AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014488.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014488.01.T01 MTR_3g058500 92.000 200 10 1 195 394 291 484 4.58e-125 379
MsG0380014488.01.T01 MTR_3g058500 84.186 215 12 2 1 194 1 214 2.81e-121 369
MsG0380014488.01.T01 MTR_3g058500 72.973 111 8 2 391 481 545 653 1.56e-36 143
MsG0380014488.01.T01 MTR_2g026390 43.779 217 88 5 5 194 7 216 6.17e-47 173
MsG0380014488.01.T01 MTR_2g026390 36.290 248 137 8 160 394 250 489 1.61e-30 125
MsG0380014488.01.T01 MTR_5g055210 37.931 203 111 4 8 202 23 218 2.03e-30 125
MsG0380014488.01.T01 MTR_5g055210 48.000 100 51 1 296 394 390 489 4.52e-22 100
MsG0380014488.01.T01 MTR_5g055210 48.000 100 51 1 296 394 207 306 4.14e-22 99.4
MsG0380014488.01.T01 MTR_5g055210 48.000 100 51 1 296 394 285 384 5.90e-22 99.4
MsG0380014488.01.T01 MTR_5g055210 45.977 87 47 0 116 202 27 113 3.38e-18 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014488.01.T01 AT5G55600 52.273 220 75 4 1 193 1 217 9.07e-64 219
MsG0380014488.01.T01 AT5G55600 57.500 120 50 1 276 394 363 482 1.66e-38 149
MsG0380014488.01.T01 AT5G55600 52.273 220 75 4 1 193 1 217 9.07e-64 219
MsG0380014488.01.T01 AT5G55600 57.500 120 50 1 276 394 363 482 1.66e-38 149
MsG0380014488.01.T01 AT5G55600 52.273 220 75 4 1 193 1 217 9.07e-64 219
MsG0380014488.01.T01 AT5G55600 57.500 120 50 1 276 394 363 482 1.66e-38 149
MsG0380014488.01.T01 AT1G68580 30.500 200 115 5 8 193 10 199 2.20e-20 94.7
MsG0380014488.01.T01 AT1G68580 45.455 99 50 3 300 394 369 467 2.53e-18 88.6
MsG0380014488.01.T01 AT1G68580 30.500 200 115 5 8 193 10 199 5.60e-20 93.2
MsG0380014488.01.T01 AT1G68580 45.455 99 50 3 300 394 369 467 2.21e-18 88.2
MsG0380014488.01.T01 AT1G68580 45.455 99 50 3 300 394 273 371 1.96e-18 87.8
MsG0380014488.01.T01 AT1G68580 46.575 73 39 0 121 193 31 103 2.96e-18 87.4
MsG0380014488.01.T01 AT1G68580 46.575 73 39 0 121 193 81 153 2.52e-18 88.2
MsG0380014488.01.T01 AT1G68580 45.455 99 50 3 300 394 323 421 3.90e-18 87.8
MsG0380014488.01.T01 AT1G68580 46.575 73 39 0 121 193 31 103 2.66e-18 88.2
MsG0380014488.01.T01 AT1G68580 45.455 99 50 3 300 394 273 371 2.80e-18 88.2

Find 171 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCATTAGAATTAGGGTTTA+TGG 0.112675 3:-55561305 None:intergenic
GAACCATTATGTTGCTTATT+TGG 0.118537 3:+55556735 MsG0380014488.01.T01:CDS
CCTATCATGCCATTAGAATT+AGG 0.149551 3:-55561313 None:intergenic
CCTCACTTTGTCTCCATCTT+TGG 0.174164 3:+55559807 MsG0380014488.01.T01:CDS
TGCAGAAATGGGATCCAAAT+TGG 0.187564 3:+55556565 MsG0380014488.01.T01:CDS
CTTCCGGTTTATGATATTTC+GGG 0.219832 3:+55561439 MsG0380014488.01.T01:three_prime_UTR
GGAGCAAATGTTCAAAGTTT+TGG 0.225286 3:+55561592 MsG0380014488.01.T01:three_prime_UTR
GAGATTGCTTTCTCTGAAAA+AGG 0.226490 3:+55557316 MsG0380014488.01.T01:CDS
GATAATTTGGAGTTACTCTT+TGG 0.247547 3:-55556472 None:intergenic
GATGTCTGAATTGGATAATT+TGG 0.248357 3:-55556485 None:intergenic
AAGGGCTTCTTACCCCAATT+TGG 0.253554 3:-55556579 None:intergenic
TGTCTCATCTCAAGTTTATC+AGG 0.263134 3:-55559162 None:intergenic
TCTTCCGGTTTATGATATTT+CGG 0.274364 3:+55561438 MsG0380014488.01.T01:three_prime_UTR
AATTTACAACTTGGAAAGTT+TGG 0.277901 3:-55557277 None:intergenic
ATGGCGGCCTGCTCATAATT+TGG 0.290334 3:+55556283 MsG0380014488.01.T01:CDS
CCTAATTCTAATGGCATGAT+AGG 0.296993 3:+55561313 MsG0380014488.01.T01:three_prime_UTR
TGTTATTGCAGAGGAGTTCT+TGG 0.306744 3:+55555608 MsG0380014488.01.T01:CDS
AGTTTCTCTTCAACAATATC+AGG 0.307576 3:-55559898 None:intergenic
CTATCATGCCATTAGAATTA+GGG 0.310906 3:-55561312 None:intergenic
ATTCCCCGGCAGAATCCTTT+AGG 0.323969 3:-55555536 None:intergenic
AATGCCAATTGGAGTAATAT+TGG 0.333019 3:+55562485 MsG0380014488.01.T01:three_prime_UTR
GTATCCGAGGCTGCTGGTTC+AGG 0.342948 3:+55557411 MsG0380014488.01.T01:CDS
TTGGATTTCAAATTACAGTA+TGG 0.344400 3:+55556264 MsG0380014488.01.T01:CDS
CATCTTGAACATCATCATAT+TGG 0.348306 3:-55557472 None:intergenic
CACAGGAGAAGATGAAGATT+TGG 0.355505 3:+55557133 MsG0380014488.01.T01:CDS
GCAGAAATGGGATCCAAATT+GGG 0.363178 3:+55556566 MsG0380014488.01.T01:CDS
AAGATTCTAGTTGGATTGCT+TGG 0.365584 3:+55561281 MsG0380014488.01.T01:three_prime_UTR
AAAGTTTGGTATCCCATCAT+TGG 0.367954 3:-55557263 None:intergenic
AGAGGGTAACATTAGTCTTC+CGG 0.375780 3:+55561423 MsG0380014488.01.T01:three_prime_UTR
TATCCAATTCAGACATCGTT+TGG 0.378163 3:+55556491 MsG0380014488.01.T01:CDS
TGACCAAACGATGTCTGAAT+TGG 0.380608 3:-55556494 None:intergenic
AAGGGGTTAGGAAGTTGATT+AGG 0.389626 3:+55557234 MsG0380014488.01.T01:CDS
CGAGCCAATATTACTCCAAT+TGG 0.404954 3:-55562489 None:intergenic
GCCATAAACCCTAATTCTAA+TGG 0.409224 3:+55561304 MsG0380014488.01.T01:three_prime_UTR
CCTCCAAATAAGCAACATAA+TGG 0.410956 3:-55556738 None:intergenic
AATTGTGAATGTTATAAGTT+GGG 0.413370 3:+55562455 MsG0380014488.01.T01:three_prime_UTR
ATCGGTCATCGAAACTTTGA+TGG 0.413436 3:+55561349 MsG0380014488.01.T01:three_prime_UTR
GAGGAGTTCTTGGAAATTTG+TGG 0.418318 3:+55555618 MsG0380014488.01.T01:CDS
CTAACGGTCGAGAAGGGGTT+AGG 0.422030 3:+55557222 MsG0380014488.01.T01:CDS
CACCCTTGACTTCCTGATTG+TGG 0.427838 3:-55556813 None:intergenic
AGATTCTAGTTGGATTGCTT+GGG 0.433982 3:+55561282 MsG0380014488.01.T01:three_prime_UTR
TGTTCTTCAAGAGGTGGAGC+TGG 0.438624 3:-55559207 None:intergenic
AACCTGGCCGGTCGACCATC+AGG 0.441895 3:+55559184 MsG0380014488.01.T01:CDS
GCCTTGCATAATTTACAACT+TGG 0.442585 3:-55557286 None:intergenic
CATCTCAAGTTTATCAGGCT+TGG 0.443426 3:-55559157 None:intergenic
TTATTGTAAAAGATTCTAGT+TGG 0.445670 3:+55561272 MsG0380014488.01.T01:three_prime_UTR
GAAGATGAAGATTTGGATGT+TGG 0.448739 3:+55557140 MsG0380014488.01.T01:CDS
GTTCTTGGAAATTTGTGGAA+TGG 0.450597 3:+55555623 MsG0380014488.01.T01:CDS
CATCTTCAATATCACCAACT+TGG 0.455980 3:-55559986 None:intergenic
ATTTCGGGAATGTATCTAGA+TGG 0.457223 3:+55561454 MsG0380014488.01.T01:three_prime_UTR
TGCTGAGAGACTCGGGGTTG+TGG 0.458899 3:-55557103 None:intergenic
CCATGCATGATTAACCAAAC+TGG 0.459720 3:-55561518 None:intergenic
CGCCACTTGAAGAGATTTGA+AGG 0.462933 3:+55562510 MsG0380014488.01.T01:three_prime_UTR
TAAAGAGAGGAATCTAAAAC+AGG 0.463990 3:-55561199 None:intergenic
CTTAGCACTTCTACTCCTCT+TGG 0.464617 3:-55557183 None:intergenic
TCATGCATGGCAAGAAGGAT+TGG 0.469395 3:+55561531 MsG0380014488.01.T01:three_prime_UTR
GGCCTGATGGTCGACCGGCC+AGG 0.474559 3:-55559186 None:intergenic
AATTCAGACATCGTTTGGTC+AGG 0.475598 3:+55556496 MsG0380014488.01.T01:CDS
GAAGGATTGGTTTCTAGTGA+TGG 0.477780 3:+55561544 MsG0380014488.01.T01:three_prime_UTR
TGGAGGATATGTATGAAGAT+AGG 0.478711 3:+55556755 MsG0380014488.01.T01:CDS
AACTGCAAGGAATGATTCCC+CGG 0.479312 3:-55555550 None:intergenic
GAGGCTGTTGCTGAGAGACT+CGG 0.480968 3:-55557111 None:intergenic
