AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017994.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017994.01.T01 MTR_3g116480 87.004 908 16 6 1 827 1 887 0.0 1551
MsG0380017994.01.T01 MTR_4g069920 78.328 909 91 8 1 827 1 885 0.0 1374
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017994.01.T01 AT4G34450 73.568 908 137 7 1 827 1 886 0.0 1317
MsG0380017994.01.T01 AT2G16200 55.556 63 27 1 766 827 21 83 9.18e-17 76.3
MsG0380017994.01.T01 AT2G16200 55.556 63 27 1 766 827 7 69 3.67e-16 74.3

Find 212 sgRNAs with CRISPR-Local

Find 643 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCCTGAGTAACATTCTT+AGG 0.185985 3:+102985474 MsG0380017994.01.T01:CDS
TTTGTCCCTTACTGCATTCT+TGG 0.197372 3:+102990218 MsG0380017994.01.T01:three_prime_UTR
TTCTTCTTCTTGTTATTCTC+TGG 0.225543 3:+102981211 MsG0380017994.01.T01:five_prime_UTR
ACAATACCCTAATCTTTCTT+TGG 0.235646 3:-102989026 None:intergenic
CTCCAAGTGTGTTTAGATAA+AGG 0.246814 3:-102986388 None:intergenic
GTGCTTGTGCGGTTGTCTTT+TGG 0.261791 3:+102989968 MsG0380017994.01.T01:CDS
AATACTGTCATCAACCTTCT+TGG 0.299187 3:+102987565 MsG0380017994.01.T01:CDS
TGCTGCAGTTGATGAGTTAA+AGG 0.303960 3:+102985873 MsG0380017994.01.T01:CDS
CAAGTGTATCAACCTTAAAA+AGG 0.314940 3:-102986770 None:intergenic
AATTTCATTGCAACATCCTT+TGG 0.320288 3:-102990001 None:intergenic
CAATACCCTAATCTTTCTTT+GGG 0.325104 3:-102989025 None:intergenic
ATCCCTGATGCAAAGGAAAC+AGG 0.331509 3:+102985560 MsG0380017994.01.T01:CDS
CTAATTGTCAGATTTCTTCA+TGG 0.335162 3:+102988992 MsG0380017994.01.T01:intron
GTGTGGCAATGCTTCTGTTC+TGG 0.335873 3:-102985172 None:intergenic
CAAATCCTGAAATTGTAAAA+AGG 0.336682 3:+102982734 MsG0380017994.01.T01:CDS
CACTAACTGCAACATTGATA+TGG 0.336809 3:+102985133 MsG0380017994.01.T01:CDS
CCCTTTCATGGGAATTGAAA+AGG 0.339316 3:+102981881 MsG0380017994.01.T01:CDS
AGTCTAAAGATATGGGATTA+AGG 0.341479 3:+102982259 MsG0380017994.01.T01:CDS
ATTCCAGAGTTTGCAAACTT+TGG 0.345897 3:+102986744 MsG0380017994.01.T01:CDS
GCTGTAAAGGACTTCCTGTT+TGG 0.348577 3:+102986440 MsG0380017994.01.T01:CDS
GCTGCTATACCTACTGAATC+AGG 0.351960 3:+102982092 MsG0380017994.01.T01:CDS
TTCCAGAGTTTGCAAACTTT+GGG 0.353146 3:+102986745 MsG0380017994.01.T01:CDS
AACCCTGTTTCCTTTGCATC+AGG 0.353442 3:-102985563 None:intergenic
AGCTGAGTATTCCCCTTTCA+TGG 0.357213 3:+102981869 MsG0380017994.01.T01:intron
TAATGAGATTGGATTTAATC+AGG 0.358670 3:+102990135 MsG0380017994.01.T01:three_prime_UTR
GGTTGGGATTTGACTTCCTT+GGG 0.363696 3:-102986618 None:intergenic
