AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017614.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017614.01.T01 MTR_3g110132 76.695 708 32 6 162 736 431 1138 0.0 1039
MsG0380017614.01.T01 MTR_3g110132 73.418 158 19 2 11 151 86 237 3.39e-61 223
MsG0380017614.01.T01 MTR_3g110132 93.939 33 2 0 1 33 1 33 1.68e-11 68.6
MsG0380017614.01.T01 MTR_3g110082 74.294 708 33 7 162 736 431 1122 0.0 992
MsG0380017614.01.T01 MTR_3g110082 73.418 158 19 2 11 151 86 237 2.97e-61 224
MsG0380017614.01.T01 MTR_3g110082 93.939 33 2 0 1 33 1 33 1.68e-11 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017614.01.T01 AT5G11530 26.990 515 245 20 322 736 569 1052 1.44e-20 97.8
MsG0380017614.01.T01 AT5G11530 26.990 515 245 20 322 736 569 1052 1.44e-20 97.8
MsG0380017614.01.T01 AT5G11530 26.990 515 245 20 322 736 569 1052 1.44e-20 97.8

Find 195 sgRNAs with CRISPR-Local

Find 429 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTCTTCTTACCCATTT+TGG 0.096254 3:-98546112 None:intergenic
TCCATTCAATGGAAGTAATT+TGG 0.098947 3:+98547380 MsG0380017614.01.T01:CDS
TGAATAGGAGATATTATTTA+TGG 0.166536 3:+98543734 MsG0380017614.01.T01:intron
CAGATGACAACTGCTGTTTA+TGG 0.226416 3:+98547228 MsG0380017614.01.T01:CDS
CACACGACAAATAATATTTA+TGG 0.233568 3:+98546711 MsG0380017614.01.T01:CDS
GCAAGGTGATTCTAATATAT+TGG 0.235030 3:+98543816 MsG0380017614.01.T01:five_prime_UTR
CTGTTGTTACTAAATCTTTC+CGG 0.238828 3:-98545542 None:intergenic
TTGAGAATCGGTTAAGCTTC+TGG 0.246175 3:+98542720 MsG0380017614.01.T01:five_prime_UTR
GCTCAAAATTCAACTAAGTT+TGG 0.276432 3:+98548247 MsG0380017614.01.T01:CDS
TACCCTATGGAAGCGTGATT+TGG 0.280229 3:-98547654 None:intergenic
CATGCATTTACTTAGCCTTA+TGG 0.281398 3:+98547959 MsG0380017614.01.T01:CDS
GGAATCCATTTGACAACTTT+GGG 0.284852 3:-98547456 None:intergenic
CATATAGACATTCCTGTTTC+CGG 0.288154 3:-98548463 None:intergenic
TCAAAATGTGAGGGGCTCTT+TGG 0.300346 3:+98547908 MsG0380017614.01.T01:CDS
TGGAATCCATTTGACAACTT+TGG 0.302661 3:-98547457 None:intergenic
CCATTCAATGGAAGTAATTT+GGG 0.305561 3:+98547381 MsG0380017614.01.T01:CDS
ATGATGAAGCTTCTCACATT+TGG 0.306024 3:+98547619 MsG0380017614.01.T01:CDS
AATGGAGAAAAGTAATGATT+TGG 0.310769 3:-98547363 None:intergenic
CTCTGTCCTTGTTGTGGCTC+AGG 0.317085 3:-98546174 None:intergenic
GGACCTGAAAGAAGCCAAAA+TGG 0.317688 3:+98546098 MsG0380017614.01.T01:CDS
TAATATATTGGCTGAGTTCA+TGG 0.324898 3:+98543828 MsG0380017614.01.T01:exon
TTCTCACATTTGGGCATCCT+TGG 0.327561 3:+98547629 MsG0380017614.01.T01:CDS
ACCCTATGGAAGCGTGATTT+GGG 0.328622 3:-98547653 None:intergenic
CACGCTTCCATAGGGTATAA+TGG 0.329318 3:+98547660 MsG0380017614.01.T01:CDS
CTCACAATAATGTCAGATAT+TGG 0.341851 3:-98544962 None:intergenic
TCCGGAACGGTGAATTCAGC+TGG 0.348631 3:-98548445 None:intergenic
AAACCACATGGCTGTTTCAT+TGG 0.351257 3:+98548154 MsG0380017614.01.T01:CDS
AGAAACAATCGACACTATTC+AGG 0.358145 3:-98545009 None:intergenic
AGAGAGGGGTTCGATTGTTT+CGG 0.364824 3:-98542562 None:intergenic
TAACCGATTCTCAACGGCTT+TGG 0.365904 3:-98542711 None:intergenic
GAGCACCTAGCATTCCTTGC+AGG 0.368798 3:+98546688 MsG0380017614.01.T01:CDS
CTCACTTCTTGTGGAAAGTC+TGG 0.377201 3:-98545243 None:intergenic
GTTGGACTCGGCAGCGGAAT+TGG 0.377263 3:+98545067 MsG0380017614.01.T01:CDS
TTCATTGGCTCTCCAACCTT+CGG 0.377757 3:+98548169 MsG0380017614.01.T01:CDS
CCCTCTCTCTTTCTCTCTCT+AGG 0.383951 3:+98542577 MsG0380017614.01.T01:five_prime_UTR
GAAAGGCAACTGCAGTAAAC+TGG 0.385523 3:+98546077 MsG0380017614.01.T01:intron
CCATTTGACAACTTTGGGAC+TGG 0.394511 3:-98547451 None:intergenic
TGCATATTCAGGGTAAAATC+AGG 0.399503 3:+98546436 MsG0380017614.01.T01:intron
TGAGAATCGGTTAAGCTTCT+GGG 0.399745 3:+98542721 MsG0380017614.01.T01:five_prime_UTR
CCCAAATTACTTCCATTGAA+TGG 0.402165 3:-98547381 None:intergenic
TGATGAAGCTTCTCACATTT+GGG 0.403735 3:+98547620 MsG0380017614.01.T01:CDS
CTTCTGTGTTCACAGGGAAA+GGG 0.403840 3:+98546271 MsG0380017614.01.T01:CDS
GAATTCACCGTTCCGGAAAC+AGG 0.411903 3:+98548451 MsG0380017614.01.T01:CDS
CCTCTCTCTTTCTCTCTCTA+GGG 0.420234 3:+98542578 MsG0380017614.01.T01:five_prime_UTR
CCTTCTGTGTTCACAGGGAA+AGG 0.420378 3:+98546270 MsG0380017614.01.T01:CDS
TCAGTTCCATGCAAACATAA+TGG 0.421717 3:+98547873 MsG0380017614.01.T01:CDS
TTGTAAACTTATTACCATGC+TGG 0.428145 3:-98548207 None:intergenic
ACAAATAATATTTATGGAAA+AGG 0.428380 3:+98546717 MsG0380017614.01.T01:CDS
TCTGAGCAGGGAACATTAGA+TGG 0.431462 3:+98547093 MsG0380017614.01.T01:CDS
CATTTGACAACTTTGGGACT+GGG 0.434457 3:-98547450 None:intergenic
AGCAGCTGAGGTGTCTGAGC+AGG 0.436972 3:+98547080 MsG0380017614.01.T01:CDS
GAAAAGCATAGTAGAAATAC+AGG 0.442449 3:+98547816 MsG0380017614.01.T01:CDS
GCGATGGAGCACTTGTTACT+TGG 0.443267 3:-98545209 None:intergenic
CATGAGTTCCACAATTTCCA+TGG 0.444920 3:-98547121 None:intergenic
ATGCCAGATGTGGTCTTTAA+CGG 0.447239 3:-98548400 None:intergenic
ACCCCTTGGTCTGAAGGAAC+TGG 0.447588 3:-98546480 None:intergenic
GCTTAACAAATCTATTCTGC+AGG 0.450052 3:-98548300 None:intergenic
CCAGTCCCAAAGTTGTCAAA+TGG 0.450921 3:+98547451 MsG0380017614.01.T01:CDS
AAGGGCAGAAGGAGAAATCA+AGG 0.453276 3:+98547277 MsG0380017614.01.T01:CDS
AACTTCACTGCAACGCAGAT+TGG 0.453708 3:+98548351 MsG0380017614.01.T01:CDS
GCTTATGTAATGCACCAGAT+TGG 0.455436 3:-98547737 None:intergenic
CATAGTAGAAATACAGGTCC+TGG 0.460419 3:+98547822 MsG0380017614.01.T01:CDS
CAACGCAGATTGGAAGTTCA+TGG 0.461524 3:+98548361 MsG0380017614.01.T01:CDS
CCCAGCTGAATTCACCGTTC+CGG 0.461612 3:+98548444 MsG0380017614.01.T01:CDS
TTGCAATCCATTATACCCTA+TGG 0.462283 3:-98547667 None:intergenic
CTCAAAAGACCCTCCTATCC+TGG 0.463652 3:+98548035 MsG0380017614.01.T01:CDS
GGAGTCTTCAGCAGGGTGAA+TGG 0.466614 3:+98547843 MsG0380017614.01.T01:CDS
CTTGAGGTGCTCTCTTGAAA+AGG 0.467761 3:-98546621 None:intergenic
CTGTCTATGTTGCTACTACT+AGG 0.470575 3:-98547705 None:intergenic
TTATCTCCTTCTGTGTTCAC+AGG 0.471846 3:+98546264 MsG0380017614.01.T01:CDS
AATAAGTTTACAAAAGATGA+TGG 0.472799 3:+98548217 MsG0380017614.01.T01:CDS
TGTCATCTGTGTGTTCCTAC+TGG 0.473813 3:-98547214 None:intergenic
TCTCTTCTCTGTCCTTGTTG+TGG 0.476877 3:-98546180 None:intergenic
AGCATTAACACCAACATTGA+AGG 0.477849 3:-98548006 None:intergenic
TGTCCAAAGCCGTTGAGAAT+CGG 0.478438 3:+98542708 MsG0380017614.01.T01:five_prime_UTR
TTACTTAGCCTTATGGATGC+AGG 0.478727 3:+98547966 MsG0380017614.01.T01:CDS
CAGGTCCTGGAGTCTTCAGC+AGG 0.489345 3:+98547835 MsG0380017614.01.T01:CDS
GACAGAACTTCACTCCAATC+TGG 0.489675 3:+98547723 MsG0380017614.01.T01:CDS
CTTCCTCCAGACCTTGAGAT+CGG 0.489892 3:+98545165 MsG0380017614.01.T01:intron
TGTAAACTTATTACCATGCT+GGG 0.490454 3:-98548206 None:intergenic
GTGCCGTTAAAGACCACATC+TGG 0.494418 3:+98548397 MsG0380017614.01.T01:CDS
TTCTGTGTTCACAGGGAAAG+GGG 0.498292 3:+98546272 MsG0380017614.01.T01:CDS
TCTATTCTGCAGGGATGAGT+TGG 0.499228 3:-98548290 None:intergenic
AATATATTGGCTGAGTTCAT+GGG 0.499497 3:+98543829 MsG0380017614.01.T01:exon