ATTGACATCTCATGCTTTGA+CGG 0.482458 3:+55561570 MsG0380014488.01.T01:three_prime_UTR
ATAGCGATGCAAAGGTGATT+CGG 0.485856 3:+55560072 MsG0380014488.01.T01:CDS
AGGCTGTTGCTGAGAGACTC+GGG 0.485900 3:-55557110 None:intergenic
GAATCATTCCTTGCAGTTGT+CGG 0.487099 3:+55555555 MsG0380014488.01.T01:CDS
ATAGGATCACAAGCTCTAAT+CGG 0.487311 3:+55561331 MsG0380014488.01.T01:three_prime_UTR
TGGGGAACACTAATGCCAAT+TGG 0.491570 3:+55562474 MsG0380014488.01.T01:three_prime_UTR
CAAGAGGAGTAGAAGTGCTA+AGG 0.492686 3:+55557184 MsG0380014488.01.T01:CDS
GGCTTGGCCAACTTAAAAGC+AGG 0.493219 3:-55559141 None:intergenic
CTTGTCATCAACCTTGTATG+TGG 0.496161 3:-55557363 None:intergenic
AGAGAAAGCAATCTCCTATC+CGG 0.497849 3:-55557308 None:intergenic
GTCGATGCATGGTGGAGTGA+TGG 0.498558 3:+55559258 MsG0380014488.01.T01:CDS
AAGGTGGTTTCACCACAATC+AGG 0.498870 3:+55556801 MsG0380014488.01.T01:CDS
CTAGCTCATAAGATCGCAAA+TGG 0.499196 3:+55556308 MsG0380014488.01.T01:CDS
CCATTATGTTGCTTATTTGG+AGG 0.499705 3:+55556738 MsG0380014488.01.T01:CDS
GATTAGGAGTAATCCAATGA+TGG 0.500360 3:+55557250 MsG0380014488.01.T01:CDS
ATTCCCGAAATATCATAAAC+CGG 0.503817 3:-55561442 None:intergenic
TATAGTTCACTATTACCTAA+AGG 0.504218 3:+55555521 MsG0380014488.01.T01:CDS
CAAGAGTTGATTGCCGAGGT+TGG 0.506135 3:+55559228 MsG0380014488.01.T01:CDS
GGTTTATTAGACTTCTCAGC+AGG 0.507837 3:-55559877 None:intergenic
TCTCTCAGCAACAGCCTCAC+AGG 0.508253 3:+55557116 MsG0380014488.01.T01:CDS
AGTCTTCTAACGGTCGAGAA+GGG 0.510609 3:+55557216 MsG0380014488.01.T01:CDS
TTGGAACCGCCGTCGATGCA+TGG 0.511987 3:+55559247 MsG0380014488.01.T01:CDS
AACTCTTGTTCTTCAAGAGG+TGG 0.514625 3:-55559213 None:intergenic
TTGACATCTCATGCTTTGAC+GGG 0.517147 3:+55561571 MsG0380014488.01.T01:three_prime_UTR
TAAATTATGCAAGGCCGGAT+AGG 0.519189 3:+55557294 MsG0380014488.01.T01:CDS
TTGGTTTGATCCCACATACA+AGG 0.520051 3:+55557352 MsG0380014488.01.T01:CDS
ATTGTCACTCAGAGTGTTGG+TGG 0.523420 3:+55561640 MsG0380014488.01.T01:three_prime_UTR
CAATTGTGAATGTTATAAGT+TGG 0.527648 3:+55562454 MsG0380014488.01.T01:three_prime_UTR
TACACCTGAACCAGCAGCCT+CGG 0.528435 3:-55557415 None:intergenic
GAGCTGGCCTGATGGTCGAC+CGG 0.528619 3:-55559191 None:intergenic
GTTAATCATGCATGGCAAGA+AGG 0.530329 3:+55561526 MsG0380014488.01.T01:three_prime_UTR
AAAAGGTTGATTGTCAACCT+TGG 0.536017 3:+55557333 MsG0380014488.01.T01:CDS
TCGATGCATGGTGGAGTGAT+GGG 0.539124 3:+55559259 MsG0380014488.01.T01:CDS
TATTACCTAAAGGATTCTGC+CGG 0.539895 3:+55555531 MsG0380014488.01.T01:CDS
ATCGACGGCGGTTCCAACCT+CGG 0.539976 3:-55559241 None:intergenic
TCCAAGTTGTAAATTATGCA+AGG 0.541812 3:+55557285 MsG0380014488.01.T01:CDS
GTTCAAGATGAAGATGGAAG+TGG 0.543374 3:+55557485 MsG0380014488.01.T01:CDS
GGATATGTATGAAGATAGGA+GGG 0.543811 3:+55556759 MsG0380014488.01.T01:CDS
AGAAGTTAGTGCACGAATGG+TGG 0.544357 3:+55556340 MsG0380014488.01.T01:CDS
GATGATGTTCAAGATGAAGA+TGG 0.547654 3:+55557479 MsG0380014488.01.T01:CDS
ATCTTCAATATCACCAACTT+GGG 0.547805 3:-55559985 None:intergenic
GTTCAGGTGTACAATTGTAC+AGG 0.551822 3:+55557427 MsG0380014488.01.T01:CDS
GTCCTTCAAATCTCTTCAAG+TGG 0.554301 3:-55562512 None:intergenic
AAGAGGAGTAGAAGTGCTAA+GGG 0.554787 3:+55557185 MsG0380014488.01.T01:CDS
AGGATATGTATGAAGATAGG+AGG 0.555793 3:+55556758 MsG0380014488.01.T01:CDS
AGTTGTAAATTATGCAAGGC+CGG 0.557828 3:+55557289 MsG0380014488.01.T01:CDS
CAGTCTTCTAACGGTCGAGA+AGG 0.558109 3:+55557215 MsG0380014488.01.T01:CDS
CCAGTTTGGTTAATCATGCA+TGG 0.558267 3:+55561518 MsG0380014488.01.T01:three_prime_UTR
TGCACGAATGGTGGATGACA+AGG 0.561322 3:+55556349 MsG0380014488.01.T01:CDS
ATCAACTCTTGTTCTTCAAG+AGG 0.561430 3:-55559216 None:intergenic
ATTACCTAAAGGATTCTGCC+GGG 0.564646 3:+55555532 MsG0380014488.01.T01:CDS
AAGAGGTGGAGCTGGCCTGA+TGG 0.565217 3:-55559199 None:intergenic
TCACCACAATCAGGAAGTCA+AGG 0.566128 3:+55556810 MsG0380014488.01.T01:CDS
ATCACTCCACCATGCATCGA+CGG 0.566290 3:-55559256 None:intergenic
CAAGGTTGATGACAAGATAG+AGG 0.568710 3:+55557370 MsG0380014488.01.T01:CDS
TTGTGGAATGGAATTCCACC+TGG 0.569517 3:+55555635 MsG0380014488.01.T01:CDS
CCAAAGATGGAGACAAAGTG+AGG 0.574576 3:-55559807 None:intergenic
GCTAGTGCCAAATTATGAGC+AGG 0.576048 3:-55556290 None:intergenic
CAAAGAAGTTAGTGCACGAA+TGG 0.576933 3:+55556337 MsG0380014488.01.T01:CDS
GTCTTCTAACGGTCGAGAAG+GGG 0.578103 3:+55557217 MsG0380014488.01.T01:CDS
ATTAGGAGTAATCCAATGAT+GGG 0.578224 3:+55557251 MsG0380014488.01.T01:CDS
TAATGAGAATAGCGATGCAA+AGG 0.580442 3:+55560064 MsG0380014488.01.T01:CDS
GTTGGTGATATTGAAGATGA+TGG 0.587520 3:+55559990 MsG0380014488.01.T01:CDS
CAGAAATGGGATCCAAATTG+GGG 0.587938 3:+55556567 MsG0380014488.01.T01:CDS
GAAGCATGATCATATTTGCA+AGG 0.592720 3:+55561476 MsG0380014488.01.T01:three_prime_UTR
GTACAATTGTACAGGTAGCT+CGG 0.594102 3:+55557435 MsG0380014488.01.T01:CDS
GGTTCTCCTCAGTCTTCTAA+CGG 0.596785 3:+55557206 MsG0380014488.01.T01:CDS
ATATGTATGAAGATAGGAGG+GGG 0.597580 3:+55556761 MsG0380014488.01.T01:CDS
GAGGTACTCTGTCAAGATAG+TGG 0.599825 3:+55557389 MsG0380014488.01.T01:CDS
ATAGTGGTATCCGAGGCTGC+TGG 0.600674 3:+55557405 MsG0380014488.01.T01:CDS
TTACTCAACTATGTTACAAG+AGG 0.600726 3:+55561405 MsG0380014488.01.T01:three_prime_UTR
GATTTCAAATTACAGTATGG+CGG 0.601186 3:+55556267 MsG0380014488.01.T01:CDS
ACGTGCAAGGAAGAAAGAGC+TGG 0.601552 3:-55557071 None:intergenic
TTGTCATCAACCTTGTATGT+GGG 0.607168 3:-55557362 None:intergenic
TCGTTTGGTCAGGACTTGCG+TGG 0.610971 3:+55556506 MsG0380014488.01.T01:CDS
GACAAGGACAACAGTGAGAG+TGG 0.610991 3:+55560023 MsG0380014488.01.T01:CDS
TTGAGATGAGACAACCTGGC+CGG 0.611994 3:+55559172 MsG0380014488.01.T01:CDS
ATTGTAGTTCCAATAAAGAG+AGG 0.615258 3:-55561212 None:intergenic
TCTCAGTGCCGACAACTGCA+AGG 0.615362 3:-55555563 None:intergenic
TTGCAGTTGTCGGCACTGAG+AGG 0.615632 3:+55555565 MsG0380014488.01.T01:CDS
GTGGATAGTATCAACGTGCA+AGG 0.618780 3:-55557084 None:intergenic
AGATGGAAGTGGAAATCTTG+AGG 0.619674 3:+55557496 MsG0380014488.01.T01:CDS
CCTCAGAAAAGTACCCAAGT+TGG 0.621041 3:+55559972 MsG0380014488.01.T01:intron
GAGAGGAATCTAAAACAGGT+AGG 0.626344 3:-55561195 None:intergenic
ATTGCCCATGACGAAAACAA+AGG 0.639287 3:-55556707 None:intergenic
TCAGGACTTGCGTGGACATG+TGG 0.639982 3:+55556514 MsG0380014488.01.T01:CDS
AATCTTCATCTTCTCCTGTG+AGG 0.640822 3:-55557130 None:intergenic
AAACTTGAGATGAGACAACC+TGG 0.645947 3:+55559168 MsG0380014488.01.T01:CDS
GAACCGCCGTCGATGCATGG+TGG 0.651144 3:+55559250 MsG0380014488.01.T01:CDS
TGAAACCATGCTGATCATGT+TGG 0.651961 3:-55562534 None:intergenic
GCTTGGCCAACTTAAAAGCA+GGG 0.652630 3:-55559140 None:intergenic
CACCACAATCAGGAAGTCAA+GGG 0.653000 3:+55556811 MsG0380014488.01.T01:CDS
TACTCAACTATGTTACAAGA+GGG 0.653382 3:+55561406 MsG0380014488.01.T01:three_prime_UTR
AATATTGTCACTCAGAGTGT+TGG 0.657585 3:+55561637 MsG0380014488.01.T01:three_prime_UTR
