AlfalfaGEDB | MsG0880045936.01

M. sativa cultivar ZhongmuNo.1 / MsG0880045936.01

KEGG: K04508
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045936.01.T01	XP_013457483.1	92.105	190	11	1	3	188	16	205	1.33E-117	356

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045936.01.T01	Q9FN19	58.065	124	43	3	3	117	16	139	9.07E-41	149

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045936.01.T01	A0A072UNV5	92.105	190	11	1	3	188	16	205	6.33e-118	356

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048178.01	MsG0880045936.01	0.817685	2.900382e-52	2.126576e-49
MsG0080048461.01	MsG0880045936.01	0.810064	1.387622e-50	8.283035e-48
MsG0080048602.01	MsG0880045936.01	0.849968	2.299076e-60	4.434827e-57
MsG0080048765.01	MsG0880045936.01	0.845218	4.658473e-59	7.708644e-56
MsG0080049014.01	MsG0880045936.01	0.803432	3.496782e-49	1.756905e-46
MsG0180000042.01	MsG0880045936.01	0.830109	3.533883e-55	3.687878e-52
MsG0180000065.01	MsG0880045936.01	0.840486	8.447435e-58	1.205070e-54
MsG0180000091.01	MsG0880045936.01	0.830522	2.800909e-55	2.958118e-52
MsG0180000100.01	MsG0880045936.01	0.803006	4.283300e-49	2.128592e-46
MsG0180000101.01	MsG0880045936.01	0.806935	6.458826e-50	3.550751e-47
MsG0180000146.01	MsG0880045936.01	0.814555	1.451456e-51	9.770158e-49
MsG0180000154.01	MsG0880045936.01	0.809877	1.522489e-50	9.043572e-48
MsG0180000195.01	MsG0880045936.01	0.801959	7.040738e-49	3.406934e-46
MsG0180000196.01	MsG0880045936.01	0.842281	2.846311e-58	4.294256e-55
MsG0180000300.01	MsG0880045936.01	0.808234	3.423638e-50	1.947113e-47
MsG0180000394.01	MsG0880045936.01	0.808386	3.177795e-50	1.814579e-47
MsG0180000402.01	MsG0880045936.01	0.811701	6.137130e-51	3.825209e-48
MsG0180000475.01	MsG0880045936.01	0.825582	4.334385e-54	3.966810e-51
MsG0180000494.01	MsG0880045936.01	0.813277	2.777199e-51	1.805651e-48
MsG0180000555.01	MsG0880045936.01	0.877475	6.100337e-69	3.071710e-65
MsG0180000585.01	MsG0880045936.01	0.835239	1.883795e-56	2.290071e-53
MsG0180000680.01	MsG0880045936.01	0.831822	1.342255e-55	1.473460e-52
MsG0180000702.01	MsG0880045936.01	0.835092	2.052179e-56	2.483287e-53
MsG0180000703.01	MsG0880045936.01	0.816953	4.238412e-52	3.046211e-49
MsG0180000732.01	MsG0880045936.01	0.805779	1.132009e-49	6.041872e-47
MsG0180000741.01	MsG0880045936.01	0.888951	3.741467e-73	2.959580e-69
MsG0180000797.01	MsG0880045936.01	0.831301	1.804195e-55	1.949791e-52
MsG0180000821.01	MsG0880045936.01	0.803243	3.825598e-49	1.912827e-46
MsG0180000855.01	MsG0880045936.01	0.831131	1.986432e-55	2.136062e-52
MsG0180000856.01	MsG0880045936.01	0.810893	9.192435e-51	5.609002e-48
MsG0180001173.01	MsG0880045936.01	0.828373	9.323074e-55	9.249340e-52
MsG0180001178.01	MsG0880045936.01	0.807468	4.980507e-50	2.776381e-47
MsG0180001312.01	MsG0880045936.01	0.855733	5.174821e-62	1.206479e-58
