AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017858.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017858.01.T01 MTR_3g113970 99.333 450 2 1 1 449 1 450 0.0 936
MsG0380017858.01.T01 MTR_2g031310 94.907 432 20 1 1 432 1 430 0.0 839
MsG0380017858.01.T01 MTR_7g089120 93.750 432 25 1 1 432 1 430 0.0 833
MsG0380017858.01.T01 MTR_4g094535 93.981 432 24 1 1 432 1 430 0.0 832
MsG0380017858.01.T01 MTR_1g101130 93.287 432 27 1 1 432 1 430 0.0 831
MsG0380017858.01.T01 MTR_4g019110 92.593 432 30 1 1 432 1 430 0.0 827
MsG0380017858.01.T01 MTR_4g017630 93.056 432 28 1 1 432 1 430 0.0 825
MsG0380017858.01.T01 MTR_4g019090 92.361 432 31 1 1 432 1 430 0.0 824
MsG0380017858.01.T01 MTR_8g098360 92.558 430 30 1 1 430 1 428 0.0 820
MsG0380017858.01.T01 MTR_8g107250 89.640 444 40 3 1 441 1 441 0.0 817
MsG0380017858.01.T01 MTR_8g085980 40.553 434 250 1 1 426 1 434 1.32e-124 369
MsG0380017858.01.T01 MTR_1g106005 40.611 458 244 4 1 447 1 441 1.03e-122 365
MsG0380017858.01.T01 MTR_3g110720 40.220 455 244 4 1 444 1 438 1.62e-122 364
MsG0380017858.01.T01 MTR_4g097830 40.220 455 244 4 1 444 1 438 3.73e-122 363
MsG0380017858.01.T01 MTR_7g085800 39.159 452 253 2 1 444 1 438 4.78e-122 363
MsG0380017858.01.T01 MTR_6g029190 39.955 448 259 3 1 438 1 448 6.02e-122 363
MsG0380017858.01.T01 MTR_2g041670 36.947 452 268 4 1 440 1 447 3.46e-100 308
MsG0380017858.01.T01 MTR_7g117050 35.498 462 267 10 2 444 3 452 1.54e-96 298
MsG0380017858.01.T01 MTR_2g041400 36.682 428 258 3 1 420 1 423 1.61e-96 296
MsG0380017858.01.T01 MTR_3g063410 32.432 148 92 1 258 397 30 177 2.01e-27 108
MsG0380017858.01.T01 MTR_3g063410 30.370 135 86 1 271 397 4 138 2.28e-20 87.8
MsG0380017858.01.T01 MTR_4g093670 82.759 29 5 0 379 407 1 29 8.63e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017858.01.T01 AT1G75780 94.676 432 22 1 1 432 1 431 0.0 840
MsG0380017858.01.T01 AT1G20010 94.213 432 24 1 1 432 1 431 0.0 836
MsG0380017858.01.T01 AT5G12250 93.287 432 27 1 1 432 1 430 0.0 832
MsG0380017858.01.T01 AT5G23860 93.519 432 26 1 1 432 1 430 0.0 831
MsG0380017858.01.T01 AT5G23860 93.519 432 26 1 1 432 1 430 0.0 831
MsG0380017858.01.T01 AT5G62700 93.287 432 27 1 1 432 1 430 0.0 828
MsG0380017858.01.T01 AT5G62690 93.287 432 27 1 1 432 1 430 0.0 828
MsG0380017858.01.T01 AT2G29550 93.072 433 28 1 1 433 1 431 0.0 825
MsG0380017858.01.T01 AT5G44340 92.361 432 31 1 1 432 1 430 0.0 820
MsG0380017858.01.T01 AT4G20890 93.023 430 28 1 1 430 1 428 0.0 819
MsG0380017858.01.T01 AT1G64740 40.092 434 252 1 1 426 1 434 2.52e-124 369
MsG0380017858.01.T01 AT5G19780 40.323 434 251 1 1 426 1 434 4.99e-124 368
MsG0380017858.01.T01 AT5G19770 40.323 434 251 1 1 426 1 434 4.99e-124 368
MsG0380017858.01.T01 AT1G04820 40.732 437 245 3 1 426 1 434 3.54e-122 363
MsG0380017858.01.T01 AT1G50010 40.732 437 245 3 1 426 1 434 3.54e-122 363
MsG0380017858.01.T01 AT4G14960 40.503 437 246 3 1 426 1 434 2.66e-121 361
MsG0380017858.01.T01 AT4G14960 40.360 389 218 3 1 378 1 386 6.81e-102 311
MsG0380017858.01.T01 AT5G05620 35.065 462 269 10 2 444 3 452 1.17e-95 296
MsG0380017858.01.T01 AT3G61650 34.979 466 272 10 2 448 3 456 2.05e-95 295

Find 160 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGATGAAGAATGAGATTT+AGG 0.135702 3:+101530127 None:intergenic
GGGACAGATAGATTTATTTA+TGG 0.176111 3:+101530225 None:intergenic
CCCAGAATTTGGATCCAATT+TGG 0.211203 3:+101530059 None:intergenic
AATCTGGTGCTGGTAATAAT+TGG 0.217101 3:-101529814 MsG0380017858.01.T01:CDS
ACCAAATTGGATCCAAATTC+TGG 0.227415 3:-101530060 MsG0380017858.01.T01:CDS
GCATATCACCTCCCAGAATT+TGG 0.235569 3:+101530048 None:intergenic
TATTACACTTCAAATGAAAT+TGG 0.243042 3:+101526914 None:intergenic
GATTTAGGGTTTGGTGTGTT+TGG 0.246640 3:+101530142 None:intergenic
CTTGGAGGAGGCACGGGTTC+TGG 0.250950 3:-101528066 MsG0380017858.01.T01:CDS
ATTTAGGGTTTGGTGTGTTT+GGG 0.257151 3:+101530143 None:intergenic
CACATTTGTTGAGTCAGTTC+CGG 0.265997 3:+101527528 None:intergenic
CTTCAATTCAGGAGATGTTT+AGG 0.278983 3:-101527272 MsG0380017858.01.T01:CDS
GAATACATTCATAGCTTTAT+AGG 0.282507 3:+101526820 None:intergenic
TGGGAACTCAACTTCAATTC+AGG 0.292593 3:-101527283 MsG0380017858.01.T01:CDS
ACATGTTGTCTGAGGTTTCC+TGG 0.293676 3:-101527678 MsG0380017858.01.T01:CDS
TGTATAGTAATAAAACCATT+AGG 0.296035 3:+101527017 None:intergenic
CGTCCTGATAATTTCGTGTT+TGG 0.301654 3:-101529839 MsG0380017858.01.T01:CDS
TGTTCCTAGAGCAGTTCTTA+TGG 0.307963 3:-101529918 MsG0380017858.01.T01:CDS
GGCCAATGCGGTAACCAAAT+TGG 0.311892 3:-101530073 MsG0380017858.01.T01:CDS
GGACGACATCTTCAAATTCT+TGG 0.312961 3:+101527314 None:intergenic
ACATTTGTTGAGTCAGTTCC+GGG 0.324818 3:+101527529 None:intergenic
GAAGAATGAGATTTAGGGTT+TGG 0.343322 3:+101530133 None:intergenic
AGCAGCACACATCATATTCT+TGG 0.353564 3:+101527500 None:intergenic
