGGGGTGA+TGG | 0.569656 | 2:+18915378 | MsG0280007667.01.T01:CDS |
| GTTGCTGGCTCCGGTGTCGG+TGG | 0.572413 | 2:+18914383 | MsG0280007667.01.T01:CDS |
| ACCGACACCGGAGCCAGCAA+CGG | 0.573642 | 2:-18914381 | None:intergenic |
| CAGAAACTTCAAAGCTTCAT+CGG | 0.575680 | 2:-18914462 | None:intergenic |
| ATTGAATTGAAGTCCATCGA+TGG | 0.577788 | 2:+18914749 | MsG0280007667.01.T01:CDS |
| AGCCGCTGGATCAGCTGACG+TGG | 0.581310 | 2:-18914723 | None:intergenic |
| GACGGCGCCGGTTACACCGA+CGG | 0.582223 | 2:+18914266 | MsG0280007667.01.T01:CDS |
| GGATTTGGTGGCGGTTTCGG+AGG | 0.583638 | 2:+18915438 | MsG0280007667.01.T01:CDS |
| AAGGTGAGAGAGTGATTTCG+CGG | 0.586435 | 2:-18914297 | None:intergenic |
| CATCGCAACACCTCCATCAA+CGG | 0.587463 | 2:-18914789 | None:intergenic |
| AGGAGATGAAGTTCTAGGGG+AGG | 0.591108 | 2:-18915626 | None:intergenic |
| TTGAATTGAAGTCCATCGAT+GGG | 0.595371 | 2:+18914750 | MsG0280007667.01.T01:CDS |
| AGGTAATCCGTCTTTACCAC+GGG | 0.595561 | 2:-18914429 | None:intergenic |
| ACAGAATTTCCCGACGATCG+GGG | 0.599858 | 2:+18914498 | MsG0280007667.01.T01:CDS |
| ATCGTCGGGAAATTCTGTTA+CGG | 0.601025 | 2:-18914493 | None:intergenic |
| CTTTCTTAATCGATCTCAAG+CGG | 0.617258 | 2:-18915832 | None:intergenic |
| CCTAGGAGATGAAGTTCTAG+GGG | 0.628375 | 2:-18915629 | None:intergenic |
| TGCCACGTCAGCTGATCCAG+CGG | 0.628488 | 2:+18914721 | MsG0280007667.01.T01:CDS |
| CGCGTGACGAGATCGTAGCA+GGG | 0.629024 | 2:-18914623 | None:intergenic |
| AAGATCTTAGCCGTTGATGG+AGG | 0.638110 | 2:+18914779 | MsG0280007667.01.T01:CDS |
| TTTCGCGGCGAGGATGCCGT+CGG | 0.641184 | 2:-18914282 | None:intergenic |
| GCAATTCTCACGAAACCTGA+GGG | 0.641382 | 2:-18914944 | None:intergenic |
| GTAGATTGAACAATTATGTG+CGG | 0.642262 | 2:+18915356 | MsG0280007667.01.T01:CDS |
| GGCAATTCTCACGAAACCTG+AGG | 0.645971 | 2:-18914945 | None:intergenic |
| GAGGTAATCCGTCTTTACCA+CGG | 0.646558 | 2:-18914430 | None:intergenic |
| ACCGTCGATTTCGAGAGCGT+CGG | 0.652715 | 2:-18914669 | None:intergenic |
| TGTTACCGGATTTCTTTCTG+AGG | 0.653122 | 2:-18914328 | None:intergenic |
| GTGATGGCTAAGGTAAACAA+AGG | 0.654646 | 2:+18915394 | MsG0280007667.01.T01:CDS |
| CGATTTCGAGAGCGTCGGCG+CGG | 0.655501 | 2:-18914664 | None:intergenic |
| TGATGGCTAAGGTAAACAAA+GGG | 0.662128 | 2:+18915395 | MsG0280007667.01.T01:CDS |
| ATTTAAAGGAAGGAAGATCG+TGG | 0.667169 | 2:+18915495 | MsG0280007667.01.T01:CDS |