ATGCAAAGCGAGGAGCCAAG+AGG 0.661506 3:+55557168 MsG0380014488.01.T01:CDS
GGCTGTTGCTGAGAGACTCG+GGG 0.661927 3:-55557109 None:intergenic
AGAACAAGAGTTGATTGCCG+AGG 0.667261 3:+55559224 MsG0380014488.01.T01:CDS
ATTGTGAATGTTATAAGTTG+GGG 0.668558 3:+55562456 MsG0380014488.01.T01:three_prime_UTR
TTACCTAAAGGATTCTGCCG+GGG 0.674117 3:+55555533 MsG0380014488.01.T01:CDS
GGTAATAGTGAACTATACGA+TGG 0.677069 3:-55555515 None:intergenic
CATGTGCTATGTTATTGCAG+AGG 0.677836 3:+55555599 MsG0380014488.01.T01:CDS
GATATGTATGAAGATAGGAG+GGG 0.694967 3:+55556760 MsG0380014488.01.T01:CDS
TTGTATGTGGGATCAAACCA+AGG 0.700037 3:-55557350 None:intergenic
TCTCGACCGTTAGAAGACTG+AGG 0.700818 3:-55557212 None:intergenic
TGTCAAGATAGTGGTATCCG+AGG 0.702081 3:+55557398 MsG0380014488.01.T01:CDS
GGTGATATTGAAGATGATGG+TGG 0.703886 3:+55559993 MsG0380014488.01.T01:CDS
TGATGGTGGTAACAACGACA+AGG 0.711985 3:+55560007 MsG0380014488.01.T01:CDS
ACTCCACCATGCATCGACGG+CGG 0.726898 3:-55559253 None:intergenic
GTTGGTGATGATGCAAAGCG+AGG 0.733009 3:+55557158 MsG0380014488.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTTTTATATAATATA+TGG + Chr3:55560742-55560761 MsG0380014488.01.T01:intron 0.0%
!! AAAATAATTCTATTACAAAT+TGG - Chr3:55559643-55559662 None:intergenic 10.0%
!!! AAGTTTATTATTATTTTTGT+TGG + Chr3:55560903-55560922 MsG0380014488.01.T01:intron 10.0%
!!! AGTTTATTATTATTTTTGTT+GGG + Chr3:55560904-55560923 MsG0380014488.01.T01:intron 10.0%
!!! TTATCATTTTTATACTAAAT+TGG + Chr3:55558182-55558201 MsG0380014488.01.T01:intron 10.0%
!!! TTTGTAATAGAATTATTTTT+TGG + Chr3:55559644-55559663 MsG0380014488.01.T01:intron 10.0%
!! AATGTAAATATTAGTTACAA+GGG + Chr3:55560441-55560460 MsG0380014488.01.T01:intron 15.0%
!! ATAAGGAAAAATAAACAAAA+AGG - Chr3:55556380-55556399 None:intergenic 15.0%
!! ATGATCAAAACAATTATATA+TGG - Chr3:55555787-55555806 None:intergenic 15.0%
!! CAATGAAAATATAGAAAAAT+AGG - Chr3:55558022-55558041 None:intergenic 15.0%
!! GATTAAAAAATTGAATCAAA+AGG - Chr3:55559094-55559113 None:intergenic 15.0%
!! TAACAATATATCTAGAAAAA+TGG + Chr3:55558988-55559007 MsG0380014488.01.T01:intron 15.0%
!! TAAGGAAAAATAAACAAAAA+GGG - Chr3:55556379-55556398 None:intergenic 15.0%
!! TAATATCAGTTAATATAGTT+GGG - Chr3:55559774-55559793 None:intergenic 15.0%
!! TAATGTAAATATTAGTTACA+AGG + Chr3:55560440-55560459 MsG0380014488.01.T01:intron 15.0%
!! TATAAAACAGTAGATTATTT+AGG + Chr3:55558839-55558858 MsG0380014488.01.T01:intron 15.0%
!!! AAGTAAATTTATCAGTTTTT+TGG + Chr3:55556245-55556264 MsG0380014488.01.T01:intron 15.0%
!!! ATTTTTCTAGATATATTGTT+AGG - Chr3:55558989-55559008 None:intergenic 15.0%
!!! GTTGTTTTATTATATCTTTT+TGG - Chr3:55560873-55560892 None:intergenic 15.0%
!!! TGAATATTTTGTTTTACATT+GGG - Chr3:55559024-55559043 None:intergenic 15.0%
!!! TGTTTTGTTTTGTTTTAAAA+GGG + Chr3:55561802-55561821 MsG0380014488.01.T01:intron 15.0%
!!! TTGAATATTTTGTTTTACAT+TGG - Chr3:55559025-55559044 None:intergenic 15.0%
!!! TTGTTTTGTTTTGTTTTAAA+AGG + Chr3:55561801-55561820 MsG0380014488.01.T01:intron 15.0%
!!! TTTTTCCATTATCAATATTT+AGG + Chr3:55560827-55560846 MsG0380014488.01.T01:intron 15.0%
!!! TTTTTCTAGATATATTGTTA+GGG - Chr3:55558988-55559007 None:intergenic 15.0%
!! AAATAGAGAAAATGAGAATA+AGG - Chr3:55556397-55556416 None:intergenic 20.0%
!! AATATCAGTTAATATAGTTG+GGG - Chr3:55559773-55559792 None:intergenic 20.0%
!! AATATTCATCAAAAAGTAGA+TGG - Chr3:55556420-55556439 None:intergenic 20.0%
!! AATTGTGAATGTTATAAGTT+GGG + Chr3:55562455-55562474 MsG0380014488.01.T01:three_prime_UTR 20.0%
!! ACAAACCTAAATATTGATAA+TGG - Chr3:55560835-55560854 None:intergenic 20.0%
!! ATTATGCTGAAAATAGTTTA+TGG + Chr3:55559519-55559538 MsG0380014488.01.T01:intron 20.0%
!! CTAATATCAGTTAATATAGT+TGG - Chr3:55559775-55559794 None:intergenic 20.0%
!! TAATTTCATACAAATCAGTT+TGG + Chr3:55562043-55562062 MsG0380014488.01.T01:intron 20.0%
!! TATAAAATGATGTCAAATAG+AGG - Chr3:55555880-55555899 None:intergenic 20.0%
!! TATCAAGATAAAACCTTAAT+AGG - Chr3:55557607-55557626 None:intergenic 20.0%
!! TTAACTGAAATATTCTATGT+TGG + Chr3:55558313-55558332 MsG0380014488.01.T01:intron 20.0%
!! TTATTGTAAAAGATTCTAGT+TGG + Chr3:55561272-55561291 MsG0380014488.01.T01:three_prime_UTR 20.0%
!! TTCACATTTGCATAAATAAT+GGG + Chr3:55557577-55557596 MsG0380014488.01.T01:intron 20.0%
!! TTTCACATTTGCATAAATAA+TGG + Chr3:55557576-55557595 MsG0380014488.01.T01:intron 20.0%
!!! AATTATCTTTTTATCCAAAC+AGG - Chr3:55559387-55559406 None:intergenic 20.0%
!!! ACTTTTCTATTGTTTCTAAT+AGG + Chr3:55558393-55558412 MsG0380014488.01.T01:intron 20.0%
!!! ATTATCTTTTTATCCAAACA+GGG - Chr3:55559386-55559405 None:intergenic 20.0%
!!! ATTTATGTGCATCTTTTTTT+GGG + Chr3:55558488-55558507 MsG0380014488.01.T01:intron 20.0%
!!! CATTTTTATACTAAATTGGA+TGG + Chr3:55558186-55558205 MsG0380014488.01.T01:intron 20.0%
!!! TAGAATTATTTTTTGGTATC+AGG + Chr3:55559651-55559670 MsG0380014488.01.T01:intron 20.0%
!!! TGAGTTTTTTTTAATGGTTT+TGG + Chr3:55561928-55561947 MsG0380014488.01.T01:intron 20.0%
!!! TTTTACTTGACTTAAACTTT+GGG - Chr3:55558161-55558180 None:intergenic 20.0%
!!! TTTTCTAGATATATTGTTAG+GGG - Chr3:55558987-55559006 None:intergenic 20.0%
!!! TTTTTACTTGACTTAAACTT+TGG - Chr3:55558162-55558181 None:intergenic 20.0%
!!! TTTTTTTAATGGTTTTGGTT+AGG + Chr3:55561933-55561952 MsG0380014488.01.T01:intron 20.0%
! AAACAGCAACAATATTGATA+TGG + Chr3:55556162-55556181 MsG0380014488.01.T01:intron 25.0%
! AAATATACTATTCTTGGCAT+TGG + Chr3:55557939-55557958 MsG0380014488.01.T01:intron 25.0%
! AACATGATATCTGTATTTCA+AGG + Chr3:55558266-55558285 MsG0380014488.01.T01:intron 25.0%
! AAGAATATCTAGAGATTGTT+AGG + Chr3:55559710-55559729 MsG0380014488.01.T01:intron 25.0%
! AAGCTATCTTAGAAAGTTAT+GGG + Chr3:55559496-55559515 MsG0380014488.01.T01:intron 25.0%
! AATTATTGTTCAACCTACAA+TGG - Chr3:55556040-55556059 None:intergenic 25.0%
! AATTTACAACTTGGAAAGTT+TGG - Chr3:55557280-55557299 None:intergenic 25.0%
! ATTCTATTACAAATTGGAGA+AGG - Chr3:55559637-55559656 None:intergenic 25.0%
! ATTCTGACACATATTGTTAT+CGG - Chr3:55558938-55558957 None:intergenic 25.0%
! ATTGTGAATGTTATAAGTTG+GGG + Chr3:55562456-55562475 MsG0380014488.01.T01:three_prime_UTR 25.0%
! CAACTGAAATATACTATTCT+TGG + Chr3:55557933-55557952 MsG0380014488.01.T01:intron 25.0%
! CAATTGTGAATGTTATAAGT+TGG + Chr3:55562454-55562473 MsG0380014488.01.T01:three_prime_UTR 25.0%
! CCATTAAAAAAAACTCATCT+AGG - Chr3:55561925-55561944 None:intergenic 25.0%
! GAAAATTTGAAAAGTTGAGA+AGG - Chr3:55557998-55558017 None:intergenic 25.0%
! GATAACGAAATACACATTTA+AGG + Chr3:55558624-55558643 MsG0380014488.01.T01:intron 25.0%
! TAAGCTATCTTAGAAAGTTA+TGG + Chr3:55559495-55559514 MsG0380014488.01.T01:intron 25.0%
! TATAGTTCACTATTACCTAA+AGG + Chr3:55555521-55555540 MsG0380014488.01.T01:CDS 25.0%