AAGATGAAGAATGAGATTTA+GGG 0.355346 3:+101530128 None:intergenic
GATTTGTTCATCAACCTCTT+TGG 0.362636 3:+101527419 None:intergenic
CTATTGCATCCTGGTATTGT+TGG 0.375777 3:+101527121 None:intergenic
ATTCTTCATACTTTGTTGAA+TGG 0.376461 3:-101527377 MsG0380017858.01.T01:CDS
CTCTATTGATATCAAAGATT+AGG 0.378228 3:-101528035 MsG0380017858.01.T01:CDS
CCCAGTATACCAATGCAAAA+AGG 0.378377 3:+101527209 None:intergenic
CACTTTATGACATTTGCTTC+AGG 0.383936 3:-101527864 MsG0380017858.01.T01:CDS
ACACTAGACTTCACATTGTT+GGG 0.386553 3:+101527351 None:intergenic
CACACTAGACTTCACATTGT+TGG 0.390184 3:+101527350 None:intergenic
CTATCGGGGTAATGCCCTAA+TGG 0.391267 3:-101527032 MsG0380017858.01.T01:three_prime_UTR
TGTCCAAACACGAAATTATC+AGG 0.392526 3:+101529836 None:intergenic
TCTATTGATATCAAAGATTA+GGG 0.396270 3:-101528034 MsG0380017858.01.T01:CDS
CAAGTTTGCCACTCCCTTGG+AGG 0.398051 3:-101528081 MsG0380017858.01.T01:CDS
AAGAATAAAAGAAAAGCTTA+TGG 0.400250 3:+101526963 None:intergenic
AGAGAGTAACATGAATGATT+TGG 0.405537 3:-101527154 MsG0380017858.01.T01:CDS
CACTCCCTTGGAGGAGGCAC+GGG 0.410186 3:-101528072 MsG0380017858.01.T01:CDS
TTTCAAGTTTGCCACTCCCT+TGG 0.411514 3:-101528084 MsG0380017858.01.T01:CDS
AGCAGTTTACTGCAATGTTC+CGG 0.413290 3:-101527239 MsG0380017858.01.T01:CDS
ATGGAAAGAGAGGGAAATGC+GGG 0.413953 3:+101530244 None:intergenic
GGTAATAATGGAGGGGCGAG+AGG 0.417124 3:+101530276 None:intergenic
ACAGATAGTGTAGCATTATA+TGG 0.417861 3:+101527937 None:intergenic
AATTTCGTGTTTGGACAATC+TGG 0.419616 3:-101529830 MsG0380017858.01.T01:CDS
GACGACATCTTCAAATTCTT+GGG 0.419923 3:+101527315 None:intergenic
AGTCAAGTATCGGCCATGTC+GGG 0.423301 3:+101527473 None:intergenic
GTATAGTAATAAAACCATTA+GGG 0.428564 3:+101527018 None:intergenic
AGAGAGATCTTGCACGTTCA+AGG 0.432109 3:-101530097 MsG0380017858.01.T01:CDS
GTGTATTACAATGAAGCTTC+TGG 0.433261 3:-101529950 MsG0380017858.01.T01:CDS
ATCTGGTGCTGGTAATAATT+GGG 0.444114 3:-101529813 MsG0380017858.01.T01:CDS
ACAACTGTGTCAGATACCTT+TGG 0.444799 3:+101527964 None:intergenic
GGAGGCACGGGTTCTGGCAT+GGG 0.445967 3:-101528060 MsG0380017858.01.T01:CDS
AGATTTATTTATGGAAAGAG+AGG 0.446051 3:+101530234 None:intergenic
CTGAATGCGTCCTGTCAGAC+AGG 0.447758 3:-101526865 MsG0380017858.01.T01:three_prime_UTR
GTCAATCAACTCAGCACCTT+CGG 0.448375 3:+101529775 None:intergenic
ACCTTCGGTATAATGACCTT+TGG 0.450279 3:+101529790 None:intergenic
GTCAATTGAACTCTGATCTC+AGG 0.457782 3:-101527656 MsG0380017858.01.T01:CDS
TTGGTATACTGGGGAGGGAA+TGG 0.459874 3:-101527199 MsG0380017858.01.T01:CDS
AGTATCAGATCTGGTCCGTT+TGG 0.467213 3:-101529872 MsG0380017858.01.T01:CDS
CCACTCCCTTGGAGGAGGCA+CGG 0.467869 3:-101528073 MsG0380017858.01.T01:CDS
ATCCAATTTGGTTACCGCAT+TGG 0.468483 3:+101530071 None:intergenic
CCTCCTCAGCTATTGCATCC+TGG 0.470174 3:+101527112 None:intergenic
AAAGTAAGCATCATTCTGTC+TGG 0.471664 3:+101528003 None:intergenic
CCAAATTGGATCCAAATTCT+GGG 0.472580 3:-101530059 MsG0380017858.01.T01:CDS
AGAAGGTGAGGAACATTATG+AGG 0.473711 3:-101527073 MsG0380017858.01.T01:CDS
GAGTCAGTTCCGGGACAGTA+AGG 0.474292 3:+101527538 None:intergenic
AGGTGGAAATGATACTCAAT+TGG 0.476330 3:-101529984 MsG0380017858.01.T01:CDS
AGGAGGCACGGGTTCTGGCA+TGG 0.476981 3:-101528061 MsG0380017858.01.T01:CDS
TACACTATCTGTCCACCAAC+TGG 0.477941 3:-101527926 MsG0380017858.01.T01:CDS
TGATTTCTGCAACTATGAGC+GGG 0.478950 3:-101527704 MsG0380017858.01.T01:CDS
ACATTATGAGGAGCAGTAGC+TGG 0.483996 3:-101527061 MsG0380017858.01.T01:exon
GGTTAATATGGTAATAATGG+AGG 0.488429 3:+101530267 None:intergenic
CTGATACTTTCCATGGTACC+AGG 0.490414 3:+101529887 None:intergenic
GAGAATTGTGATTGCTTGCA+AGG 0.495773 3:-101529722 MsG0380017858.01.T01:intron
TTTGCACCTCTCACTTCTCG+TGG 0.496790 3:-101527579 MsG0380017858.01.T01:CDS
GAACACGGCATTGATCCAAC+TGG 0.497409 3:-101530022 MsG0380017858.01.T01:CDS
AGTTGAGTTCCCAATAAAAG+TGG 0.497826 3:+101527293 None:intergenic
GAAGATGATTATGAAGAAGA+AGG 0.502318 3:-101527090 MsG0380017858.01.T01:CDS
AAAAGTGAAGACGAGGGAAT+GGG 0.507198 3:+101527613 None:intergenic
AGTAGCTGGATCAAACTATC+GGG 0.507378 3:-101527047 MsG0380017858.01.T01:exon
GTGTCAGATACCTTTGGAGA+TGG 0.509553 3:+101527970 None:intergenic
CAGTAGCTGGATCAAACTAT+CGG 0.516295 3:-101527048 MsG0380017858.01.T01:exon
TTGCATTGGTATACTGGGGA+GGG 0.517335 3:-101527204 MsG0380017858.01.T01:CDS
CCGTGCCTCCTCCAAGGGAG+TGG 0.517493 3:+101528073 None:intergenic
TTTGGGGAAATGAAATGAAA+TGG 0.518610 3:+101530160 None:intergenic
ATAGAATAACCCTGTCTGAC+AGG 0.525232 3:+101526855 None:intergenic
GTGTTTGGACAATCTGGTGC+TGG 0.529479 3:-101529824 MsG0380017858.01.T01:CDS
TGGGGAGGGAATGGATGAGA+TGG 0.529822 3:-101527190 MsG0380017858.01.T01:CDS
GTTTGCCACTCCCTTGGAGG+AGG 0.531497 3:-101528078 MsG0380017858.01.T01:CDS
GTAATAATGGAGGGGCGAGA+GGG 0.531878 3:+101530277 None:intergenic
ACCATGGAAAGTATCAGATC+TGG 0.532094 3:-101529881 MsG0380017858.01.T01:CDS