| TCGGCGCGGGAGAAAACGAA+CGG | 0.671166 | 2:-18914650 | None:intergenic |
| GCCGACGCTCTCGAAATCGA+CGG | 0.676469 | 2:+18914668 | MsG0280007667.01.T01:CDS |
| GGGTGAAAAGTAAGGCGGCG+AGG | 0.686118 | 2:-18914409 | None:intergenic |
| GCTTCATCGGCAGTGAACAG+AGG | 0.690278 | 2:-18914449 | None:intergenic |
| TTTCCGGTGAGAAAACTCGC+CGG | 0.691056 | 2:-18914526 | None:intergenic |
| AACCGCCACCAAATCCGATG+TGG | 0.694040 | 2:-18915431 | None:intergenic |
| TGTTGCGATGAACAATCCAA+CGG | 0.695987 | 2:+18914802 | MsG0280007667.01.T01:CDS |
| ACCACGGGTGAAAAGTAAGG+CGG | 0.698481 | 2:-18914414 | None:intergenic |
| AGGTAAACAAAGGGAAGACG+GGG | 0.704588 | 2:+18915404 | MsG0280007667.01.T01:CDS |
| TGTGCGGATTCAATCAAATG+GGG | 0.705308 | 2:+18915372 | MsG0280007667.01.T01:CDS |
| GAGAGAGTGATTTCGCGGCG+AGG | 0.707647 | 2:-18914292 | None:intergenic |
| GAGAATTCTGACTTTCCCGG+CGG | 0.726321 | 2:-18914237 | None:intergenic |
| GAAGACGGGGAAAACCACAT+CGG | 0.743605 | 2:+18915417 | MsG0280007667.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAATAATTATAATGT+AGG | - | Chr2:18915905-18915924 | None:intergenic | 10.0% |
| !! | AAAATAATTCGAAATTGAAT+CGG | + | Chr2:18915114-18915133 | MsG0280007667.01.T01:intron | 15.0% |
| !! | ATGAATGAATATTATAATGT+AGG | + | Chr2:18915300-18915319 | MsG0280007667.01.T01:intron | 15.0% |
| !!! | TAAAAATTAGATTTTGTTGT+GGG | + | Chr2:18915748-18915767 | MsG0280007667.01.T01:three_prime_UTR | 15.0% |
| !!! | TTTTTATCTTTGTTTAGTTT+TGG | + | Chr2:18915927-18915946 | MsG0280007667.01.T01:three_prime_UTR | 15.0% |
| !! | GAAATAATTATAATGTAGGT+AGG | - | Chr2:18915901-18915920 | None:intergenic | 20.0% |
| !! | TTAGACAAATTGAAATTGTT+TGG | + | Chr2:18915529-18915548 | MsG0280007667.01.T01:CDS | 20.0% |
| !! | TTGGAAAACAAATTCTTATT+CGG | + | Chr2:18914152-18914171 | MsG0280007667.01.T01:CDS | 20.0% |
| !!! | CTAAAAATTAGATTTTGTTG+TGG | + | Chr2:18915747-18915766 | MsG0280007667.01.T01:three_prime_UTR | 20.0% |
| !!! | GAATTTTTTTCTTACCATAT+CGG | - | Chr2:18914984-18915003 | None:intergenic | 20.0% |
| !!! | TAAGAATTTGTTTTCCAAAA+TGG | - | Chr2:18914150-18914169 | None:intergenic | 20.0% |
| ! | AACTCAAATTGCAGAAAAAA+TGG | + | Chr2:18914031-18914050 | MsG0280007667.01.T01:exon | 25.0% |
| ! | AAGAAGACAAAAAAGAAAAG+AGG | + | Chr2:18915704-18915723 | MsG0280007667.01.T01:three_prime_UTR | 25.0% |
