AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021204.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021204.01.T01 MTR_4g068940 95.559 608 18 3 1 608 1 599 0.0 1198
MsG0480021204.01.T01 MTR_4g068940 93.750 608 13 3 1 608 1 583 0.0 1171
MsG0480021204.01.T01 MTR_4g066650 29.577 497 306 13 48 528 61 529 3.90e-58 205
MsG0480021204.01.T01 MTR_2g098580 28.169 497 313 13 48 528 71 539 2.88e-57 203
MsG0480021204.01.T01 MTR_3g065380 28.370 497 307 13 49 528 57 521 3.70e-56 200
MsG0480021204.01.T01 MTR_3g065410 28.415 549 331 20 49 583 55 555 1.34e-52 190
MsG0480021204.01.T01 MTR_5g097670 28.875 329 198 9 214 528 4 310 8.94e-35 135
MsG0480021204.01.T01 MTR_4g075010 25.833 480 264 18 48 503 7 418 1.62e-31 129
MsG0480021204.01.T01 MTR_4g075030 24.866 374 213 13 19 364 7 340 1.00e-26 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021204.01.T01 AT4G34370 59.872 623 206 13 3 608 2 597 0.0 746
MsG0480021204.01.T01 AT2G16090 60.582 619 205 13 1 607 1 592 0.0 737
MsG0480021204.01.T01 AT2G16090 60.480 625 190 13 1 607 1 586 0.0 737
MsG0480021204.01.T01 AT2G16090 64.835 546 166 10 1 541 1 525 0.0 716
MsG0480021204.01.T01 AT2G16090 62.387 553 176 10 66 607 1 532 0.0 690
MsG0480021204.01.T01 AT2G16090 67.500 480 137 7 66 541 1 465 0.0 667
MsG0480021204.01.T01 AT3G27710 58.414 517 193 10 29 541 26 524 0.0 612
MsG0480021204.01.T01 AT4G34370 62.914 453 130 11 171 608 1 430 0.0 565
MsG0480021204.01.T01 AT3G27720 61.143 350 122 6 194 541 147 484 3.78e-152 447
MsG0480021204.01.T01 AT2G31510 28.759 532 332 14 2 517 18 518 9.27e-62 214
MsG0480021204.01.T01 AT2G31510 29.899 495 305 13 2 485 18 481 5.59e-60 208
MsG0480021204.01.T01 AT2G31510 28.964 473 293 12 60 517 2 446 6.90e-60 207
MsG0480021204.01.T01 AT1G05890 28.736 522 321 15 14 517 23 511 2.12e-59 208
MsG0480021204.01.T01 AT2G31770 26.628 522 337 16 14 517 3 496 5.93e-58 204
MsG0480021204.01.T01 AT1G05890 28.395 486 301 12 48 517 99 553 1.89e-57 203
MsG0480021204.01.T01 AT2G31780 30.496 423 257 15 24 438 42 435 1.38e-55 195
MsG0480021204.01.T01 AT1G65430 27.957 558 342 17 2 534 4 526 6.05e-55 196
MsG0480021204.01.T01 AT2G31760 28.211 475 303 16 48 517 45 486 4.27e-54 192
MsG0480021204.01.T01 AT5G08730 25.885 452 286 17 48 489 10 422 1.25e-28 120
MsG0480021204.01.T01 AT1G05880 21.472 489 332 13 46 522 39 487 1.03e-24 108
MsG0480021204.01.T01 AT1G05880 22.247 445 299 12 46 483 39 443 9.02e-24 105
MsG0480021204.01.T01 AT1G05880 21.429 490 324 13 46 522 39 480 4.15e-23 103
MsG0480021204.01.T01 AT5G63750 23.327 523 301 20 48 509 11 494 6.12e-17 84.7
MsG0480021204.01.T01 AT5G63730 26.715 277 179 9 48 308 11 279 1.47e-15 80.1
MsG0480021204.01.T01 AT5G63760 30.180 222 122 11 120 314 20 235 3.95e-13 72.4
MsG0480021204.01.T01 AT5G63760 30.180 222 122 11 120 314 20 235 3.95e-13 72.4
MsG0480021204.01.T01 AT5G63760 30.180 222 122 11 120 314 20 235 3.95e-13 72.4

Find 123 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTTACTTTCAAGCTTAA+AGG 0.141595 4:+55114056 None:intergenic
AGATTAGGGTTTATATTATT+TGG 0.154369 4:+55116742 None:intergenic
TTTGAAGTTTATGTAGAAAA+AGG 0.183191 4:-55115566 MsG0480021204.01.T01:CDS
CATAAGTTTAGCATATTTAA+AGG 0.183354 4:+55113738 None:intergenic
ACAACCAACTGTACAGAAAA+TGG 0.186953 4:+55114232 None:intergenic
GTGCATCGACAATGATTTAT+TGG 0.189539 4:-55113568 MsG0480021204.01.T01:CDS
TCTATGCCCTTTGATTTATA+TGG 0.230617 4:+55113510 None:intergenic
CTTTAAATATGCTAAACTTA+TGG 0.276659 4:-55113737 MsG0480021204.01.T01:CDS
TCATACTTCTCTGCCATATC+AGG 0.290091 4:+55114813 None:intergenic
ATGAATCAGAAACTGTTAAT+TGG 0.291470 4:-55114575 MsG0480021204.01.T01:CDS
CTTCAGAGCTTCCAGTTTGT+TGG 0.314668 4:-55113482 MsG0480021204.01.T01:CDS
GATCAGAAGAAGGTAGATTA+GGG 0.325754 4:+55116728 None:intergenic
TAAATGTCTATTGTTGGATT+TGG 0.335633 4:-55113436 MsG0480021204.01.T01:intron
GTGGGAATGCAATTCGTGTT+GGG 0.340005 4:-55114722 MsG0480021204.01.T01:CDS
GATTATAGCTGGGTAAATAA+TGG 0.340008 4:-55113961 MsG0480021204.01.T01:CDS
CGTGTTTGATGTGGGAGCTC+TGG 0.345421 4:-55114614 MsG0480021204.01.T01:CDS
TGATCAGAAGAAGGTAGATT+AGG 0.350105 4:+55116727 None:intergenic
AAAATGGGCAAAATTATTAC+TGG 0.353458 4:+55114248 None:intergenic
GCTTTATTGCTCCAACAAAC+TGG 0.371482 4:+55113471 None:intergenic
CTCCCACATCAAACACGAAC+AGG 0.384521 4:+55114620 None:intergenic
AGGGTTTATATTATTTGGAT+TGG 0.385627 4:+55116747 None:intergenic
TCTCTTATTGTCTTCAATGT+AGG 0.390159 4:+55114773 None:intergenic
TAATGCTTATTTATCATCGT+TGG 0.400236 4:-55115604 MsG0480021204.01.T01:CDS
TTCTATTGCTCCCGCTGCTC+AGG 0.411819 4:-55116568 MsG0480021204.01.T01:intron