GGAAAATATGTAAGCGAAGG+TGG 0.533206 3:-101530001 MsG0380017858.01.T01:CDS
GAACTCTGATCTCAGGAAGC+TGG 0.535008 3:-101527649 MsG0380017858.01.T01:CDS
TGTCAGATACCTTTGGAGAT+GGG 0.536713 3:+101527971 None:intergenic
TTTAGGGTTTGGTGTGTTTG+GGG 0.538731 3:+101530144 None:intergenic
TATCTGTCCCTCTCTTCGAT+TGG 0.540481 3:-101530212 MsG0380017858.01.T01:five_prime_UTR
CAATTCAGGAGATGTTTAGG+AGG 0.541715 3:-101527269 MsG0380017858.01.T01:CDS
CAGAACCCGTGCCTCCTCCA+AGG 0.541892 3:+101528067 None:intergenic
CAGTCAAGTATCGGCCATGT+CGG 0.542390 3:+101527472 None:intergenic
AGATCCATAAGAACTGCTCT+AGG 0.542823 3:+101529914 None:intergenic
GGATCTTGAACCTGGTACCA+TGG 0.545394 3:-101529897 MsG0380017858.01.T01:CDS
AGAGGTGATACTTACAGCTA+GGG 0.546469 3:+101527824 None:intergenic
AATGGATGAGATGGAGTTCA+CGG 0.548252 3:-101527181 MsG0380017858.01.T01:CDS
TATGGAAAGAGAGGGAAATG+CGG 0.552645 3:+101530243 None:intergenic
GTATGTATCCCTTACTGTCC+CGG 0.555378 3:-101527547 MsG0380017858.01.T01:CDS
TTGCACCTCTCACTTCTCGT+GGG 0.556219 3:-101527578 MsG0380017858.01.T01:CDS
AGAAAATGCAGATGAGTGTA+TGG 0.557071 3:-101527902 MsG0380017858.01.T01:CDS
CGGAACTGACTCAACAAATG+TGG 0.558969 3:-101527527 MsG0380017858.01.T01:CDS
TTGCAGATGCAGTCAAGTAT+CGG 0.563760 3:+101527463 None:intergenic
GTTAATATGGTAATAATGGA+GGG 0.563897 3:+101530268 None:intergenic
GTTCTTATGGATCTTGAACC+TGG 0.565674 3:-101529905 MsG0380017858.01.T01:CDS
GACATCTTCAAATTCTTGGG+TGG 0.565762 3:+101527318 None:intergenic
ACATCTTCAAATTCTTGGGT+GGG 0.570008 3:+101527319 None:intergenic
TTTGCATTGGTATACTGGGG+AGG 0.575042 3:-101527205 MsG0380017858.01.T01:CDS
CCAGGATGCAATAGCTGAGG+AGG 0.575079 3:-101527112 MsG0380017858.01.T01:CDS
TGATTATGAAGAAGAAGGTG+AGG 0.578671 3:-101527085 MsG0380017858.01.T01:CDS
ACCAGATCTGATACTTTCCA+TGG 0.579539 3:+101529880 None:intergenic
GCTGGTAATAATTGGGCCAA+AGG 0.579903 3:-101529806 MsG0380017858.01.T01:CDS
AGAACCCGTGCCTCCTCCAA+GGG 0.582447 3:+101528068 None:intergenic
GATTTATTTATGGAAAGAGA+GGG 0.584606 3:+101530235 None:intergenic
AGATCAGAGTTCAATTGACC+AGG 0.587313 3:+101527660 None:intergenic
ACTGCATCTGCAATGTTCAG+AGG 0.592344 3:-101527453 MsG0380017858.01.T01:CDS
AGCGGTTCCAATCGAAGAGA+GGG 0.594080 3:+101530205 None:intergenic
AATTCAGGAGATGTTTAGGA+GGG 0.594241 3:-101527268 MsG0380017858.01.T01:CDS
AACAAATGAAATGAAACGAA+CGG 0.594543 3:-101530327 MsG0380017858.01.T01:five_prime_UTR
GCTGTAGTAGATACACAGAT+AGG 0.595672 3:+101526985 None:intergenic
GTCAAGTATCGGCCATGTCG+GGG 0.598025 3:+101527474 None:intergenic
CTGATTTCTGCAACTATGAG+CGG 0.598763 3:-101527705 MsG0380017858.01.T01:CDS
AGCAGAGTACCAACAATACC+AGG 0.600651 3:-101527130 MsG0380017858.01.T01:CDS
GCGGGGTTACATGTTGTCTG+AGG 0.600876 3:-101527686 MsG0380017858.01.T01:CDS
AGTCAGTTCCGGGACAGTAA+GGG 0.601789 3:+101527539 None:intergenic
GAAATGATACTCAATTGGAA+AGG 0.601847 3:-101529979 MsG0380017858.01.T01:CDS
GGACGAAAGATCTTACCAAA+CGG 0.603254 3:+101529857 None:intergenic
GGAACTGACTCAACAAATGT+GGG 0.606867 3:-101527526 MsG0380017858.01.T01:CDS
ACAATGAAGCTTCTGGTGGT+AGG 0.609506 3:-101529943 MsG0380017858.01.T01:CDS
GCCAAAGGTCATTATACCGA+AGG 0.611568 3:-101529791 MsG0380017858.01.T01:CDS
TCATAGTTGCAGAAATCAGA+TGG 0.613887 3:+101527709 None:intergenic
AACAAAAGAATATGATTGAG+CGG 0.615012 3:+101530187 None:intergenic
GAGCGGTTCCAATCGAAGAG+AGG 0.617083 3:+101530204 None:intergenic
CACGTTCAAGGTGGCCAATG+CGG 0.629178 3:-101530085 MsG0380017858.01.T01:CDS
ACTGGAAAATATGTAAGCGA+AGG 0.632683 3:-101530004 MsG0380017858.01.T01:CDS
CAAAGACAAAGCGAATAGGT+AGG 0.633490 3:+101526768 None:intergenic
TGTGCTGCTGATCCCCGACA+TGG 0.635297 3:-101527486 MsG0380017858.01.T01:CDS
TGGAAAGAGAGGGAAATGCG+GGG 0.638492 3:+101530245 None:intergenic
AGGAAAGATGAGCACCAAAG+AGG 0.640000 3:-101527433 MsG0380017858.01.T01:CDS
TTAATATGGTAATAATGGAG+GGG 0.642215 3:+101530269 None:intergenic
TGAGACCCACGAGAAGTGAG+AGG 0.646294 3:+101527573 None:intergenic
TGAATGCGTCCTGTCAGACA+GGG 0.651862 3:-101526864 MsG0380017858.01.T01:three_prime_UTR
ATTGATATCAAAGATTAGGG+AGG 0.653042 3:-101528031 MsG0380017858.01.T01:CDS
GATTTCTGCAACTATGAGCG+GGG 0.659247 3:-101527703 MsG0380017858.01.T01:CDS
GGAAAGAGAGGGAAATGCGG+GGG 0.664393 3:+101530246 None:intergenic
ATACCAGGATGCAATAGCTG+AGG 0.682886 3:-101527115 MsG0380017858.01.T01:CDS
GAGGTGATACTTACAGCTAG+GGG 0.687744 3:+101527825 None:intergenic
GTAGCTGGATCAAACTATCG+GGG 0.708017 3:-101527046 MsG0380017858.01.T01:exon
GAGGTGATATGCGATGAACA+CGG 0.708035 3:-101530037 MsG0380017858.01.T01:CDS
GAGATCTTGCACGTTCAAGG+TGG 0.713098 3:-101530094 MsG0380017858.01.T01:CDS
TATTACAATGAAGCTTCTGG+TGG 0.730410 3:-101529947 MsG0380017858.01.T01:CDS
AATTGGATCCAAATTCTGGG+AGG 0.748217 3:-101530056 MsG0380017858.01.T01:CDS
GGATGAGATGGAGTTCACGG+AGG 0.764427 3:-101527178 MsG0380017858.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTATTTATAAAAT+AGG - Chr3:101528101-101528120 MsG0380017858.01.T01:intron 0.0%