| ! | ATTTGTAGTGAATAATGAGT+AGG | + | Chr2:18915224-18915243 | MsG0280007667.01.T01:intron | 25.0% |
| ! | TAATGAGTAGGTCTAATTAT+TGG | + | Chr2:18915236-18915255 | MsG0280007667.01.T01:intron | 25.0% |
| !!! | AGAATGTGTTTGTTTTTGTT+AGG | - | Chr2:18915176-18915195 | None:intergenic | 25.0% |
| !!! | TGATAGTGATTTGTTCATAT+GGG | + | Chr2:18915971-18915990 | MsG0280007667.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTTGAAACTTAATGTCTTG+TGG | + | Chr2:18915796-18915815 | MsG0280007667.01.T01:three_prime_UTR | 25.0% |
| AAACTTAATGTCTTGTGGTT+TGG | + | Chr2:18915801-18915820 | MsG0280007667.01.T01:three_prime_UTR | 30.0% | |
| AACTTAATGTCTTGTGGTTT+GGG | + | Chr2:18915802-18915821 | MsG0280007667.01.T01:three_prime_UTR | 30.0% | |
| AAGAAAAGAGGAAGATTAGT+AGG | + | Chr2:18915716-18915735 | MsG0280007667.01.T01:three_prime_UTR | 30.0% | |
| AATATGAGAGTTACTGTTAC+CGG | - | Chr2:18914345-18914364 | None:intergenic | 30.0% | |
| ATAATTCGAAATTGAATCGG+TGG | + | Chr2:18915117-18915136 | MsG0280007667.01.T01:intron | 30.0% | |
| GAAAGAGAGAATTTGTATGT+TGG | - | Chr2:18913971-18913990 | None:intergenic | 30.0% | |
| GACAAATTGAAATTGTTTGG+TGG | + | Chr2:18915532-18915551 | MsG0280007667.01.T01:CDS | 30.0% | |
| GGTAGGTTGTAGTAATATTA+AGG | - | Chr2:18915884-18915903 | None:intergenic | 30.0% | |
| GGTTGTAGTAATATTAAGGA+TGG | - | Chr2:18915880-18915899 | None:intergenic | 30.0% | |
| GTAGATTGAACAATTATGTG+CGG | + | Chr2:18915356-18915375 | MsG0280007667.01.T01:CDS | 30.0% | |
| TCAAATTGCAGAAAAAATGG+CGG | + | Chr2:18914034-18914053 | MsG0280007667.01.T01:exon | 30.0% | |
| ! | AAGCTTTTCCGAAAAACATT+CGG | + | Chr2:18914560-18914579 | MsG0280007667.01.T01:CDS | 30.0% |
| ! | ATACGAAATCTTCTCCATTT+TGG | + | Chr2:18914133-18914152 | MsG0280007667.01.T01:CDS | 30.0% |
| ! | CAAAAGGTGAATTTTGTACA+AGG | + | Chr2:18916000-18916019 | MsG0280007667.01.T01:three_prime_UTR | 30.0% |
| ! | TGTATGTTGGTTGTTGAAAA+TGG | - | Chr2:18913958-18913977 | None:intergenic | 30.0% |
| ! | TTCATATGGGTATTGTCAAA+AGG | + | Chr2:18915984-18916003 | MsG0280007667.01.T01:three_prime_UTR | 30.0% |
| !! | AAGTTCAAGTTGTTGTTCAT+TGG | - | Chr2:18914074-18914093 | None:intergenic | 30.0% |
| !! | AGTCAGTCTTATTTAAAGGA+AGG | + | Chr2:18915485-18915504 | MsG0280007667.01.T01:CDS | 30.0% |
| !! | GTGATAGTGATTTGTTCATA+TGG | + | Chr2:18915970-18915989 | MsG0280007667.01.T01:three_prime_UTR | 30.0% |