! TCAAAACAAAATACCTTGAA+TGG + Chr3:55558219-55558238 MsG0380014488.01.T01:intron 25.0%
! TTATACTAAATAGCGTATTG+TGG + Chr3:55555895-55555914 MsG0380014488.01.T01:intron 25.0%
! TTGGATTTCAAATTACAGTA+TGG + Chr3:55556264-55556283 MsG0380014488.01.T01:CDS 25.0%
! TTTGATACATTCAAGACAAT+AGG + Chr3:55558602-55558621 MsG0380014488.01.T01:intron 25.0%
!! ACACATTTAAGGTAAAAAGT+TGG + Chr3:55558635-55558654 MsG0380014488.01.T01:intron 25.0%
!! GATGACAAAAGCTTTATAAT+CGG - Chr3:55560364-55560383 None:intergenic 25.0%
!! GTTTTATCTTGATAGAAGAA+CGG + Chr3:55557613-55557632 MsG0380014488.01.T01:intron 25.0%
!! TATTATATCTTTTTGGACTG+AGG - Chr3:55560866-55560885 None:intergenic 25.0%
!! TTTTAGATTCCTCTCTTTAT+TGG + Chr3:55561203-55561222 MsG0380014488.01.T01:three_prime_UTR 25.0%
!!! AATCTTGATCTCCATTTTTT+AGG + Chr3:55559110-55559129 MsG0380014488.01.T01:intron 25.0%
!!! ATTCATTTTTCAAATGTAGC+TGG + Chr3:55558906-55558925 MsG0380014488.01.T01:intron 25.0%
!!! CATTTATGTGCATCTTTTTT+TGG + Chr3:55558487-55558506 MsG0380014488.01.T01:intron 25.0%
!!! CCTAGATGAGTTTTTTTTAA+TGG + Chr3:55561922-55561941 MsG0380014488.01.T01:intron 25.0%
!!! GTTTTTTTCTTCCATTAAGT+AGG + Chr3:55560543-55560562 MsG0380014488.01.T01:intron 25.0%
!!! TATTCACTGTTTTTTCTGTA+TGG + Chr3:55557841-55557860 MsG0380014488.01.T01:intron 25.0%
!!! TCTCTTGATTTTTAGTTCAA+GGG - Chr3:55556600-55556619 None:intergenic 25.0%
!!! TTCAAAAGTTTGTTAGAAAG+AGG - Chr3:55560937-55560956 None:intergenic 25.0%
!!! TTCTCTTGATTTTTAGTTCA+AGG - Chr3:55556601-55556620 None:intergenic 25.0%
!!! TTTCATTTTTTGTCAGTACT+TGG + Chr3:55557546-55557565 MsG0380014488.01.T01:intron 25.0%
!!! TTTGTTTTGTTTTAAAAGGG+AGG + Chr3:55561805-55561824 MsG0380014488.01.T01:intron 25.0%
AAGCACTTGTGAAATTGTTT+AGG - Chr3:55559561-55559580 None:intergenic 30.0%
AATATAGTTGGGGTTATATC+AGG - Chr3:55559763-55559782 None:intergenic 30.0%
AATATCTAGAGATTGTTAGG+CGG + Chr3:55559713-55559732 MsG0380014488.01.T01:intron 30.0%
AATGCCAATTGGAGTAATAT+TGG + Chr3:55562485-55562504 MsG0380014488.01.T01:three_prime_UTR 30.0%
ACTTCAAAGAAATGATCAAG+CGG - Chr3:55558810-55558829 None:intergenic 30.0%
ACTTTAAATAAGAGAAGCCT+TGG - Chr3:55557808-55557827 None:intergenic 30.0%
AGAAAAAGGTTAAAGTAAGG+TGG + Chr3:55556785-55556804 MsG0380014488.01.T01:CDS 30.0%
AGAGTAATTGTTATGCATCA+AGG - Chr3:55559067-55559086 None:intergenic 30.0%
AGTGTAAAGTGTAGAACTAA+TGG + Chr3:55560107-55560126 MsG0380014488.01.T01:intron 30.0%
AGTTTCTCTTCAACAATATC+AGG - Chr3:55559901-55559920 None:intergenic 30.0%
ATATTGTGGTGTACTGAAAA+TGG + Chr3:55559924-55559943 MsG0380014488.01.T01:intron 30.0%
ATCTTCAATATCACCAACTT+GGG - Chr3:55559988-55560007 None:intergenic 30.0%
ATGGCGAGTAAAATATGATA+TGG + Chr3:55558956-55558975 MsG0380014488.01.T01:intron 30.0%
ATTAGGAGTAATCCAATGAT+GGG + Chr3:55557251-55557270 MsG0380014488.01.T01:CDS 30.0%
ATTCCCGAAATATCATAAAC+CGG - Chr3:55561445-55561464 None:intergenic 30.0%
ATTGTAGTTCCAATAAAGAG+AGG - Chr3:55561215-55561234 None:intergenic 30.0%
CATCTTGAACATCATCATAT+TGG - Chr3:55557475-55557494 None:intergenic 30.0%
CCTTGAATGGAAATTAAATC+TGG + Chr3:55558232-55558251 MsG0380014488.01.T01:intron 30.0%
CTATCATGCCATTAGAATTA+GGG - Chr3:55561315-55561334 None:intergenic 30.0%
GAAGAGAAACTTGTATATTG+TGG + Chr3:55559910-55559929 MsG0380014488.01.T01:intron 30.0%
GAGTAATTGTTATGCATCAA+GGG - Chr3:55559066-55559085 None:intergenic 30.0%
GATAACAATATGTGTCAGAA+TGG + Chr3:55558937-55558956 MsG0380014488.01.T01:intron 30.0%
GATGTCTGAATTGGATAATT+TGG - Chr3:55556488-55556507 None:intergenic 30.0%
GATTTCAAATTACAGTATGG+CGG + Chr3:55556267-55556286 MsG0380014488.01.T01:CDS 30.0%
GCAACATCATATGTTATGAA+TGG - Chr3:55560163-55560182 None:intergenic 30.0%
GTTGGAAAAAATGTAAGATG+TGG + Chr3:55558331-55558350 MsG0380014488.01.T01:intron 30.0%
GTTTGAATGCTATGAATTCA+TGG - Chr3:55560994-55561013 None:intergenic 30.0%
TACTAAATTGGATGGTAGAT+TGG + Chr3:55558194-55558213 MsG0380014488.01.T01:intron 30.0%
TACTCAACTATGTTACAAGA+GGG + Chr3:55561406-55561425 MsG0380014488.01.T01:three_prime_UTR 30.0%
TATTAGTTACAAGGGATATG+TGG + Chr3:55560449-55560468 MsG0380014488.01.T01:intron 30.0%
TATTGTGGTGTACTGAAAAT+GGG + Chr3:55559925-55559944 MsG0380014488.01.T01:intron 30.0%
TCATACAAATCAGTTTGGAA+CGG + Chr3:55562048-55562067 MsG0380014488.01.T01:intron 30.0%
TCCAAGTTGTAAATTATGCA+AGG + Chr3:55557285-55557304 MsG0380014488.01.T01:CDS 30.0%
TCTTCCGGTTTATGATATTT+CGG + Chr3:55561438-55561457 MsG0380014488.01.T01:three_prime_UTR 30.0%
TGGTAAAATGCAAAGAAACA+CGG - Chr3:55560291-55560310 None:intergenic 30.0%
TTACTCAACTATGTTACAAG+AGG + Chr3:55561405-55561424 MsG0380014488.01.T01:three_prime_UTR 30.0%
TTATAACACATTGACAACTG+TGG + Chr3:55559296-55559315 MsG0380014488.01.T01:intron 30.0%
TTCCAAAATCTTAACTATGC+AGG + Chr3:55561163-55561182 MsG0380014488.01.T01:intron 30.0%
TTGTTAAATAGCAGCAATTG+CGG - Chr3:55556010-55556029 None:intergenic 30.0%
! AATGTTCAAGTTTACTTTCC+TGG + Chr3:55559326-55559345 MsG0380014488.01.T01:intron 30.0%
! ATCCTGCATAGTTAAGATTT+TGG - Chr3:55561168-55561187 None:intergenic 30.0%
! ATCTTTTTGTTCGAACTGAA+TGG + Chr3:55558753-55558772 MsG0380014488.01.T01:intron 30.0%
! CCAGATTTAATTTCCATTCA+AGG - Chr3:55558235-55558254 None:intergenic 30.0%
! CTGAATTCATTGATGATTGA+TGG + Chr3:55557681-55557700 MsG0380014488.01.T01:intron 30.0%
! GAACCATTATGTTGCTTATT+TGG + Chr3:55556735-55556754 MsG0380014488.01.T01:CDS 30.0%
! GATAATTTGGAGTTACTCTT+TGG - Chr3:55556475-55556494 None:intergenic 30.0%
! GGAACTTTGGATTTTCAATA+TGG + Chr3:55561613-55561632 MsG0380014488.01.T01:three_prime_UTR 30.0%
! TAAAGAGAGGAATCTAAAAC+AGG - Chr3:55561202-55561221 None:intergenic 30.0%
! TAGTTTTCAATTGCAAACTG+CGG + Chr3:55560189-55560208 MsG0380014488.01.T01:intron 30.0%
! TTAACCAAACTGGCATTTTT+AGG - Chr3:55561511-55561530 None:intergenic 30.0%
! TTTTCAAATGTAGCTGGTAA+TGG + Chr3:55558912-55558931 MsG0380014488.01.T01:intron 30.0%
!! AATAATGGGTGTTCCTATTA+AGG + Chr3:55557591-55557610 MsG0380014488.01.T01:intron 30.0%
!!! ACATCGATAACACTAGTTTT+TGG - Chr3:55561238-55561257 None:intergenic 30.0%
!!! CAGTTTGAGCAAATCTTTTT+TGG - Chr3:55562209-55562228 None:intergenic 30.0%
!!! GGCAGTTAGTTTTATTACAA+AGG + Chr3:55561954-55561973 MsG0380014488.01.T01:intron 30.0%
!!! TGTTCAAAGTTTTGGAACTT+TGG + Chr3:55561600-55561619 MsG0380014488.01.T01:three_prime_UTR 30.0%
AAAAAGATGCAGACTCAGTT+GGG + Chr3:55559830-55559849 MsG0380014488.01.T01:CDS 35.0%
AAAGTTTGGTATCCCATCAT+TGG - Chr3:55557266-55557285 None:intergenic 35.0%
AATATTGTCACTCAGAGTGT+TGG + Chr3:55561637-55561656 MsG0380014488.01.T01:three_prime_UTR 35.0%
ACAGAATACATCTGTGCTTT+AGG + Chr3:55556985-55557004 MsG0380014488.01.T01:intron 35.0%
ACCACTATAAATGTAGGCAA+TGG + Chr3:55560965-55560984 MsG0380014488.01.T01:intron 35.0%