MsG0180001315.01	MsG0880045936.01	0.805120	1.556485e-49	8.167712e-47
MsG0180001565.01	MsG0880045936.01	0.803590	3.241661e-49	1.635465e-46
MsG0180001566.01	MsG0880045936.01	0.823187	1.585003e-53	1.355111e-50
MsG0180001570.01	MsG0880045936.01	0.857222	1.891125e-62	4.633852e-59
MsG0180001911.01	MsG0880045936.01	0.809188	2.140276e-50	1.248320e-47
MsG0180001922.01	MsG0880045936.01	0.814308	1.645852e-51	1.100537e-48
MsG0180002071.01	MsG0880045936.01	0.893853	4.267909e-75	4.140127e-71
MsG0180002072.01	MsG0880045936.01	0.858452	8.158450e-63	2.083155e-59
MsG0180002709.01	MsG0880045936.01	0.834569	2.778399e-56	3.310447e-53
MsG0880044573.01	MsG0880045936.01	0.826781	2.247434e-54	2.128319e-51
MsG0880044574.01	MsG0880045936.01	0.826902	2.102528e-54	1.998348e-51
MsG0880044732.01	MsG0880045936.01	0.827098	1.887198e-54	1.803868e-51
MsG0880044917.01	MsG0880045936.01	0.823369	1.437717e-53	1.235374e-50
MsG0880044950.01	MsG0880045936.01	0.821926	3.114544e-53	2.569060e-50
MsG0880045372.01	MsG0880045936.01	0.822157	2.752475e-53	2.285342e-50
MsG0880045393.01	MsG0880045936.01	0.816619	5.036412e-52	3.586455e-49
MsG0880045415.01	MsG0880045936.01	0.819546	1.097201e-52	8.468925e-50
MsG0880045429.01	MsG0880045936.01	0.847986	8.170482e-60	1.477690e-56
MsG0880045450.01	MsG0880045936.01	0.833731	4.506407e-56	5.235215e-53
MsG0880045639.01	MsG0880045936.01	0.823740	1.176927e-53	1.022204e-50
MsG0880045756.01	MsG0880045936.01	0.802451	5.575364e-49	2.732000e-46
MsG0880045827.01	MsG0880045936.01	0.804376	2.225032e-49	1.145429e-46
MsG0880045936.01	MsG0880046020.01	0.801215	1.000271e-48	4.750130e-46
MsG0880045936.01	MsG0880046047.01	0.812454	4.204958e-51	2.674910e-48
MsG0880045936.01	MsG0880046366.01	0.819153	1.348446e-52	1.029439e-49
MsG0880045936.01	MsG0880046531.01	0.821179	4.634175e-53	3.743220e-50
MsG0880045936.01	MsG0880046643.01	0.830732	2.488974e-55	2.645129e-52
MsG0880045936.01	MsG0880047019.01	0.836332	9.955259e-57	1.250736e-53
MsG0880045936.01	MsG0880047497.01	0.828152	1.053872e-54	1.038864e-51
MsG0880045936.01	MsG0880047745.01	0.842934	1.908726e-58	2.938915e-55
MsG0180002894.01	MsG0880045936.01	0.854961	8.683408e-62	1.973153e-58
MsG0180002952.01	MsG0880045936.01	0.847938	8.422585e-60	1.521083e-56
MsG0180002975.01	MsG0880045936.01	0.803027	4.239430e-49	2.108025e-46
MsG0180003031.01	MsG0880045936.01	0.809860	1.535751e-50	9.118019e-48
MsG0180003167.01	MsG0880045936.01	0.828922	6.868064e-55	6.922897e-52
MsG0180003303.01	MsG0880045936.01	0.830395	3.008288e-55	3.165507e-52
MsG0180003444.01	MsG0880045936.01	0.843083	1.742517e-58	2.695563e-55
MsG0180003673.01	MsG0880045936.01	0.818178	2.244110e-52	1.667828e-49
MsG0180003686.01	MsG0880045936.01	0.823691	1.208518e-53	1.048201e-50
MsG0180003810.01	MsG0880045936.01	0.825195	5.351134e-54	4.844077e-51
MsG0180004056.01	MsG0880045936.01	0.805833	1.102736e-49	5.893726e-47