| !! | GTTGAGTCAGTCTTATTTAA+AGG | + | Chr2:18915481-18915500 | MsG0280007667.01.T01:CDS | 30.0% |
| !!! | TTTTTCTGCAATTTGAGTTG+AGG | - | Chr2:18914030-18914049 | None:intergenic | 30.0% |
| AGTTGATTAAGGAAGAAGAG+AGG | + | Chr2:18915557-18915576 | MsG0280007667.01.T01:CDS | 35.0% | |
| ATGTGCGGATTCAATCAAAT+GGG | + | Chr2:18915371-18915390 | MsG0280007667.01.T01:CDS | 35.0% | |
| ATTGAATTGAAGTCCATCGA+TGG | + | Chr2:18914749-18914768 | MsG0280007667.01.T01:CDS | 35.0% | |
| ATTTAAAGGAAGGAAGATCG+TGG | + | Chr2:18915495-18915514 | MsG0280007667.01.T01:CDS | 35.0% | |
| CAGAAACTTCAAAGCTTCAT+CGG | - | Chr2:18914465-18914484 | None:intergenic | 35.0% | |
| CTTTCTTAATCGATCTCAAG+CGG | - | Chr2:18915835-18915854 | None:intergenic | 35.0% | |
| GAGTTTATCAACTTCGAAGT+TGG | - | Chr2:18914111-18914130 | None:intergenic | 35.0% | |
| TAAGGTAAACAAAGGGAAGA+CGG | + | Chr2:18915402-18915421 | MsG0280007667.01.T01:CDS | 35.0% | |
| TATGTGCGGATTCAATCAAA+TGG | + | Chr2:18915370-18915389 | MsG0280007667.01.T01:CDS | 35.0% | |
| TCAGAAACACCGTTACAAAA+CGG | - | Chr2:18914869-18914888 | None:intergenic | 35.0% | |
| TCGTAGCAGGGAATTAAAAT+CGG | - | Chr2:18914614-18914633 | None:intergenic | 35.0% | |
| TGATGGCTAAGGTAAACAAA+GGG | + | Chr2:18915395-18915414 | MsG0280007667.01.T01:CDS | 35.0% | |
| TTGAATTGAAGTCCATCGAT+GGG | + | Chr2:18914750-18914769 | MsG0280007667.01.T01:CDS | 35.0% | |
| TTTCTCACCGGAAACAAAAT+CGG | + | Chr2:18914535-18914554 | MsG0280007667.01.T01:CDS | 35.0% | |
| ! | AAGCGAATTCTTCGCATTTT+CGG | - | Chr2:18914189-18914208 | None:intergenic | 35.0% |
| ! | CATGAGTTTCCGTTTTGTAA+CGG | + | Chr2:18914857-18914876 | MsG0280007667.01.T01:CDS | 35.0% |
| ! | TAACGGTGTTTCTGATTTGT+TGG | + | Chr2:18914874-18914893 | MsG0280007667.01.T01:CDS | 35.0% |
| ! | TCGATGGACTTCAATTCAAT+AGG | - | Chr2:18914749-18914768 | None:intergenic | 35.0% |
| ! | TGCATTCTCCGAATGTTTTT+CGG | - | Chr2:18914571-18914590 | None:intergenic | 35.0% |
| AAGGTAAACAAAGGGAAGAC+GGG | + | Chr2:18915403-18915422 | MsG0280007667.01.T01:CDS | 40.0% | |
| ATCGTCGGGAAATTCTGTTA+CGG | - | Chr2:18914496-18914515 | None:intergenic | 40.0% | |
| CAAGCTGTATCAATGGCATT+TGG | + | Chr2:18915328-18915347 | MsG0280007667.01.T01:CDS | 40.0% | |
| CCAACTGTTGTGTTGAAGAA+TGG | + | Chr2:18915598-18915617 | MsG0280007667.01.T01:CDS | 40.0% | |
| CCATTCTTCAACACAACAGT+TGG | - | Chr2:18915601-18915620 | None:intergenic | 40.0% | |