TTAGTTGTGCTCACTTCTTG+TGG 0.503990 3:-98545252 None:intergenic
TCAGACCAAGGGGTGATGAA+TGG 0.504143 3:+98546489 MsG0380017614.01.T01:CDS
AGGGTATAATGGATTGCAAA+AGG 0.504161 3:+98547671 MsG0380017614.01.T01:CDS
TGCATCGCTCTTGTCAATAG+TGG 0.504480 3:-98543896 None:intergenic
AAGATGAGCTTGTTAAAAGA+AGG 0.504615 3:+98547258 MsG0380017614.01.T01:CDS
GATGAAGATGCACCGAAGGT+TGG 0.506587 3:-98548181 None:intergenic
ACTATTGACAAGAGCGATGC+AGG 0.506752 3:+98543898 MsG0380017614.01.T01:CDS
ATTGGATCTTTCTGAATACA+AGG 0.508279 3:-98544944 None:intergenic
AAGGAGGGTTGAGGTGGATA+CGG 0.509001 3:-98547414 None:intergenic
TTCATCACCCCTTGGTCTGA+AGG 0.511914 3:-98546486 None:intergenic
GATCGTGTGCGGTGATCCAC+AGG 0.512009 3:+98542747 MsG0380017614.01.T01:five_prime_UTR
TATACAAATATCAATGCTAC+AGG 0.512498 3:+98547789 MsG0380017614.01.T01:CDS
GCCGGAGTTGGACTCGGCAG+CGG 0.515885 3:+98545061 MsG0380017614.01.T01:CDS
TTTCCGGCATGGTTATCTGC+AGG 0.517605 3:-98545526 None:intergenic
ACTGCATGCCTGCATCCATA+AGG 0.518402 3:-98547974 None:intergenic
TTCACCCTGCTGAAGACTCC+AGG 0.518829 3:-98547840 None:intergenic
GAGAGCTGCATTAGTGCAGT+TGG 0.519576 3:-98544918 None:intergenic
CAACTGCTGTTTATGGCAAA+GGG 0.524108 3:+98547235 MsG0380017614.01.T01:CDS
AGGCTAAGTAAATGCATGGC+AGG 0.525368 3:-98547954 None:intergenic
TTCAAATCGAAGGAGGGTTG+AGG 0.525802 3:-98547423 None:intergenic
CACCGTGTATACTACAGATA+AGG 0.526100 3:+98546212 MsG0380017614.01.T01:CDS
AGACCTTGAGATCGGATTGG+AGG 0.526788 3:+98545173 MsG0380017614.01.T01:intron
ACAACTGCTGTTTATGGCAA+AGG 0.527206 3:+98547234 MsG0380017614.01.T01:CDS
GACCTGAAAGAAGCCAAAAT+GGG 0.530359 3:+98546099 MsG0380017614.01.T01:CDS
CAAGGGGTGATGAATGGAAA+AGG 0.531742 3:+98546495 MsG0380017614.01.T01:CDS
AAAGAAAAGAAAGCCGGAGT+TGG 0.537516 3:+98545049 MsG0380017614.01.T01:CDS
TTCCAGTTCCTTCAGACCAA+GGG 0.538132 3:+98546478 MsG0380017614.01.T01:CDS
CCGGAACGGTGAATTCAGCT+GGG 0.538432 3:-98548444 None:intergenic
GCCCCAAATCACGCTTCCAT+AGG 0.538700 3:+98547651 MsG0380017614.01.T01:CDS
CCCCAAATCACGCTTCCATA+GGG 0.538718 3:+98547652 MsG0380017614.01.T01:CDS
AGGACAGAGAAGAGAAAATG+AGG 0.539206 3:+98546188 MsG0380017614.01.T01:CDS
TGGTATACCCATGGAAATTG+TGG 0.539386 3:+98547113 MsG0380017614.01.T01:CDS
GTTACTAAATCTTTCCGGCA+TGG 0.542908 3:-98545537 None:intergenic
CATGGAAATTGTGGAACTCA+TGG 0.545533 3:+98547122 MsG0380017614.01.T01:CDS
AAGAAAGCCGGAGTTGGACT+CGG 0.545631 3:+98545055 MsG0380017614.01.T01:CDS
ATTTGACAACTTTGGGACTG+GGG 0.546887 3:-98547449 None:intergenic
GAATGGAAAAGGAAAGGAGG+AGG 0.548371 3:+98546506 MsG0380017614.01.T01:CDS
TCTATTCCATTATGTTTGCA+TGG 0.549232 3:-98547879 None:intergenic
TCCAGACCTTGAGATCGGAT+TGG 0.550540 3:+98545170 MsG0380017614.01.T01:intron
GGTATTGCAATCACCAGGAT+AGG 0.558632 3:-98548048 None:intergenic
TTATTTGTCGTGTGCCTGCA+AGG 0.558745 3:-98546702 None:intergenic
CACATCTGGCATCTCATGTA+CGG 0.558988 3:+98548411 MsG0380017614.01.T01:CDS
GGAAGCGTGATTTGGGGCCA+AGG 0.561481 3:-98547646 None:intergenic
CCGTCGAAAGCTCTGTCAAA+CGG 0.562186 3:+98542676 MsG0380017614.01.T01:five_prime_UTR
CTCTTGAAAAGGCAATGTGA+AGG 0.562338 3:-98546610 None:intergenic
ACAGTGGATAATTATTTGCA+AGG 0.572974 3:+98543799 MsG0380017614.01.T01:five_prime_UTR
GCATTAACACCAACATTGAA+GGG 0.573669 3:-98548005 None:intergenic
AATCTTAGACTTAAATGCAC+GGG 0.575657 3:+98545469 MsG0380017614.01.T01:CDS
CTTGTTAAAAGAAGGGCAGA+AGG 0.578119 3:+98547266 MsG0380017614.01.T01:CDS
AACATTAGATGGTATACCCA+TGG 0.580380 3:+98547104 MsG0380017614.01.T01:CDS
TCCGCTGCCGAGTCCAACTC+CGG 0.580795 3:-98545062 None:intergenic
ATTGCAATCACCAGGATAGG+AGG 0.581860 3:-98548045 None:intergenic
GTTGAAGATGTGGAACAACT+AGG 0.581926 3:+98547033 MsG0380017614.01.T01:CDS
GTGTGCCTGCAAGGAATGCT+AGG 0.582009 3:-98546693 None:intergenic
ATTGAGAAAGAAAAGAAAGC+CGG 0.582253 3:+98545043 MsG0380017614.01.T01:CDS
TCTTGAAAAGGCAATGTGAA+GGG 0.583958 3:-98546609 None:intergenic
TATCCTCCAATCCGATCTCA+AGG 0.584459 3:-98545176 None:intergenic
ATGAGTTCCACAATTTCCAT+GGG 0.585494 3:-98547120 None:intergenic
AAATCGAAGGAGGGTTGAGG+TGG 0.589601 3:-98547420 None:intergenic
CATAAGGCTAAGTAAATGCA+TGG 0.590115 3:-98547958 None:intergenic
AAATCTTAGACTTAAATGCA+CGG 0.590524 3:+98545468 MsG0380017614.01.T01:CDS
CCTAGAGAGAGAAAGAGAGA+GGG 0.591318 3:-98542577 None:intergenic
GGGAATTTCAAATCGAAGGA+GGG 0.593553 3:-98547429 None:intergenic
GATTTGATTCGCTACTGCGT+CGG 0.595118 3:-98542629 None:intergenic
AGACATTCCTGTTTCCGGAA+CGG 0.596110 3:-98548458 None:intergenic
GGGGAATTTCAAATCGAAGG+AGG 0.597215 3:-98547430 None:intergenic
AACAGTTATATGTCAGAACA+TGG 0.598508 3:+98546546 MsG0380017614.01.T01:CDS
CCTTTCCCTGTGAACACAGA+AGG 0.601056 3:-98546270 None:intergenic
CCCTAGAGAGAGAAAGAGAG+AGG 0.603007 3:-98542578 None:intergenic
GAAGCTTAACCGATTCTCAA+CGG 0.603400 3:-98542717 None:intergenic
TACATAAGCAGAACATGAGG+AGG 0.604333 3:+98547751 MsG0380017614.01.T01:CDS
CCGTTTGACAGAGCTTTCGA+CGG 0.606842 3:-98542676 None:intergenic
TATCTCCTTCTGTGTTCACA+GGG 0.608986 3:+98546265 MsG0380017614.01.T01:CDS
AGGGCAGAAGGAGAAATCAA+GGG 0.608997 3:+98547278 MsG0380017614.01.T01:CDS
GCAGCTGAGGTGTCTGAGCA+GGG 0.609587 3:+98547081 MsG0380017614.01.T01:CDS
AATGGAAAAGGAAAGGAGGA+GGG 0.612679 3:+98546507 MsG0380017614.01.T01:CDS
CTATCGTTTCTATTAAACTG+AGG 0.616191 3:-98546648 None:intergenic
AAGGCAATGTGAAGGGAAGA+CGG 0.617798 3:-98546602 None:intergenic
ACTGGGGAATTTCAAATCGA+AGG 0.618785 3:-98547433 None:intergenic
TCACGTACACCCTTCAATGT+TGG 0.619278 3:+98547996 MsG0380017614.01.T01:CDS
GTTCCAGTTCCTTCAGACCA+AGG 0.621382 3:+98546477 MsG0380017614.01.T01:CDS
TTGATTCCTGAGCCACAACA+AGG 0.621832 3:+98546168 MsG0380017614.01.T01:CDS
GGCTGATGAAGATGCACCGA+AGG 0.623150 3:-98548185 None:intergenic
AGAGCCTCATCAAAATGTGA+GGG 0.625881 3:+98547899 MsG0380017614.01.T01:CDS
AGATGAGCTTGTTAAAAGAA+GGG 0.626077 3:+98547259 MsG0380017614.01.T01:CDS
CTTAACAAATCTATTCTGCA+GGG 0.627347 3:-98548299 None:intergenic
TGCCTTATCTGTAGTATACA+CGG 0.630280 3:-98546214 None:intergenic
TAGAGCCTCATCAAAATGTG+AGG 0.630851 3:+98547898 MsG0380017614.01.T01:CDS
TTGCAATCACCAGGATAGGA+GGG 0.633551 3:-98548044 None:intergenic
GGTGATGAATGGAAAAGGAA+AGG 0.635709 3:+98546500 MsG0380017614.01.T01:CDS
GATGAATGGAAAAGGAAAGG+AGG 0.637760 3:+98546503 MsG0380017614.01.T01:CDS
ATACAATGAACAAGCAGCTG+AGG 0.638367 3:+98547068 MsG0380017614.01.T01:CDS
AATACTGGTGCAAGAAACAC+AGG 0.639502 3:+98547003 MsG0380017614.01.T01:CDS
ACACCTGCAGATAACCATGC+CGG 0.645845 3:+98545523 MsG0380017614.01.T01:CDS
CCCTATGGAAGCGTGATTTG+GGG 0.652162 3:-98547652 None:intergenic
CTAGAGAGAGAAAGAGAGAG+GGG 0.655890 3:-98542576 None:intergenic
ATTAAACTGAGGAACTCTTG+AGG 0.656411 3:-98546637 None:intergenic
TCCAGTTCCTTCAGACCAAG+GGG 0.657782 3:+98546479 MsG0380017614.01.T01:CDS
GCATCTTCATCAGCCCAGCA+TGG 0.660855 3:+98548193 MsG0380017614.01.T01:CDS