AAGACAATAAGAGAGTTAAA+TGG 0.413854 4:-55114764 MsG0480021204.01.T01:CDS
CTGAACTCAATGATTATAGC+TGG 0.414125 4:-55113972 MsG0480021204.01.T01:CDS
TGGTAGAAAGCACCCTGATA+TGG 0.419498 4:-55114826 MsG0480021204.01.T01:CDS
ATTCTTGTTGCTTCATCACT+AGG 0.422785 4:+55115437 None:intergenic
GGATCAACAGCAGCAGTTAG+AGG 0.425749 4:-55113806 MsG0480021204.01.T01:CDS
GCATTTATGTTTGCTCAGGC+TGG 0.428355 4:-55115539 MsG0480021204.01.T01:CDS
AATGCTTATTTATCATCGTT+GGG 0.432983 4:-55115603 MsG0480021204.01.T01:CDS
TTCCCACAATGTGGCGTGCT+CGG 0.435694 4:+55114738 None:intergenic
CGGTTTGTGGCACTTTGGAC+AGG 0.440450 4:+55114533 None:intergenic
TTCTTCTTCGACGTCTTGAT+CGG 0.440913 4:+55116644 None:intergenic
TACGGGTAAATGTCTATTGT+TGG 0.448760 4:-55113442 MsG0480021204.01.T01:CDS
CTACTGGCCGTGATCATACT+TGG 0.451535 4:-55114200 MsG0480021204.01.T01:CDS
GAAGGCATTTATGTTTGCTC+AGG 0.464709 4:-55115543 MsG0480021204.01.T01:CDS
TGGTTGTGTGGTGGAGCTAC+TGG 0.468440 4:-55114216 MsG0480021204.01.T01:CDS
ATGCTAAACTTATGGAGATA+AGG 0.473847 4:-55113729 MsG0480021204.01.T01:CDS
TATTTATCATCGTTGGGATG+TGG 0.476215 4:-55115597 MsG0480021204.01.T01:CDS
GGTACATGCATTATCATAAC+CGG 0.485862 4:-55114098 MsG0480021204.01.T01:CDS
ACAAATGTCAGAAGCTGAAA+GGG 0.487072 4:-55113851 MsG0480021204.01.T01:CDS
GGGCAAAGAGGGATCTCTAT+AGG 0.491647 4:-55114119 MsG0480021204.01.T01:CDS
AATGAAACAGAACTTATTTG+AGG 0.494812 4:-55113827 MsG0480021204.01.T01:CDS
CAACCAACTGTACAGAAAAT+GGG 0.495043 4:+55114233 None:intergenic
TAGTGATGAAGCAACAAGAA+TGG 0.496144 4:-55115435 MsG0480021204.01.T01:CDS
GAGCAATAAAGCTGACAATA+CGG 0.496778 4:-55113460 MsG0480021204.01.T01:CDS
CGTAAGCGTGCCAGAGAAGA+AGG 0.497557 4:-55112704 MsG0480021204.01.T01:CDS
GTCCGAGCACGCCACATTGT+GGG 0.497626 4:-55114740 MsG0480021204.01.T01:CDS
AGAAAGCAAAACAAAGCAAA+GGG 0.498108 4:-55116874 None:intergenic
CATACTTGGTCAAGTATAGC+TGG 0.500185 4:-55114186 MsG0480021204.01.T01:CDS
CTGTCCAAAGTGCCACAAAC+CGG 0.503790 4:-55114532 MsG0480021204.01.T01:CDS
TATTATTTGGATTGGATCGA+GGG 0.504087 4:+55116755 None:intergenic
TCAAGAGAAATCAGCTGAGC+GGG 0.505415 4:-55114139 MsG0480021204.01.T01:CDS
GGAGGACTTGCGCAGAGTGA+TGG 0.509123 4:-55115660 MsG0480021204.01.T01:CDS
GTGTTTGATGTGGGAGCTCT+GGG 0.510947 4:-55114613 MsG0480021204.01.T01:CDS
ATCAGCTGAGCGGGCAAAGA+GGG 0.511484 4:-55114130 MsG0480021204.01.T01:CDS
ATATCATGACTCTGGCTCGC+TGG 0.511966 4:-55115501 MsG0480021204.01.T01:CDS
TCCACCGGTTTGTGGCACTT+TGG 0.517904 4:+55114528 None:intergenic
TGGGAATGCAATTCGTGTTG+GGG 0.518482 4:-55114721 MsG0480021204.01.T01:CDS
TATAGCACCATATAAATCAA+AGG 0.523492 4:-55113517 MsG0480021204.01.T01:CDS
ATATTATTTGGATTGGATCG+AGG 0.525334 4:+55116754 None:intergenic
GCTGTCGTAAGAACTTTACT+TGG 0.526473 4:-55114846 MsG0480021204.01.T01:CDS
AACAAATGTCAGAAGCTGAA+AGG 0.528651 4:-55113852 MsG0480021204.01.T01:CDS
ATAGCACCATATAAATCAAA+GGG 0.529766 4:-55113516 MsG0480021204.01.T01:CDS
TTTCTGTCTACAACTTCAGC+TGG 0.532183 4:+55112659 None:intergenic
TTATTGGATTCTATTAATCT+CGG 0.532615 4:-55113552 MsG0480021204.01.T01:CDS
AAGGAAGGAACCTGAGCAGC+GGG 0.534714 4:+55116558 None:intergenic
GCTGTGTTGTGTGTGTGGTA+AGG 0.535620 4:-55116840 MsG0480021204.01.T01:five_prime_UTR
TGTGGGAATGCAATTCGTGT+TGG 0.535934 4:-55114723 MsG0480021204.01.T01:CDS
CTGTACAGTTGGTTGTGTGG+TGG 0.539491 4:-55114225 MsG0480021204.01.T01:CDS
AGCAATAAAGCTGACAATAC+GGG 0.541090 4:-55113459 MsG0480021204.01.T01:CDS
CCCCTGTTCGTGTTTGATGT+GGG 0.548928 4:-55114622 MsG0480021204.01.T01:CDS
CAATTCACTATTCAAATCGA+TGG 0.555614 4:-55116706 MsG0480021204.01.T01:exon
GACACAGCATTTCTTTGTCA+AGG 0.556593 4:-55114934 MsG0480021204.01.T01:CDS
ATAGTGAATTGATCAGAAGA+AGG 0.557738 4:+55116718 None:intergenic
AGTCTGTGTGAGCTTTATAC+CGG 0.559653 4:+55114079 None:intergenic
TGTCCGAGCACGCCACATTG+TGG 0.561018 4:-55114741 MsG0480021204.01.T01:CDS
TATGTGCTGTGTTGTGTGTG+TGG 0.562105 4:-55116845 MsG0480021204.01.T01:five_prime_UTR
AAGAAAGCAAAACAAAGCAA+AGG 0.562786 4:-55116875 None:intergenic
GGAATCACTGATAGTTGCAC+AGG 0.563375 4:-55115781 MsG0480021204.01.T01:intron
CATACTTCTCTGCCATATCA+GGG 0.565467 4:+55114814 None:intergenic
TGTATATATGCTGCAAGCGT+AGG 0.573507 4:-55112773 MsG0480021204.01.T01:CDS
TGCTCAGGCTGGTGTTAGTG+TGG 0.573538 4:-55115528 MsG0480021204.01.T01:CDS
GCATATTTAAAGGTGTCGAA+AGG 0.577111 4:+55113748 None:intergenic
TGAACTCAATGATTATAGCT+GGG 0.579869 4:-55113971 MsG0480021204.01.T01:CDS
AAACTGAAAGATATCATACA+AGG 0.580876 4:-55114039 MsG0480021204.01.T01:CDS
TTTCTGTACAGTTGGTTGTG+TGG 0.585716 4:-55114228 MsG0480021204.01.T01:CDS
AAGTAAACGCATCAGATGCA+TGG 0.588761 4:-55114898 MsG0480021204.01.T01:CDS
GTGGATGAATATCATGACTC+TGG 0.592583 4:-55115509 MsG0480021204.01.T01:CDS