| GATTCAATCAAATGGGGTGA+TGG | + | Chr2:18915378-18915397 | MsG0280007667.01.T01:CDS | 40.0% | |
| GGTTGATCAAGCTGTATCAA+TGG | + | Chr2:18915321-18915340 | MsG0280007667.01.T01:intron | 40.0% | |
| GTCAGAATTCTCTGCATTGA+CGG | + | Chr2:18914248-18914267 | MsG0280007667.01.T01:CDS | 40.0% | |
| GTGATGGCTAAGGTAAACAA+AGG | + | Chr2:18915394-18915413 | MsG0280007667.01.T01:CDS | 40.0% | |
| TAACAGAATTTCCCGACGAT+CGG | + | Chr2:18914496-18914515 | MsG0280007667.01.T01:CDS | 40.0% | |
| TCCTAGGAGATGAAGTTCTA+GGG | - | Chr2:18915633-18915652 | None:intergenic | 40.0% | |
| TGAATCGGTGGTTACTAGTT+AGG | + | Chr2:18915129-18915148 | MsG0280007667.01.T01:intron | 40.0% | |
| TGTGCGGATTCAATCAAATG+GGG | + | Chr2:18915372-18915391 | MsG0280007667.01.T01:CDS | 40.0% | |
| TGTTACCGGATTTCTTTCTG+AGG | - | Chr2:18914331-18914350 | None:intergenic | 40.0% | |
| TGTTGCGATGAACAATCCAA+CGG | + | Chr2:18914802-18914821 | MsG0280007667.01.T01:CDS | 40.0% | |
| TTTACCACGGGTGAAAAGTA+AGG | - | Chr2:18914420-18914439 | None:intergenic | 40.0% | |
| ! | GTTTGGTGGAGAGTTGATTA+AGG | + | Chr2:18915546-18915565 | MsG0280007667.01.T01:CDS | 40.0% |
| ! | TTGGTGCTTTCTCTTGGTAA+CGG | + | Chr2:18914893-18914912 | MsG0280007667.01.T01:CDS | 40.0% |
| !! | AGCTTCTCCGATTTTGTTTC+CGG | - | Chr2:18914545-18914564 | None:intergenic | 40.0% |
| !! | ATTCTTCGCATTTTCGGTGT+CGG | - | Chr2:18914183-18914202 | None:intergenic | 40.0% |
| !! | GATTTGTTGGTGCTTTCTCT+TGG | + | Chr2:18914887-18914906 | MsG0280007667.01.T01:CDS | 40.0% |
| AACAGAATTTCCCGACGATC+GGG | + | Chr2:18914497-18914516 | MsG0280007667.01.T01:CDS | 45.0% | |
| AAGGTGAGAGAGTGATTTCG+CGG | - | Chr2:18914300-18914319 | None:intergenic | 45.0% | |
| ACGAAGATCTTAGCCGTTGA+TGG | + | Chr2:18914776-18914795 | MsG0280007667.01.T01:CDS | 45.0% | |
| AGGTAAACAAAGGGAAGACG+GGG | + | Chr2:18915404-18915423 | MsG0280007667.01.T01:CDS | 45.0% | |
| AGGTAATCCGTCTTTACCAC+GGG | - | Chr2:18914432-18914451 | None:intergenic | 45.0% | |
| GAAAACCACATCGGATTTGG+TGG | + | Chr2:18915426-18915445 | MsG0280007667.01.T01:CDS | 45.0% | |
| GAAACCTGAGGGAGACTTAA+CGG | - | Chr2:18914936-18914955 | None:intergenic | 45.0% | |
| GAGGTAATCCGTCTTTACCA+CGG | - | Chr2:18914433-18914452 | None:intergenic | 45.0% | |
| GCAATTCTCACGAAACCTGA+GGG | - | Chr2:18914947-18914966 | None:intergenic | 45.0% | |