GGGCAGAAGGAGAAATCAAG+GGG 0.661066 3:+98547279 MsG0380017614.01.T01:CDS
CGTACATGAGATGCCAGATG+TGG 0.661763 3:-98548410 None:intergenic
TGGCAAAGAATCAGTACGAG+AGG 0.662532 3:+98547142 MsG0380017614.01.T01:CDS
ACATAAGCAGAACATGAGGA+GGG 0.670532 3:+98547752 MsG0380017614.01.T01:CDS
GTGATGTGCTTGCACAACAG+TGG 0.683918 3:+98543783 MsG0380017614.01.T01:five_prime_UTR
AGGTCCTGGAGTCTTCAGCA+GGG 0.685773 3:+98547836 MsG0380017614.01.T01:CDS
CATTACATAAGCAGAACATG+AGG 0.689243 3:+98547748 MsG0380017614.01.T01:CDS
GAGCCTCATCAAAATGTGAG+GGG 0.694506 3:+98547900 MsG0380017614.01.T01:CDS
TACTTATCAGATAAACCACA+TGG 0.708040 3:+98548142 MsG0380017614.01.T01:intron
CTTCTGGGAGAGATCGTGTG+CGG 0.718082 3:+98542736 MsG0380017614.01.T01:five_prime_UTR
GAGCCAATGAAACAGCCATG+TGG 0.733703 3:-98548157 None:intergenic
TGTGGTCTTTAACGGCACAG+AGG 0.748510 3:-98548392 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGCAAAAAAAAAAAAAAA+AGG - Chr3:98542956-98542975 None:intergenic 10.0%
!!! AGAGATAAATTAATTTTAAA+CGG + Chr3:98543087-98543106 MsG0380017614.01.T01:intron 10.0%
!! AAATTTCAAATGGAAATAAT+GGG - Chr3:98543693-98543712 None:intergenic 15.0%
!! AATTACATAATACCATTAAT+TGG - Chr3:98546845-98546864 None:intergenic 15.0%
!! ACAAATAATATTTATGGAAA+AGG + Chr3:98546717-98546736 MsG0380017614.01.T01:CDS 15.0%
!! AGTTTAATATATTTGTGAAT+AGG + Chr3:98543719-98543738 MsG0380017614.01.T01:intron 15.0%
!! ATTCAAAACTTTCTATATTT+AGG - Chr3:98544505-98544524 None:intergenic 15.0%
!! ATTGAATTATATATAAGAAG+AGG - Chr3:98542813-98542832 None:intergenic 15.0%
!! TAAATTTCAAATGGAAATAA+TGG - Chr3:98543694-98543713 None:intergenic 15.0%
!! TATAACAAAAAAAAAAATGG+AGG - Chr3:98543240-98543259 None:intergenic 15.0%
!! TCTAAACTTTATTATACTTA+AGG - Chr3:98544087-98544106 None:intergenic 15.0%
!! TTATTCAATGAATCTAAAAA+AGG - Chr3:98544056-98544075 None:intergenic 15.0%
!!! ATCTTTTTGTTGTTTTAATT+GGG + Chr3:98545123-98545142 MsG0380017614.01.T01:intron 15.0%
!!! TATCTTTTTGTTGTTTTAAT+TGG + Chr3:98545122-98545141 MsG0380017614.01.T01:intron 15.0%
!!! TTTACAATAATATTTGAAGT+TGG + Chr3:98544415-98544434 MsG0380017614.01.T01:intron 15.0%
!! AAATGTACAATTCAAGTAAA+AGG + Chr3:98545387-98545406 MsG0380017614.01.T01:intron 20.0%
!! AACTCAGATTAAATTTCAAA+TGG - Chr3:98543703-98543722 None:intergenic 20.0%
!! AATAAGTTTACAAAAGATGA+TGG + Chr3:98548217-98548236 MsG0380017614.01.T01:CDS 20.0%
!! ACTAACAATAATTAAGATAG+TGG - Chr3:98544682-98544701 None:intergenic 20.0%
!! ATATTACAAGATAGTAGTTT+AGG - Chr3:98544310-98544329 None:intergenic 20.0%
!! CAAATCTAGTAACAAATAAA+AGG - Chr3:98543537-98543556 None:intergenic 20.0%
!! CACACAATTAAATTATCTTA+GGG - Chr3:98543117-98543136 None:intergenic 20.0%
!! TAGATAAACATGAATTAACT+CGG - Chr3:98543059-98543078 None:intergenic 20.0%
!! TCACACAATTAAATTATCTT+AGG - Chr3:98543118-98543137 None:intergenic 20.0%
!! TGAATAGGAGATATTATTTA+TGG + Chr3:98543734-98543753 MsG0380017614.01.T01:intron 20.0%
!! TTAATTCATCTTTATCTGAT+AGG - Chr3:98546813-98546832 None:intergenic 20.0%
!!! AAGCTTTAAGAAAACAATTA+GGG - Chr3:98543566-98543585 None:intergenic 20.0%
!!! AATGTGAACATTTTTCAATA+CGG + Chr3:98543923-98543942 MsG0380017614.01.T01:CDS 20.0%
!!! AATTAATTTGACTTAAGTGT+TGG + Chr3:98543659-98543678 MsG0380017614.01.T01:intron 20.0%
!!! AGTAAAAGGTTCTTTTTTAT+TGG + Chr3:98545401-98545420 MsG0380017614.01.T01:intron 20.0%
!!! CTGTTATTTTTATTGACTAT+AGG + Chr3:98544368-98544387 MsG0380017614.01.T01:intron 20.0%
!!! GTAAAAGGTTCTTTTTTATT+GGG + Chr3:98545402-98545421 MsG0380017614.01.T01:intron 20.0%
!!! GTTTTGTAATTAATTTGAGA+GGG + Chr3:98544552-98544571 MsG0380017614.01.T01:intron 20.0%
!!! TTTAGCATCTTTCATAATTT+TGG + Chr3:98543416-98543435 MsG0380017614.01.T01:intron 20.0%
!!! TTTTCTTTCTCAATAGTAAT+TGG - Chr3:98545037-98545056 None:intergenic 20.0%
!!! TTTTGTAATTAATTTGAGAG+GGG + Chr3:98544553-98544572 MsG0380017614.01.T01:intron 20.0%
! AAAAAGATTGGAAACTTTGT+TGG + Chr3:98544729-98544748 MsG0380017614.01.T01:intron 25.0%
! AAACTATGAACAAGAAAATG+CGG + Chr3:98544830-98544849 MsG0380017614.01.T01:intron 25.0%
! AAATCTTAGACTTAAATGCA+CGG + Chr3:98545468-98545487 MsG0380017614.01.T01:CDS 25.0%
! AACAAATAAAAGGAAAGACA+AGG - Chr3:98543527-98543546 None:intergenic 25.0%
! AAGAACAAAAAGAATCAAGT+TGG + Chr3:98546132-98546151 MsG0380017614.01.T01:CDS 25.0%
! AATGGAGAAAAGTAATGATT+TGG - Chr3:98547366-98547385 None:intergenic 25.0%
! CACACGACAAATAATATTTA+TGG + Chr3:98546711-98546730 MsG0380017614.01.T01:CDS 25.0%
! CATATTATTATCTGATTCCA+TGG - Chr3:98545568-98545587 None:intergenic 25.0%
! CATGCATTTAAAAATCGAAA+GGG - Chr3:98544443-98544462 None:intergenic 25.0%
! CTATCATTGAACTAATTGTA+TGG + Chr3:98543298-98543317 MsG0380017614.01.T01:intron 25.0%
! GAATTATATGATTTAATGCG+TGG - Chr3:98543184-98543203 None:intergenic 25.0%
! TAAAGAATTAAGTTCTCCAT+CGG - Chr3:98546378-98546397 None:intergenic 25.0%
! TAATAATATGATCACACAAC+TGG + Chr3:98545578-98545597 MsG0380017614.01.T01:intron 25.0%
! TACACAAGAATATTTACAAC+AGG + Chr3:98547596-98547615 MsG0380017614.01.T01:intron 25.0%
! TAGACCTAAGAAAAATAACA+TGG + Chr3:98547302-98547321 MsG0380017614.01.T01:CDS 25.0%
! TAGTGGTTAATTTATTCAGT+GGG + Chr3:98544187-98544206 MsG0380017614.01.T01:intron 25.0%
! TATACAAATATCAATGCTAC+AGG + Chr3:98547789-98547808 MsG0380017614.01.T01:CDS 25.0%
! TTAGTGGTTAATTTATTCAG+TGG + Chr3:98544186-98544205 MsG0380017614.01.T01:intron 25.0%
!! AATTCTGCTGAGATTTTTAA+TGG + Chr3:98545496-98545515 MsG0380017614.01.T01:CDS 25.0%
!! ATTCTGCTGAGATTTTTAAT+GGG + Chr3:98545497-98545516 MsG0380017614.01.T01:CDS 25.0%
!! CTTTCGATTTTTAAATGCAT+GGG + Chr3:98544442-98544461 MsG0380017614.01.T01:intron 25.0%
!! TTTTTAAATGCATGGGAATA+AGG + Chr3:98544449-98544468 MsG0380017614.01.T01:intron 25.0%
!!! ACATATAACTGAAGTATTGT+AGG - Chr3:98543982-98544001 None:intergenic 25.0%
!!! AGTATGAGAGTATTTTTAGT+TGG + Chr3:98543371-98543390 MsG0380017614.01.T01:intron 25.0%
!!! CAAGCTTTAAGAAAACAATT+AGG - Chr3:98543567-98543586 None:intergenic 25.0%
!!! CGTTTTGTAATTAATTTGAG+AGG + Chr3:98544551-98544570 MsG0380017614.01.T01:intron 25.0%
!!! GTTTTATTGAATTAGACCTA+GGG + Chr3:98543393-98543412 MsG0380017614.01.T01:intron 25.0%
!!! TATTTCTACTATGCTTTTCT+TGG - Chr3:98547815-98547834 None:intergenic 25.0%
AAAAATAACATGGTCACAAG+AGG + Chr3:98547312-98547331 MsG0380017614.01.T01:CDS 30.0%
AACAAAACCAGCAAAACATT+AGG - Chr3:98543270-98543289 None:intergenic 30.0%
AACAGTTATATGTCAGAACA+TGG + Chr3:98546546-98546565 MsG0380017614.01.T01:CDS 30.0%
AACTAATTGTATGGATGACA+TGG + Chr3:98543307-98543326 MsG0380017614.01.T01:intron 30.0%
AATCTTAGACTTAAATGCAC+GGG + Chr3:98545469-98545488 MsG0380017614.01.T01:CDS 30.0%
ACAAAACCAGCAAAACATTA+GGG - Chr3:98543269-98543288 None:intergenic 30.0%
ACAGTGGATAATTATTTGCA+AGG + Chr3:98543799-98543818 MsG0380017614.01.T01:five_prime_UTR 30.0%