CTTAATCAGTCAGAAGAGAG+TGG 0.594834 4:-55112737 MsG0480021204.01.T01:CDS
CAAACGCATATGAATATGAA+AGG 0.599466 4:+55113908 None:intergenic
CGACGACAAAAGTGAAGGGA+AGG 0.599701 4:+55116811 None:intergenic
ATTCCGACGACAAAAGTGAA+GGG 0.601275 4:+55116807 None:intergenic
ATCAAGAGAAATCAGCTGAG+CGG 0.602973 4:-55114140 MsG0480021204.01.T01:CDS
TTCTTTGTCAAGGTAAACGA+GGG 0.608990 4:-55114924 MsG0480021204.01.T01:CDS
AATTCCGACGACAAAAGTGA+AGG 0.611696 4:+55116806 None:intergenic
GGAGTATTGATAATCTTCAT+CGG 0.611843 4:+55116665 None:intergenic
AGTAATGTGTGAAATTTGCA+TGG 0.612800 4:-55115468 MsG0480021204.01.T01:CDS
TCCCACATCAAACACGAACA+GGG 0.614215 4:+55114621 None:intergenic
GCAGCGGGAGCAATAGAAGA+GGG 0.626117 4:+55116573 None:intergenic
TACTTGACCAAGTATGATCA+CGG 0.628425 4:+55114193 None:intergenic
AGCAGCGGGAGCAATAGAAG+AGG 0.631344 4:+55116572 None:intergenic
ATTTATATGGTGCTATACTG+TGG 0.634097 4:+55113523 None:intergenic
AGTATAGCTGGTCACAGCTG+TGG 0.637100 4:-55114174 MsG0480021204.01.T01:CDS
TCCAAAGTGCCACAAACCGG+TGG 0.641185 4:-55114529 MsG0480021204.01.T01:CDS
AATCAGCTGAGCGGGCAAAG+AGG 0.650192 4:-55114131 MsG0480021204.01.T01:CDS
GGGAATGCAATTCGTGTTGG+GGG 0.651226 4:-55114720 MsG0480021204.01.T01:CDS
CCCACATCAAACACGAACAG+GGG 0.653511 4:+55114622 None:intergenic
ATTATTTGGATTGGATCGAG+GGG 0.658616 4:+55116756 None:intergenic
GAAGGAAGGAACCTGAGCAG+CGG 0.659810 4:+55116557 None:intergenic
TTATTTGGATTGGATCGAGG+GGG 0.659930 4:+55116757 None:intergenic
TTTCTTTGTCAAGGTAAACG+AGG 0.661438 4:-55114925 MsG0480021204.01.T01:CDS
CGAATTGCATTCCCACAATG+TGG 0.661456 4:+55114729 None:intergenic
GGGTGATGATGACTTGTGTG+AGG 0.663158 4:-55114700 MsG0480021204.01.T01:CDS
ACACTTGCAGGTGATTACGA+AGG 0.665460 4:-55115802 MsG0480021204.01.T01:intron
CCACATCAAACACGAACAGG+GGG 0.666654 4:+55114623 None:intergenic
AACTGAAAGATATCATACAA+GGG 0.667662 4:-55114038 MsG0480021204.01.T01:CDS
GTATTGATAATCTTCATCGG+TGG 0.686161 4:+55116668 None:intergenic
GTCGAAGAAGAAGATTCCGT+CGG 0.701998 4:-55116633 MsG0480021204.01.T01:CDS
AAGCGTGCCAGAGAAGAAGG+TGG 0.717667 4:-55112701 MsG0480021204.01.T01:CDS
TGTGAGGTAGAATGTTCATG+TGG 0.730408 4:-55114684 MsG0480021204.01.T01:CDS
GAAGCAACAAGAATGGACTG+TGG 0.810129 4:-55115428 MsG0480021204.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATAAATAAAAAAAT+AGG + Chr4:55114473-55114492 None:intergenic 0.0%
!! AAAAAAAAAAAAACACTAAC+AGG + Chr4:55114132-55114151 None:intergenic 15.0%
!! AAGAAACATAAATTATTTCA+TGG + Chr4:55115127-55115146 None:intergenic 15.0%
!! ATGAAATAATTTATGTTTCT+TGG - Chr4:55115126-55115145 MsG0480021204.01.T01:intron 15.0%
!! CATCGAATAAAAAAAAAAAA+AGG + Chr4:55113008-55113027 None:intergenic 15.0%
!!! ATTTTGAAGAAGAAAAAATA+AGG + Chr4:55114174-55114193 None:intergenic 15.0%
!!! TCTATGGTTATATATTTTAT+TGG - Chr4:55113413-55113432 MsG0480021204.01.T01:intron 15.0%
!!! TTATTGTATGATTTTATTGA+AGG - Chr4:55113517-55113536 MsG0480021204.01.T01:CDS 15.0%
!!! TTTTGAAGAAGAAAAAATAA+GGG + Chr4:55114173-55114192 None:intergenic 15.0%
!! AGATTAGGGTTTATATTATT+TGG + Chr4:55112778-55112797 None:intergenic 20.0%
!! CATAAGTTTAGCATATTTAA+AGG + Chr4:55115782-55115801 None:intergenic 20.0%
!! CTTTAAATATGCTAAACTTA+TGG - Chr4:55115780-55115799 MsG0480021204.01.T01:intron 20.0%
!! GCTCAAGATATAAATTAATT+TGG + Chr4:55116626-55116645 None:intergenic 20.0%
!! TAATAAAACCACTGTTAATT+GGG - Chr4:55116445-55116464 MsG0480021204.01.T01:intron 20.0%
!! TGGAAAAATTACATTAACTT+TGG - Chr4:55114540-55114559 MsG0480021204.01.T01:CDS 20.0%
!! TTAATAAAACCACTGTTAAT+TGG - Chr4:55116444-55116463 MsG0480021204.01.T01:intron 20.0%
!! TTATTGGATTCTATTAATCT+CGG - Chr4:55115965-55115984 MsG0480021204.01.T01:intron 20.0%
!! TTGAAGTTTATGTAGAAAAA+GGG - Chr4:55113952-55113971 MsG0480021204.01.T01:CDS 20.0%
!! TTGTTGTATGTATCATAATA+TGG - Chr4:55115219-55115238 MsG0480021204.01.T01:intron 20.0%
!! TTTCTTCTTCAAAATTTCAT+CGG - Chr4:55114179-55114198 MsG0480021204.01.T01:CDS 20.0%
!!! AAGTAATGGAAAATTAATCA+TGG + Chr4:55116344-55116363 None:intergenic 20.0%
!!! TTGATTAAAATTTGGAACTT+TGG - Chr4:55113110-55113129 MsG0480021204.01.T01:intron 20.0%
!!! TTTGAAGTTTATGTAGAAAA+AGG - Chr4:55113951-55113970 MsG0480021204.01.T01:CDS 20.0%
!!! TTTTGTGTTTATTTAGTCTA+TGG - Chr4:55113397-55113416 MsG0480021204.01.T01:intron 20.0%
!!! TTTTTTTTTTGTTGAGTTTC+TGG - Chr4:55113149-55113168 MsG0480021204.01.T01:intron 20.0%
! AAAATGGGCAAAATTATTAC+TGG + Chr4:55115272-55115291 None:intergenic 25.0%
! AAACTGAAAGATATCATACA+AGG - Chr4:55115478-55115497 MsG0480021204.01.T01:CDS 25.0%
! AACTGAAAGATATCATACAA+GGG - Chr4:55115479-55115498 MsG0480021204.01.T01:CDS 25.0%