MsG0180004139.01	MsG0880045936.01	0.802673	5.017048e-49	2.472314e-46
MsG0180004372.01	MsG0880045936.01	0.858893	6.025179e-63	1.561632e-59
MsG0180004388.01	MsG0880045936.01	0.806438	8.227443e-50	4.465577e-47
MsG0180004437.01	MsG0880045936.01	0.812990	3.210780e-51	2.071354e-48
MsG0180004462.01	MsG0880045936.01	0.814274	1.674572e-51	1.118647e-48
MsG0180004465.01	MsG0880045936.01	0.833909	4.067062e-56	4.751006e-53
MsG0180004585.01	MsG0880045936.01	0.802877	4.553293e-49	2.255502e-46
MsG0180004598.01	MsG0880045936.01	0.830949	2.200891e-55	2.353986e-52
MsG0180004691.01	MsG0880045936.01	0.836076	1.156527e-56	1.441757e-53
MsG0180004730.01	MsG0880045936.01	0.838034	3.654739e-57	4.835427e-54
MsG0180004789.01	MsG0880045936.01	0.809704	1.659234e-50	9.810911e-48
MsG0180004797.01	MsG0880045936.01	0.842148	3.085284e-58	4.635396e-55
MsG0180004871.01	MsG0880045936.01	0.802874	4.561483e-49	2.259378e-46
MsG0180005050.01	MsG0880045936.01	0.845254	4.553715e-59	7.544312e-56
MsG0180005185.01	MsG0880045936.01	0.810115	1.352911e-50	8.086667e-48
MsG0180005228.01	MsG0880045936.01	0.834709	2.562392e-56	3.065132e-53
MsG0180005285.01	MsG0880045936.01	0.801477	8.840462e-49	4.226056e-46
MsG0180005304.01	MsG0880045936.01	0.827129	1.854735e-54	1.774441e-51
MsG0180005504.01	MsG0880045936.01	0.808683	2.745005e-50	1.579547e-47
MsG0180005944.01	MsG0880045936.01	0.812167	4.857973e-51	3.066281e-48
MsG0180005985.01	MsG0880045936.01	0.805586	1.242755e-49	6.599913e-47
MsG0180006023.01	MsG0880045936.01	0.851680	7.579548e-61	1.546115e-57
MsG0180006098.01	MsG0880045936.01	0.837852	4.068952e-57	5.353738e-54
MsG0180006128.01	MsG0880045936.01	0.825622	4.240090e-54	3.885068e-51
MsG0180006186.01	MsG0880045936.01	0.818372	2.028321e-52	1.515653e-49
MsG0180006207.01	MsG0880045936.01	0.874486	6.503393e-68	2.933280e-64
MsG0180006210.01	MsG0880045936.01	-0.830124	3.503152e-55	3.657480e-52
MsG0180006235.01	MsG0880045936.01	0.815639	8.337635e-52	5.780456e-49
MsG0280006367.01	MsG0880045936.01	0.854736	1.009389e-61	2.276606e-58
MsG0280006432.01	MsG0880045936.01	0.819896	9.126686e-53	7.113843e-50
MsG0780040488.01	MsG0880045936.01	0.842628	2.301942e-58	3.510734e-55
MsG0780040669.01	MsG0880045936.01	0.800008	1.762593e-48	8.117956e-46
MsG0780040712.01	MsG0880045936.01	0.820443	6.840930e-53	5.413697e-50
MsG0780040742.01	MsG0880045936.01	0.819859	9.310043e-53	7.249081e-50
MsG0780040788.01	MsG0880045936.01	0.821607	3.691080e-53	3.016998e-50
MsG0780040947.01	MsG0880045936.01	0.803472	3.430373e-49	1.725323e-46
MsG0780041033.01	MsG0880045936.01	0.895168	1.238324e-75	1.270002e-71
MsG0780041245.01	MsG0880045936.01	0.841397	4.872561e-58	7.150800e-55
MsG0780041305.01	MsG0880045936.01	0.840452	8.622235e-58	1.228722e-54
MsG0780041310.01	MsG0880045936.01	0.810491	1.122801e-50	6.777499e-48
MsG0780041370.01	MsG0880045936.01	0.812997	3.198556e-51	2.063930e-48