AGATCTGACTTTAACAAACA+GGG + Chr3:98545875-98545894 MsG0380017614.01.T01:intron 30.0%
AGTTTAGGAATAGTCTCTAA+AGG - Chr3:98544295-98544314 None:intergenic 30.0%
ATAGTGGTAAAGAATCTGAA+AGG - Chr3:98544666-98544685 None:intergenic 30.0%
ATTGAGAAAGAAAAGAAAGC+CGG + Chr3:98545043-98545062 MsG0380017614.01.T01:CDS 30.0%
ATTGGATCTTTCTGAATACA+AGG - Chr3:98544947-98544966 None:intergenic 30.0%
CAGAAATTCGGAAAAAAGAT+TGG + Chr3:98544717-98544736 MsG0380017614.01.T01:intron 30.0%
CCATGCATTTAAAAATCGAA+AGG - Chr3:98544444-98544463 None:intergenic 30.0%
CCATTCAATGGAAGTAATTT+GGG + Chr3:98547381-98547400 MsG0380017614.01.T01:CDS 30.0%
CTATCGTTTCTATTAAACTG+AGG - Chr3:98546651-98546670 None:intergenic 30.0%
CTCACAATAATGTCAGATAT+TGG - Chr3:98544965-98544984 None:intergenic 30.0%
CTGTTGTTACTAAATCTTTC+CGG - Chr3:98545545-98545564 None:intergenic 30.0%
CTTAACAAATCTATTCTGCA+GGG - Chr3:98548302-98548321 None:intergenic 30.0%
CTTCTGTTGTAATAATCAGA+CGG - Chr3:98548121-98548140 None:intergenic 30.0%
GAATGCAAAAACAACTAGTA+CGG + Chr3:98545995-98546014 MsG0380017614.01.T01:intron 30.0%
GATTACACTGTCTTAATTAG+AGG + Chr3:98544340-98544359 MsG0380017614.01.T01:intron 30.0%
GCAAGGTGATTCTAATATAT+TGG + Chr3:98543816-98543835 MsG0380017614.01.T01:five_prime_UTR 30.0%
GCTCAAAATTCAACTAAGTT+TGG + Chr3:98548247-98548266 MsG0380017614.01.T01:CDS 30.0%
GGTTCTTAAGAATATGTATG+TGG - Chr3:98543961-98543980 None:intergenic 30.0%
GTATTCTCTGAACATTTATG+TGG - Chr3:98546764-98546783 None:intergenic 30.0%
GTGAATATGTCTCAGAAATT+CGG + Chr3:98544705-98544724 MsG0380017614.01.T01:intron 30.0%
TAACACGATTAAAGTCTGTT+TGG - Chr3:98544877-98544896 None:intergenic 30.0%
TAATACCATTAATTGGTCAG+AGG - Chr3:98546838-98546857 None:intergenic 30.0%
TAATTCCTCTGACCAATTAA+TGG + Chr3:98546830-98546849 MsG0380017614.01.T01:intron 30.0%
TACTTATCAGATAAACCACA+TGG + Chr3:98548142-98548161 MsG0380017614.01.T01:intron 30.0%
TAGAAATCATAGGTGAAAAC+TGG - Chr3:98547480-98547499 None:intergenic 30.0%
TAGTGGTAAAGAATCTGAAA+GGG - Chr3:98544665-98544684 None:intergenic 30.0%
TCCATTCAATGGAAGTAATT+TGG + Chr3:98547380-98547399 MsG0380017614.01.T01:CDS 30.0%
TCTATTCCATTATGTTTGCA+TGG - Chr3:98547882-98547901 None:intergenic 30.0%
TGTAAACTTATTACCATGCT+GGG - Chr3:98548209-98548228 None:intergenic 30.0%
TTCAATCCATCCAAAGAAAA+GGG + Chr3:98546338-98546357 MsG0380017614.01.T01:intron 30.0%
TTGAAAAATCTTCTACCAGT+AGG + Chr3:98547199-98547218 MsG0380017614.01.T01:CDS 30.0%
TTGTAAACTTATTACCATGC+TGG - Chr3:98548210-98548229 None:intergenic 30.0%
! AAAAAACCCTAATGTTTTGC+TGG + Chr3:98543260-98543279 MsG0380017614.01.T01:intron 30.0%
! AACTCATTTTCTAGGTTCTT+AGG - Chr3:98546320-98546339 None:intergenic 30.0%
! AATATATTGGCTGAGTTCAT+GGG + Chr3:98543829-98543848 MsG0380017614.01.T01:exon 30.0%
! AGAGATTCTTTTGCATATTC+AGG + Chr3:98546425-98546444 MsG0380017614.01.T01:intron 30.0%
! ATGTTCTTCTAGCACATTTT+TGG - Chr3:98546041-98546060 None:intergenic 30.0%
! CCTTTCGATTTTTAAATGCA+TGG + Chr3:98544441-98544460 MsG0380017614.01.T01:intron 30.0%
! CTTAGTTGAATTTTGAGCAT+TGG - Chr3:98548245-98548264 None:intergenic 30.0%
! GAAAAGCATAGTAGAAATAC+AGG + Chr3:98547816-98547835 MsG0380017614.01.T01:CDS 30.0%
! GAATTTTATCTTCTTGTCGT+TGG - Chr3:98542497-98542516 None:intergenic 30.0%
! GAGATTCTTTTGCATATTCA+GGG + Chr3:98546426-98546445 MsG0380017614.01.T01:intron 30.0%
! GATAGTGAAACCAATGTTTT+TGG + Chr3:98546666-98546685 MsG0380017614.01.T01:CDS 30.0%
! GCATTTTCTTGTTCATAGTT+TGG - Chr3:98544831-98544850 None:intergenic 30.0%
! GGAAAGTCTGGATAAATTTT+AGG - Chr3:98545234-98545253 None:intergenic 30.0%
! TAAAAAAAGAGAGCGTGAAA+CGG - Chr3:98542985-98543004 None:intergenic 30.0%
! TAATATATTGGCTGAGTTCA+TGG + Chr3:98543828-98543847 MsG0380017614.01.T01:exon 30.0%
! TTCTGCTGAGATTTTTAATG+GGG + Chr3:98545498-98545517 MsG0380017614.01.T01:CDS 30.0%
! TTTTCACAGCTAAATGTTAG+TGG + Chr3:98544170-98544189 MsG0380017614.01.T01:intron 30.0%
!! AAGATGAGCTTGTTAAAAGA+AGG + Chr3:98547258-98547277 MsG0380017614.01.T01:CDS 30.0%
!! AGATGAGCTTGTTAAAAGAA+GGG + Chr3:98547259-98547278 MsG0380017614.01.T01:CDS 30.0%
!! ATGGATTGAACTCATTTTCT+AGG - Chr3:98546328-98546347 None:intergenic 30.0%
!! CATTACTTTTCTCCATTCAA+TGG + Chr3:98547369-98547388 MsG0380017614.01.T01:CDS 30.0%
!! GGATATCTTTAGAATGTCTT+TGG - Chr3:98544856-98544875 None:intergenic 30.0%
!! TGTTTACAATTTGCTGAGAA+AGG + Chr3:98546060-98546079 MsG0380017614.01.T01:intron 30.0%
!!! GGTTTTATTGAATTAGACCT+AGG + Chr3:98543392-98543411 MsG0380017614.01.T01:intron 30.0%
!!! GTGACCATGTTATTTTTCTT+AGG - Chr3:98547309-98547328 None:intergenic 30.0%
!!! TGATTTGGCTTTCTTTTGTT+AGG - Chr3:98547351-98547370 None:intergenic 30.0%
!!! TTCTAGCACATTTTTGGAAT+TGG - Chr3:98546035-98546054 None:intergenic 30.0%
AACATTAGATGGTATACCCA+TGG + Chr3:98547104-98547123 MsG0380017614.01.T01:CDS 35.0%
AAGACAGTGTAATCAACTAC+AGG - Chr3:98544334-98544353 None:intergenic 35.0%
AAGTGAGCACAACTAAAAGA+GGG + Chr3:98545259-98545278 MsG0380017614.01.T01:intron 35.0%
ACGCTTGATCTAAAAAGAGA+AGG - Chr3:98542787-98542806 None:intergenic 35.0%
AGAAACAATCGACACTATTC+AGG - Chr3:98545012-98545031 None:intergenic 35.0%
AGATTTAGTAACAACAGCCA+TGG + Chr3:98545548-98545567 MsG0380017614.01.T01:intron 35.0%
AGCATTAACACCAACATTGA+AGG - Chr3:98548009-98548028 None:intergenic 35.0%
AGGAAAAACTGTTGAAGATG+TGG + Chr3:98547023-98547042 MsG0380017614.01.T01:CDS 35.0%
AGTTGAAGCTCAAAACTTAG+AGG + Chr3:98545971-98545990 MsG0380017614.01.T01:intron 35.0%
ATGAGTTCCACAATTTCCAT+GGG - Chr3:98547123-98547142 None:intergenic 35.0%
ATGATGAAGCTTCTCACATT+TGG + Chr3:98547619-98547638 MsG0380017614.01.T01:CDS 35.0%
ATGCAAAGTAAAAGCTGAAG+TGG - Chr3:98542930-98542949 None:intergenic 35.0%
ATTAAACTGAGGAACTCTTG+AGG - Chr3:98546640-98546659 None:intergenic 35.0%
ATTGCAAAGTAGCATTAGAG+GGG - Chr3:98547558-98547577 None:intergenic 35.0%
ATTTGCTCATAAATGTGACC+GGG - Chr3:98544030-98544049 None:intergenic 35.0%
CACAGTATGATTACAAGCAA+GGG - Chr3:98545618-98545637 None:intergenic 35.0%
CATAAGGCTAAGTAAATGCA+TGG - Chr3:98547961-98547980 None:intergenic 35.0%
CATATAGACATTCCTGTTTC+CGG - Chr3:98548466-98548485 None:intergenic 35.0%
CATTACATAAGCAGAACATG+AGG + Chr3:98547748-98547767 MsG0380017614.01.T01:CDS 35.0%
CATTTGCTCATAAATGTGAC+CGG - Chr3:98544031-98544050 None:intergenic 35.0%
CCCAAATTACTTCCATTGAA+TGG - Chr3:98547384-98547403 None:intergenic 35.0%
CGAAGATAAAAAGCTTAGCT+CGG - Chr3:98542656-98542675 None:intergenic 35.0%
CGCGGAATATCAAGTTTAAT+GGG + Chr3:98547515-98547534 MsG0380017614.01.T01:intron 35.0%
CTTGTTCATAGTTTGGAGAA+TGG - Chr3:98544824-98544843 None:intergenic 35.0%
GACTTTAATCGTGTTAGTAC+TGG + Chr3:98544881-98544900 MsG0380017614.01.T01:intron 35.0%
GAGATCTGACTTTAACAAAC+AGG + Chr3:98545874-98545893 MsG0380017614.01.T01:intron 35.0%
GATTGCAAAGTAGCATTAGA+GGG - Chr3:98547559-98547578 None:intergenic 35.0%