! AAGACAATAAGAGAGTTAAA+TGG - Chr4:55114753-55114772 MsG0480021204.01.T01:CDS 25.0%
! AAGATTCATATAACCAATCA+AGG - Chr4:55114420-55114439 MsG0480021204.01.T01:intron 25.0%
! AATGAAAATGAAAAGGTTGA+AGG + Chr4:55112981-55113000 None:intergenic 25.0%
! AATGAAACAGAACTTATTTG+AGG - Chr4:55115690-55115709 MsG0480021204.01.T01:intron 25.0%
! AATGCTTATTTATCATCGTT+GGG - Chr4:55113914-55113933 MsG0480021204.01.T01:CDS 25.0%
! AGGGTTTATATTATTTGGAT+TGG + Chr4:55112773-55112792 None:intergenic 25.0%
! AGGTTTGAATGAAAATGAAA+AGG + Chr4:55112988-55113007 None:intergenic 25.0%
! ATAGCACCATATAAATCAAA+GGG - Chr4:55116001-55116020 MsG0480021204.01.T01:intron 25.0%
! ATGAATCAGAAACTGTTAAT+TGG - Chr4:55114942-55114961 MsG0480021204.01.T01:intron 25.0%
! ATTACAGAAGAAAAACATTC+TGG - Chr4:55115511-55115530 MsG0480021204.01.T01:CDS 25.0%
! ATTCTTGCTCAATTTATTGA+AGG - Chr4:55113351-55113370 MsG0480021204.01.T01:intron 25.0%
! GAATTCTTAATGTTACATGA+TGG - Chr4:55114216-55114235 MsG0480021204.01.T01:CDS 25.0%
! GTTTAGCTATTAAATTGTGA+CGG + Chr4:55113207-55113226 None:intergenic 25.0%
! TAAATGTCTATTGTTGGATT+TGG - Chr4:55116081-55116100 MsG0480021204.01.T01:intron 25.0%
! TAATATTAACCACTAGAAGT+TGG + Chr4:55113610-55113629 None:intergenic 25.0%
! TAATGCTTATTTATCATCGT+TGG - Chr4:55113913-55113932 MsG0480021204.01.T01:CDS 25.0%
! TATAGCACCATATAAATCAA+AGG - Chr4:55116000-55116019 MsG0480021204.01.T01:intron 25.0%
! TATATGCACAATACAAGTAA+TGG + Chr4:55116358-55116377 None:intergenic 25.0%
! TATGTATCATAATATGGATC+AGG - Chr4:55115225-55115244 MsG0480021204.01.T01:intron 25.0%
! TATGTGTATTCATATACAGA+AGG - Chr4:55113836-55113855 MsG0480021204.01.T01:CDS 25.0%
! TGAATTCTTATATTGAATGC+AGG - Chr4:55115921-55115940 MsG0480021204.01.T01:intron 25.0%
! TGAGAATATATAATGCAAGA+AGG + Chr4:55115075-55115094 None:intergenic 25.0%
! TTCTGTATATGAATACACAT+AGG + Chr4:55113837-55113856 None:intergenic 25.0%
! TTTCATGATTGAATTGTGTA+TGG - Chr4:55116479-55116498 MsG0480021204.01.T01:intron 25.0%
!! TTGAAATGTTTCTGTTATCA+TGG - Chr4:55113549-55113568 MsG0480021204.01.T01:CDS 25.0%
!!! ACAGTGGTTTTATTAAAATC+AGG + Chr4:55116440-55116459 None:intergenic 25.0%
!!! CAGTGGTTTTATTAAAATCA+GGG + Chr4:55116439-55116458 None:intergenic 25.0%
!!! TGAAAAACTCTCTAAGATTT+TGG - Chr4:55115741-55115760 MsG0480021204.01.T01:intron 25.0%
AAAAATGTCAGTGCATAGAA+AGG + Chr4:55113678-55113697 None:intergenic 30.0%
AAAATGAAAAGGTTGAAGGA+AGG + Chr4:55112977-55112996 None:intergenic 30.0%
ACCTGTTATCAGTAACTAAT+TGG - Chr4:55116195-55116214 MsG0480021204.01.T01:intron 30.0%
ACTTGTATTGTGCATATATG+TGG - Chr4:55116360-55116379 MsG0480021204.01.T01:intron 30.0%
AGAAATGTTACTGAGTGAAA+AGG - Chr4:55116716-55116735 MsG0480021204.01.T01:five_prime_UTR 30.0%
AGTAATGTGTGAAATTTGCA+TGG - Chr4:55114049-55114068 MsG0480021204.01.T01:CDS 30.0%
AGTTTATGTAGAAAAAGGGA+AGG - Chr4:55113956-55113975 MsG0480021204.01.T01:CDS 30.0%
ATAGTGAATTGATCAGAAGA+AGG + Chr4:55112802-55112821 None:intergenic 30.0%
ATGCTAAACTTATGGAGATA+AGG - Chr4:55115788-55115807 MsG0480021204.01.T01:CDS 30.0%
CAAACGCATATGAATATGAA+AGG + Chr4:55115612-55115631 None:intergenic 30.0%
CAATTCACTATTCAAATCGA+TGG - Chr4:55112811-55112830 MsG0480021204.01.T01:intron 30.0%
CAGTAACTAATTGGGTTATA+TGG - Chr4:55116204-55116223 MsG0480021204.01.T01:intron 30.0%
CAGTTTACTTTCAAGCTTAA+AGG + Chr4:55115464-55115483 None:intergenic 30.0%
CCCTAAGTATATGAAATTGA+CGG - Chr4:55113250-55113269 MsG0480021204.01.T01:intron 30.0%
CCGTCAATTTCATATACTTA+GGG + Chr4:55113253-55113272 None:intergenic 30.0%
CCTAAGTATATGAAATTGAC+GGG - Chr4:55113251-55113270 MsG0480021204.01.T01:intron 30.0%
CCTGTTATCAGTAACTAATT+GGG - Chr4:55116196-55116215 MsG0480021204.01.T01:intron 30.0%
CTAAGTATATGAAATTGACG+GGG - Chr4:55113252-55113271 MsG0480021204.01.T01:intron 30.0%
CTTGTATTGTGCATATATGT+GGG - Chr4:55116361-55116380 MsG0480021204.01.T01:intron 30.0%
GAAAAATGGTGGTTGTAATT+TGG - Chr4:55115012-55115031 MsG0480021204.01.T01:intron 30.0%
GATTATAGCTGGGTAAATAA+TGG - Chr4:55115556-55115575 MsG0480021204.01.T01:CDS 30.0%
GTTGTTGTAACATGAAAAAG+TGG - Chr4:55116598-55116617 MsG0480021204.01.T01:CDS 30.0%
TATGTGAAGTTGAATCGTTT+GGG - Chr4:55113651-55113670 MsG0480021204.01.T01:intron 30.0%
TCTCTTATTGTCTTCAATGT+AGG + Chr4:55114747-55114766 None:intergenic 30.0%
TGAACTCAATGATTATAGCT+GGG - Chr4:55115546-55115565 MsG0480021204.01.T01:CDS 30.0%
TGAATGAATATATTGCATCG+TGG - Chr4:55116505-55116524 MsG0480021204.01.T01:intron 30.0%
TGGTTTAGAGACTAAATTGA+TGG - Chr4:55113325-55113344 MsG0480021204.01.T01:intron 30.0%
TTAAAATCAGGGTGAAATCA+AGG + Chr4:55116428-55116447 None:intergenic 30.0%