!!! AGAAAAATAATAACTTTTTT+TGG + Chr3:101528204-101528223 None:intergenic 10.0%
!!! AGAACTAATTTTTATAAAAA+TGG - Chr3:101528375-101528394 MsG0380017858.01.T01:intron 10.0%
!!! CATAAAATCTATTTTTTTAA+AGG - Chr3:101528478-101528497 MsG0380017858.01.T01:intron 10.0%
!!! TTTATAAAAATGGTTTTTTA+TGG - Chr3:101528385-101528404 MsG0380017858.01.T01:intron 10.0%
!! AGCAATTATAAAAAAAGTAA+AGG + Chr3:101528517-101528536 None:intergenic 15.0%
!!! AATAATGATGGTATATTTTA+GGG - Chr3:101527784-101527803 MsG0380017858.01.T01:intron 15.0%
!!! TAATAATGATGGTATATTTT+AGG - Chr3:101527783-101527802 MsG0380017858.01.T01:intron 15.0%
!! AAGAATAAAAGAAAAGCTTA+TGG + Chr3:101530149-101530168 None:intergenic 20.0%
!! CATTTAATAAATGATGTATG+TGG - Chr3:101527884-101527903 MsG0380017858.01.T01:CDS 20.0%
!! CTACCAAAAAAAAAAAATCA+TGG - Chr3:101528607-101528626 MsG0380017858.01.T01:intron 20.0%
!! GTATAGTAATAAAACCATTA+GGG + Chr3:101530094-101530113 None:intergenic 20.0%
!! TATTACACTTCAAATGAAAT+TGG + Chr3:101530198-101530217 None:intergenic 20.0%
!! TCTATTGATATCAAAGATTA+GGG - Chr3:101529075-101529094 MsG0380017858.01.T01:intron 20.0%
!! TGTATAGTAATAAAACCATT+AGG + Chr3:101530095-101530114 None:intergenic 20.0%
!!! AAATTTCATTCAATTTTGTC+AGG - Chr3:101529001-101529020 MsG0380017858.01.T01:intron 20.0%
!!! GAGAAAAGCTAATAATTTTA+AGG + Chr3:101528308-101528327 None:intergenic 20.0%
!!! TAAGCAAATTTTGACTTTTT+TGG + Chr3:101527948-101527967 None:intergenic 20.0%
! AACAAAAGAATATGATTGAG+CGG + Chr3:101526925-101526944 None:intergenic 25.0%
! AAGATGAAGAATGAGATTTA+GGG + Chr3:101526984-101527003 None:intergenic 25.0%
! AATTCCAATGTTTGTCAAAA+TGG + Chr3:101528665-101528684 None:intergenic 25.0%
! AGATTTATTTATGGAAAGAG+AGG + Chr3:101526878-101526897 None:intergenic 25.0%
! ATGCACTACTATAAAAGATA+AGG + Chr3:101528076-101528095 None:intergenic 25.0%
! ATTCTTCATACTTTGTTGAA+TGG - Chr3:101529732-101529751 MsG0380017858.01.T01:CDS 25.0%
! CATTATTACACAAAAAGTCA+CGG + Chr3:101527771-101527790 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG + Chr3:101527923-101527942 None:intergenic 25.0%
! CTCTATTGATATCAAAGATT+AGG - Chr3:101529074-101529093 MsG0380017858.01.T01:intron 25.0%
! GAAAAAAATCTGAATCAAAC+GGG + Chr3:101528182-101528201 None:intergenic 25.0%
! GATTTATTTATGGAAAGAGA+GGG + Chr3:101526877-101526896 None:intergenic 25.0%
! GGAAAAAAATCTGAATCAAA+CGG + Chr3:101528183-101528202 None:intergenic 25.0%
! TCATTCTGAGTACAAAATAT+AGG + Chr3:101527743-101527762 None:intergenic 25.0%
! TCATTTCTAAGTGTTTGTTT+AGG - Chr3:101528242-101528261 MsG0380017858.01.T01:intron 25.0%
! TGATCTTTATGTTAGATTTG+TGG - Chr3:101528942-101528961 MsG0380017858.01.T01:intron 25.0%
! TGCCAAAAGAAAAATAATAC+CGG + Chr3:101528584-101528603 None:intergenic 25.0%
! TTAAATAAAACATACCGACA+TGG - Chr3:101528145-101528164 MsG0380017858.01.T01:intron 25.0%
! TTGATATGTCAGATATGATA+CGG - Chr3:101527808-101527827 MsG0380017858.01.T01:intron 25.0%
! TTTGTAATATGTCACAGAAT+TGG - Chr3:101528884-101528903 MsG0380017858.01.T01:intron 25.0%
!! AATTTGCTTATAATAGAGAC+CGG + Chr3:101527849-101527868 None:intergenic 25.0%
!! AATTTGCTTATAATAGTGAC+CGG - Chr3:101527958-101527977 MsG0380017858.01.T01:CDS 25.0%
!! AGAGGATCTAATTCAATTTT+TGG - Chr3:101527646-101527665 MsG0380017858.01.T01:CDS 25.0%
!! GACTTTTTGTGTAATAATGA+TGG - Chr3:101527772-101527791 MsG0380017858.01.T01:intron 25.0%
!! GAGGATCTAATTCAATTTTT+GGG - Chr3:101527647-101527666 MsG0380017858.01.T01:CDS 25.0%
!! GTTAATATGGTAATAATGGA+GGG + Chr3:101526844-101526863 None:intergenic 25.0%
!! TTAATATGGTAATAATGGAG+GGG + Chr3:101526843-101526862 None:intergenic 25.0%
!!! GAATACATTCATAGCTTTAT+AGG + Chr3:101530292-101530311 None:intergenic 25.0%
!!! GTGCCATGATTTTTTTTTTT+TGG + Chr3:101528613-101528632 None:intergenic 25.0%
!!! TTTTAAGAAAGTAGACTGAA+GGG - Chr3:101528767-101528786 MsG0380017858.01.T01:intron 25.0%
!!! TTTTTAAGAAAGTAGACTGA+AGG - Chr3:101528766-101528785 MsG0380017858.01.T01:intron 25.0%
ACAGATAGTGTAGCATTATA+TGG + Chr3:101529175-101529194 None:intergenic 30.0%
AGACAACCTTTGATTAATTG+AGG + Chr3:101529323-101529342 None:intergenic 30.0%
AGAGAGTAACATGAATGATT+TGG - Chr3:101529955-101529974 MsG0380017858.01.T01:CDS 30.0%
ATTGATATCAAAGATTAGGG+AGG - Chr3:101529078-101529097 MsG0380017858.01.T01:intron 30.0%
CACTACTATAAAAGATAAGG+TGG + Chr3:101528073-101528092 None:intergenic 30.0%
CAGAGGTTAATGATACATAA+AGG - Chr3:101527559-101527578 MsG0380017858.01.T01:CDS 30.0%
CTCAATTGTGATTAATGTCT+TGG - Chr3:101527435-101527454 MsG0380017858.01.T01:CDS 30.0%
GAAATGATACTCAATTGGAA+AGG - Chr3:101527130-101527149 MsG0380017858.01.T01:CDS 30.0%
GAAGATGAAGAATGAGATTT+AGG + Chr3:101526985-101527004 None:intergenic 30.0%
GAAGATGATTATGAAGAAGA+AGG - Chr3:101530019-101530038 MsG0380017858.01.T01:CDS 30.0%