ACTTCCTAAAAATGCCAGTT+TGG + Chr3:55561504-55561523 MsG0380014488.01.T01:three_prime_UTR 35.0%
AGGATATGTATGAAGATAGG+AGG + Chr3:55556758-55556777 MsG0380014488.01.T01:CDS 35.0%
AGTTGTAAATTATGCAAGGC+CGG + Chr3:55557289-55557308 MsG0380014488.01.T01:CDS 35.0%
ATATGTATGAAGATAGGAGG+GGG + Chr3:55556761-55556780 MsG0380014488.01.T01:CDS 35.0%
ATCAACTCTTGTTCTTCAAG+AGG - Chr3:55559219-55559238 None:intergenic 35.0%
ATGTATTCTGTCTGTTGAAG+AGG - Chr3:55556976-55556995 None:intergenic 35.0%
ATTGACATCTCATGCTTTGA+CGG + Chr3:55561570-55561589 MsG0380014488.01.T01:three_prime_UTR 35.0%
ATTGTGGTGTACTGAAAATG+GGG + Chr3:55559926-55559945 MsG0380014488.01.T01:intron 35.0%
ATTTCGGGAATGTATCTAGA+TGG + Chr3:55561454-55561473 MsG0380014488.01.T01:three_prime_UTR 35.0%
CAACATCCAATTCAATGCAT+TGG - Chr3:55561776-55561795 None:intergenic 35.0%
CAGTGTTAGAGATCTTTGAA+TGG + Chr3:55560254-55560273 MsG0380014488.01.T01:intron 35.0%
CATCTTCAATATCACCAACT+TGG - Chr3:55559989-55560008 None:intergenic 35.0%
CCACTATAAATGTAGGCAAT+GGG + Chr3:55560966-55560985 MsG0380014488.01.T01:intron 35.0%
CCTAATTCTAATGGCATGAT+AGG + Chr3:55561313-55561332 MsG0380014488.01.T01:three_prime_UTR 35.0%
CCTATCATGCCATTAGAATT+AGG - Chr3:55561316-55561335 None:intergenic 35.0%
CCTCCAAATAAGCAACATAA+TGG - Chr3:55556741-55556760 None:intergenic 35.0%
CTTCCGGTTTATGATATTTC+GGG + Chr3:55561439-55561458 MsG0380014488.01.T01:three_prime_UTR 35.0%
GAAGATGAAGATTTGGATGT+TGG + Chr3:55557140-55557159 MsG0380014488.01.T01:CDS 35.0%
GAAGCATGATCATATTTGCA+AGG + Chr3:55561476-55561495 MsG0380014488.01.T01:three_prime_UTR 35.0%
GATATGTATGAAGATAGGAG+GGG + Chr3:55556760-55556779 MsG0380014488.01.T01:CDS 35.0%
GATGATGTTCAAGATGAAGA+TGG + Chr3:55557479-55557498 MsG0380014488.01.T01:CDS 35.0%
GATTAGGAGTAATCCAATGA+TGG + Chr3:55557250-55557269 MsG0380014488.01.T01:CDS 35.0%
GCAAATGACAGTACATAAGA+AGG + Chr3:55559683-55559702 MsG0380014488.01.T01:intron 35.0%
GCCATAAACCCTAATTCTAA+TGG + Chr3:55561304-55561323 MsG0380014488.01.T01:three_prime_UTR 35.0%
GCCATTAGAATTAGGGTTTA+TGG - Chr3:55561308-55561327 None:intergenic 35.0%
GCCTTGCATAATTTACAACT+TGG - Chr3:55557289-55557308 None:intergenic 35.0%
GGAGAAGGATGACAAAATTT+AGG - Chr3:55559622-55559641 None:intergenic 35.0%
GGATATGTATGAAGATAGGA+GGG + Chr3:55556759-55556778 MsG0380014488.01.T01:CDS 35.0%
GGCAGAAAAAGGTTAAAGTA+AGG + Chr3:55556782-55556801 MsG0380014488.01.T01:CDS 35.0%
GGTAATAGTGAACTATACGA+TGG - Chr3:55555518-55555537 None:intergenic 35.0%
GTCAAACCAATGCATTGAAT+TGG + Chr3:55561767-55561786 MsG0380014488.01.T01:intron 35.0%
GTTCTTGGAAATTTGTGGAA+TGG + Chr3:55555623-55555642 MsG0380014488.01.T01:CDS 35.0%
GTTGAAGAGGAGGAAAAATA+AGG - Chr3:55556963-55556982 None:intergenic 35.0%
TAACAACACTTGACCATTGT+AGG + Chr3:55556024-55556043 MsG0380014488.01.T01:intron 35.0%
TAACGTGAATTTAGACATGC+TGG + Chr3:55557889-55557908 MsG0380014488.01.T01:intron 35.0%
TAATGAGAATAGCGATGCAA+AGG + Chr3:55560064-55560083 MsG0380014488.01.T01:CDS 35.0%
TATCCAATTCAGACATCGTT+TGG + Chr3:55556491-55556510 MsG0380014488.01.T01:CDS 35.0%
TATTACCTAAAGGATTCTGC+CGG + Chr3:55555531-55555550 MsG0380014488.01.T01:CDS 35.0%
TATTAGAGACCAAGAATCAG+TGG - Chr3:55558702-55558721 None:intergenic 35.0%
TCAACACTGTACATCTATGA+AGG - Chr3:55560504-55560523 None:intergenic 35.0%
TCATGTAGTTTAACTGTGCT+TGG + Chr3:55558778-55558797 MsG0380014488.01.T01:intron 35.0%
TGGAGGATATGTATGAAGAT+AGG + Chr3:55556755-55556774 MsG0380014488.01.T01:CDS 35.0%
TGTCTCATCTCAAGTTTATC+AGG - Chr3:55559165-55559184 None:intergenic 35.0%
TTAACACTCTGTCTCTCTAA+AGG + Chr3:55562425-55562444 MsG0380014488.01.T01:intron 35.0%
TTCTACCACAACCTACTTAA+TGG - Chr3:55560557-55560576 None:intergenic 35.0%
TTCTTCCATTAAGTAGGTTG+TGG + Chr3:55560549-55560568 MsG0380014488.01.T01:intron 35.0%
TTGTCATCAACCTTGTATGT+GGG - Chr3:55557365-55557384 None:intergenic 35.0%
! AAAAGGTTGATTGTCAACCT+TGG + Chr3:55557333-55557352 MsG0380014488.01.T01:CDS 35.0%
! AAGATTCTAGTTGGATTGCT+TGG + Chr3:55561281-55561300 MsG0380014488.01.T01:three_prime_UTR 35.0%
! AGATTCTAGTTGGATTGCTT+GGG + Chr3:55561282-55561301 MsG0380014488.01.T01:three_prime_UTR 35.0%
! ATAGGATCACAAGCTCTAAT+CGG + Chr3:55561331-55561350 MsG0380014488.01.T01:three_prime_UTR 35.0%
! CCATTATGTTGCTTATTTGG+AGG + Chr3:55556738-55556757 MsG0380014488.01.T01:CDS 35.0%
! CTGTGCTTTAGGCAATTAAA+AGG + Chr3:55556996-55557015 MsG0380014488.01.T01:intron 35.0%
! GAGATTGCTTTCTCTGAAAA+AGG + Chr3:55557316-55557335 MsG0380014488.01.T01:CDS 35.0%
! GGAGCAAATGTTCAAAGTTT+TGG + Chr3:55561592-55561611 MsG0380014488.01.T01:three_prime_UTR 35.0%
! TATACTATTCTTGGCATTGG+CGG + Chr3:55557942-55557961 MsG0380014488.01.T01:intron 35.0%
! TATCCAAACAGGGCATTATA+GGG - Chr3:55559376-55559395 None:intergenic 35.0%
! TCTGCATCTTTTTCCAAAGA+TGG - Chr3:55559823-55559842 None:intergenic 35.0%
! TGCATTTTACCACAATACGA+AGG + Chr3:55560299-55560318 MsG0380014488.01.T01:intron 35.0%
! TTATCCAAACAGGGCATTAT+AGG - Chr3:55559377-55559396 None:intergenic 35.0%
!! AAATCAGTTTGGAACGGTTT+TGG + Chr3:55562054-55562073 MsG0380014488.01.T01:intron 35.0%
!! AAGAGTGTCTCATACATTCA+TGG - Chr3:55558436-55558455 None:intergenic 35.0%
!! GTTGGTGATATTGAAGATGA+TGG + Chr3:55559990-55560009 MsG0380014488.01.T01:CDS 35.0%
!!! ATCCTGCTTTTTGCAGAAAT+GGG + Chr3:55556554-55556573 MsG0380014488.01.T01:CDS 35.0%
!!! CAATCCTTTGTTTTCGTCAT+GGG + Chr3:55556703-55556722 MsG0380014488.01.T01:CDS 35.0%
!!! TATCCTGCTTTTTGCAGAAA+TGG + Chr3:55556553-55556572 MsG0380014488.01.T01:CDS 35.0%
!!! TCAATCCTTTGTTTTCGTCA+TGG + Chr3:55556702-55556721 MsG0380014488.01.T01:CDS 35.0%
!!! TGATCTCCATTTTTTAGGAG+TGG + Chr3:55559115-55559134 MsG0380014488.01.T01:intron 35.0%
AAACTTGAGATGAGACAACC+TGG + Chr3:55559168-55559187 MsG0380014488.01.T01:CDS 40.0%
AACTCTTGTTCTTCAAGAGG+TGG - Chr3:55559216-55559235 None:intergenic 40.0%
AATCTTCATCTTCTCCTGTG+AGG - Chr3:55557133-55557152 None:intergenic 40.0%
AATTCAGACATCGTTTGGTC+AGG + Chr3:55556496-55556515 MsG0380014488.01.T01:CDS 40.0%
AGAGAAAGCAATCTCCTATC+CGG - Chr3:55557311-55557330 None:intergenic 40.0%
AGATGGAAGTGGAAATCTTG+AGG + Chr3:55557496-55557515 MsG0380014488.01.T01:CDS 40.0%
AGGAGACAGTCAATGCAATA+TGG - Chr3:55558075-55558094 None:intergenic 40.0%
AGGGAAAAAAGTTTGTGTCG+TGG - Chr3:55557747-55557766 None:intergenic 40.0%
AGGGATCCACTCCTAAAAAA+TGG - Chr3:55559124-55559143 None:intergenic 40.0%
AGTCAATGCAATATGGTCCA+AGG - Chr3:55558068-55558087 None:intergenic 40.0%
ATAGCGATGCAAAGGTGATT+CGG + Chr3:55560072-55560091 MsG0380014488.01.T01:CDS 40.0%
ATCCCATTTCTGCAAAAAGC+AGG - Chr3:55556559-55556578 None:intergenic 40.0%
ATCGGTCATCGAAACTTTGA+TGG + Chr3:55561349-55561368 MsG0380014488.01.T01:three_prime_UTR 40.0%