| GCAGAGAATTCTGACTTTCC+CGG | - | Chr2:18914243-18914262 | None:intergenic | 45.0% | |
| GTAGTAGCTGATGAAGTCCT+AGG | - | Chr2:18915649-18915668 | None:intergenic | 45.0% | |
| GTCCTAGGAGATGAAGTTCT+AGG | - | Chr2:18915634-18915653 | None:intergenic | 45.0% | |
| TCAGGTTTCGTGAGAATTGC+CGG | + | Chr2:18914947-18914966 | MsG0280007667.01.T01:CDS | 45.0% | |
| TCCTGCCTCAGAAAGAAATC+CGG | + | Chr2:18914323-18914342 | MsG0280007667.01.T01:CDS | 45.0% | |
| TTCAATTCAATAGGAGCCGC+TGG | - | Chr2:18914740-18914759 | None:intergenic | 45.0% | |
| ! | AAGATCTTAGCCGTTGATGG+AGG | + | Chr2:18914779-18914798 | MsG0280007667.01.T01:CDS | 45.0% |
| ! | ATCAAATGGGGTGATGGCTA+AGG | + | Chr2:18915384-18915403 | MsG0280007667.01.T01:CDS | 45.0% |
| ! | CCTAGGAGATGAAGTTCTAG+GGG | - | Chr2:18915632-18915651 | None:intergenic | 45.0% |
| ! | CTTTTCACCCGTGGTAAAGA+CGG | + | Chr2:18914422-18914441 | MsG0280007667.01.T01:CDS | 45.0% |
| !! | TCTTTCTGAGGCAGGATTCA+AGG | - | Chr2:18914319-18914338 | None:intergenic | 45.0% |
| !! | TTCTCTTGGTAACGGAGAGT+TGG | + | Chr2:18914901-18914920 | MsG0280007667.01.T01:CDS | 45.0% |
| AAACAAGCCAAAAACGCCGC+CGG | + | Chr2:18914221-18914240 | MsG0280007667.01.T01:CDS | 50.0% | |
| ACAGAATTTCCCGACGATCG+GGG | + | Chr2:18914498-18914517 | MsG0280007667.01.T01:CDS | 50.0% | |
| ACCACGGGTGAAAAGTAAGG+CGG | - | Chr2:18914417-18914436 | None:intergenic | 50.0% | |
| CATATCGGAAGCTCCTTCAC+CGG | - | Chr2:18914969-18914988 | None:intergenic | 50.0% | |
| CATCGCAACACCTCCATCAA+CGG | - | Chr2:18914792-18914811 | None:intergenic | 50.0% | |
| CCCCTAGAACTTCATCTCCT+AGG | + | Chr2:18915629-18915648 | MsG0280007667.01.T01:CDS | 50.0% | |
| GAAGACGGGGAAAACCACAT+CGG | + | Chr2:18915417-18915436 | MsG0280007667.01.T01:CDS | 50.0% | |
| GAGAATTCTGACTTTCCCGG+CGG | - | Chr2:18914240-18914259 | None:intergenic | 50.0% | |
| GATCTTCGTCTTCCCATCGA+TGG | - | Chr2:18914765-18914784 | None:intergenic | 50.0% | |
| GGATTCAACACTGCACAGCT+CGG | - | Chr2:18915859-18915878 | None:intergenic | 50.0% | |
| GGCAATTCTCACGAAACCTG+AGG | - | Chr2:18914948-18914967 | None:intergenic | 50.0% | |
| GGGGAAAACCACATCGGATT+TGG | + | Chr2:18915423-18915442 | MsG0280007667.01.T01:CDS | 50.0% | |
| TGAGTAACAGCAGTAGCCGT+TGG | - | Chr2:18914821-18914840 | None:intergenic | 50.0% | |
| TTCGTGAGAATTGCCGGTGA+AGG | + | Chr2:18914953-18914972 | MsG0280007667.01.T01:CDS | 50.0% | |