TTATGTGAAGTTGAATCGTT+TGG - Chr4:55113650-55113669 MsG0480021204.01.T01:intron 30.0%
! AATTTGGTTAGCTGTATTTG+CGG - Chr4:55115028-55115047 MsG0480021204.01.T01:intron 30.0%
! AATTTTTCCAGTCTTTCATG+AGG + Chr4:55114530-55114549 None:intergenic 30.0%
! ATATTATTTGGATTGGATCG+AGG + Chr4:55112766-55112785 None:intergenic 30.0%
! ATTTTTCCAGTCTTTCATGA+GGG + Chr4:55114529-55114548 None:intergenic 30.0%
! TATTATTTGGATTGGATCGA+GGG + Chr4:55112765-55112784 None:intergenic 30.0%
! TCATGGAAAAGTATAATGAC+CGG + Chr4:55115110-55115129 None:intergenic 30.0%
! TCTATGCCCTTTGATTTATA+TGG + Chr4:55116010-55116029 None:intergenic 30.0%
! TTAGTGGGTAACATTAAGAA+TGG - Chr4:55114251-55114270 MsG0480021204.01.T01:CDS 30.0%
! TTCATGAGGGTGTAAAAAAA+AGG + Chr4:55114516-55114535 None:intergenic 30.0%
! TTTTCGTGGTTTATAGTCTA+TGG - Chr4:55113580-55113599 MsG0480021204.01.T01:intron 30.0%
!! ATTTATATGGTGCTATACTG+TGG + Chr4:55115997-55116016 None:intergenic 30.0%
!! GGAGTATTGATAATCTTCAT+CGG + Chr4:55112855-55112874 None:intergenic 30.0%
!! TTGGAACTTTGGAATTGATT+TGG - Chr4:55113121-55113140 MsG0480021204.01.T01:intron 30.0%
!! TTGTTTTGTATCGTCGTTTT+TGG - Chr4:55113173-55113192 MsG0480021204.01.T01:intron 30.0%
!! TTTTCTTCAGTTTGACTTTG+TGG - Chr4:55116687-55116706 MsG0480021204.01.T01:CDS 30.0%
!!! AAAACTCTCTAAGATTTTGG+AGG - Chr4:55115744-55115763 MsG0480021204.01.T01:intron 30.0%
!!! TGTTTTGTATCGTCGTTTTT+GGG - Chr4:55113174-55113193 MsG0480021204.01.T01:intron 30.0%
AAAAAATAGGCCATGTCATC+CGG + Chr4:55114460-55114479 None:intergenic 35.0%
AAAACCACTGTTAATTGGGA+TGG - Chr4:55116449-55116468 MsG0480021204.01.T01:intron 35.0%
AAATCCATCCCAATTAACAG+TGG + Chr4:55116456-55116475 None:intergenic 35.0%
AACAAATGTCAGAAGCTGAA+AGG - Chr4:55115665-55115684 MsG0480021204.01.T01:CDS 35.0%
ACAAATGTCAGAAGCTGAAA+GGG - Chr4:55115666-55115685 MsG0480021204.01.T01:intron 35.0%
ACAACCAACTGTACAGAAAA+TGG + Chr4:55115288-55115307 None:intergenic 35.0%
ACTAAGTGAAGTCATCTACA+TGG + Chr4:55113470-55113489 None:intergenic 35.0%
AGCAATAAAGCTGACAATAC+GGG - Chr4:55116058-55116077 MsG0480021204.01.T01:intron 35.0%
ATGTAGATGACTTCACTTAG+TGG - Chr4:55113469-55113488 MsG0480021204.01.T01:CDS 35.0%
CAACCAACTGTACAGAAAAT+GGG + Chr4:55115287-55115306 None:intergenic 35.0%
CCCAATTAGTTACTGATAAC+AGG + Chr4:55116199-55116218 None:intergenic 35.0%
CCCGTCAATTTCATATACTT+AGG + Chr4:55113254-55113273 None:intergenic 35.0%
CTAAATTGAAGTGAGAGTGA+TGG - Chr4:55113305-55113324 MsG0480021204.01.T01:intron 35.0%
CTGAACTCAATGATTATAGC+TGG - Chr4:55115545-55115564 MsG0480021204.01.T01:CDS 35.0%
GAGCAATAAAGCTGACAATA+CGG - Chr4:55116057-55116076 MsG0480021204.01.T01:intron 35.0%
GATCAGAAGAAGGTAGATTA+GGG + Chr4:55112792-55112811 None:intergenic 35.0%
GGTACATGCATTATCATAAC+CGG - Chr4:55115419-55115438 MsG0480021204.01.T01:CDS 35.0%
GTGTATTCATATACAGAAGG+AGG - Chr4:55113839-55113858 MsG0480021204.01.T01:CDS 35.0%
TAACGCTTGAAAACCTTGAT+TGG + Chr4:55114436-55114455 None:intergenic 35.0%
TACGGGTAAATGTCTATTGT+TGG - Chr4:55116075-55116094 MsG0480021204.01.T01:intron 35.0%
TACTTGACCAAGTATGATCA+CGG + Chr4:55115327-55115346 None:intergenic 35.0%
TAGTGATGAAGCAACAAGAA+TGG - Chr4:55114082-55114101 MsG0480021204.01.T01:CDS 35.0%
TATTTATCATCGTTGGGATG+TGG - Chr4:55113920-55113939 MsG0480021204.01.T01:CDS 35.0%
TGATCAGAAGAAGGTAGATT+AGG + Chr4:55112793-55112812 None:intergenic 35.0%
TGTAGATGACTTCACTTAGT+GGG - Chr4:55113470-55113489 MsG0480021204.01.T01:CDS 35.0%
TGTGTCCAACCTGTAAAAAT+AGG + Chr4:55114569-55114588 None:intergenic 35.0%
TTCTTTGTCAAGGTAAACGA+GGG - Chr4:55114593-55114612 MsG0480021204.01.T01:CDS 35.0%
TTTCTTTGTCAAGGTAAACG+AGG - Chr4:55114592-55114611 MsG0480021204.01.T01:CDS 35.0%
! ATTATTTGGATTGGATCGAG+GGG + Chr4:55112764-55112783 None:intergenic 35.0%
! ATTCTTGTTGCTTCATCACT+AGG + Chr4:55114083-55114102 None:intergenic 35.0%
! CATGGAAAAGTATAATGACC+GGG + Chr4:55115109-55115128 None:intergenic 35.0%
! GCGTTTGCGTTTTATATGTT+TGG - Chr4:55115625-55115644 MsG0480021204.01.T01:CDS 35.0%
! GTATTGATAATCTTCATCGG+TGG + Chr4:55112852-55112871 None:intergenic 35.0%
! GTGCATCGACAATGATTTAT+TGG - Chr4:55115949-55115968 MsG0480021204.01.T01:intron 35.0%
! TAAGTGTTGTGCTTTAGATG+AGG - Chr4:55115862-55115881 MsG0480021204.01.T01:intron 35.0%
!! GCATATTTAAAGGTGTCGAA+AGG + Chr4:55115772-55115791 None:intergenic 35.0%
AAAAAAGCCACCTTCTTCTC+TGG + Chr4:55116826-55116845 None:intergenic 40.0%
AAGTAAACGCATCAGATGCA+TGG - Chr4:55114619-55114638 MsG0480021204.01.T01:CDS 40.0%
AATGGACCGCACATAAATAG+TGG - Chr4:55114329-55114348 MsG0480021204.01.T01:intron 40.0%
AATTCCGACGACAAAAGTGA+AGG + Chr4:55112714-55112733 None:intergenic 40.0%