GCATTAACACCAACATTGAA+GGG - Chr3:98548008-98548027 None:intergenic 35.0%
GCTTAACAAATCTATTCTGC+AGG - Chr3:98548303-98548322 None:intergenic 35.0%
GGAATCCATTTGACAACTTT+GGG - Chr3:98547459-98547478 None:intergenic 35.0%
GGGAGGTAATATTAGTAGAA+GGG + Chr3:98544207-98544226 MsG0380017614.01.T01:intron 35.0%
GTCAGATCATCTATTGGAAA+TGG - Chr3:98544755-98544774 None:intergenic 35.0%
GTTCAATCCATCCAAAGAAA+AGG + Chr3:98546337-98546356 MsG0380017614.01.T01:intron 35.0%
GTTGAAGCTCAAAACTTAGA+GGG + Chr3:98545972-98545991 MsG0380017614.01.T01:intron 35.0%
TATGAAAGATGCTAAACCCT+AGG - Chr3:98543412-98543431 None:intergenic 35.0%
TCAATCCATCCAAAGAAAAG+GGG + Chr3:98546339-98546358 MsG0380017614.01.T01:intron 35.0%
TCAGTTCCATGCAAACATAA+TGG + Chr3:98547873-98547892 MsG0380017614.01.T01:CDS 35.0%
TCTTGAAAAGGCAATGTGAA+GGG - Chr3:98546612-98546631 None:intergenic 35.0%
TGATGAAGCTTCTCACATTT+GGG + Chr3:98547620-98547639 MsG0380017614.01.T01:CDS 35.0%
TGCAAACATGTACCAAAGTA+AGG - Chr3:98543621-98543640 None:intergenic 35.0%
TGCATATTCAGGGTAAAATC+AGG + Chr3:98546436-98546455 MsG0380017614.01.T01:intron 35.0%
TGCCTTATCTGTAGTATACA+CGG - Chr3:98546217-98546236 None:intergenic 35.0%
TGGAATCCATTTGACAACTT+TGG - Chr3:98547460-98547479 None:intergenic 35.0%
TGGGAGGTAATATTAGTAGA+AGG + Chr3:98544206-98544225 MsG0380017614.01.T01:intron 35.0%
TGGTTAATTTATTCAGTGGG+AGG + Chr3:98544190-98544209 MsG0380017614.01.T01:intron 35.0%
TTAACAAACAGGGTCATAGT+AGG + Chr3:98545885-98545904 MsG0380017614.01.T01:intron 35.0%
TTACAAGCAAGGGATTCAAT+AGG - Chr3:98545608-98545627 None:intergenic 35.0%
TTGAAGCTCAAAACTTAGAG+GGG + Chr3:98545973-98545992 MsG0380017614.01.T01:intron 35.0%
TTGCAATACCAGTTGGAAAT+TGG + Chr3:98548061-98548080 MsG0380017614.01.T01:intron 35.0%
TTGCAATCCATTATACCCTA+TGG - Chr3:98547670-98547689 None:intergenic 35.0%
! ACCAGTATTTTCCTGCAAAA+CGG - Chr3:98546992-98547011 None:intergenic 35.0%
! AGCATCTATTTTCTACGTCA+GGG - Chr3:98547173-98547192 None:intergenic 35.0%
! ATTTTCCCCTTTTCTTTGGA+TGG - Chr3:98546347-98546366 None:intergenic 35.0%
! CTTCTTCTTCTTACCCATTT+TGG - Chr3:98546115-98546134 None:intergenic 35.0%
! GAAGACGGTTTTCTATTTGA+TGG - Chr3:98546590-98546609 None:intergenic 35.0%
! TCTGCTGAGATTTTTAATGG+GGG + Chr3:98545499-98545518 MsG0380017614.01.T01:CDS 35.0%
! TCTGGATAAATTTTAGGCGA+TGG - Chr3:98545228-98545247 None:intergenic 35.0%
! TTTATCGAGAGGCATATGAT+TGG + Chr3:98544474-98544493 MsG0380017614.01.T01:intron 35.0%
!! ACTGACTTTTTGCGTGAAAA+TGG + Chr3:98545741-98545760 MsG0380017614.01.T01:intron 35.0%
!! AGGGTATAATGGATTGCAAA+AGG + Chr3:98547671-98547690 MsG0380017614.01.T01:CDS 35.0%
!! CATGCATTTACTTAGCCTTA+TGG + Chr3:98547959-98547978 MsG0380017614.01.T01:CDS 35.0%
!! TTTTCTAGGTTCTTAGGTTG+TGG - Chr3:98546314-98546333 None:intergenic 35.0%
!!! AGGTTCTTTTTTATTGGGAC+AGG + Chr3:98545407-98545426 MsG0380017614.01.T01:intron 35.0%
!!! TTCTTTTTTATTGGGACAGG+TGG + Chr3:98545410-98545429 MsG0380017614.01.T01:intron 35.0%
AAAGAAAAGAAAGCCGGAGT+TGG + Chr3:98545049-98545068 MsG0380017614.01.T01:CDS 40.0%
AACAGGGTCATAGTAGGAAA+AGG + Chr3:98545891-98545910 MsG0380017614.01.T01:intron 40.0%
AAGAGTTCATCTAGGAGGTT+CGG - Chr3:98544241-98544260 None:intergenic 40.0%
AATACTGGTGCAAGAAACAC+AGG + Chr3:98547003-98547022 MsG0380017614.01.T01:CDS 40.0%
AATGGAAAAGGAAAGGAGGA+GGG + Chr3:98546507-98546526 MsG0380017614.01.T01:CDS 40.0%
ACATAAGCAGAACATGAGGA+GGG + Chr3:98547752-98547771 MsG0380017614.01.T01:CDS 40.0%
ACCAAAAGAGTTCATCTAGG+AGG - Chr3:98544246-98544265 None:intergenic 40.0%
ACTGGGGAATTTCAAATCGA+AGG - Chr3:98547436-98547455 None:intergenic 40.0%
AGAGCCTCATCAAAATGTGA+GGG + Chr3:98547899-98547918 MsG0380017614.01.T01:CDS 40.0%
AGGAAAAGGAAAATTCTCCC+CGG + Chr3:98545905-98545924 MsG0380017614.01.T01:intron 40.0%
AGGACAGAGAAGAGAAAATG+AGG + Chr3:98546188-98546207 MsG0380017614.01.T01:CDS 40.0%
AGTACGGAGTATGGAAAGTA+TGG + Chr3:98545932-98545951 MsG0380017614.01.T01:intron 40.0%
ATACAATGAACAAGCAGCTG+AGG + Chr3:98547068-98547087 MsG0380017614.01.T01:CDS 40.0%
ATGCCAGATGTGGTCTTTAA+CGG - Chr3:98548403-98548422 None:intergenic 40.0%
ATGTTGTCTGTACTTACTGC+AGG - Chr3:98545641-98545660 None:intergenic 40.0%
CACCGTGTATACTACAGATA+AGG + Chr3:98546212-98546231 MsG0380017614.01.T01:CDS 40.0%
CAGTAAAAATCCCAATTCCG+TGG + Chr3:98545789-98545808 MsG0380017614.01.T01:intron 40.0%
CATAGTAGAAATACAGGTCC+TGG + Chr3:98547822-98547841 MsG0380017614.01.T01:CDS 40.0%
CATGAGTTCCACAATTTCCA+TGG - Chr3:98547124-98547143 None:intergenic 40.0%
CATGGAAATTGTGGAACTCA+TGG + Chr3:98547122-98547141 MsG0380017614.01.T01:CDS 40.0%
CCAAGCTGGTTAGAAATCAT+AGG - Chr3:98547490-98547509 None:intergenic 40.0%
CCTATGATTTCTAACCAGCT+TGG + Chr3:98547487-98547506 MsG0380017614.01.T01:intron 40.0%
CTCTTGAAAAGGCAATGTGA+AGG - Chr3:98546613-98546632 None:intergenic 40.0%
CTGTCTATGTTGCTACTACT+AGG - Chr3:98547708-98547727 None:intergenic 40.0%
CTTGTTAAAAGAAGGGCAGA+AGG + Chr3:98547266-98547285 MsG0380017614.01.T01:CDS 40.0%
GAACAAGATTCCGATCAACA+CGG - Chr3:98542844-98542863 None:intergenic 40.0%
GAAGTGAGCACAACTAAAAG+AGG + Chr3:98545258-98545277 MsG0380017614.01.T01:intron 40.0%
GACACCAAAAGAGTTCATCT+AGG - Chr3:98544249-98544268 None:intergenic 40.0%
GACCTGAAAGAAGCCAAAAT+GGG + Chr3:98546099-98546118 MsG0380017614.01.T01:CDS 40.0%
GATGAATGGAAAAGGAAAGG+AGG + Chr3:98546503-98546522 MsG0380017614.01.T01:CDS 40.0%
GCACAGTATGATTACAAGCA+AGG - Chr3:98545619-98545638 None:intergenic 40.0%
GCGCGGAATATCAAGTTTAA+TGG + Chr3:98547514-98547533 MsG0380017614.01.T01:intron 40.0%
GCTTATGTAATGCACCAGAT+TGG - Chr3:98547740-98547759 None:intergenic 40.0%
GGAATAAGGACTTTATCGAG+AGG + Chr3:98544463-98544482 MsG0380017614.01.T01:intron 40.0%
GGATTGCAAAGTAGCATTAG+AGG - Chr3:98547560-98547579 None:intergenic 40.0%
GGGAATTTCAAATCGAAGGA+GGG - Chr3:98547432-98547451 None:intergenic 40.0%
GGTGATGAATGGAAAAGGAA+AGG + Chr3:98546500-98546519 MsG0380017614.01.T01:CDS 40.0%
GTGCTTGTCAGATCATCTAT+TGG - Chr3:98544761-98544780 None:intergenic 40.0%
GTTACTAAATCTTTCCGGCA+TGG - Chr3:98545540-98545559 None:intergenic 40.0%
GTTGAAGATGTGGAACAACT+AGG + Chr3:98547033-98547052 MsG0380017614.01.T01:CDS 40.0%
GTTGGAAATTGGTGCATCTA+AGG + Chr3:98548072-98548091 MsG0380017614.01.T01:intron 40.0%
TACATAAGCAGAACATGAGG+AGG + Chr3:98547751-98547770 MsG0380017614.01.T01:CDS 40.0%
TACCACAGAAATGACATGCT+TGG + Chr3:98546401-98546420 MsG0380017614.01.T01:intron 40.0%
TAGAGCCTCATCAAAATGTG+AGG + Chr3:98547898-98547917 MsG0380017614.01.T01:CDS 40.0%
TAGATGCACCAATTTCCAAC+TGG - Chr3:98548072-98548091 None:intergenic 40.0%
TAGCAGTGCTTTCCTTACTT+TGG + Chr3:98543606-98543625 MsG0380017614.01.T01:intron 40.0%
TATCTCCTTCTGTGTTCACA+GGG + Chr3:98546265-98546284 MsG0380017614.01.T01:CDS 40.0%
TCATCATTCAGAAAGTCCAC+TGG + Chr3:98545681-98545700 MsG0380017614.01.T01:intron 40.0%