MsG0780041371.01	MsG0880045936.01	0.809946	1.471751e-50	8.757901e-48
MsG0780041469.01	MsG0880045936.01	0.808826	2.559300e-50	1.478218e-47
MsG0780041667.01	MsG0880045936.01	0.819951	8.870083e-53	6.924351e-50
MsG0780041754.01	MsG0880045936.01	0.804469	2.127942e-49	1.098030e-46
MsG0780041787.01	MsG0880045936.01	0.810093	1.368214e-50	8.172876e-48
MsG0880042161.01	MsG0880045936.01	0.808770	2.630086e-50	1.516845e-47
MsG0880042404.01	MsG0880045936.01	0.807062	6.073686e-50	3.349975e-47
MsG0880042518.01	MsG0880045936.01	0.806837	6.775226e-50	3.715346e-47
MsG0880042698.01	MsG0880045936.01	0.812640	3.829893e-51	2.448134e-48
MsG0880042783.01	MsG0880045936.01	0.825799	3.848183e-54	3.544029e-51
MsG0880042965.01	MsG0880045936.01	0.806516	7.921775e-50	4.308239e-47
MsG0880042983.01	MsG0880045936.01	0.832510	9.073111e-56	1.016302e-52
MsG0880043145.01	MsG0880045936.01	0.833844	4.223411e-56	4.923885e-53
MsG0880043480.01	MsG0880045936.01	0.808899	2.469178e-50	1.428885e-47
MsG0880043522.01	MsG0880045936.01	0.835349	1.767516e-56	2.155854e-53
MsG0880043591.01	MsG0880045936.01	0.814121	1.810645e-51	1.204489e-48
MsG0880043750.01	MsG0880045936.01	0.808743	2.666201e-50	1.536564e-47
MsG0880043921.01	MsG0880045936.01	0.830405	2.991274e-55	3.148510e-52
MsG0280010614.01	MsG0880045936.01	0.837757	4.305936e-57	5.649336e-54
MsG0280010712.01	MsG0880045936.01	0.821471	3.966830e-53	3.230160e-50
MsG0280010816.01	MsG0880045936.01	0.847608	1.038285e-59	1.855511e-56
MsG0280010932.01	MsG0880045936.01	0.860855	1.543567e-63	4.280146e-60
MsG0280010976.01	MsG0880045936.01	0.815568	8.650293e-52	5.985270e-49
MsG0280011032.01	MsG0880045936.01	0.817122	3.884004e-52	2.804091e-49
MsG0280011075.01	MsG0880045936.01	0.816127	6.490093e-52	4.559822e-49
MsG0280011085.01	MsG0880045936.01	0.826559	2.538560e-54	2.388832e-51
MsG0280011131.01	MsG0880045936.01	0.849543	3.023274e-60	5.749892e-57
MsG0280011182.01	MsG0880045936.01	0.828276	9.838980e-55	9.733197e-52
MsG0280011201.01	MsG0880045936.01	0.823411	1.405679e-53	1.209279e-50
MsG0280011285.01	MsG0880045936.01	0.836025	1.191570e-56	1.482973e-53
MsG0280011293.01	MsG0880045936.01	0.841667	4.134317e-58	6.118015e-55
MsG0280011334.01	MsG0880045936.01	0.818697	1.712158e-52	1.290753e-49
MsG0280011336.01	MsG0880045936.01	0.854698	1.035226e-61	2.331919e-58
MsG0280011410.01	MsG0880045936.01	0.817497	3.197984e-52	2.332766e-49
MsG0280011444.01	MsG0880045936.01	0.804599	1.999387e-49	1.035174e-46
MsG0380012020.01	MsG0880045936.01	0.821080	4.882354e-53	3.933034e-50
MsG0380012033.01	MsG0880045936.01	0.800631	1.316270e-48	6.159090e-46
MsG0380012124.01	MsG0880045936.01	0.816556	5.202717e-52	3.698404e-49
MsG0380012365.01	MsG0880045936.01	0.820260	7.535366e-53	5.933022e-50
MsG0380012458.01	MsG0880045936.01	0.813180	2.916733e-51	1.891273e-48