AGAAGCAACGGAATAATACG+AGG + Chr4:55116134-55116153 None:intergenic 40.0%
ATCAAGAGAAATCAGCTGAG+CGG - Chr4:55115377-55115396 MsG0480021204.01.T01:intron 40.0%
ATGGCGTATTGTCATGTTAG+TGG - Chr4:55114235-55114254 MsG0480021204.01.T01:CDS 40.0%
ATTCCGACGACAAAAGTGAA+GGG + Chr4:55112713-55112732 None:intergenic 40.0%
CAACAACAACCAAGCCTTTA+CGG + Chr4:55115199-55115218 None:intergenic 40.0%
CAGCATAAAGAGAGAAGCAA+CGG + Chr4:55116146-55116165 None:intergenic 40.0%
CATACTTCTCTGCCATATCA+GGG + Chr4:55114706-55114725 None:intergenic 40.0%
CATACTTGGTCAAGTATAGC+TGG - Chr4:55115331-55115350 MsG0480021204.01.T01:intron 40.0%
CTTAATCAGTCAGAAGAGAG+TGG - Chr4:55116780-55116799 MsG0480021204.01.T01:five_prime_UTR 40.0%
GAAGCAACGGAATAATACGA+GGG + Chr4:55116133-55116152 None:intergenic 40.0%
GACACAGCATTTCTTTGTCA+AGG - Chr4:55114583-55114602 MsG0480021204.01.T01:CDS 40.0%
GATCATAGTTGTATCGGGAT+CGG - Chr4:55116385-55116404 MsG0480021204.01.T01:intron 40.0%
GCTGTCGTAAGAACTTTACT+TGG - Chr4:55114671-55114690 MsG0480021204.01.T01:CDS 40.0%
GGAATACTCACCAAAATGCT+TGG + Chr4:55115054-55115073 None:intergenic 40.0%
GTCCAACCTGTAAAAATAGG+CGG + Chr4:55114566-55114585 None:intergenic 40.0%
GTCTCAACATGTACACTTTG+TGG - Chr4:55116260-55116279 MsG0480021204.01.T01:intron 40.0%
GTGGATGAATATCATGACTC+TGG - Chr4:55114008-55114027 MsG0480021204.01.T01:CDS 40.0%
GTGGGAGATCATAGTTGTAT+CGG - Chr4:55116379-55116398 MsG0480021204.01.T01:intron 40.0%
TATAATGACCGGGAACAAGT+TGG + Chr4:55115099-55115118 None:intergenic 40.0%
TATGGTGATCCAACTTCTAG+TGG - Chr4:55113598-55113617 MsG0480021204.01.T01:intron 40.0%
TCATACTTCTCTGCCATATC+AGG + Chr4:55114707-55114726 None:intergenic 40.0%
TGACTTCACTTAGTGGGATA+AGG - Chr4:55113476-55113495 MsG0480021204.01.T01:CDS 40.0%
TGGCGTATTGTCATGTTAGT+GGG - Chr4:55114236-55114255 MsG0480021204.01.T01:CDS 40.0%
TGGGAGATCATAGTTGTATC+GGG - Chr4:55116380-55116399 MsG0480021204.01.T01:intron 40.0%
TGTACACTTTGTGGTCATGT+TGG - Chr4:55116269-55116288 MsG0480021204.01.T01:intron 40.0%
TGTATATATGCTGCAAGCGT+AGG - Chr4:55116744-55116763 MsG0480021204.01.T01:five_prime_UTR 40.0%
TGTGAGGTAGAATGTTCATG+TGG - Chr4:55114833-55114852 MsG0480021204.01.T01:CDS 40.0%
TTCTTCTTCGACGTCTTGAT+CGG + Chr4:55112876-55112895 None:intergenic 40.0%
TTTACACCCTCATGAAAGAC+TGG - Chr4:55114520-55114539 MsG0480021204.01.T01:CDS 40.0%
TTTCTGTACAGTTGGTTGTG+TGG - Chr4:55115289-55115308 MsG0480021204.01.T01:intron 40.0%
TTTCTGTCTACAACTTCAGC+TGG + Chr4:55116861-55116880 None:intergenic 40.0%
TTTGATCCATGTTGCCGTAA+AGG - Chr4:55115182-55115201 MsG0480021204.01.T01:intron 40.0%
! AGTCTGTGTGAGCTTTATAC+CGG + Chr4:55115441-55115460 None:intergenic 40.0%
! ATTCTCATCCAACTTGTTCC+CGG - Chr4:55115088-55115107 MsG0480021204.01.T01:intron 40.0%
! GCTTTATTGCTCCAACAAAC+TGG + Chr4:55116049-55116068 None:intergenic 40.0%
! GTTTTCGTAGAATTCACCGA+CGG + Chr4:55112903-55112922 None:intergenic 40.0%
! TTATTTGGATTGGATCGAGG+GGG + Chr4:55112763-55112782 None:intergenic 40.0%
! TTGCCCATTTTCTGTACAGT+TGG - Chr4:55115281-55115300 MsG0480021204.01.T01:intron 40.0%
!! GAAGGCATTTATGTTTGCTC+AGG - Chr4:55113974-55113993 MsG0480021204.01.T01:CDS 40.0%
!!! TCATGGTTGCAACTTTTTCG+TGG - Chr4:55113566-55113585 MsG0480021204.01.T01:CDS 40.0%
!!! TGAACTGTTTTGACACTTGC+AGG - Chr4:55113703-55113722 MsG0480021204.01.T01:CDS 40.0%
AAACCGGTGGAGAAAAATGG+TGG - Chr4:55115001-55115020 MsG0480021204.01.T01:intron 45.0%
ACACTTGCAGGTGATTACGA+AGG - Chr4:55113715-55113734 MsG0480021204.01.T01:CDS 45.0%
CACAAACCGGTGGAGAAAAA+TGG - Chr4:55114998-55115017 MsG0480021204.01.T01:intron 45.0%
CGAATTGCATTCCCACAATG+TGG + Chr4:55114791-55114810 None:intergenic 45.0%
CTTCAGAGCTTCCAGTTTGT+TGG - Chr4:55116035-55116054 MsG0480021204.01.T01:intron 45.0%
GACCCACCACTATTTATGTG+CGG + Chr4:55114338-55114357 None:intergenic 45.0%
GACCGCACATAAATAGTGGT+GGG - Chr4:55114333-55114352 MsG0480021204.01.T01:intron 45.0%
GCATTTATGTTTGCTCAGGC+TGG - Chr4:55113978-55113997 MsG0480021204.01.T01:CDS 45.0%
GGAATAATACGAGGGAGTTG+CGG + Chr4:55116125-55116144 None:intergenic 45.0%
GGAATCACTGATAGTTGCAC+AGG - Chr4:55113736-55113755 MsG0480021204.01.T01:CDS 45.0%
GTCGAAGAAGAAGATTCCGT+CGG - Chr4:55112884-55112903 MsG0480021204.01.T01:intron 45.0%
GTGCGTGTCCACAAAATCAA+TGG - Chr4:55114311-55114330 MsG0480021204.01.T01:intron 45.0%
GTGGGAATGCAATTCGTGTT+GGG - Chr4:55114795-55114814 MsG0480021204.01.T01:CDS 45.0%
TATGTGCTGTGTTGTGTGTG+TGG - Chr4:55112672-55112691 MsG0480021204.01.T01:CDS 45.0%
TCAAGAGAAATCAGCTGAGC+GGG - Chr4:55115378-55115397 MsG0480021204.01.T01:intron 45.0%
TCACTTAGTGGGATAAGGCT+TGG - Chr4:55113481-55113500 MsG0480021204.01.T01:CDS 45.0%