GGGACAGATAGATTTATTTA+TGG + Chr3:101526887-101526906 None:intergenic 30.0%
GGTTAATATGGTAATAATGG+AGG + Chr3:101526845-101526864 None:intergenic 30.0%
TCAGTACCTCAATTAATCAA+AGG - Chr3:101529314-101529333 MsG0380017858.01.T01:intron 30.0%
TTTGGGGAAATGAAATGAAA+TGG + Chr3:101526952-101526971 None:intergenic 30.0%
! GAAACATGATGATGATTGAA+AGG - Chr3:101528034-101528053 MsG0380017858.01.T01:CDS 30.0%
!! GACCGGTATTATTTTTCTTT+TGG - Chr3:101528579-101528598 MsG0380017858.01.T01:intron 30.0%
AAAGTAAGCATCATTCTGTC+TGG + Chr3:101529109-101529128 None:intergenic 35.0%
AACTGGGCAAACAATAGAAT+GGG - Chr3:101528834-101528853 MsG0380017858.01.T01:intron 35.0%
AATCGTCACGATTTCAATCA+TGG + Chr3:101527539-101527558 None:intergenic 35.0%
AATTCAGGAGATGTTTAGGA+GGG - Chr3:101529841-101529860 MsG0380017858.01.T01:CDS 35.0%
AATTTCGTGTTTGGACAATC+TGG - Chr3:101527279-101527298 MsG0380017858.01.T01:CDS 35.0%
ACACTAGACTTCACATTGTT+GGG + Chr3:101529761-101529780 None:intergenic 35.0%
ACATCTTCAAATTCTTGGGT+GGG + Chr3:101529793-101529812 None:intergenic 35.0%
ACCAAATTGGATCCAAATTC+TGG - Chr3:101527049-101527068 MsG0380017858.01.T01:exon 35.0%
ACCATAAAAAAGTGAAGACG+AGG + Chr3:101529506-101529525 None:intergenic 35.0%
ACTGGAAAATATGTAAGCGA+AGG - Chr3:101527105-101527124 MsG0380017858.01.T01:CDS 35.0%
AGAAAATGCAGATGAGTGTA+TGG - Chr3:101529207-101529226 MsG0380017858.01.T01:intron 35.0%
AGGTGGAAATGATACTCAAT+TGG - Chr3:101527125-101527144 MsG0380017858.01.T01:CDS 35.0%
AGTTGAGTTCCCAATAAAAG+TGG + Chr3:101529819-101529838 None:intergenic 35.0%
ATACCGACATGGAGTATATA+GGG - Chr3:101528156-101528175 MsG0380017858.01.T01:intron 35.0%
ATTCTATTGTTTGCCCAGTT+AGG + Chr3:101528834-101528853 None:intergenic 35.0%
ATTGCTTGTAGTCACTGAAA+TGG - Chr3:101528531-101528550 MsG0380017858.01.T01:intron 35.0%
CAATTACTATACTGTACTGC+AGG + Chr3:101527592-101527611 None:intergenic 35.0%
CACTTTATGACATTTGCTTC+AGG - Chr3:101529245-101529264 MsG0380017858.01.T01:intron 35.0%
CCAAATTGGATCCAAATTCT+GGG - Chr3:101527050-101527069 MsG0380017858.01.T01:exon 35.0%
CCAATGTTTGTCAAAATGGT+TGG + Chr3:101528661-101528680 None:intergenic 35.0%
CCATAAAAAAGTGAAGACGA+GGG + Chr3:101529505-101529524 None:intergenic 35.0%
CTCATTGTGTAATTGCAGTT+GGG - Chr3:101529369-101529388 MsG0380017858.01.T01:intron 35.0%
CTTCAATTCAGGAGATGTTT+AGG - Chr3:101529837-101529856 MsG0380017858.01.T01:CDS 35.0%
GAAAAATAATACCGGTCTGT+CGG + Chr3:101528576-101528595 None:intergenic 35.0%
GACGACATCTTCAAATTCTT+GGG + Chr3:101529797-101529816 None:intergenic 35.0%
GGGGGTTAATATGGTAATAA+TGG + Chr3:101526848-101526867 None:intergenic 35.0%
GTGTATTACAATGAAGCTTC+TGG - Chr3:101527159-101527178 MsG0380017858.01.T01:CDS 35.0%
TAACTGGGCAAACAATAGAA+TGG - Chr3:101528833-101528852 MsG0380017858.01.T01:intron 35.0%
TATTACAATGAAGCTTCTGG+TGG - Chr3:101527162-101527181 MsG0380017858.01.T01:CDS 35.0%
TCATAGTTGCAGAAATCAGA+TGG + Chr3:101529403-101529422 None:intergenic 35.0%
TCATTGTGTAATTGCAGTTG+GGG - Chr3:101529370-101529389 MsG0380017858.01.T01:intron 35.0%
TGATTATGAAGAAGAAGGTG+AGG - Chr3:101530024-101530043 MsG0380017858.01.T01:CDS 35.0%
TGTCCAAACACGAAATTATC+AGG + Chr3:101527276-101527295 None:intergenic 35.0%
TTCTATTGTTTGCCCAGTTA+GGG + Chr3:101528833-101528852 None:intergenic 35.0%
TTGCTTGTAGTCACTGAAAT+GGG - Chr3:101528532-101528551 MsG0380017858.01.T01:intron 35.0%
! GAAGAATGAGATTTAGGGTT+TGG + Chr3:101526979-101526998 None:intergenic 35.0%
! GATTTGTTCATCAACCTCTT+TGG + Chr3:101529693-101529712 None:intergenic 35.0%
! TCACTAATTTTTACTCCCTC+CGG + Chr3:101527980-101527999 None:intergenic 35.0%
! TCGCTTACATATTTTCCAGT+TGG + Chr3:101527105-101527124 None:intergenic 35.0%
!! AAGATGTCGTCCACTTTTAT+TGG - Chr3:101529806-101529825 MsG0380017858.01.T01:CDS 35.0%
!! AATCTGGTGCTGGTAATAAT+TGG - Chr3:101527295-101527314 MsG0380017858.01.T01:CDS 35.0%
!! AGATGTCGTCCACTTTTATT+GGG - Chr3:101529807-101529826 MsG0380017858.01.T01:CDS 35.0%
!! ATCTGGTGCTGGTAATAATT+GGG - Chr3:101527296-101527315 MsG0380017858.01.T01:CDS 35.0%
!! ATTTAGGGTTTGGTGTGTTT+GGG + Chr3:101526969-101526988 None:intergenic 35.0%
!! CCAACCATTTTGACAAACAT+TGG - Chr3:101528658-101528677 MsG0380017858.01.T01:intron 35.0%
!! CCTTTTTGCATTGGTATACT+GGG - Chr3:101529900-101529919 MsG0380017858.01.T01:CDS 35.0%
!! CTTTTTGCATTGGTATACTG+GGG - Chr3:101529901-101529920 MsG0380017858.01.T01:CDS 35.0%
!! TTGAGGTACTGAAAAAGAAG+AGG + Chr3:101529306-101529325 None:intergenic 35.0%
!!! CGTCTTCACTTTTTTATGGT+TGG - Chr3:101529506-101529525 MsG0380017858.01.T01:intron 35.0%
AAAAAGTGAAGACGAGGGAA+TGG + Chr3:101529500-101529519 None:intergenic 40.0%
AAAAGTGAAGACGAGGGAAT+GGG + Chr3:101529499-101529518 None:intergenic 40.0%
AAGAGGTGATACTTACAGCT+AGG + Chr3:101529289-101529308 None:intergenic 40.0%
AATGGATGAGATGGAGTTCA+CGG - Chr3:101529928-101529947 MsG0380017858.01.T01:CDS 40.0%