MsG0380012460.01	MsG0880045936.01	0.806259	8.972374e-50	4.847988e-47
MsG0380013176.01	MsG0880045936.01	0.803756	2.994732e-49	1.517291e-46
MsG0380013363.01	MsG0880045936.01	0.842773	2.106426e-58	3.227209e-55
MsG0380013834.01	MsG0880045936.01	0.816406	5.620663e-52	3.979194e-49
MsG0380014138.01	MsG0880045936.01	0.829365	5.362100e-55	5.476783e-52
MsG0380014162.01	MsG0880045936.01	-0.806178	9.330035e-50	5.030854e-47
MsG0380014488.01	MsG0880045936.01	0.838934	2.140372e-57	2.910487e-54
MsG0380014489.01	MsG0880045936.01	0.813726	2.211759e-51	1.455738e-48
MsG0380014573.01	MsG0880045936.01	0.841700	4.052900e-58	6.003440e-55
MsG0380014701.01	MsG0880045936.01	0.819200	1.315908e-52	1.005912e-49
MsG0380014880.01	MsG0880045936.01	0.811119	8.209562e-51	5.039160e-48
MsG0680030753.01	MsG0880045936.01	0.808629	2.819116e-50	1.619886e-47
MsG0680031114.01	MsG0880045936.01	0.830543	2.768714e-55	2.925833e-52
MsG0680031262.01	MsG0880045936.01	0.825236	5.231415e-54	4.741112e-51
MsG0680031506.01	MsG0880045936.01	0.805580	1.246315e-49	6.617751e-47
MsG0680033302.01	MsG0880045936.01	0.856204	3.767464e-62	8.922079e-59
MsG0680034067.01	MsG0880045936.01	0.849579	2.953169e-60	5.623847e-57
MsG0680034093.01	MsG0880045936.01	0.803243	3.826135e-49	1.913080e-46
MsG0680034757.01	MsG0880045936.01	0.841373	4.943750e-58	7.249374e-55
MsG0680035346.01	MsG0880045936.01	0.803300	3.722891e-49	1.864149e-46
MsG0680035475.01	MsG0880045936.01	0.802583	5.237857e-49	2.575183e-46
MsG0680035573.01	MsG0880045936.01	0.801258	9.802104e-49	4.659952e-46
MsG0680035656.01	MsG0880045936.01	0.814583	1.431106e-51	9.640238e-49
MsG0480018460.01	MsG0880045936.01	0.819191	1.322004e-52	1.010334e-49
MsG0480018640.01	MsG0880045936.01	0.827128	1.856023e-54	1.775601e-51
MsG0480019037.01	MsG0880045936.01	0.800571	1.353853e-48	6.325197e-46
MsG0480019289.01	MsG0880045936.01	0.811338	7.358136e-51	4.542557e-48
MsG0480019373.01	MsG0880045936.01	0.811423	7.054438e-51	4.365057e-48
MsG0480019435.01	MsG0880045936.01	0.810448	1.147196e-50	6.916722e-48
MsG0480019493.01	MsG0880045936.01	0.833580	4.914021e-56	5.683131e-53
MsG0480019816.01	MsG0880045936.01	0.825619	4.245924e-54	3.890151e-51
MsG0480019927.01	MsG0880045936.01	0.823876	1.093643e-53	9.534436e-51
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MsG0780039845.01	MsG0880045936.01	0.816498	5.360503e-52	3.804422e-49
MsG0780039900.01	MsG0880045936.01	0.810372	1.190864e-50	7.165785e-48
MsG0780040044.01	MsG0880045936.01	0.821721	3.472513e-53	2.847687e-50
MsG0780040074.01	MsG0880045936.01	0.816369	5.731160e-52	4.053420e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045936.01.T01	MTR_4g095058	92.105	190	11	1	3	188	16	205	1.61e-121	356
MsG0880045936.01.T01	MTR_4g095058	92.553	188	10	1	3	186	16	203	4.62e-120	353
MsG0880045936.01.T01	MTR_5g016350	62.176	193	66	4	3	188	16	208	1.24e-63	207