ATTACCTAAAGGATTCTGCC+GGG + Chr3:55555532-55555551 MsG0380014488.01.T01:CDS 40.0%
ATTGCCCATGACGAAAACAA+AGG - Chr3:55556710-55556729 None:intergenic 40.0%
CAAAGAAGTTAGTGCACGAA+TGG + Chr3:55556337-55556356 MsG0380014488.01.T01:CDS 40.0%
CAAATGGAGATCTAGAAGAG+AGG + Chr3:55555661-55555680 MsG0380014488.01.T01:intron 40.0%
CACAGGAGAAGATGAAGATT+TGG + Chr3:55557133-55557152 MsG0380014488.01.T01:CDS 40.0%
CAGAAATGGGATCCAAATTG+GGG + Chr3:55556567-55556586 MsG0380014488.01.T01:CDS 40.0%
CAGTTGTTGTACTTGTTCCA+AGG + Chr3:55557788-55557807 MsG0380014488.01.T01:intron 40.0%
CATCTCAAGTTTATCAGGCT+TGG - Chr3:55559160-55559179 None:intergenic 40.0%
CATGTGCTATGTTATTGCAG+AGG + Chr3:55555599-55555618 MsG0380014488.01.T01:CDS 40.0%
CCAGTTTGGTTAATCATGCA+TGG + Chr3:55561518-55561537 MsG0380014488.01.T01:three_prime_UTR 40.0%
CCATGCATGATTAACCAAAC+TGG - Chr3:55561521-55561540 None:intergenic 40.0%
CCCATTGCCTACATTTATAG+TGG - Chr3:55560969-55560988 None:intergenic 40.0%
CGAGCCAATATTACTCCAAT+TGG - Chr3:55562492-55562511 None:intergenic 40.0%
CGTGTGACCACTATAAATGT+AGG + Chr3:55560959-55560978 MsG0380014488.01.T01:intron 40.0%
CTAGCTCATAAGATCGCAAA+TGG + Chr3:55556308-55556327 MsG0380014488.01.T01:CDS 40.0%
CTGAAATCGCTGTATAAGAC+AGG - Chr3:55558865-55558884 None:intergenic 40.0%
CTTGTCATCAACCTTGTATG+TGG - Chr3:55557366-55557385 None:intergenic 40.0%
GAAAAAGATGCAGACTCAGT+TGG + Chr3:55559829-55559848 MsG0380014488.01.T01:CDS 40.0%
GAATCATTCCTTGCAGTTGT+CGG + Chr3:55555555-55555574 MsG0380014488.01.T01:CDS 40.0%
GAATTCCACCTGGTTTCAAA+TGG + Chr3:55555645-55555664 MsG0380014488.01.T01:intron 40.0%
GAGGAGTTCTTGGAAATTTG+TGG + Chr3:55555618-55555637 MsG0380014488.01.T01:CDS 40.0%
GCAGAAATGGGATCCAAATT+GGG + Chr3:55556566-55556585 MsG0380014488.01.T01:CDS 40.0%
GGTTTATTAGACTTCTCAGC+AGG - Chr3:55559880-55559899 None:intergenic 40.0%
GTACAATTGTACAGGTAGCT+CGG + Chr3:55557435-55557454 MsG0380014488.01.T01:CDS 40.0%
GTATGAGTTGCATGGTATTG+AGG - Chr3:55561139-55561158 None:intergenic 40.0%
GTCCTTCAAATCTCTTCAAG+TGG - Chr3:55562515-55562534 None:intergenic 40.0%
GTGACAATTAACAGCTTACC+AGG - Chr3:55559347-55559366 None:intergenic 40.0%
GTTAATCATGCATGGCAAGA+AGG + Chr3:55561526-55561545 MsG0380014488.01.T01:three_prime_UTR 40.0%
GTTCAAGATGAAGATGGAAG+TGG + Chr3:55557485-55557504 MsG0380014488.01.T01:CDS 40.0%
GTTCAGGTGTACAATTGTAC+AGG + Chr3:55557427-55557446 MsG0380014488.01.T01:CDS 40.0%
TAAATTATGCAAGGCCGGAT+AGG + Chr3:55557294-55557313 MsG0380014488.01.T01:CDS 40.0%
TATTCTGTCTGTTGAAGAGG+AGG - Chr3:55556973-55556992 None:intergenic 40.0%
TCTGAGGAGGTTTATCATCT+TGG - Chr3:55559959-55559978 None:intergenic 40.0%
TGAATTGCTACCACATGACT+AGG - Chr3:55557770-55557789 None:intergenic 40.0%
TGACCAAACGATGTCTGAAT+TGG - Chr3:55556497-55556516 None:intergenic 40.0%
TGATGTGATGAAACTTCTCG+TGG - Chr3:55556862-55556881 None:intergenic 40.0%
TGCAGAAATGGGATCCAAAT+TGG + Chr3:55556565-55556584 MsG0380014488.01.T01:CDS 40.0%
TGTTATTGCAGAGGAGTTCT+TGG + Chr3:55555608-55555627 MsG0380014488.01.T01:CDS 40.0%
TTGACATCTCATGCTTTGAC+GGG + Chr3:55561571-55561590 MsG0380014488.01.T01:three_prime_UTR 40.0%
TTGTATGTGGGATCAAACCA+AGG - Chr3:55557353-55557372 None:intergenic 40.0%
TTTCCCTATAATGCCCTGTT+TGG + Chr3:55559370-55559389 MsG0380014488.01.T01:intron 40.0%
! AAATTTTGAACCCCCACTCA+GGG + Chr3:55558665-55558684 MsG0380014488.01.T01:intron 40.0%
! AAGCTTTATAATCGGCACCA+AGG - Chr3:55560356-55560375 None:intergenic 40.0%
! AAGGGGTTAGGAAGTTGATT+AGG + Chr3:55557234-55557253 MsG0380014488.01.T01:CDS 40.0%
! ACGATCTGTGTTTTGTGGAA+TGG + Chr3:55555463-55555482 MsG0380014488.01.T01:CDS 40.0%
! ACGCAGTTTGCTTAAGTCAA+AGG - Chr3:55557036-55557055 None:intergenic 40.0%
! ATCTTTTTGGACTGAGGAAG+AGG - Chr3:55560860-55560879 None:intergenic 40.0%
! CGCAGTTTGCTTAAGTCAAA+GGG - Chr3:55557035-55557054 None:intergenic 40.0%
! CTAGATCTCCATTTGAAACC+AGG - Chr3:55555656-55555675 None:intergenic 40.0%
! GAGAGGAATCTAAAACAGGT+AGG - Chr3:55561198-55561217 None:intergenic 40.0%
! GATAGACGATCTGTGTTTTG+TGG + Chr3:55555458-55555477 MsG0380014488.01.T01:CDS 40.0%
! GCGAGAAGGAAAAGAAGTTT+TGG - Chr3:55561087-55561106 None:intergenic 40.0%
! GGAAAAGTGTATGAGTTGCA+TGG - Chr3:55561147-55561166 None:intergenic 40.0%
! GGTCCAAGGCTTAATTTTGA+GGG - Chr3:55558054-55558073 None:intergenic 40.0%
! GGTGATATTGAAGATGATGG+TGG + Chr3:55559993-55560012 MsG0380014488.01.T01:CDS 40.0%
! GTCCAAGGCTTAATTTTGAG+GGG - Chr3:55558053-55558072 None:intergenic 40.0%
! GTTGATGAACGATGTGAAGA+GGG - Chr3:55561109-55561128 None:intergenic 40.0%
! TGCATGGTATTGAGGTTGTA+AGG - Chr3:55561131-55561150 None:intergenic 40.0%
! TGGTCCAAGGCTTAATTTTG+AGG - Chr3:55558055-55558074 None:intergenic 40.0%
! TTGGTTTGATCCCACATACA+AGG + Chr3:55557352-55557371 MsG0380014488.01.T01:CDS 40.0%
! TTTGACTTAAGCAAACTGCG+TGG + Chr3:55557035-55557054 MsG0380014488.01.T01:intron 40.0%
!! AAGAGGAGTAGAAGTGCTAA+GGG + Chr3:55557185-55557204 MsG0380014488.01.T01:CDS 40.0%
!! AGAGGGTAACATTAGTCTTC+CGG + Chr3:55561423-55561442 MsG0380014488.01.T01:three_prime_UTR 40.0%
!! CAAGGTTGATGACAAGATAG+AGG + Chr3:55557370-55557389 MsG0380014488.01.T01:CDS 40.0%
!! CATTTTGTTTCACAAGAGCG+TGG + Chr3:55555492-55555511 MsG0380014488.01.T01:CDS 40.0%
!! GAAGGATTGGTTTCTAGTGA+TGG + Chr3:55561544-55561563 MsG0380014488.01.T01:three_prime_UTR 40.0%
!! TCCAAGGCTTAATTTTGAGG+GGG - Chr3:55558052-55558071 None:intergenic 40.0%
!! TTTGTTTTCGTCATGGGCAA+TGG + Chr3:55556709-55556728 MsG0380014488.01.T01:CDS 40.0%
!!! TTTTTTCCCTCCTAGTCATG+TGG + Chr3:55557757-55557776 MsG0380014488.01.T01:intron 40.0%
AACTGCAAGGAATGATTCCC+CGG - Chr3:55555553-55555572 None:intergenic 45.0%
AAGGGCTTCTTACCCCAATT+TGG - Chr3:55556582-55556601 None:intergenic 45.0%
AAGGTGGTTTCACCACAATC+AGG + Chr3:55556801-55556820 MsG0380014488.01.T01:CDS 45.0%
ACCCCCTCAAAATTAAGCCT+TGG + Chr3:55558048-55558067 MsG0380014488.01.T01:intron 45.0%
ACGCATGCATACTCTTTCTC+AGG + Chr3:55556444-55556463 MsG0380014488.01.T01:intron 45.0%
AGAAGTTAGTGCACGAATGG+TGG + Chr3:55556340-55556359 MsG0380014488.01.T01:CDS 45.0%
AGTCTTCTAACGGTCGAGAA+GGG + Chr3:55557216-55557235 MsG0380014488.01.T01:CDS 45.0%
ATCAGTGCAGAGTGTGTTGA+TGG + Chr3:55556894-55556913 MsG0380014488.01.T01:intron 45.0%
ATGGAGATCTAGAAGAGAGG+TGG + Chr3:55555664-55555683 MsG0380014488.01.T01:intron 45.0%
ATTGCTACCACATGACTAGG+AGG - Chr3:55557767-55557786 None:intergenic 45.0%
CACCACAATCAGGAAGTCAA+GGG + Chr3:55556811-55556830 MsG0380014488.01.T01:CDS 45.0%
CCAAAGATGGAGACAAAGTG+AGG - Chr3:55559810-55559829 None:intergenic 45.0%
CCTCACTTTGTCTCCATCTT+TGG + Chr3:55559807-55559826 MsG0380014488.01.T01:CDS 45.0%
CCTCTCTCACTAGGAAAAGT+TGG + Chr3:55558092-55558111 MsG0380014488.01.T01:intron 45.0%