TGAGAATCGGTTAAGCTTCT+GGG + Chr3:98542721-98542740 MsG0380017614.01.T01:five_prime_UTR 40.0%
TGCAGTAAGTACAGACAACA+TGG + Chr3:98545640-98545659 MsG0380017614.01.T01:intron 40.0%
TGGTATACCCATGGAAATTG+TGG + Chr3:98547113-98547132 MsG0380017614.01.T01:CDS 40.0%
TGTATGGATGACATGGTTAC+TGG + Chr3:98543314-98543333 MsG0380017614.01.T01:intron 40.0%
TTAGTTGTGCTCACTTCTTG+TGG - Chr3:98545255-98545274 None:intergenic 40.0%
TTATCTCCTTCTGTGTTCAC+AGG + Chr3:98546264-98546283 MsG0380017614.01.T01:CDS 40.0%
TTGAGAATCGGTTAAGCTTC+TGG + Chr3:98542720-98542739 MsG0380017614.01.T01:five_prime_UTR 40.0%
TTGCAAAGTAGCATTAGAGG+GGG - Chr3:98547557-98547576 None:intergenic 40.0%
TTTGCTCATAAATGTGACCG+GGG - Chr3:98544029-98544048 None:intergenic 40.0%
! AAACCACATGGCTGTTTCAT+TGG + Chr3:98548154-98548173 MsG0380017614.01.T01:CDS 40.0%
! AAGCATGTCATTTCTGTGGT+AGG - Chr3:98546402-98546421 None:intergenic 40.0%
! ACAACTGCTGTTTATGGCAA+AGG + Chr3:98547234-98547253 MsG0380017614.01.T01:CDS 40.0%
! ACCTCCTAGATGAACTCTTT+TGG + Chr3:98544242-98544261 MsG0380017614.01.T01:intron 40.0%
! AGGAATAGTCTCTAAAGGTG+TGG - Chr3:98544290-98544309 None:intergenic 40.0%
! ATGAACGTTTCCGTGTTGAT+CGG + Chr3:98542831-98542850 MsG0380017614.01.T01:intron 40.0%
! CAACTGCTGTTTATGGCAAA+GGG + Chr3:98547235-98547254 MsG0380017614.01.T01:CDS 40.0%
! CAGATGACAACTGCTGTTTA+TGG + Chr3:98547228-98547247 MsG0380017614.01.T01:CDS 40.0%
! CAGCATTTTCCCCTTTTCTT+TGG - Chr3:98546351-98546370 None:intergenic 40.0%
! GAAGCTTAACCGATTCTCAA+CGG - Chr3:98542720-98542739 None:intergenic 40.0%
! GAATGGCAACATCTGTGTTT+TGG - Chr3:98544807-98544826 None:intergenic 40.0%
! GAGCATCTATTTTCTACGTC+AGG - Chr3:98547174-98547193 None:intergenic 40.0%
! GATCATCATTTCCGTTTTGC+AGG + Chr3:98546978-98546997 MsG0380017614.01.T01:intron 40.0%
! TCCGTTTTGCAGGAAAATAC+TGG + Chr3:98546988-98547007 MsG0380017614.01.T01:intron 40.0%
! TCTTCTCGAGTTTTCTTAGC+TGG + Chr3:98543023-98543042 MsG0380017614.01.T01:intron 40.0%
!! AATGCTACTTTGCAATCCCT+GGG + Chr3:98547562-98547581 MsG0380017614.01.T01:intron 40.0%
!! ATATGGAAGTACCACGGAAT+TGG - Chr3:98545803-98545822 None:intergenic 40.0%
!! ATTTGACAACTTTGGGACTG+GGG - Chr3:98547452-98547471 None:intergenic 40.0%
!! CATTTGACAACTTTGGGACT+GGG - Chr3:98547453-98547472 None:intergenic 40.0%
!! GCAGAAATATGGAAGTACCA+CGG - Chr3:98545809-98545828 None:intergenic 40.0%
!! TAATGCTACTTTGCAATCCC+TGG + Chr3:98547561-98547580 MsG0380017614.01.T01:intron 40.0%
!! TATGGAAGTACCACGGAATT+GGG - Chr3:98545802-98545821 None:intergenic 40.0%
!! TTACTTAGCCTTATGGATGC+AGG + Chr3:98547966-98547985 MsG0380017614.01.T01:CDS 40.0%
!!! TACCCATTTTGGCTTCTTTC+AGG - Chr3:98546104-98546123 None:intergenic 40.0%
AACTTCACTGCAACGCAGAT+TGG + Chr3:98548351-98548370 MsG0380017614.01.T01:CDS 45.0%
AAGGCAATGTGAAGGGAAGA+CGG - Chr3:98546605-98546624 None:intergenic 45.0%
AAGGGCAGAAGGAGAAATCA+AGG + Chr3:98547277-98547296 MsG0380017614.01.T01:CDS 45.0%
AATTCTCCCCGGATGAAGTA+CGG + Chr3:98545916-98545935 MsG0380017614.01.T01:intron 45.0%
ACATCTAGCGGTGGAAATGA+CGG - Chr3:98544783-98544802 None:intergenic 45.0%
ACTATTGACAAGAGCGATGC+AGG + Chr3:98543898-98543917 MsG0380017614.01.T01:CDS 45.0%
AGACATTCCTGTTTCCGGAA+CGG - Chr3:98548461-98548480 None:intergenic 45.0%
AGAGAGGGGTTCGATTGTTT+CGG - Chr3:98542565-98542584 None:intergenic 45.0%
AGGCTAAGTAAATGCATGGC+AGG - Chr3:98547957-98547976 None:intergenic 45.0%
AGGGCAGAAGGAGAAATCAA+GGG + Chr3:98547278-98547297 MsG0380017614.01.T01:CDS 45.0%
ATTGCAATCACCAGGATAGG+AGG - Chr3:98548048-98548067 None:intergenic 45.0%
CAACGCAGATTGGAAGTTCA+TGG + Chr3:98548361-98548380 MsG0380017614.01.T01:CDS 45.0%
CAACTGGTATTGCAATCACC+AGG - Chr3:98548056-98548075 None:intergenic 45.0%
CAAGCAAGGGATTCAATAGG+TGG - Chr3:98545605-98545624 None:intergenic 45.0%
CAAGGGGTGATGAATGGAAA+AGG + Chr3:98546495-98546514 MsG0380017614.01.T01:CDS 45.0%
CACATCTGGCATCTCATGTA+CGG + Chr3:98548411-98548430 MsG0380017614.01.T01:CDS 45.0%
CACGCTTCCATAGGGTATAA+TGG + Chr3:98547660-98547679 MsG0380017614.01.T01:CDS 45.0%
CCAGTCCCAAAGTTGTCAAA+TGG + Chr3:98547451-98547470 MsG0380017614.01.T01:CDS 45.0%
CCTAGAGAGAGAAAGAGAGA+GGG - Chr3:98542580-98542599 None:intergenic 45.0%
CCTCTCTCTTTCTCTCTCTA+GGG + Chr3:98542578-98542597 MsG0380017614.01.T01:five_prime_UTR 45.0%
CCTGTGAAGCTGCAGAAATA+TGG - Chr3:98545820-98545839 None:intergenic 45.0%
CTAGAGAGAGAAAGAGAGAG+GGG - Chr3:98542579-98542598 None:intergenic 45.0%
CTCAATGCTCACACAAACGA+GGG - Chr3:98546871-98546890 None:intergenic 45.0%
CTCACTTCTTGTGGAAAGTC+TGG - Chr3:98545246-98545265 None:intergenic 45.0%
CTGGTGATTGCAATACCAGT+TGG + Chr3:98548054-98548073 MsG0380017614.01.T01:intron 45.0%
CTTCTGTGTTCACAGGGAAA+GGG + Chr3:98546271-98546290 MsG0380017614.01.T01:CDS 45.0%
GAAAGGCAACTGCAGTAAAC+TGG + Chr3:98546077-98546096 MsG0380017614.01.T01:intron 45.0%
GAATGGAAAAGGAAAGGAGG+AGG + Chr3:98546506-98546525 MsG0380017614.01.T01:CDS 45.0%
GACAGAACTTCACTCCAATC+TGG + Chr3:98547723-98547742 MsG0380017614.01.T01:CDS 45.0%
GAGCCTCATCAAAATGTGAG+GGG + Chr3:98547900-98547919 MsG0380017614.01.T01:CDS 45.0%
GCTAGGTGCTCCAAAAACAT+TGG - Chr3:98546679-98546698 None:intergenic 45.0%
GGACCTGAAAGAAGCCAAAA+TGG + Chr3:98546098-98546117 MsG0380017614.01.T01:CDS 45.0%
GGGGAATTTCAAATCGAAGG+AGG - Chr3:98547433-98547452 None:intergenic 45.0%
GGTATTGCAATCACCAGGAT+AGG - Chr3:98548051-98548070 None:intergenic 45.0%
GTGTCCCAACTCATACCATT+GGG + Chr3:98544264-98544283 MsG0380017614.01.T01:intron 45.0%
TATCCTCCAATCCGATCTCA+AGG - Chr3:98545179-98545198 None:intergenic 45.0%
TCAAAATGTGAGGGGCTCTT+TGG + Chr3:98547908-98547927 MsG0380017614.01.T01:CDS 45.0%
TCAATGCTCACACAAACGAG+GGG - Chr3:98546870-98546889 None:intergenic 45.0%
TCACGTACACCCTTCAATGT+TGG + Chr3:98547996-98548015 MsG0380017614.01.T01:CDS 45.0%
TCCATACTCCGTACTTCATC+CGG - Chr3:98545927-98545946 None:intergenic 45.0%
TCTATTCTGCAGGGATGAGT+TGG - Chr3:98548293-98548312 None:intergenic 45.0%
TCTCTTCTCTGTCCTTGTTG+TGG - Chr3:98546183-98546202 None:intergenic 45.0%
TCTGAGCAGGGAACATTAGA+TGG + Chr3:98547093-98547112 MsG0380017614.01.T01:CDS 45.0%
TCTTGAACATCCACCTTCCT+GGG - Chr3:98545856-98545875 None:intergenic 45.0%
TGCATCGCTCTTGTCAATAG+TGG - Chr3:98543899-98543918 None:intergenic 45.0%
TGGCAAAGAATCAGTACGAG+AGG + Chr3:98547142-98547161 MsG0380017614.01.T01:CDS 45.0%
TGTCATCTGTGTGTTCCTAC+TGG - Chr3:98547217-98547236 None:intergenic 45.0%
TGTCCAAAGCCGTTGAGAAT+CGG + Chr3:98542708-98542727 MsG0380017614.01.T01:five_prime_UTR 45.0%
TTATTTGTCGTGTGCCTGCA+AGG - Chr3:98546705-98546724 None:intergenic 45.0%
TTCAAATCGAAGGAGGGTTG+AGG - Chr3:98547426-98547445 None:intergenic 45.0%
TTCTCACATTTGGGCATCCT+TGG + Chr3:98547629-98547648 MsG0380017614.01.T01:CDS 45.0%
TTCTGTGTTCACAGGGAAAG+GGG + Chr3:98546272-98546291 MsG0380017614.01.T01:CDS 45.0%