MsG0880045936.01.T01	MTR_5g016370	49.038	208	83	5	3	188	16	222	1.38e-57	191
MsG0880045936.01.T01	MTR_5g016350	56.835	139	53	4	57	188	6	144	8.32e-28	110

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045936.01.T01	AT5G67320	58.065	124	43	3	3	117	16	139	9.25e-42	149

Find 36 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACACATTCGGCTTATACTTT+TGG	0.274410	8:+66675265	MsG0880045936.01.T01:CDS
GATGCTAACATTATTCAAAT+TGG	0.297889	8:-66675392	None:intergenic
ATTAGCAAATGCCCCATTGA+TGG	0.333030	8:+66675301	MsG0880045936.01.T01:CDS
CGGTACCAAGTTTCCATCAA+TGG	0.392522	8:-66675314	None:intergenic
TCTTGTGACATTTGTTCAAA+AGG	0.412995	8:+66675345	MsG0880045936.01.T01:CDS
TACCGCAGGTTTCACACATT+CGG	0.417601	8:+66675252	MsG0880045936.01.T01:CDS
GAGAAGTAAAGAATTAGAAA+AGG	0.420779	8:+66675648	MsG0880045936.01.T01:CDS
GGTACCAAGTTTCCATCAAT+GGG	0.424902	8:-66675313	None:intergenic
CTTGTGACATTTGTTCAAAA+GGG	0.440462	8:+66675346	MsG0880045936.01.T01:CDS
GGCAAATTATTAGTGAAAGA+AGG	0.452395	8:+66675608	MsG0880045936.01.T01:CDS
GAGACAAGGAAAGACATCAT+AGG	0.453256	8:+66675698	MsG0880045936.01.T01:CDS
AGCATGAAGTGAAGACTGAC+AGG	0.477378	8:+66675830	MsG0880045936.01.T01:CDS
AGAAAGAATTTGAAAAGGAT+AGG	0.478845	8:+66675722	MsG0880045936.01.T01:CDS
CAAAAGATGTGCATGAACTT+AGG	0.491410	8:+66675587	MsG0880045936.01.T01:CDS
ATGCCCCATTGATGGAAACT+TGG	0.505487	8:+66675309	MsG0880045936.01.T01:CDS
TAGGGAGAAAGAATTTGAAA+AGG	0.512580	8:+66675717	MsG0880045936.01.T01:CDS
AGACAAGGAAAGACATCATA+GGG	0.514191	8:+66675699	MsG0880045936.01.T01:CDS
ACTGTAAAACATGAAGTGAA+TGG	0.515049	8:+66675880	MsG0880045936.01.T01:CDS
GAAGTGAATGGAACAGTTCG+AGG	0.525952	8:+66675892	MsG0880045936.01.T01:CDS
GATGGAAACTTGGTACCGCC+AGG	0.545312	8:+66675319	MsG0880045936.01.T01:CDS
CTGCCAGTGTGATGCAGACC+TGG	0.547927	8:+66675525	MsG0880045936.01.T01:intron
GAAAGAATTTGAAAAGGATA+GGG	0.554889	8:+66675723	MsG0880045936.01.T01:CDS
AGTGAAGACTGACAGGGAAG+TGG	0.580312	8:+66675837	MsG0880045936.01.T01:CDS
ACAAATGTCACAAGAGCACC+TGG	0.585001	8:-66675337	None:intergenic
GGGACTGCAGTACTTTGAGA+TGG	0.596164	8:+66675366	MsG0880045936.01.T01:CDS
ACGCGGACGAGCAAGAGACA+AGG	0.606388	8:+66675684	MsG0880045936.01.T01:CDS
TTGTGTTACATCACTACCGC+AGG	0.610715	8:+66675238	MsG0880045936.01.T01:CDS
AAGTAAGACTGACAAAGAAG+TGG	0.615033	8:+66675780	MsG0880045936.01.T01:CDS
AAGATCCAAAGGTTGTAACA+AGG	0.661692	8:-66675560	None:intergenic
AGCCGAATGTGTGAAACCTG+CGG	0.704756	8:-66675254	None:intergenic
AGTGGTCAGAGATCAAGACA+AGG	0.725804	8:+66675798	MsG0880045936.01.T01:CDS
AAGGAGCATGAAGCTGAACG+CGG	0.731046	8:+66675667	MsG0880045936.01.T01:CDS
GCATGAAGTGAAGACTGACA+GGG	0.739919	8:+66675831	MsG0880045936.01.T01:CDS
GTACCAAGTTTCCATCAATG+GGG	0.751360	8:-66675312	None:intergenic
AGTGGTCAGAGATCAAGACA+AGG	0.752627	8:+66675855	MsG0880045936.01.T01:CDS