CGCCACTTGAAGAGATTTGA+AGG + Chr3:55562510-55562529 MsG0380014488.01.T01:three_prime_UTR 45.0%
CGTGGATGAGTATTTCGTAC+TGG - Chr3:55556844-55556863 None:intergenic 45.0%
CTAGAAGAGAGGTGGTTGAT+TGG + Chr3:55555672-55555691 MsG0380014488.01.T01:intron 45.0%
CTTAGCACTTCTACTCCTCT+TGG - Chr3:55557186-55557205 None:intergenic 45.0%
GCACTTAGTGGGATAAGACT+TGG + Chr3:55555954-55555973 MsG0380014488.01.T01:intron 45.0%
GCGGCACTTGGGTTAATATA+AGG + Chr3:55559732-55559751 MsG0380014488.01.T01:intron 45.0%
GCTAGTGCCAAATTATGAGC+AGG - Chr3:55556293-55556312 None:intergenic 45.0%
GCTTGGCCAACTTAAAAGCA+GGG - Chr3:55559143-55559162 None:intergenic 45.0%
GGCACCAAGGTTTCAAATTG+CGG - Chr3:55560343-55560362 None:intergenic 45.0%
GGTTCTCCTCAGTCTTCTAA+CGG + Chr3:55557206-55557225 MsG0380014488.01.T01:CDS 45.0%
GTGGATAGTATCAACGTGCA+AGG - Chr3:55557087-55557106 None:intergenic 45.0%
TCACCACAATCAGGAAGTCA+AGG + Chr3:55556810-55556829 MsG0380014488.01.T01:CDS 45.0%
TCATGCATGGCAAGAAGGAT+TGG + Chr3:55561531-55561550 MsG0380014488.01.T01:three_prime_UTR 45.0%
TGCTGAGAACCTTCGTATTG+TGG - Chr3:55560311-55560330 None:intergenic 45.0%
TGGGGAACACTAATGCCAAT+TGG + Chr3:55562474-55562493 MsG0380014488.01.T01:three_prime_UTR 45.0%
TTACCTAAAGGATTCTGCCG+GGG + Chr3:55555533-55555552 MsG0380014488.01.T01:CDS 45.0%
TTGCTACCACATGACTAGGA+GGG - Chr3:55557766-55557785 None:intergenic 45.0%
TTGTGGAATGGAATTCCACC+TGG + Chr3:55555635-55555654 MsG0380014488.01.T01:CDS 45.0%
! AGAACAAGAGTTGATTGCCG+AGG + Chr3:55559224-55559243 MsG0380014488.01.T01:CDS 45.0%
! CCAACTTGGGTACTTTTCTG+AGG - Chr3:55559975-55559994 None:intergenic 45.0%
! CCAACTTTTCCTAGTGAGAG+AGG - Chr3:55558095-55558114 None:intergenic 45.0%
! GAAATTTTGAACCCCCACTC+AGG + Chr3:55558664-55558683 MsG0380014488.01.T01:intron 45.0%
! GAGGTACTCTGTCAAGATAG+TGG + Chr3:55557389-55557408 MsG0380014488.01.T01:CDS 45.0%
! GATCTCCATTTGAAACCAGG+TGG - Chr3:55555653-55555672 None:intergenic 45.0%
! GCAACCGCAATTTGAAACCT+TGG + Chr3:55560336-55560355 MsG0380014488.01.T01:intron 45.0%
! TGTCAAGATAGTGGTATCCG+AGG + Chr3:55557398-55557417 MsG0380014488.01.T01:CDS 45.0%
!! ACTTGGGTACTTTTCTGAGG+AGG - Chr3:55559972-55559991 None:intergenic 45.0%
!! ATTGTCACTCAGAGTGTTGG+TGG + Chr3:55561640-55561659 MsG0380014488.01.T01:three_prime_UTR 45.0%
!! CAAGAGGAGTAGAAGTGCTA+AGG + Chr3:55557184-55557203 MsG0380014488.01.T01:CDS 45.0%
!! CCTCAGAAAAGTACCCAAGT+TGG + Chr3:55559972-55559991 MsG0380014488.01.T01:intron 45.0%
!! GGTTGATGAACGATGTGAAG+AGG - Chr3:55561110-55561129 None:intergenic 45.0%
!! GTGGATCCCTGCTTTTAAGT+TGG + Chr3:55559134-55559153 MsG0380014488.01.T01:CDS 45.0%
!! TGATGGTGGTAACAACGACA+AGG + Chr3:55560007-55560026 MsG0380014488.01.T01:CDS 45.0%
!! AAAAAATATAAAAAACAAAT+AGG - Chr3:55561708-55561727 None:intergenic 5.0%
!! AAATAAATAAATAAAAATGT+TGG - Chr3:55562353-55562372 None:intergenic 5.0%
!! ATAAAAAATAATACTAATTA+TGG - Chr3:55560734-55560753 None:intergenic 5.0%
!! ATTTGTAAAATAATAATATA+AGG + Chr3:55556057-55556076 MsG0380014488.01.T01:intron 5.0%
!! TATTTATTATTATTATTGTT+AGG + Chr3:55562372-55562391 MsG0380014488.01.T01:intron 5.0%
!!! ATTTTATATTTGAATTTTTT+TGG + Chr3:55562093-55562112 MsG0380014488.01.T01:intron 5.0%
!!! TTTTATATTTGAATTTTTTT+GGG + Chr3:55562094-55562113 MsG0380014488.01.T01:intron 5.0%
ACGTGCAAGGAAGAAAGAGC+TGG - Chr3:55557074-55557093 None:intergenic 50.0%
AGAGATTGTTAGGCGGCACT+TGG + Chr3:55559720-55559739 MsG0380014488.01.T01:intron 50.0%
AGATAGGAGGGGGCAGAAAA+AGG + Chr3:55556771-55556790 MsG0380014488.01.T01:CDS 50.0%
ATCACTCCACCATGCATCGA+CGG - Chr3:55559259-55559278 None:intergenic 50.0%
ATGGCGGCCTGCTCATAATT+TGG + Chr3:55556283-55556302 MsG0380014488.01.T01:CDS 50.0%
ATTCCCCGGCAGAATCCTTT+AGG - Chr3:55555539-55555558 None:intergenic 50.0%
CACCCTTGACTTCCTGATTG+TGG - Chr3:55556816-55556835 None:intergenic 50.0%
CAGTCTTCTAACGGTCGAGA+AGG + Chr3:55557215-55557234 MsG0380014488.01.T01:CDS 50.0%
GACAAGGACAACAGTGAGAG+TGG + Chr3:55560023-55560042 MsG0380014488.01.T01:CDS 50.0%
GAGATTGTTAGGCGGCACTT+GGG + Chr3:55559721-55559740 MsG0380014488.01.T01:intron 50.0%
GCAGCAATACTGATGCGTAG+CGG - Chr3:55555852-55555871 None:intergenic 50.0%
GCGACGCTATAGCACTTAGT+GGG + Chr3:55555943-55555962 MsG0380014488.01.T01:intron 50.0%
GGCTTGGCCAACTTAAAAGC+AGG - Chr3:55559144-55559163 None:intergenic 50.0%
GTCTTCTAACGGTCGAGAAG+GGG + Chr3:55557217-55557236 MsG0380014488.01.T01:CDS 50.0%
GTGTTCCCGAGTTAAGACTG+CGG - Chr3:55556925-55556944 None:intergenic 50.0%
TCTCGACCGTTAGAAGACTG+AGG - Chr3:55557215-55557234 None:intergenic 50.0%
TGACTGTCTCCTCTCTCACT+AGG + Chr3:55558083-55558102 MsG0380014488.01.T01:intron 50.0%
TGCGACGCTATAGCACTTAG+TGG + Chr3:55555942-55555961 MsG0380014488.01.T01:intron 50.0%
TGTTCTTCAAGAGGTGGAGC+TGG - Chr3:55559210-55559229 None:intergenic 50.0%
TTGAGATGAGACAACCTGGC+CGG + Chr3:55559172-55559191 MsG0380014488.01.T01:CDS 50.0%
! CAAGAGTTGATTGCCGAGGT+TGG + Chr3:55559228-55559247 MsG0380014488.01.T01:CDS 50.0%
! TCGATGCATGGTGGAGTGAT+GGG + Chr3:55559259-55559278 MsG0380014488.01.T01:CDS 50.0%
!! GTTGGTGATGATGCAAAGCG+AGG + Chr3:55557158-55557177 MsG0380014488.01.T01:CDS 50.0%
!! TGCACGAATGGTGGATGACA+AGG + Chr3:55556349-55556368 MsG0380014488.01.T01:CDS 50.0%
!! TTGGCAACGCCACTGATTCT+TGG + Chr3:55558690-55558709 MsG0380014488.01.T01:intron 50.0%
ACCTGCCGCAGTCTTAACTC+GGG + Chr3:55556917-55556936 MsG0380014488.01.T01:intron 55.0%
ACGATGTGAAGAGGGCGAGA+AGG - Chr3:55561101-55561120 None:intergenic 55.0%
AGGCTGTTGCTGAGAGACTC+GGG - Chr3:55557113-55557132 None:intergenic 55.0%
ATAGTGGTATCCGAGGCTGC+TGG + Chr3:55557405-55557424 MsG0380014488.01.T01:CDS 55.0%
ATGCAAAGCGAGGAGCCAAG+AGG + Chr3:55557168-55557187 MsG0380014488.01.T01:CDS 55.0%
CTAACGGTCGAGAAGGGGTT+AGG + Chr3:55557222-55557241 MsG0380014488.01.T01:CDS 55.0%
GACCTGCCGCAGTCTTAACT+CGG + Chr3:55556916-55556935 MsG0380014488.01.T01:intron 55.0%
GAGGCTGTTGCTGAGAGACT+CGG - Chr3:55557114-55557133 None:intergenic 55.0%
TACACCTGAACCAGCAGCCT+CGG - Chr3:55557418-55557437 None:intergenic 55.0%
TCAGGACTTGCGTGGACATG+TGG + Chr3:55556514-55556533 MsG0380014488.01.T01:CDS 55.0%
TCGTTTGGTCAGGACTTGCG+TGG + Chr3:55556506-55556525 MsG0380014488.01.T01:CDS 55.0%
TCTCTCAGCAACAGCCTCAC+AGG + Chr3:55557116-55557135 MsG0380014488.01.T01:CDS 55.0%
TTGAACCCCTGGCCACTATG+TGG - Chr3:55557970-55557989 None:intergenic 55.0%
! AGAAGGTGCAGTTGAACCCC+TGG - Chr3:55557981-55558000 None:intergenic 55.0%
! ATGCATGGTGGAGTGATGGG+TGG + Chr3:55559262-55559281 MsG0380014488.01.T01:intron 55.0%
! GTCGATGCATGGTGGAGTGA+TGG + Chr3:55559258-55559277 MsG0380014488.01.T01:CDS 55.0%
! TTGCAGTTGTCGGCACTGAG+AGG + Chr3:55555565-55555584 MsG0380014488.01.T01:CDS 55.0%