TCCCACATCAAACACGAACA+GGG + Chr4:55114899-55114918 None:intergenic 45.0%
TGGGAATGCAATTCGTGTTG+GGG - Chr4:55114796-55114815 MsG0480021204.01.T01:CDS 45.0%
TGTGGGAATGCAATTCGTGT+TGG - Chr4:55114794-55114813 MsG0480021204.01.T01:CDS 45.0%
! GTATTTGCGGCCAAGCATTT+TGG - Chr4:55115041-55115060 MsG0480021204.01.T01:intron 45.0%
!! CAACCACCATTTTTCTCCAC+CGG + Chr4:55115007-55115026 None:intergenic 45.0%
!! CAAGGTTTTCAAGCGTTAGC+CGG - Chr4:55114438-55114457 MsG0480021204.01.T01:intron 45.0%
!! CTTCCCTTCACTTTTGTCGT+CGG - Chr4:55112707-55112726 MsG0480021204.01.T01:CDS 45.0%
!! GAAGCAACAAGAATGGACTG+TGG - Chr4:55114089-55114108 MsG0480021204.01.T01:CDS 45.0%
!! TGGTAGAAAGCACCCTGATA+TGG - Chr4:55114691-55114710 MsG0480021204.01.T01:CDS 45.0%
!!! CATTTTTCTCCACCGGTTTG+TGG + Chr4:55115000-55115019 None:intergenic 45.0%
!!! CTTTGGCCGCCTATTTTTAC+AGG - Chr4:55114557-55114576 MsG0480021204.01.T01:CDS 45.0%
!!! GTATCGGGATCGGTTAGTTT+TGG - Chr4:55116395-55116414 MsG0480021204.01.T01:intron 45.0%
!!! TGTGCGGTCCATTGATTTTG+TGG + Chr4:55114322-55114341 None:intergenic 45.0%
!!! TATAGATTAATTTAATTTTA+TGG - Chr4:55115154-55115173 MsG0480021204.01.T01:intron 5.0%
!!! TATTTATTTATTTTTTTGAT+CGG - Chr4:55114480-55114499 MsG0480021204.01.T01:intron 5.0%
!!! TTTATTTATTGATTAAAATT+TGG - Chr4:55113102-55113121 MsG0480021204.01.T01:intron 5.0%
ACCAAGCCTTTACGGCAACA+TGG + Chr4:55115191-55115210 None:intergenic 50.0%
AGTATAGCTGGTCACAGCTG+TGG - Chr4:55115343-55115362 MsG0480021204.01.T01:intron 50.0%
CCACATCAAACACGAACAGG+GGG + Chr4:55114897-55114916 None:intergenic 50.0%
CCCACATCAAACACGAACAG+GGG + Chr4:55114898-55114917 None:intergenic 50.0%
CCCCTGTTCGTGTTTGATGT+GGG - Chr4:55114895-55114914 MsG0480021204.01.T01:CDS 50.0%
CGACGACAAAAGTGAAGGGA+AGG + Chr4:55112709-55112728 None:intergenic 50.0%
CTACTGGCCGTGATCATACT+TGG - Chr4:55115317-55115336 MsG0480021204.01.T01:intron 50.0%
CTCCCACATCAAACACGAAC+AGG + Chr4:55114900-55114919 None:intergenic 50.0%
CTGTACAGTTGGTTGTGTGG+TGG - Chr4:55115292-55115311 MsG0480021204.01.T01:intron 50.0%
GCTGTGTTGTGTGTGTGGTA+AGG - Chr4:55112677-55112696 MsG0480021204.01.T01:CDS 50.0%
GGACCGCACATAAATAGTGG+TGG - Chr4:55114332-55114351 MsG0480021204.01.T01:intron 50.0%
GGATCAACAGCAGCAGTTAG+AGG - Chr4:55115711-55115730 MsG0480021204.01.T01:intron 50.0%
GGGAATGCAATTCGTGTTGG+GGG - Chr4:55114797-55114816 MsG0480021204.01.T01:CDS 50.0%
GGGCAAAGAGGGATCTCTAT+AGG - Chr4:55115398-55115417 MsG0480021204.01.T01:intron 50.0%
GTGTTTGATGTGGGAGCTCT+GGG - Chr4:55114904-55114923 MsG0480021204.01.T01:CDS 50.0%
TCCATGTTGCCGTAAAGGCT+TGG - Chr4:55115187-55115206 MsG0480021204.01.T01:intron 50.0%
! ATATCATGACTCTGGCTCGC+TGG - Chr4:55114016-55114035 MsG0480021204.01.T01:CDS 50.0%
! CTGTCCAAAGTGCCACAAAC+CGG - Chr4:55114985-55115004 MsG0480021204.01.T01:intron 50.0%
! GGGTGATGATGACTTGTGTG+AGG - Chr4:55114817-55114836 MsG0480021204.01.T01:CDS 50.0%
!!! GGCCGCCTATTTTTACAGGT+TGG - Chr4:55114561-55114580 MsG0480021204.01.T01:CDS 50.0%
AAGCGTGCCAGAGAAGAAGG+TGG - Chr4:55116816-55116835 MsG0480021204.01.T01:five_prime_UTR 55.0%
AAGGAAGGAACCTGAGCAGC+GGG + Chr4:55112962-55112981 None:intergenic 55.0%
AATCAGCTGAGCGGGCAAAG+AGG - Chr4:55115386-55115405 MsG0480021204.01.T01:intron 55.0%
AGCAGCGGGAGCAATAGAAG+AGG + Chr4:55112948-55112967 None:intergenic 55.0%
ATCAGCTGAGCGGGCAAAGA+GGG - Chr4:55115387-55115406 MsG0480021204.01.T01:intron 55.0%
CAAGCGTTAGCCGGATGACA+TGG - Chr4:55114447-55114466 MsG0480021204.01.T01:intron 55.0%
CCCCCTGTTCGTGTTTGATG+TGG - Chr4:55114894-55114913 MsG0480021204.01.T01:CDS 55.0%
CGGTTTGTGGCACTTTGGAC+AGG + Chr4:55114987-55115006 None:intergenic 55.0%
CGTAAGCGTGCCAGAGAAGA+AGG - Chr4:55116813-55116832 MsG0480021204.01.T01:five_prime_UTR 55.0%
CGTGTTTGATGTGGGAGCTC+TGG - Chr4:55114903-55114922 MsG0480021204.01.T01:CDS 55.0%
GAAGGAAGGAACCTGAGCAG+CGG + Chr4:55112963-55112982 None:intergenic 55.0%
GCAGCGGGAGCAATAGAAGA+GGG + Chr4:55112947-55112966 None:intergenic 55.0%
TTCCCACAATGTGGCGTGCT+CGG + Chr4:55114782-55114801 None:intergenic 55.0%
TTCTATTGCTCCCGCTGCTC+AGG - Chr4:55112949-55112968 MsG0480021204.01.T01:intron 55.0%
! GAGGGGGTGTGATCGGTAAA+AGG + Chr4:55112747-55112766 None:intergenic 55.0%
! TCCAAAGTGCCACAAACCGG+TGG - Chr4:55114988-55115007 MsG0480021204.01.T01:intron 55.0%
! TGCTCAGGCTGGTGTTAGTG+TGG - Chr4:55113989-55114008 MsG0480021204.01.T01:CDS 55.0%
! TGGTTGTGTGGTGGAGCTAC+TGG - Chr4:55115301-55115320 MsG0480021204.01.T01:intron 55.0%
! TTGGATCGAGGGGGTGTGAT+CGG + Chr4:55112754-55112773 None:intergenic 55.0%
!! TCCACCGGTTTGTGGCACTT+TGG + Chr4:55114992-55115011 None:intergenic 55.0%