| TTTCCGGTGAGAAAACTCGC+CGG | - | Chr2:18914529-18914548 | None:intergenic | 50.0% | |
| !! | AACCACATCGGATTTGGTGG+CGG | + | Chr2:18915429-18915448 | MsG0280007667.01.T01:CDS | 50.0% |
| !! | ACCGGATTTCTTTCTGAGGC+AGG | - | Chr2:18914327-18914346 | None:intergenic | 50.0% |
| !! | AGGAGATGAAGTTCTAGGGG+AGG | - | Chr2:18915629-18915648 | None:intergenic | 50.0% |
| !! | ATCGGATTTGGTGGCGGTTT+CGG | + | Chr2:18915435-18915454 | MsG0280007667.01.T01:CDS | 50.0% |
| !! | GGAGATGAAGTTCTAGGGGA+GGG | - | Chr2:18915628-18915647 | None:intergenic | 50.0% |
| AACAAGCCAAAAACGCCGCC+GGG | + | Chr2:18914222-18914241 | MsG0280007667.01.T01:CDS | 55.0% | |
| AACCGCCACCAAATCCGATG+TGG | - | Chr2:18915434-18915453 | None:intergenic | 55.0% | |
| AACGCCGTTAAGTCTCCCTC+AGG | + | Chr2:18914929-18914948 | MsG0280007667.01.T01:CDS | 55.0% | |
| CGGTGAAGGAGCTTCCGATA+TGG | + | Chr2:18914967-18914986 | MsG0280007667.01.T01:CDS | 55.0% | |
| GATTTCTTCGACGCCGTTGC+TGG | + | Chr2:18914368-18914387 | MsG0280007667.01.T01:CDS | 55.0% | |
| GCTTCATCGGCAGTGAACAG+AGG | - | Chr2:18914452-18914471 | None:intergenic | 55.0% | |
| ! | ATTCTCTGCATTGACGGCGC+CGG | + | Chr2:18914254-18914273 | MsG0280007667.01.T01:CDS | 55.0% |
| ! | TCTCCGGCGAGTTTTCTCAC+CGG | + | Chr2:18914523-18914542 | MsG0280007667.01.T01:CDS | 55.0% |
| !! | ACCGTCGATTTCGAGAGCGT+CGG | - | Chr2:18914672-18914691 | None:intergenic | 55.0% |
| CGCGTGACGAGATCGTAGCA+GGG | - | Chr2:18914626-18914645 | None:intergenic | 60.0% | |
| GAGAGAGTGATTTCGCGGCG+AGG | - | Chr2:18914295-18914314 | None:intergenic | 60.0% | |
| GAGGATGCCGTCGGTGTAAC+CGG | - | Chr2:18914276-18914295 | None:intergenic | 60.0% | |
| GCCGACGCTCTCGAAATCGA+CGG | + | Chr2:18914668-18914687 | MsG0280007667.01.T01:CDS | 60.0% | |
| GGCGGTTTCGGAGGAGATGT+TGG | + | Chr2:18915447-18915466 | MsG0280007667.01.T01:CDS | 60.0% | |
| GGGTGAAAAGTAAGGCGGCG+AGG | - | Chr2:18914412-18914431 | None:intergenic | 60.0% | |
| TCGGCGCGGGAGAAAACGAA+CGG | - | Chr2:18914653-18914672 | None:intergenic | 60.0% | |
| TGCCACGTCAGCTGATCCAG+CGG | + | Chr2:18914721-18914740 | MsG0280007667.01.T01:CDS | 60.0% | |
| ! | GACTTTCCCGGCGGCGTTTT+TGG | - | Chr2:18914231-18914250 | None:intergenic | 60.0% |
| !! | GCCGCCTTACTTTTCACCCG+TGG | + | Chr2:18914413-18914432 | MsG0280007667.01.T01:CDS | 60.0% |