AATTGGATCCAAATTCTGGG+AGG - Chr3:101527053-101527072 MsG0380017858.01.T01:exon 40.0%
ACAACTGTGTCAGATACCTT+TGG + Chr3:101529148-101529167 None:intergenic 40.0%
ACCAGATCTGATACTTTCCA+TGG + Chr3:101527232-101527251 None:intergenic 40.0%
ACCTTCGGTATAATGACCTT+TGG + Chr3:101527322-101527341 None:intergenic 40.0%
ACGGAAATAAATACTCCCTC+CGG - Chr3:101527827-101527846 MsG0380017858.01.T01:intron 40.0%
ACTGGGCAAACAATAGAATG+GGG - Chr3:101528835-101528854 MsG0380017858.01.T01:intron 40.0%
AGAAGGTGAGGAACATTATG+AGG - Chr3:101530036-101530055 MsG0380017858.01.T01:CDS 40.0%
AGAGGTGATACTTACAGCTA+GGG + Chr3:101529288-101529307 None:intergenic 40.0%
AGATCAGAGTTCAATTGACC+AGG + Chr3:101529452-101529471 None:intergenic 40.0%
AGATCCATAAGAACTGCTCT+AGG + Chr3:101527198-101527217 None:intergenic 40.0%
AGCAGCACACATCATATTCT+TGG + Chr3:101529612-101529631 None:intergenic 40.0%
AGCAGTTTACTGCAATGTTC+CGG - Chr3:101529870-101529889 MsG0380017858.01.T01:CDS 40.0%
AGTAGCTGGATCAAACTATC+GGG - Chr3:101530062-101530081 MsG0380017858.01.T01:CDS 40.0%
ATAGAATAACCCTGTCTGAC+AGG + Chr3:101530257-101530276 None:intergenic 40.0%
ATCCAATTTGGTTACCGCAT+TGG + Chr3:101527041-101527060 None:intergenic 40.0%
ATGATCAAGGTTCCCTAACT+GGG - Chr3:101528818-101528837 MsG0380017858.01.T01:intron 40.0%
CAATTCAGGAGATGTTTAGG+AGG - Chr3:101529840-101529859 MsG0380017858.01.T01:CDS 40.0%
CACACTAGACTTCACATTGT+TGG + Chr3:101529762-101529781 None:intergenic 40.0%
CAGTAGCTGGATCAAACTAT+CGG - Chr3:101530061-101530080 MsG0380017858.01.T01:CDS 40.0%
CATACCGACATGGAGTATAT+AGG - Chr3:101528155-101528174 MsG0380017858.01.T01:intron 40.0%
CCAACTGCAATTACACAATG+AGG + Chr3:101529371-101529390 None:intergenic 40.0%
CCCAGAATTTGGATCCAATT+TGG + Chr3:101527053-101527072 None:intergenic 40.0%
CCCAGTATACCAATGCAAAA+AGG + Chr3:101529903-101529922 None:intergenic 40.0%
CCTCATTGTGTAATTGCAGT+TGG - Chr3:101529368-101529387 MsG0380017858.01.T01:intron 40.0%
CCTGACTTTCTGTAGATCTT+GGG - Chr3:101528012-101528031 MsG0380017858.01.T01:CDS 40.0%
CGTCCTGATAATTTCGTGTT+TGG - Chr3:101527270-101527289 MsG0380017858.01.T01:CDS 40.0%
CTATTGCATCCTGGTATTGT+TGG + Chr3:101529991-101530010 None:intergenic 40.0%
CTGATTTCTGCAACTATGAG+CGG - Chr3:101529404-101529423 MsG0380017858.01.T01:intron 40.0%
GACATCTTCAAATTCTTGGG+TGG + Chr3:101529794-101529813 None:intergenic 40.0%
GAGAATTGTGATTGCTTGCA+AGG - Chr3:101527387-101527406 MsG0380017858.01.T01:CDS 40.0%
GCTGTAGTAGATACACAGAT+AGG + Chr3:101530127-101530146 None:intergenic 40.0%
GGAAAATATGTAAGCGAAGG+TGG - Chr3:101527108-101527127 MsG0380017858.01.T01:CDS 40.0%
GGACGAAAGATCTTACCAAA+CGG + Chr3:101527255-101527274 None:intergenic 40.0%
GGACGACATCTTCAAATTCT+TGG + Chr3:101529798-101529817 None:intergenic 40.0%
GTCAATTGAACTCTGATCTC+AGG - Chr3:101529453-101529472 MsG0380017858.01.T01:intron 40.0%
GTTACACAGAGCTATGATCA+AGG - Chr3:101528805-101528824 MsG0380017858.01.T01:intron 40.0%
GTTCTTATGGATCTTGAACC+TGG - Chr3:101527204-101527223 MsG0380017858.01.T01:CDS 40.0%
TATGATCAAGGTTCCCTAAC+TGG - Chr3:101528817-101528836 MsG0380017858.01.T01:intron 40.0%
TATGGAAAGAGAGGGAAATG+CGG + Chr3:101526869-101526888 None:intergenic 40.0%
TCCTGACTTTCTGTAGATCT+TGG - Chr3:101528011-101528030 MsG0380017858.01.T01:CDS 40.0%
TGATTTCTGCAACTATGAGC+GGG - Chr3:101529405-101529424 MsG0380017858.01.T01:intron 40.0%
TGCTTATAATAGAGACCGGA+GGG + Chr3:101527845-101527864 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG - Chr3:101527962-101527981 MsG0380017858.01.T01:CDS 40.0%
TGGGAACTCAACTTCAATTC+AGG - Chr3:101529826-101529845 MsG0380017858.01.T01:CDS 40.0%
TGTTCCTAGAGCAGTTCTTA+TGG - Chr3:101527191-101527210 MsG0380017858.01.T01:CDS 40.0%
TTGAAATCGTGACGATTCAG+AGG - Chr3:101527542-101527561 MsG0380017858.01.T01:CDS 40.0%
TTGCAGATGCAGTCAAGTAT+CGG + Chr3:101529649-101529668 None:intergenic 40.0%
TTGCTTATAATAGAGACCGG+AGG + Chr3:101527846-101527865 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - Chr3:101527961-101527980 MsG0380017858.01.T01:CDS 40.0%
! ACATTTGTTGAGTCAGTTCC+GGG + Chr3:101529583-101529602 None:intergenic 40.0%
! ATGATGATTGAAAGGCATGC+AGG - Chr3:101528042-101528061 MsG0380017858.01.T01:CDS 40.0%
! CACATTTGTTGAGTCAGTTC+CGG + Chr3:101529584-101529603 None:intergenic 40.0%
! CATCTGCATTTTCTACCAGT+TGG + Chr3:101529201-101529220 None:intergenic 40.0%
! GGAACTGACTCAACAAATGT+GGG - Chr3:101529583-101529602 MsG0380017858.01.T01:intron 40.0%
! GTGCACTCTGAAAATTCTAG+AGG - Chr3:101527628-101527647 MsG0380017858.01.T01:CDS 40.0%
! TGTCAGATACCTTTGGAGAT+GGG + Chr3:101529141-101529160 None:intergenic 40.0%
!! ACCATGGAAAGTATCAGATC+TGG - Chr3:101527228-101527247 MsG0380017858.01.T01:CDS 40.0%
!! GATTTAGGGTTTGGTGTGTT+TGG + Chr3:101526970-101526989 None:intergenic 40.0%
!! GCCTTTTTGCATTGGTATAC+TGG - Chr3:101529899-101529918 MsG0380017858.01.T01:CDS 40.0%