AATGTCACAAGAGCACCTGG+CGG	0.788525	8:-66675334	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATTATGTTGACAAAAATC+AGG	-	Chr8:66675433-66675452	None:intergenic	20.0%
!!!	ATGTAAACTATTTTCACAAA+CGG	-	Chr8:66675925-66675944	None:intergenic	20.0%
!	AAGAAGGAAAAAACTACATA+AGG	+	Chr8:66675624-66675643	MsG0880045936.01.T01:CDS	25.0%
!	AGAAAGAATTTGAAAAGGAT+AGG	+	Chr8:66675722-66675741	MsG0880045936.01.T01:CDS	25.0%
!	ATTAATCAACATGAAACCTA+GGG	-	Chr8:66675492-66675511	None:intergenic	25.0%
!	GAAAGAATTTGAAAAGGATA+GGG	+	Chr8:66675723-66675742	MsG0880045936.01.T01:CDS	25.0%
!	GAGAAGTAAAGAATTAGAAA+AGG	+	Chr8:66675648-66675667	MsG0880045936.01.T01:CDS	25.0%
!	GATGCTAACATTATTCAAAT+TGG	-	Chr8:66675395-66675414	None:intergenic	25.0%
	ACTGTAAAACATGAAGTGAA+TGG	+	Chr8:66675880-66675899	MsG0880045936.01.T01:CDS	30.0%
	ATGTTGACAAAAATCAGGAA+TGG	-	Chr8:66675428-66675447	None:intergenic	30.0%
	CATTAATCAACATGAAACCT+AGG	-	Chr8:66675493-66675512	None:intergenic	30.0%
	CCTAAAAAGATCTACTCAAA+TGG	-	Chr8:66675460-66675479	None:intergenic	30.0%
	CTTGTGACATTTGTTCAAAA+GGG	+	Chr8:66675346-66675365	MsG0880045936.01.T01:CDS	30.0%
	GGCAAATTATTAGTGAAAGA+AGG	+	Chr8:66675608-66675627	MsG0880045936.01.T01:CDS	30.0%
	TAGGGAGAAAGAATTTGAAA+AGG	+	Chr8:66675717-66675736	MsG0880045936.01.T01:CDS	30.0%
	TCTTGTGACATTTGTTCAAA+AGG	+	Chr8:66675345-66675364	MsG0880045936.01.T01:CDS	30.0%
!	CCATTTGAGTAGATCTTTTT+AGG	+	Chr8:66675457-66675476	MsG0880045936.01.T01:intron	30.0%
!	TCTTTTGTGATAAGATCCAA+AGG	-	Chr8:66675574-66675593	None:intergenic	30.0%
!	TTTTTCCTTGTTACAACCTT+TGG	+	Chr8:66675555-66675574	MsG0880045936.01.T01:CDS	30.0%
	AAGATCCAAAGGTTGTAACA+AGG	-	Chr8:66675563-66675582	None:intergenic	35.0%
	AAGTAAGACTGACAAAGAAG+TGG	+	Chr8:66675780-66675799	MsG0880045936.01.T01:CDS	35.0%
	AATCAGGAATGGAAAAACAG+AGG	-	Chr8:66675417-66675436	None:intergenic	35.0%
	ACAAGGAAAAATCTTCATCC+AGG	-	Chr8:66675546-66675565	None:intergenic	35.0%
	AGACAAGGAAAGACATCATA+GGG	+	Chr8:66675699-66675718	MsG0880045936.01.T01:CDS	35.0%
	CAAAAGATGTGCATGAACTT+AGG	+	Chr8:66675587-66675606	MsG0880045936.01.T01:CDS	35.0%
!	ACACATTCGGCTTATACTTT+TGG	+	Chr8:66675265-66675284	MsG0880045936.01.T01:CDS	35.0%
!	TTTTAGGCTTTCATATCCCT+AGG	+	Chr8:66675473-66675492	MsG0880045936.01.T01:intron	35.0%
	ATTAGCAAATGCCCCATTGA+TGG	+	Chr8:66675301-66675320	MsG0880045936.01.T01:CDS	40.0%
	GAGACAAGGAAAGACATCAT+AGG	+	Chr8:66675698-66675717	MsG0880045936.01.T01:CDS	40.0%
	GGTACCAAGTTTCCATCAAT+GGG	-	Chr8:66675316-66675335	None:intergenic	40.0%
	GTACCAAGTTTCCATCAATG+GGG	-	Chr8:66675315-66675334	None:intergenic	40.0%
	AGCATGAAGTGAAGACTGAC+AGG	+	Chr8:66675830-66675849	MsG0880045936.01.T01:CDS	45.0%
	AGTGGTCAGAGATCAAGACA+AGG	+	Chr8:66675798-66675817	MsG0880045936.01.T01:CDS	45.0%
	ATGCCCCATTGATGGAAACT+TGG	+	Chr8:66675309-66675328	MsG0880045936.01.T01:CDS	45.0%
	CGGTACCAAGTTTCCATCAA+TGG	-	Chr8:66675317-66675336	None:intergenic	45.0%