| !! | GGATTTGGTGGCGGTTTCGG+AGG | + | Chr2:18915438-18915457 | MsG0280007667.01.T01:CDS | 60.0% |
| ACCGACACCGGAGCCAGCAA+CGG | - | Chr2:18914384-18914403 | None:intergenic | 65.0% | |
| AGCCGCTGGATCAGCTGACG+TGG | - | Chr2:18914726-18914745 | None:intergenic | 65.0% | |
| CCCGACGATCGGGGATTCTC+CGG | + | Chr2:18914507-18914526 | MsG0280007667.01.T01:CDS | 65.0% | |
| CCGGAGAATCCCCGATCGTC+GGG | - | Chr2:18914510-18914529 | None:intergenic | 65.0% | |
| GCCGGAGAATCCCCGATCGT+CGG | - | Chr2:18914511-18914530 | None:intergenic | 65.0% | |
| GCGCGTGACGAGATCGTAGC+AGG | - | Chr2:18914627-18914646 | None:intergenic | 65.0% | |
| TTTCGCGGCGAGGATGCCGT+CGG | - | Chr2:18914285-18914304 | None:intergenic | 65.0% | |
| !! | CGATTTCGAGAGCGTCGGCG+CGG | - | Chr2:18914667-18914686 | None:intergenic | 65.0% |
| !! | GATTTCGAGAGCGTCGGCGC+GGG | - | Chr2:18914666-18914685 | None:intergenic | 65.0% |
| !! | TTCGACGCCGTTGCTGGCTC+CGG | + | Chr2:18914374-18914393 | MsG0280007667.01.T01:CDS | 65.0% |
| GGCGAGGACTCCACCGACAC+CGG | - | Chr2:18914396-18914415 | None:intergenic | 70.0% | |
| !! | GACGGCGCCGGTTACACCGA+CGG | + | Chr2:18914266-18914285 | MsG0280007667.01.T01:CDS | 70.0% |
| !! | GCCGTTGCTGGCTCCGGTGT+CGG | + | Chr2:18914380-18914399 | MsG0280007667.01.T01:CDS | 70.0% |
| !! | GTTGCTGGCTCCGGTGTCGG+TGG | + | Chr2:18914383-18914402 | MsG0280007667.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 18913942 | 18916086 | 18913942 | ID=MsG0280007667.01;Name=MsG0280007667.01 |
| Chr2 | mRNA | 18913942 | 18916086 | 18913942 | ID=MsG0280007667.01.T01;Parent=MsG0280007667.01;Name=MsG0280007667.01.T01;_AED=0.46;_eAED=0.46;_QI=108|1|1|1|1|1|2|390|437 |
| Chr2 | exon | 18913942 | 18914988 | 18913942 | ID=MsG0280007667.01.T01:exon:10030;Parent=MsG0280007667.01.T01 |
| Chr2 | exon | 18915322 | 18916086 | 18915322 | ID=MsG0280007667.01.T01:exon:10031;Parent=MsG0280007667.01.T01 |
| Chr2 | five_prime_UTR | 18913942 | 18914049 | 18913942 | ID=MsG0280007667.01.T01:five_prime_utr;Parent=MsG0280007667.01.T01 |
| Chr2 | CDS | 18914050 | 18914988 | 18914050 | ID=MsG0280007667.01.T01:cds;Parent=MsG0280007667.01.T01 |
| Chr2 | CDS | 18915322 | 18915696 | 18915322 | ID=MsG0280007667.01.T01:cds;Parent=MsG0280007667.01.T01 |
| Chr2 | three_prime_UTR | 18915697 | 18916086 | 18915697 | ID=MsG0280007667.01.T01:three_prime_utr;Parent=MsG0280007667.01.T01 |
| Gene Sequence |
| Protein sequence |