!! TTTAGGGTTTGGTGTGTTTG+GGG + Chr3:101526968-101526987 None:intergenic 40.0%
!!! CCCTCGTCTTCACTTTTTTA+TGG - Chr3:101529502-101529521 MsG0380017858.01.T01:intron 40.0%
AAATAATACCGGTCTGTCGG+TGG + Chr3:101528573-101528592 None:intergenic 45.0%
AATGCAAAAAGGCTTTGCGC+CGG + Chr3:101529892-101529911 None:intergenic 45.0%
ACAATGAAGCTTCTGGTGGT+AGG - Chr3:101527166-101527185 MsG0380017858.01.T01:CDS 45.0%
ACATTATGAGGAGCAGTAGC+TGG - Chr3:101530048-101530067 MsG0380017858.01.T01:CDS 45.0%
ACTGCATCTGCAATGTTCAG+AGG - Chr3:101529656-101529675 MsG0380017858.01.T01:intron 45.0%
AGAGAGATCTTGCACGTTCA+AGG - Chr3:101527012-101527031 MsG0380017858.01.T01:three_prime_UTR 45.0%
AGGAAAGATGAGCACCAAAG+AGG - Chr3:101529676-101529695 MsG0380017858.01.T01:intron 45.0%
AGTATCAGATCTGGTCCGTT+TGG - Chr3:101527237-101527256 MsG0380017858.01.T01:CDS 45.0%
ATACCAGGATGCAATAGCTG+AGG - Chr3:101529994-101530013 MsG0380017858.01.T01:CDS 45.0%
ATGGAAAGAGAGGGAAATGC+GGG + Chr3:101526868-101526887 None:intergenic 45.0%
CCCAAGATCTACAGAAAGTC+AGG + Chr3:101528015-101528034 None:intergenic 45.0%
CTGATACTTTCCATGGTACC+AGG + Chr3:101527225-101527244 None:intergenic 45.0%
CTGTCGGTGGTTGTAATCAT+AGG + Chr3:101528560-101528579 None:intergenic 45.0%
GAGGTGATACTTACAGCTAG+GGG + Chr3:101529287-101529306 None:intergenic 45.0%
GAGGTGATATGCGATGAACA+CGG - Chr3:101527072-101527091 MsG0380017858.01.T01:CDS 45.0%
GATTTCTGCAACTATGAGCG+GGG - Chr3:101529406-101529425 MsG0380017858.01.T01:intron 45.0%
GCATATCACCTCCCAGAATT+TGG + Chr3:101527064-101527083 None:intergenic 45.0%
GCCAAAGGTCATTATACCGA+AGG - Chr3:101527318-101527337 MsG0380017858.01.T01:CDS 45.0%
GCTGGTAATAATTGGGCCAA+AGG - Chr3:101527303-101527322 MsG0380017858.01.T01:CDS 45.0%
GTAGCTGGATCAAACTATCG+GGG - Chr3:101530063-101530082 MsG0380017858.01.T01:CDS 45.0%
GTATGTATCCCTTACTGTCC+CGG - Chr3:101529562-101529581 MsG0380017858.01.T01:intron 45.0%
GTCAATCAACTCAGCACCTT+CGG + Chr3:101527337-101527356 None:intergenic 45.0%
TACACTATCTGTCCACCAAC+TGG - Chr3:101529183-101529202 MsG0380017858.01.T01:intron 45.0%
TATCTGTCCCTCTCTTCGAT+TGG - Chr3:101526897-101526916 MsG0380017858.01.T01:three_prime_UTR 45.0%
! ACATGTTGTCTGAGGTTTCC+TGG - Chr3:101529431-101529450 MsG0380017858.01.T01:intron 45.0%
! AGCAGAGTACCAACAATACC+AGG - Chr3:101529979-101529998 MsG0380017858.01.T01:CDS 45.0%
! ATGATTGAAAGGCATGCAGG+AGG - Chr3:101528045-101528064 MsG0380017858.01.T01:CDS 45.0%
! CGGAACTGACTCAACAAATG+TGG - Chr3:101529582-101529601 MsG0380017858.01.T01:intron 45.0%
! CTCTGTTTTCCCATCTCCAA+AGG - Chr3:101529129-101529148 MsG0380017858.01.T01:intron 45.0%
! CTGCATTTTCTACCAGTTGG+TGG + Chr3:101529198-101529217 None:intergenic 45.0%
! GTGTCAGATACCTTTGGAGA+TGG + Chr3:101529142-101529161 None:intergenic 45.0%
! TGATTGAAAGGCATGCAGGA+GGG - Chr3:101528046-101528065 MsG0380017858.01.T01:CDS 45.0%
! TTGCATTGGTATACTGGGGA+GGG - Chr3:101529905-101529924 MsG0380017858.01.T01:CDS 45.0%
! TTTGCATTGGTATACTGGGG+AGG - Chr3:101529904-101529923 MsG0380017858.01.T01:CDS 45.0%
!! TTTCAAGTTTGCCACTCCCT+TGG - Chr3:101529025-101529044 MsG0380017858.01.T01:intron 45.0%
AGCGGTTCCAATCGAAGAGA+GGG + Chr3:101526907-101526926 None:intergenic 50.0%
AGTCAGTTCCGGGACAGTAA+GGG + Chr3:101529573-101529592 None:intergenic 50.0%
CTATCGGGGTAATGCCCTAA+TGG - Chr3:101530077-101530096 MsG0380017858.01.T01:CDS 50.0%
GAACTCTGATCTCAGGAAGC+TGG - Chr3:101529460-101529479 MsG0380017858.01.T01:intron 50.0%
GAGATCTTGCACGTTCAAGG+TGG - Chr3:101527015-101527034 MsG0380017858.01.T01:three_prime_UTR 50.0%
GATTACAACCACCGACAGAC+CGG - Chr3:101528562-101528581 MsG0380017858.01.T01:intron 50.0%
GGATCTTGAACCTGGTACCA+TGG - Chr3:101527212-101527231 MsG0380017858.01.T01:CDS 50.0%
GGCCAATGCGGTAACCAAAT+TGG - Chr3:101527036-101527055 MsG0380017858.01.T01:three_prime_UTR 50.0%
GGGAAATGCGGGGGTTAATA+TGG + Chr3:101526857-101526876 None:intergenic 50.0%
GGGCCCTATATACTCCATGT+CGG + Chr3:101528162-101528181 None:intergenic 50.0%
GTGTTTGGACAATCTGGTGC+TGG - Chr3:101527285-101527304 MsG0380017858.01.T01:CDS 50.0%
TGAATGCGTCCTGTCAGACA+GGG - Chr3:101530245-101530264 MsG0380017858.01.T01:five_prime_UTR 50.0%
TGGAAAGAGAGGGAAATGCG+GGG + Chr3:101526867-101526886 None:intergenic 50.0%
TTGCACCTCTCACTTCTCGT+GGG - Chr3:101529531-101529550 MsG0380017858.01.T01:intron 50.0%
TTGGTATACTGGGGAGGGAA+TGG - Chr3:101529910-101529929 MsG0380017858.01.T01:CDS 50.0%
TTTGCACCTCTCACTTCTCG+TGG - Chr3:101529530-101529549 MsG0380017858.01.T01:intron 50.0%
! GGCGCAAAGCCTTTTTGCAT+TGG - Chr3:101529891-101529910 MsG0380017858.01.T01:CDS 50.0%
! GTAATAATGGAGGGGCGAGA+GGG + Chr3:101526835-101526854 None:intergenic 50.0%
!! AGTCAAGTATCGGCCATGTC+GGG + Chr3:101529639-101529658 None:intergenic 50.0%
!! CAGTCAAGTATCGGCCATGT+CGG + Chr3:101529640-101529659 None:intergenic 50.0%