!! ATGGTGGAGTGATGGGTGGT+GGG + Chr3:55559266-55559285 MsG0380014488.01.T01:intron 55.0%
!! TCTCAGTGCCGACAACTGCA+AGG - Chr3:55555566-55555585 None:intergenic 55.0%
ATCGACGGCGGTTCCAACCT+CGG - Chr3:55559244-55559263 None:intergenic 60.0%
CGTTGCCAAGACCCTGAGTG+GGG - Chr3:55558679-55558698 None:intergenic 60.0%
GCGTTGCCAAGACCCTGAGT+GGG - Chr3:55558680-55558699 None:intergenic 60.0%
GGCTGTTGCTGAGAGACTCG+GGG - Chr3:55557112-55557131 None:intergenic 60.0%
GTTGCCAAGACCCTGAGTGG+GGG - Chr3:55558678-55558697 None:intergenic 60.0%
TCCCGAGTTAAGACTGCGGC+AGG - Chr3:55556921-55556940 None:intergenic 60.0%
TGAACCCCCACTCAGGGTCT+TGG + Chr3:55558671-55558690 MsG0380014488.01.T01:intron 60.0%
TGCTGAGAGACTCGGGGTTG+TGG - Chr3:55557106-55557125 None:intergenic 60.0%
TTGGAACCGCCGTCGATGCA+TGG + Chr3:55559247-55559266 MsG0380014488.01.T01:CDS 60.0%
! AAGAGGTGGAGCTGGCCTGA+TGG - Chr3:55559202-55559221 None:intergenic 60.0%
! ACTCCACCATGCATCGACGG+CGG - Chr3:55559256-55559275 None:intergenic 60.0%
! GCATTGGCGGAGCCACATAG+TGG + Chr3:55557955-55557974 MsG0380014488.01.T01:intron 60.0%
!! CATGGTGGAGTGATGGGTGG+TGG + Chr3:55559265-55559284 MsG0380014488.01.T01:intron 60.0%
!! GTATCCGAGGCTGCTGGTTC+AGG + Chr3:55557411-55557430 MsG0380014488.01.T01:CDS 60.0%
!! TGGAGTGATGGGTGGTGGGA+GGG + Chr3:55559270-55559289 MsG0380014488.01.T01:intron 60.0%
AACCTGGCCGGTCGACCATC+AGG + Chr3:55559184-55559203 MsG0380014488.01.T01:CDS 65.0%
CGGAGCCACATAGTGGCCAG+GGG + Chr3:55557962-55557981 MsG0380014488.01.T01:intron 65.0%
GAACCGCCGTCGATGCATGG+TGG + Chr3:55559250-55559269 MsG0380014488.01.T01:CDS 65.0%
GCGGAGCCACATAGTGGCCA+GGG + Chr3:55557961-55557980 MsG0380014488.01.T01:intron 65.0%
GGCGTTGCCAAGACCCTGAG+TGG - Chr3:55558681-55558700 None:intergenic 65.0%
! GAGCTGGCCTGATGGTCGAC+CGG - Chr3:55559194-55559213 None:intergenic 65.0%
!! GAGTGATGGGTGGTGGGAGG+GGG + Chr3:55559272-55559291 MsG0380014488.01.T01:intron 65.0%
!! GGAGTGATGGGTGGTGGGAG+GGG + Chr3:55559271-55559290 MsG0380014488.01.T01:intron 65.0%
!! GTGGAGTGATGGGTGGTGGG+AGG + Chr3:55559269-55559288 MsG0380014488.01.T01:intron 65.0%
GGCGGAGCCACATAGTGGCC+AGG + Chr3:55557960-55557979 MsG0380014488.01.T01:intron 70.0%
GGCCTGATGGTCGACCGGCC+AGG - Chr3:55559189-55559208 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 55555453 55562542 55555453 ID=MsG0380014488.01;Name=MsG0380014488.01
Chr3 mRNA 55555453 55562542 55555453 ID=MsG0380014488.01.T01;Parent=MsG0380014488.01;Name=MsG0380014488.01.T01;_AED=0.34;_eAED=0.54;_QI=0|0.33|0.1|1|0.77|0.6|10|603|481
Chr3 exon 55555453 55555656 55555453 ID=MsG0380014488.01.T01:exon:28759;Parent=MsG0380014488.01.T01
Chr3 exon 55556260 55556370 55556260 ID=MsG0380014488.01.T01:exon:28760;Parent=MsG0380014488.01.T01
Chr3 exon 55556466 55556588 55556466 ID=MsG0380014488.01.T01:exon:28761;Parent=MsG0380014488.01.T01
Chr3 exon 55556700 55556843 55556700 ID=MsG0380014488.01.T01:exon:28762;Parent=MsG0380014488.01.T01
Chr3 exon 55557071 55557517 55557071 ID=MsG0380014488.01.T01:exon:28763;Parent=MsG0380014488.01.T01
Chr3 exon 55559132 55559280 55559132 ID=MsG0380014488.01.T01:exon:28764;Parent=MsG0380014488.01.T01
Chr3 exon 55559795 55559921 55559795 ID=MsG0380014488.01.T01:exon:28765;Parent=MsG0380014488.01.T01
Chr3 exon 55559978 55560116 55559978 ID=MsG0380014488.01.T01:exon:28766;Parent=MsG0380014488.01.T01
Chr3 exon 55561185 55561693 55561185 ID=MsG0380014488.01.T01:exon:28767;Parent=MsG0380014488.01.T01
Chr3 exon 55562447 55562542 55562447 ID=MsG0380014488.01.T01:exon:28768;Parent=MsG0380014488.01.T01
Chr3 CDS 55555453 55555656 55555453 ID=MsG0380014488.01.T01:cds;Parent=MsG0380014488.01.T01
Chr3 CDS 55556260 55556370 55556260 ID=MsG0380014488.01.T01:cds;Parent=MsG0380014488.01.T01
Chr3 CDS 55556466 55556588 55556466 ID=MsG0380014488.01.T01:cds;Parent=MsG0380014488.01.T01
Chr3 CDS 55556700 55556843 55556700 ID=MsG0380014488.01.T01:cds;Parent=MsG0380014488.01.T01
Chr3 CDS 55557071 55557517 55557071 ID=MsG0380014488.01.T01:cds;Parent=MsG0380014488.01.T01
Chr3 CDS 55559132 55559280 55559132 ID=MsG0380014488.01.T01:cds;Parent=MsG0380014488.01.T01
Chr3 CDS 55559795 55559921 55559795 ID=MsG0380014488.01.T01:cds;Parent=MsG0380014488.01.T01
Chr3 CDS 55559978 55560116 55559978 ID=MsG0380014488.01.T01:cds;Parent=MsG0380014488.01.T01
Chr3 CDS 55561185 55561186 55561185 ID=MsG0380014488.01.T01:cds;Parent=MsG0380014488.01.T01
Chr3 three_prime_UTR 55561187 55561693 55561187 ID=MsG0380014488.01.T01:three_prime_utr;Parent=MsG0380014488.01.T01
Chr3 three_prime_UTR 55562447 55562542 55562447 ID=MsG0380014488.01.T01:three_prime_utr;Parent=MsG0380014488.01.T01
Gene Sequence

>MsG0380014488.01.T01

ATGTCGATAGACGATCTGTGTTTTGTGGAATGGAAAGAGCATTTTGTTTCACAAGAGCGTGGCCATCGTATAGTTCACTATTACCTAAAGGATTCTGCCGGGGAATCATTCCTTGCAGTTGTCGGCACTGAGAGGAGTGTTAGACACATGTGCTATGTTATTGCAGAGGAGTTCTTGGAAATTTGTGGAATGGAATTCCACCTGTTTTTTGGATTTCAAATTACAGTATGGCGGCCTGCTCATAATTTGGCACTAGCTCATAAGATCGCAAATGGCAGTGTCAAAGAAGTTAGTGCACGAATGGTGGATGACAAGGACATTCCAAAGAGTAACTCCAAATTATCCAATTCAGACATCGTTTGGTCAGGACTTGCGTGGACATGTGGCAAACAACTCAAACATTATCCTGCTTTTTGCAGAAATGGGATCCAAATTGGGATTCAATCCTTTGTTTTCGTCATGGGCAATGGAGAGAACCATTATGTTGCTTATTTGGAGGATATGTATGAAGATAGGAGGGGGCAGAAAAAGGTTAAAGTAAGGTGGTTTCACCACAATCAGGAAGTCAAGGGTGCAATTCCACCAGCTCTTTCTTCCTTGCACGTTGATACTATCCACAACCCCGAGTCTCTCAGCAACAGCCTCACAGGAGAAGATGAAGATTTGGATGTTGGTGATGATGCAAAGCGAGGAGCCAAGAGGAGTAGAAGTGCTAAGGGTTCTCCTCAGTCTTCTAACGGTCGAGAAGGGGTTAGGAAGTTGATTAGGAGTAATCCAATGATGGGATACCAAACTTTCCAAGTTGTAAATTATGCAAGGCCGGATAGGAGATTGCTTTCTCTGAAAAAGGTTGATTGTCAACCTTGGTTTGATCCCACATACAAGGTTGATGACAAGATAGAGGTACTCTGTCAAGATAGTGGTATCCGAGGCTGCTGGTTCAGGTGTACAATTGTACAGGTAGCTCGGAAACAGCTGAAAGTCCAATATGATGATGTTCAAGATGAAGATGGAAGTGGAAATCTTGAGGAGTGGATCCCTGCTTTTAAGTTGGCCAAGCCTGATAAACTTGAGATGAGACAACCTGGCCGGTCGACCATCAGGCCAGCTCCACCTCTTGAAGAACAAGAGTTGATTGCCGAGGTTGGAACCGCCGTCGATGCATGGTGGAGTGATGGCTTTAACACAAACCTCACTTTGTCTCCATCTTTGGAAAAAGATGCAGACTCAGTTGGGTTTGCTAATTCATGTCATGAAGTTCCTGCTGAGAAGTCTAATAAACCTGATATTGTTGAAGAGAAACTTAAAAGTACCCAAGTTGGTGATATTGAAGATGATGGTGGTAACAACGACAAGGACAACAGTGAGAGTGGTGATAACAACAATGTTAATAATGAGAATAGCGATGCAAAGGTGATTCGGACTTCTATGTTGAGTGTAAAGTGA

Protein sequence

>MsG0380014488.01.T01

MSIDDLCFVEWKEHFVSQERGHRIVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEEFLEICGMEFHLFFGFQITVWRPAHNLALAHKIANGSVKEVSARMVDDKDIPKSNSKLSNSDIVWSGLAWTCGKQLKHYPAFCRNGIQIGIQSFVFVMGNGENHYVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGAIPPALSSLHVDTIHNPESLSNSLTGEDEDLDVGDDAKRGAKRSRSAKGSPQSSNGREGVRKLIRSNPMMGYQTFQVVNYARPDRRLLSLKKVDCQPWFDPTYKVDDKIEVLCQDSGIRGCWFRCTIVQVARKQLKVQYDDVQDEDGSGNLEEWIPAFKLAKPDKLEMRQPGRSTIRPAPPLEEQELIAEVGTAVDAWWSDGFNTNLTLSPSLEKDADSVGFANSCHEVPAEKSNKPDIVEEKLKSTQVGDIEDDGGNNDKDNSESGDNNNVNNENSDAKVIRTSMLSVK*