TTGATTCCTGAGCCACAACA+AGG + Chr3:98546168-98546187 MsG0380017614.01.T01:CDS 45.0%
TTGCAATCACCAGGATAGGA+GGG - Chr3:98548047-98548066 None:intergenic 45.0%
TTGCTCATAAATGTGACCGG+GGG - Chr3:98544028-98544047 None:intergenic 45.0%
TTTCCTACGAGACAAACCAG+TGG - Chr3:98545700-98545719 None:intergenic 45.0%
! ACCCTATGGAAGCGTGATTT+GGG - Chr3:98547656-98547675 None:intergenic 45.0%
! AGTATGGCTTTTCAGAGAGC+TGG + Chr3:98545948-98545967 MsG0380017614.01.T01:intron 45.0%
! ATTGGTGCATCTAAGGCCAA+TGG + Chr3:98548079-98548098 MsG0380017614.01.T01:intron 45.0%
! CCATATTTCTGCAGCTTCAC+AGG + Chr3:98545817-98545836 MsG0380017614.01.T01:intron 45.0%
! CTTGAGGTGCTCTCTTGAAA+AGG - Chr3:98546624-98546643 None:intergenic 45.0%
! CTTTTCCATTCATCACCCCT+TGG - Chr3:98546497-98546516 None:intergenic 45.0%
! GATTTGATTCGCTACTGCGT+CGG - Chr3:98542632-98542651 None:intergenic 45.0%
! TAACCGATTCTCAACGGCTT+TGG - Chr3:98542714-98542733 None:intergenic 45.0%
! TACCCTATGGAAGCGTGATT+TGG - Chr3:98547657-98547676 None:intergenic 45.0%
! TGCCAAGCATGTCATTTCTG+TGG - Chr3:98546406-98546425 None:intergenic 45.0%
!! CCATTTGACAACTTTGGGAC+TGG - Chr3:98547454-98547473 None:intergenic 45.0%
!! TTCATTGGCTCTCCAACCTT+CGG + Chr3:98548169-98548188 MsG0380017614.01.T01:CDS 45.0%
!!! CTGTGTTTTGGCACATCTAG+CGG - Chr3:98544795-98544814 None:intergenic 45.0%
!!! TTTTATAACAAAAAAAAAAA+TGG - Chr3:98543243-98543262 None:intergenic 5.0%
AAATCGAAGGAGGGTTGAGG+TGG - Chr3:98547423-98547442 None:intergenic 50.0%
AAGAAAGCCGGAGTTGGACT+CGG + Chr3:98545055-98545074 MsG0380017614.01.T01:CDS 50.0%
AAGGAGGGTTGAGGTGGATA+CGG - Chr3:98547417-98547436 None:intergenic 50.0%
AATCCGATCTCAAGGTCTGG+AGG - Chr3:98545171-98545190 None:intergenic 50.0%
ACACCTGCAGATAACCATGC+CGG + Chr3:98545523-98545542 MsG0380017614.01.T01:CDS 50.0%
ACTGCATGCCTGCATCCATA+AGG - Chr3:98547977-98547996 None:intergenic 50.0%
AGGCCAATGGTACCCTGAAA+AGG + Chr3:98548092-98548111 MsG0380017614.01.T01:intron 50.0%
CACGCTCAAATTTCCCAGGA+AGG + Chr3:98545840-98545859 MsG0380017614.01.T01:intron 50.0%
CATACTCCGTACTTCATCCG+GGG - Chr3:98545925-98545944 None:intergenic 50.0%
CCATACTCCGTACTTCATCC+GGG - Chr3:98545926-98545945 None:intergenic 50.0%
CCCCAAATCACGCTTCCATA+GGG + Chr3:98547652-98547671 MsG0380017614.01.T01:CDS 50.0%
CCCTAGAGAGAGAAAGAGAG+AGG - Chr3:98542581-98542600 None:intergenic 50.0%
CCCTCTCTCTTTCTCTCTCT+AGG + Chr3:98542577-98542596 MsG0380017614.01.T01:five_prime_UTR 50.0%
CCGTCGAAAGCTCTGTCAAA+CGG + Chr3:98542676-98542695 MsG0380017614.01.T01:five_prime_UTR 50.0%
CCGTTTGACAGAGCTTTCGA+CGG - Chr3:98542679-98542698 None:intergenic 50.0%
CCTTCTGTGTTCACAGGGAA+AGG + Chr3:98546270-98546289 MsG0380017614.01.T01:CDS 50.0%
CCTTTCCCTGTGAACACAGA+AGG - Chr3:98546273-98546292 None:intergenic 50.0%
CGTACATGAGATGCCAGATG+TGG - Chr3:98548413-98548432 None:intergenic 50.0%
CTCAAAAGACCCTCCTATCC+TGG + Chr3:98548035-98548054 MsG0380017614.01.T01:CDS 50.0%
CTCTTGAACATCCACCTTCC+TGG - Chr3:98545857-98545876 None:intergenic 50.0%
CTTCCTCCAGACCTTGAGAT+CGG + Chr3:98545165-98545184 MsG0380017614.01.T01:intron 50.0%
GAATTCACCGTTCCGGAAAC+AGG + Chr3:98548451-98548470 MsG0380017614.01.T01:CDS 50.0%
GAGAGCTGCATTAGTGCAGT+TGG - Chr3:98544921-98544940 None:intergenic 50.0%
GAGCCAATGAAACAGCCATG+TGG - Chr3:98548160-98548179 None:intergenic 50.0%
GATGAAGATGCACCGAAGGT+TGG - Chr3:98548184-98548203 None:intergenic 50.0%
GCTCAAATTTCCCAGGAAGG+TGG + Chr3:98545843-98545862 MsG0380017614.01.T01:intron 50.0%
GCTCAATGCTCACACAAACG+AGG - Chr3:98546872-98546891 None:intergenic 50.0%
GGGAAAATGCTGCAAACCGA+TGG + Chr3:98546359-98546378 MsG0380017614.01.T01:intron 50.0%
GGGCAGAAGGAGAAATCAAG+GGG + Chr3:98547279-98547298 MsG0380017614.01.T01:CDS 50.0%
GGTGTCCCAACTCATACCAT+TGG + Chr3:98544263-98544282 MsG0380017614.01.T01:intron 50.0%
GTCATCAAACGCACCTTTCG+AGG - Chr3:98545723-98545742 None:intergenic 50.0%
GTCTCGTAGGAAACCTCGAA+AGG + Chr3:98545707-98545726 MsG0380017614.01.T01:intron 50.0%
GTGATGTGCTTGCACAACAG+TGG + Chr3:98543783-98543802 MsG0380017614.01.T01:five_prime_UTR 50.0%
GTGGCCCAATGGTATGAGTT+GGG - Chr3:98544271-98544290 None:intergenic 50.0%
GTGTAAGCTACATCCTCCCA+GGG - Chr3:98547581-98547600 None:intergenic 50.0%
TCCAATCCGATCTCAAGGTC+TGG - Chr3:98545174-98545193 None:intergenic 50.0%
TCCAGACCTTGAGATCGGAT+TGG + Chr3:98545170-98545189 MsG0380017614.01.T01:intron 50.0%
TGGGACAGGTGGTGAAGTAA+TGG + Chr3:98545421-98545440 MsG0380017614.01.T01:intron 50.0%
TGTGGCCCAATGGTATGAGT+TGG - Chr3:98544272-98544291 None:intergenic 50.0%
TGTGGTCTTTAACGGCACAG+AGG - Chr3:98548395-98548414 None:intergenic 50.0%
TGTGTAAGCTACATCCTCCC+AGG - Chr3:98547582-98547601 None:intergenic 50.0%
TTCCTTAATGCACACTCCCC+CGG + Chr3:98544009-98544028 MsG0380017614.01.T01:intron 50.0%
TTTCCGGCATGGTTATCTGC+AGG - Chr3:98545529-98545548 None:intergenic 50.0%
! AATCAGACGGCTGCCTTTTC+AGG - Chr3:98548108-98548127 None:intergenic 50.0%
! AGACCTTGAGATCGGATTGG+AGG + Chr3:98545173-98545192 MsG0380017614.01.T01:intron 50.0%
! ATCAGACGGCTGCCTTTTCA+GGG - Chr3:98548107-98548126 None:intergenic 50.0%
! CCCTATGGAAGCGTGATTTG+GGG - Chr3:98547655-98547674 None:intergenic 50.0%
! GCGATGGAGCACTTGTTACT+TGG - Chr3:98545212-98545231 None:intergenic 50.0%
! GTGCCGTTAAAGACCACATC+TGG + Chr3:98548397-98548416 MsG0380017614.01.T01:CDS 50.0%
! TCTCTAAAGGTGTGGCCCAA+TGG - Chr3:98544282-98544301 None:intergenic 50.0%
!! AGTCCACTGGTTTGTCTCGT+AGG + Chr3:98545694-98545713 MsG0380017614.01.T01:intron 50.0%
!! CTGCCTTTTCAGGGTACCAT+TGG - Chr3:98548098-98548117 None:intergenic 50.0%
!! GAGCCCCTCACATTTTGATG+AGG - Chr3:98547906-98547925 None:intergenic 50.0%
!!! TGTTTTGGCACATCTAGCGG+TGG - Chr3:98544792-98544811 None:intergenic 50.0%
AGGTCCTGGAGTCTTCAGCA+GGG + Chr3:98547836-98547855 MsG0380017614.01.T01:CDS 55.0%
CAGGCACGCTCAAATTTCCC+AGG + Chr3:98545836-98545855 MsG0380017614.01.T01:intron 55.0%
CCCAGCTGAATTCACCGTTC+CGG + Chr3:98548444-98548463 MsG0380017614.01.T01:CDS 55.0%
CCCGGATGAAGTACGGAGTA+TGG + Chr3:98545923-98545942 MsG0380017614.01.T01:intron 55.0%
CCGGAACGGTGAATTCAGCT+GGG - Chr3:98548447-98548466 None:intergenic 55.0%
GAGCACCTAGCATTCCTTGC+AGG + Chr3:98546688-98546707 MsG0380017614.01.T01:CDS 55.0%
GCATCTTCATCAGCCCAGCA+TGG + Chr3:98548193-98548212 MsG0380017614.01.T01:CDS 55.0%
GCCCCAAATCACGCTTCCAT+AGG + Chr3:98547651-98547670 MsG0380017614.01.T01:CDS 55.0%
GGAGTCTTCAGCAGGGTGAA+TGG + Chr3:98547843-98547862 MsG0380017614.01.T01:CDS 55.0%
GGCTGATGAAGATGCACCGA+AGG - Chr3:98548188-98548207 None:intergenic 55.0%
GTGTGCCTGCAAGGAATGCT+AGG - Chr3:98546696-98546715 None:intergenic 55.0%
TATTCCGCGCACTACCAAGC+TGG - Chr3:98547504-98547523 None:intergenic 55.0%
TCCGGAACGGTGAATTCAGC+TGG - Chr3:98548448-98548467 None:intergenic 55.0%
TGTGTTCACAGGGAAAGGGG+TGG + Chr3:98546275-98546294 MsG0380017614.01.T01:intron 55.0%