!! GAACACGGCATTGATCCAAC+TGG - Chr3:101527087-101527106 MsG0380017858.01.T01:CDS 50.0%
CAAGTTTGCCACTCCCTTGG+AGG - Chr3:101529028-101529047 MsG0380017858.01.T01:intron 55.0%
CACGTTCAAGGTGGCCAATG+CGG - Chr3:101527024-101527043 MsG0380017858.01.T01:three_prime_UTR 55.0%
CCAGGATGCAATAGCTGAGG+AGG - Chr3:101529997-101530016 MsG0380017858.01.T01:CDS 55.0%
CCTCCTCAGCTATTGCATCC+TGG + Chr3:101530000-101530019 None:intergenic 55.0%
CTGAATGCGTCCTGTCAGAC+AGG - Chr3:101530244-101530263 MsG0380017858.01.T01:five_prime_UTR 55.0%
GAGCGGTTCCAATCGAAGAG+AGG + Chr3:101526908-101526927 None:intergenic 55.0%
GAGTCAGTTCCGGGACAGTA+AGG + Chr3:101529574-101529593 None:intergenic 55.0%
GCGGGGTTACATGTTGTCTG+AGG - Chr3:101529423-101529442 MsG0380017858.01.T01:intron 55.0%
GGAAAGAGAGGGAAATGCGG+GGG + Chr3:101526866-101526885 None:intergenic 55.0%
GGATGAGATGGAGTTCACGG+AGG - Chr3:101529931-101529950 MsG0380017858.01.T01:CDS 55.0%
TGAGACCCACGAGAAGTGAG+AGG + Chr3:101529539-101529558 None:intergenic 55.0%
TGGGGAGGGAATGGATGAGA+TGG - Chr3:101529919-101529938 MsG0380017858.01.T01:CDS 55.0%
! GGTAATAATGGAGGGGCGAG+AGG + Chr3:101526836-101526855 None:intergenic 55.0%
!! GTCAAGTATCGGCCATGTCG+GGG + Chr3:101529638-101529657 None:intergenic 55.0%
AGAACCCGTGCCTCCTCCAA+GGG + Chr3:101529044-101529063 None:intergenic 60.0%
GTTTGCCACTCCCTTGGAGG+AGG - Chr3:101529031-101529050 MsG0380017858.01.T01:intron 60.0%
! TGTGCTGCTGATCCCCGACA+TGG - Chr3:101529623-101529642 MsG0380017858.01.T01:intron 60.0%
CAGAACCCGTGCCTCCTCCA+AGG + Chr3:101529045-101529064 None:intergenic 65.0%
CCACTCCCTTGGAGGAGGCA+CGG - Chr3:101529036-101529055 MsG0380017858.01.T01:intron 65.0%
! AGGAGGCACGGGTTCTGGCA+TGG - Chr3:101529048-101529067 MsG0380017858.01.T01:intron 65.0%
! CACTCCCTTGGAGGAGGCAC+GGG - Chr3:101529037-101529056 MsG0380017858.01.T01:intron 65.0%
! CTTGGAGGAGGCACGGGTTC+TGG - Chr3:101529043-101529062 MsG0380017858.01.T01:intron 65.0%
! GGAGGCACGGGTTCTGGCAT+GGG - Chr3:101529049-101529068 MsG0380017858.01.T01:intron 65.0%
CCGTGCCTCCTCCAAGGGAG+TGG + Chr3:101529039-101529058 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 101526783 101530348 101526783 ID=MsG0380017858.01;Name=MsG0380017858.01
Chr3 mRNA 101526783 101530348 101526783 ID=MsG0380017858.01.T01;Parent=MsG0380017858.01;Name=MsG0380017858.01.T01;_AED=0.29;_eAED=0.29;_QI=226|1|1|1|1|1|3|282|449
Chr3 exon 101526783 101527744 101526783 ID=MsG0380017858.01.T01:exon:13142;Parent=MsG0380017858.01.T01
Chr3 exon 101527839 101528108 101527839 ID=MsG0380017858.01.T01:exon:13141;Parent=MsG0380017858.01.T01
Chr3 exon 101529723 101530348 101529723 ID=MsG0380017858.01.T01:exon:13140;Parent=MsG0380017858.01.T01
Chr3 five_prime_UTR 101530123 101530348 101530123 ID=MsG0380017858.01.T01:five_prime_utr;Parent=MsG0380017858.01.T01
Chr3 CDS 101529723 101530122 101529723 ID=MsG0380017858.01.T01:cds;Parent=MsG0380017858.01.T01
Chr3 CDS 101527839 101528108 101527839 ID=MsG0380017858.01.T01:cds;Parent=MsG0380017858.01.T01
Chr3 CDS 101527065 101527744 101527065 ID=MsG0380017858.01.T01:cds;Parent=MsG0380017858.01.T01
Chr3 three_prime_UTR 101526783 101527064 101526783 ID=MsG0380017858.01.T01:three_prime_utr;Parent=MsG0380017858.01.T01
Gene Sequence

>MsG0380017858.01.T01

ATGAGAGAGATCTTGCACGTTCAAGGTGGCCAATGCGGTAACCAAATTGGATCCAAATTCTGGGAGGTGATATGCGATGAACACGGCATTGATCCAACTGGAAAATATGTAAGCGAAGGTGGAAATGATACTCAATTGGAAAGGATCAATGTGTATTACAATGAAGCTTCTGGTGGTAGGTATGTTCCTAGAGCAGTTCTTATGGATCTTGAACCTGGTACCATGGAAAGTATCAGATCTGGTCCGTTTGGTAAGATCTTTCGTCCTGATAATTTCGTGTTTGGACAATCTGGTGCTGGTAATAATTGGGCCAAAGGTCATTATACCGAAGGTGCTGAGTTGATTGACTCTGTTCTTGATGTTGTTCGTAAAGAAGCAGAGAATTGTGATTGCTTGCAAGGTTTTCAAGTTTGCCACTCCCTTGGAGGAGGCACGGGTTCTGGCATGGGAACTCTATTGATATCAAAGATTAGGGAGGAATATCCAGACAGAATGATGCTTACTTTCTCTGTTTTCCCATCTCCAAAGGTATCTGACACAGTTGTTGAGCCATATAATGCTACACTATCTGTCCACCAACTGGTAGAAAATGCAGATGAGTGTATGGTTCTTGACAATGAAGCACTTTATGACATTTGCTTCAGGACATTAAAACTCAGCACCCCTAGCTTTGGGGATCTGAACCATCTGATTTCTGCAACTATGAGCGGGGTTACATGTTGTCTGAGGTTTCCTGGTCAATTGAACTCTGATCTCAGGAAGCTGGCTGTCAATCTGATCCCATTCCCTCGTCTTCACTTTTTTATGGTTGGATTTGCACCTCTCACTTCTCGTGGGTCTCAGCAGTATGTATCCCTTACTGTCCCGGAACTGACTCAACAAATGTGGGACGCCAAGAATATGATGTGTGCTGCTGATCCCCGACATGGCCGATACTTGACTGCATCTGCAATGTTCAGAGGAAAGATGAGCACCAAAGAGGTTGATGAACAAATCATCAATGTGCAGAACAAGAATTCTTCATACTTTGTTGAATGGATTCCCAACAATGTGAAGTCTAGTGTGTGCGATATCCCACCCAAGAATTTGAAGATGTCGTCCACTTTTATTGGGAACTCAACTTCAATTCAGGAGATGTTTAGGAGGGTCAGTGAGCAGTTTACTGCAATGTTCCGGCGCAAAGCCTTTTTGCATTGGTATACTGGGGAGGGAATGGATGAGATGGAGTTCACGGAGGCAGAGAGTAACATGAATGATTTGGTAGCAGAGTACCAACAATACCAGGATGCAATAGCTGAGGAGGAAGATGATTATGAAGAAGAAGGTGAGGAACATTATGAGGAGCAGTAG
Protein sequence

>MsG0380017858.01.T01

MREILHVQGGQCGNQIGSKFWEVICDEHGIDPTGKYVSEGGNDTQLERINVYYNEASGGRYVPRAVLMDLEPGTMESIRSGPFGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAIAEEEDDYEEEGEEHYEEQ*