	GAAGTGAATGGAACAGTTCG+AGG	+	Chr8:66675892-66675911	MsG0880045936.01.T01:CDS	45.0%
	GCATGAAGTGAAGACTGACA+GGG	+	Chr8:66675831-66675850	MsG0880045936.01.T01:CDS	45.0%
	TACCGCAGGTTTCACACATT+CGG	+	Chr8:66675252-66675271	MsG0880045936.01.T01:CDS	45.0%
	TTGTGTTACATCACTACCGC+AGG	+	Chr8:66675238-66675257	MsG0880045936.01.T01:CDS	45.0%
!!	ACAAATGTCACAAGAGCACC+TGG	-	Chr8:66675340-66675359	None:intergenic	45.0%
	AGCCGAATGTGTGAAACCTG+CGG	-	Chr8:66675257-66675276	None:intergenic	50.0%
	AGTGAAGACTGACAGGGAAG+TGG	+	Chr8:66675837-66675856	MsG0880045936.01.T01:CDS	50.0%
!	AAGGAGCATGAAGCTGAACG+CGG	+	Chr8:66675667-66675686	MsG0880045936.01.T01:CDS	50.0%
!	GGGACTGCAGTACTTTGAGA+TGG	+	Chr8:66675366-66675385	MsG0880045936.01.T01:CDS	50.0%
!!	AATGTCACAAGAGCACCTGG+CGG	-	Chr8:66675337-66675356	None:intergenic	50.0%
	CATCCAGGTCTGCATCACAC+TGG	-	Chr8:66675531-66675550	None:intergenic	55.0%
	GATGGAAACTTGGTACCGCC+AGG	+	Chr8:66675319-66675338	MsG0880045936.01.T01:CDS	55.0%
	ACGCGGACGAGCAAGAGACA+AGG	+	Chr8:66675684-66675703	MsG0880045936.01.T01:CDS	60.0%
	CAGGTCTGCATCACACTGGC+AGG	-	Chr8:66675527-66675546	None:intergenic	60.0%
	CTGCCAGTGTGATGCAGACC+TGG	+	Chr8:66675525-66675544	MsG0880045936.01.T01:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	66675238	66676014	66675238	ID=MsG0880045936.01;Name=MsG0880045936.01
Chr8	mRNA	66675238	66676014	66675238	ID=MsG0880045936.01.T01;Parent=MsG0880045936.01;Name=MsG0880045936.01.T01;_AED=0.48;_eAED=0.56;_QI=0\|1\|0\|1\|1\|1\|2\|0\|216
Chr8	exon	66675238	66675405	66675238	ID=MsG0880045936.01.T01:exon:25298;Parent=MsG0880045936.01.T01
Chr8	exon	66675532	66676014	66675532	ID=MsG0880045936.01.T01:exon:25299;Parent=MsG0880045936.01.T01
Chr8	CDS	66675238	66675405	66675238	ID=MsG0880045936.01.T01:cds;Parent=MsG0880045936.01.T01
Chr8	CDS	66675532	66676014	66675532	ID=MsG0880045936.01.T01:cds;Parent=MsG0880045936.01.T01

Gene Sequence

>MsG0880045936.01.T01

TTGTGTTACATCACTACCGCAGGTTTCACACATTCGGCTTATACTTTTGGTAATGAAGCTTCTATTAGCAAATGCCCCATTGATGGAAACTTGGTACCGCCAGGTGCTCTTGTGACATTTGTTCAAAAGGGACTGCAGTACTTTGAGATGGAAGCCAATTTGAATAATTGTGATGCAGACCTGGATGAAGATTTTTCCTTGTTACAACCTTTGGATCTTATCACAAAAGATGTGCATGAACTTAGGCAAATTATTAGTGAAAGAAGGAAAAAACTACATAAGGAGAGAAGTAAAGAATTAGAAAAGGAGCATGAAGCTGAACGCGGACGAGCAAGAGACAAGGAAAGACATCATAGGGAGAAAGAATTTGAAAAGGATAGGGTAAAAATTGCTAAAGAGCGTGAGCAGCAGCATGTAAGTAAGACTGACAAAGAAGTGGTCAGAGATCAAGACAAGGTTACTGCAAAGCATGAAGTGAAGACTGACAGGGAAGTGGTCAGAGATCAAGACAAGGTCACTGTAAAACATGAAGTGAATGGAACAGTTCGAGGTAATATGCCGTTTGTGAAAATAGTTTACATTACGTATATCACATATGTTCTTTGTATTGTGTTTTGTGTTCAGCTGCATTTTCTAATCAGTAATCTGTGA

Protein sequence

>MsG0880045936.01.T01

LCYITTAGFTHSAYTFGNEASISKCPIDGNLVPPGALVTFVQKGLQYFEMEANLNNCDADLDEDFSLLQPLDLITKDVHELRQIISERRKKLHKERSKELEKEHEAERGRARDKERHHREKEFEKDRVKIAKEREQQHVSKTDKEVVRDQDKVTAKHEVKTDREVVRDQDKVTVKHEVNGTVRGNMPFVKIVYITYITYVLCIVFCVQLHFLISNL*