TTCACCCTGCTGAAGACTCC+AGG - Chr3:98547843-98547862 None:intergenic 55.0%
! CTCTGTCCTTGTTGTGGCTC+AGG - Chr3:98546177-98546196 None:intergenic 55.0%
! CTTCTGGGAGAGATCGTGTG+CGG + Chr3:98542736-98542755 MsG0380017614.01.T01:five_prime_UTR 55.0%
! GCTACTTTGCAATCCCTGGG+AGG + Chr3:98547565-98547584 MsG0380017614.01.T01:intron 55.0%
! GGGGGAGTGTGCATTAAGGA+AGG - Chr3:98544010-98544029 None:intergenic 55.0%
!! CTAACCAGCTTGGTAGTGCG+CGG + Chr3:98547497-98547516 MsG0380017614.01.T01:intron 55.0%
CAGGTCCTGGAGTCTTCAGC+AGG + Chr3:98547835-98547854 MsG0380017614.01.T01:CDS 60.0%
GATCGTGTGCGGTGATCCAC+AGG + Chr3:98542747-98542766 MsG0380017614.01.T01:five_prime_UTR 60.0%
GGTACACGCGAACTCACCTG+TGG - Chr3:98542766-98542785 None:intergenic 60.0%
GTTGGACTCGGCAGCGGAAT+TGG + Chr3:98545067-98545086 MsG0380017614.01.T01:CDS 60.0%
! AGCAGCTGAGGTGTCTGAGC+AGG + Chr3:98547080-98547099 MsG0380017614.01.T01:CDS 60.0%
! GACCGGGGGAGTGTGCATTA+AGG - Chr3:98544014-98544033 None:intergenic 60.0%
! GCAGCTGAGGTGTCTGAGCA+GGG + Chr3:98547081-98547100 MsG0380017614.01.T01:CDS 60.0%
! GGAAGCGTGATTTGGGGCCA+AGG - Chr3:98547649-98547668 None:intergenic 60.0%
TCCGCTGCCGAGTCCAACTC+CGG - Chr3:98545065-98545084 None:intergenic 65.0%
GCCGGAGTTGGACTCGGCAG+CGG + Chr3:98545061-98545080 MsG0380017614.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 98542491 98548486 98542491 ID=MsG0380017614.01;Name=MsG0380017614.01
Chr3 mRNA 98542491 98548486 98542491 ID=MsG0380017614.01.T01;Parent=MsG0380017614.01;Name=MsG0380017614.01.T01;_AED=0.23;_eAED=0.23;_QI=384|0.33|0.2|1|0.88|0.8|10|0|739
Chr3 exon 98542491 98542768 98542491 ID=MsG0380017614.01.T01:exon:6439;Parent=MsG0380017614.01.T01
Chr3 exon 98543741 98543944 98543741 ID=MsG0380017614.01.T01:exon:6440;Parent=MsG0380017614.01.T01
Chr3 exon 98544910 98545088 98544910 ID=MsG0380017614.01.T01:exon:6441;Parent=MsG0380017614.01.T01
Chr3 exon 98545175 98545260 98545175 ID=MsG0380017614.01.T01:exon:6442;Parent=MsG0380017614.01.T01
Chr3 exon 98545460 98545554 98545460 ID=MsG0380017614.01.T01:exon:6443;Parent=MsG0380017614.01.T01
Chr3 exon 98546092 98546293 98546092 ID=MsG0380017614.01.T01:exon:6444;Parent=MsG0380017614.01.T01
Chr3 exon 98546447 98546752 98546447 ID=MsG0380017614.01.T01:exon:6445;Parent=MsG0380017614.01.T01
Chr3 exon 98547000 98547479 98547000 ID=MsG0380017614.01.T01:exon:6446;Parent=MsG0380017614.01.T01
Chr3 exon 98547618 98548056 98547618 ID=MsG0380017614.01.T01:exon:6447;Parent=MsG0380017614.01.T01
Chr3 exon 98548152 98548486 98548152 ID=MsG0380017614.01.T01:exon:6448;Parent=MsG0380017614.01.T01
Chr3 five_prime_UTR 98542491 98542768 98542491 ID=MsG0380017614.01.T01:five_prime_utr;Parent=MsG0380017614.01.T01
Chr3 five_prime_UTR 98543741 98543846 98543741 ID=MsG0380017614.01.T01:five_prime_utr;Parent=MsG0380017614.01.T01
Chr3 CDS 98543847 98543944 98543847 ID=MsG0380017614.01.T01:cds;Parent=MsG0380017614.01.T01
Chr3 CDS 98544910 98545088 98544910 ID=MsG0380017614.01.T01:cds;Parent=MsG0380017614.01.T01
Chr3 CDS 98545175 98545260 98545175 ID=MsG0380017614.01.T01:cds;Parent=MsG0380017614.01.T01
Chr3 CDS 98545460 98545554 98545460 ID=MsG0380017614.01.T01:cds;Parent=MsG0380017614.01.T01
Chr3 CDS 98546092 98546293 98546092 ID=MsG0380017614.01.T01:cds;Parent=MsG0380017614.01.T01
Chr3 CDS 98546447 98546752 98546447 ID=MsG0380017614.01.T01:cds;Parent=MsG0380017614.01.T01
Chr3 CDS 98547000 98547479 98547000 ID=MsG0380017614.01.T01:cds;Parent=MsG0380017614.01.T01
Chr3 CDS 98547618 98548056 98547618 ID=MsG0380017614.01.T01:cds;Parent=MsG0380017614.01.T01
Chr3 CDS 98548152 98548486 98548152 ID=MsG0380017614.01.T01:cds;Parent=MsG0380017614.01.T01
Gene Sequence

>MsG0380017614.01.T01

ATGGGATCGTCGTATGTTGAGATTGACTCGATCTCTATTGATCTTAATACCACTATTGACAAGAGCGATGCAGGCAAATGTGAACATTTTTCAATACGATCTGATACCAACTGCACTAATGCAGCTCTCAAACCTTGTATTCAGAAAGATCCAATATCTGACATTATTGTGAGAAGAGACATTGATCTTAATGCTAACCTGAATAGTGTCGATTGTTTCTTACCAATTACTATTGAGAAAGAAAAGAAAGCCGGAGTTGGACTCGGCAGCGGAATTGACCTTGAGATCGGATTGGAGGATAATCTCAATCACCAAGTAACAAGTGCTCCATCGCCTAAAATTTATCCAGACTTTCCACAAGAACTTGCTAAAAATCTTAGACTTAAATGCACGGGTAAGAATTCTGCTGAGATTTTTAATGGGGGAACACCTGCAGATAACCATGCCGGAAAGATTTATAAACTGGACCTGAAAGAAGCCAAAATGGGTAAGAAGAAGAAGAACAAAAAGAATCAAGTTGGAGACAATTATTACTTGATTCCTGAGCCACAACAAGGACAGAGAAGAGAAAATGAGGACACCGTGTATACTACAGATAAGGCATATGCATCTAAAACTGTTTCTTCTAGATTATCTCCTTCTGTGTTCACAGGGAAAGGGGGTAAAATCAGGTCTAGTGTTGCTGCAGATGTTCCAGTTCCTTCAGACCAAGGGGTGATGAATGGAAAAGGAAAGGAGGAGGGTTTGCATCTTTCTTTGAACAGTTATATGTCAGAACATGGTTACAACAAAAAATGTATCCATCAAATAGAAAACCGTCTTCCCTTCACATTGCCTTTTCAAGAGAGCACCTCAAGAGTTCCTCAGTTTAATAGAAACGATAGTGAAACCAATGTTTTTGGAGCACCTAGCATTCCTTGCAGGCACACGACAAATAATATTTATGGAAAAGGAGTTCACTGTAAAGAAAATACTGGTGCAAGAAACACAGGAAAAACTGTTGAAGATGTGGAACAACTAGGTATTAAAAACAGATACAATGAACAAGCAGCTGAGGTGTCTGAGCAGGGAACATTAGATGGTATACCCATGGAAATTGTGGAACTCATGGCAAAGAATCAGTACGAGAGGTGTCTCCCTGACGTAGAAAATAGATGCTCAATGTTTGAAAAATCTTCTACCAGTAGGAACACACAGATGACAACTGCTGTTTATGGCAAAGGGAAGATGAGCTTGTTAAAAGAAGGGCAGAAGGAGAAATCAAGGGGTAGACCTAAGAAAAATAACATGGTCACAAGAGGAGAGAATGTGAAGCCTAACAAAAGAAAGCCAAATCATTACTTTTCTCCATTCAATGGAAGTAATTTGGGAGTGAACAATCCGTATCCACCTCAACCCTCCTTCGATTTGAAATTCCCCAGTCCCAAAGTTGTCAAATGGATTCCAGATGATGAAGCTTCTCACATTTGGGCATCCTTGGCCCCAAATCACGCTTCCATAGGGTATAATGGATTGCAAAAGGTTGTTTCTCAGCCTAGTAGTAGCAACATAGACAGAACTTCACTCCAATCTGGTGCATTACATAAGCAGAACATGAGGAGGGATATTGATCTTAACTATACAAATATCAATGCTACAGGCCAAGAAAAGCATAGTAGAAATACAGGTCCTGGAGTCTTCAGCAGGGTGAATGGAGAATACTCAGTTCCATGCAAACATAATGGAATAGAGCCTCATCAAAATGTGAGGGGCTCTTTGGATTTGTATTCTAATGAGACTATACCTGCCATGCATTTACTTAGCCTTATGGATGCAGGCATGCAGTCACGTACACCCTTCAATGTTGGTGTTAATGCTCAAATGCTCAAAAGACCCTCCTATCCTGATAAACCACATGGCTGTTTCATTGGCTCTCCAACCTTCGGTGCATCTTCATCAGCCCAGCATGGTAATAAGTTTACAAAAGATGATGGTTCCAATGCTCAAAATTCAACTAAGTTTGGAAAGAAAGAAATGAAGAGCTCCAACTCATCCCTGCAGAATAGATTTGTTAAGCAGTGTAGCTTGTCTTGTAACGAAACAGAAACTTCACTGCAACGCAGATTGGAAGTTCATGGTGCTCACACCTCTGTGCCGTTAAAGACCACATCTGGCATCTCATGTACGGTGAATAGAAACCCAGCTGAATTCACCGTTCCGGAAACAGGAATGTCTATATGA
Protein sequence

>MsG0380017614.01.T01

MGSSYVEIDSISIDLNTTIDKSDAGKCEHFSIRSDTNCTNAALKPCIQKDPISDIIVRRDIDLNANLNSVDCFLPITIEKEKKAGVGLGSGIDLEIGLEDNLNHQVTSAPSPKIYPDFPQELAKNLRLKCTGKNSAEIFNGGTPADNHAGKIYKLDLKEAKMGKKKKNKKNQVGDNYYLIPEPQQGQRRENEDTVYTTDKAYASKTVSSRLSPSVFTGKGGKIRSSVAADVPVPSDQGVMNGKGKEEGLHLSLNSYMSEHGYNKKCIHQIENRLPFTLPFQESTSRVPQFNRNDSETNVFGAPSIPCRHTTNNIYGKGVHCKENTGARNTGKTVEDVEQLGIKNRYNEQAAEVSEQGTLDGIPMEIVELMAKNQYERCLPDVENRCSMFEKSSTSRNTQMTTAVYGKGKMSLLKEGQKEKSRGRPKKNNMVTRGENVKPNKRKPNHYFSPFNGSNLGVNNPYPPQPSFDLKFPSPKVVKWIPDDEASHIWASLAPNHASIGYNGLQKVVSQPSSSNIDRTSLQSGALHKQNMRRDIDLNYTNINATGQEKHSRNTGPGVFSRVNGEYSVPCKHNGIEPHQNVRGSLDLYSNETIPAMHLLSLMDAGMQSRTPFNVGVNAQMLKRPSYPDKPHGCFIGSPTFGASSSAQHGNKFTKDDGSNAQNSTKFGKKEMKSSNSSLQNRFVKQCSLSCNETETSLQRRLEVHGAHTSVPLKTTSGISCTVNRNPAEFTVPETGMSI*