GGAGGACTTGCGCAGAGTGA+TGG - Chr4:55113857-55113876 MsG0480021204.01.T01:CDS 60.0%
GTCCGAGCACGCCACATTGT+GGG - Chr4:55114777-55114796 MsG0480021204.01.T01:CDS 60.0%
TGTCCGAGCACGCCACATTG+TGG - Chr4:55114776-55114795 MsG0480021204.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 55112655 55116884 55112655 ID=MsG0480021204.01;Name=MsG0480021204.01
Chr4 mRNA 55112655 55116884 55112655 ID=MsG0480021204.01.T01;Parent=MsG0480021204.01;Name=MsG0480021204.01.T01;_AED=0.31;_eAED=0.33;_QI=175|0.66|0.42|1|0.5|0.57|7|0|608
Chr4 exon 55112655 55112801 55112655 ID=MsG0480021204.01.T01:exon:18842;Parent=MsG0480021204.01.T01
Chr4 exon 55113437 55113596 55113437 ID=MsG0480021204.01.T01:exon:18841;Parent=MsG0480021204.01.T01
Chr4 exon 55113679 55114292 55113679 ID=MsG0480021204.01.T01:exon:18840;Parent=MsG0480021204.01.T01
Chr4 exon 55114506 55114960 55114506 ID=MsG0480021204.01.T01:exon:18839;Parent=MsG0480021204.01.T01
Chr4 exon 55115408 55115684 55115408 ID=MsG0480021204.01.T01:exon:18838;Parent=MsG0480021204.01.T01
Chr4 exon 55115782 55115814 55115782 ID=MsG0480021204.01.T01:exon:18837;Parent=MsG0480021204.01.T01
Chr4 exon 55116569 55116884 55116569 ID=MsG0480021204.01.T01:exon:18836;Parent=MsG0480021204.01.T01
Chr4 five_prime_UTR 55116710 55116884 55116710 ID=MsG0480021204.01.T01:five_prime_utr;Parent=MsG0480021204.01.T01
Chr4 CDS 55116569 55116709 55116569 ID=MsG0480021204.01.T01:cds;Parent=MsG0480021204.01.T01
Chr4 CDS 55115782 55115814 55115782 ID=MsG0480021204.01.T01:cds;Parent=MsG0480021204.01.T01
Chr4 CDS 55115408 55115684 55115408 ID=MsG0480021204.01.T01:cds;Parent=MsG0480021204.01.T01
Chr4 CDS 55114506 55114960 55114506 ID=MsG0480021204.01.T01:cds;Parent=MsG0480021204.01.T01
Chr4 CDS 55113679 55114292 55113679 ID=MsG0480021204.01.T01:cds;Parent=MsG0480021204.01.T01
Chr4 CDS 55113437 55113596 55113437 ID=MsG0480021204.01.T01:cds;Parent=MsG0480021204.01.T01
Chr4 CDS 55112655 55112801 55112655 ID=MsG0480021204.01.T01:cds;Parent=MsG0480021204.01.T01
Gene Sequence

>MsG0480021204.01.T01

ATGGACGACGATTACGCTTCCACCGATGAAGATTATCAATACTCCGATCAAGACGTCGAAGAAGAAGATTCCGTCGGTGAATTCTACGAAAACGACGACGATTCTATTCAGTTGCCCTCTTCTATTGCTCCCGCTGCTCAGGTGATTACGAAGGAATCACTGATAGTTGCACAGAAGGAGGACTTGCGCAGAGTGATGGACATGCTTTCTGTAAGACAAGAACATGCACGCATAATGCTTATTTATCATCGTTGGGATGTGGAAAAATTGTTTGAAGTTTATGTAGAAAAAGGGAAGGCATTTATGTTTGCTCAGGCTGGTGTTAGTGTGGATGAATATCATGACTCTGGCTCGCTGGATAGTGCTATAGTAATGTGTGAAATTTGCATGGACGACATTCCTAGTGATGAAGCAACAAGAATGGACTGTGGTCACTGCTTTTGCAATACCTGTTGGACACAGCATTTCTTTGTCAAGGTAAACGAGGGTCAAAGTAAACGCATCAGATGCATGGCTCACAAATGCAATTCGATTTGTGATGAAGCTGTCGTAAGAACTTTACTTGGTAGAAAGCACCCTGATATGGCAGAGAAGTATGAACGCTTTCTTCTTGAATCCTACATTGAAGACAATAAGAGAGTTAAATGGTGTCCGAGCACGCCACATTGTGGGAATGCAATTCGTGTTGGGGGTGATGATGACTTGTGTGAGGTAGAATGTTCATGTGGTGAACAATTTTGTTTTAAATGCTTGTCAGAAGCACACTCCCCCTGTTCGTGTTTGATGTGGGAGCTCTGGGAAAAGAAGTGTCGAGATGAATCAGAAACTGTTAATTGGATAACTGTTCATACAAAATCCTGTCCAAAGTGCCACAAACCGGTGGAGAAAAATGGTGGTTGTAATTTGGTGCTGTCTGCAACTTGTGTTTCCAGTAATAATTTTGCCCATTTTCTGTACAGTTGGTTGTGTGGTGGAGCTACTGGCCGTGATCATACTTGGTCAAGTATAGCTGGTCACAGCTGTGGTCGCTACAAAGATCAAGAGAAATCAGCTGAGCGGGCAAAGAGGGATCTCTATAGGTACATGCATTATCATAACCGGTATAAAGCTCACACAGACTCCTTTAAGCTTGAAAGTAAACTGAAAGATATCATACAAGGGAAAATTTCTATTACAGAAGAAAAACATTCTGGACGAAAAAAAACTGAACTCAATGATTATAGCTGGGTAAATAATGGACTCTTGAGACTTTTCAGATCTAGACGCGTCCTTTCATATTCATATGCGTTTGCGTTTTATATGTTTGGAGATGAGCTTTTTAAAGAACAAATGTCAGAAGCTGAAAGGGAAATGAAACAGAACTTATTTGAGGATCAACAGCAGCAGTTAGAGGCAAATGTTGAAAAACTCTCTAAGATTTTGGAGGAGCCTTTCGACACCTTTAAATATGCTAAACTTATGGAGATAAGGATGCAGATAATAACTCTGTCTGCACTCATTGATGATCTTTGTAAAAAAATGTATGAGTGCATCGACAATGATTTATTGGATTCTATTAATCTCGGTAGTGTCCACAGTATAGCACCATATAAATCAAAGGGCATAGAGAAAGCTTCAGAGCTTCCAGTTTGTTGGAGCAATAAAGCTGACAATACGGGTAAATGTCTATTGTTGGATTTGGATTCTTGTATATATGCTGCAAGCGTAGGTGTAACAGCAGAGCTTAATCAGTCAGAAGAGAGTGGATGTTCTTCTCGTAAGCGTGCCAGAGAAGAAGGTGGCTTTTTTGATCTAAACTTGCCAGCTGAAGTTGTAGACAGAAATTGA

Protein sequence

>MsG0480021204.01.T01

MDDDYASTDEDYQYSDQDVEEEDSVGEFYENDDDSIQLPSSIAPAAQVITKESLIVAQKEDLRRVMDMLSVRQEHARIMLIYHRWDVEKLFEVYVEKGKAFMFAQAGVSVDEYHDSGSLDSAIVMCEICMDDIPSDEATRMDCGHCFCNTCWTQHFFVKVNEGQSKRIRCMAHKCNSICDEAVVRTLLGRKHPDMAEKYERFLLESYIEDNKRVKWCPSTPHCGNAIRVGGDDDLCEVECSCGEQFCFKCLSEAHSPCSCLMWELWEKKCRDESETVNWITVHTKSCPKCHKPVEKNGGCNLVLSATCVSSNNFAHFLYSWLCGGATGRDHTWSSIAGHSCGRYKDQEKSAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKDIIQGKISITEEKHSGRKKTELNDYSWVNNGLLRLFRSRRVLSYSYAFAFYMFGDELFKEQMSEAEREMKQNLFEDQQQQLEANVEKLSKILEEPFDTFKYAKLMEIRMQIITLSALIDDLCKKMYECIDNDLLDSINLGSVHSIAPYKSKGIEKASELPVCWSNKADNTGKCLLLDLDSCIYAASVGVTAELNQSEESGCSSRKRAREEGGFFDLNLPAEVVDRN*