TAATTGCTGGATTTAATTCT+CGG 0.364724 3:-102984833 None:intergenic
TCCAAGTGTGTTTAGATAAA+GGG 0.365379 3:-102986387 None:intergenic
TCTTCTTCTTGTTATTCTCT+GGG 0.371148 3:+102981212 MsG0380017994.01.T01:five_prime_UTR
TTTCTTCTCTGCAAGTGGTT+GGG 0.373606 3:-102986634 None:intergenic
AAGGTGGAGCAATGAGGTTC+AGG 0.374504 3:+102982753 MsG0380017994.01.T01:CDS
TGATATCCCGCTTGTCAATC+TGG 0.376165 3:+102986469 MsG0380017994.01.T01:CDS
GCTTCGGCCAAGCTCTCCCT+TGG 0.377356 3:-102987538 None:intergenic
CTTTCTTCTCTGCAAGTGGT+TGG 0.377425 3:-102986635 None:intergenic
CCAAGTGTTGGCACTCCCTC+AGG 0.379387 3:-102987207 None:intergenic
AAGGCAGCACTTGCAACAAT+TGG 0.379505 3:-102982596 None:intergenic
AAACATGTGTGATCTTGAAT+TGG 0.382989 3:-102989915 None:intergenic
ACCATAGATACTACACTTCC+TGG 0.389860 3:+102985732 MsG0380017994.01.T01:intron
AAGTGTATTCCAATAGTTAT+AGG 0.393001 3:-102990276 None:intergenic
TCATCCACTCGCTCACAATC+AGG 0.394231 3:-102987502 None:intergenic
CATCACGGTAGCTGAATCTC+AGG 0.396731 3:-102981292 None:intergenic
GTAAAGAATTACAAACTATT+CGG 0.402145 3:+102990175 MsG0380017994.01.T01:three_prime_UTR
TGGTTGGGATTTGACTTCCT+TGG 0.403046 3:-102986619 None:intergenic
ACAGGCCCCAAAGAAAGATT+AGG 0.403700 3:+102989019 MsG0380017994.01.T01:CDS
AGCTGAAGAACAGTAATTGC+TGG 0.405937 3:-102984846 None:intergenic
TGATATGCATCAGCTGTTGA+TGG 0.408594 3:-102986705 None:intergenic
ACTCTCAAGAAAATCATAGA+AGG 0.412468 3:-102984736 None:intergenic
TCAGGAAATAATACACAGTC+AGG 0.414520 3:+102984705 MsG0380017994.01.T01:CDS
AATGGTGTATCTGATGATAA+AGG 0.416830 3:+102982284 MsG0380017994.01.T01:CDS
TTCCCAAAGTTTGCAAACTC+TGG 0.416924 3:-102986747 None:intergenic
CCTTTCATGGGAATTGAAAA+GGG 0.417082 3:+102981882 MsG0380017994.01.T01:CDS
TGGCTAGCGGATAATCTATC+AGG 0.417740 3:+102990074 MsG0380017994.01.T01:exon
CTGTAAAGGACTTCCTGTTT+GGG 0.418816 3:+102986441 MsG0380017994.01.T01:CDS
TTGTAGGTTATCTGTGAGTC+AGG 0.421092 3:+102984687 MsG0380017994.01.T01:intron
AATCTTTCTTTGGGGCCTGT+TGG 0.423928 3:-102989016 None:intergenic
AGATTTCTTCATGGTCCAAC+AGG 0.423978 3:+102989001 MsG0380017994.01.T01:intron
ATCTGTCCAGGTGAATCATA+TGG 0.426484 3:-102987165 None:intergenic
TTTGTTGTCGGTGTATTCAT+AGG 0.427510 3:+102989935 MsG0380017994.01.T01:CDS
TGCACTGGGTTTGCTGCACC+AGG 0.428277 3:+102982813 MsG0380017994.01.T01:CDS
TGTATTCATAGGAAATATAA+AGG 0.434356 3:+102989946 MsG0380017994.01.T01:CDS
AAAGAAAACTTCTGTGGCTT+CGG 0.436034 3:-102982217 None:intergenic
ACAGCAGCAAATCTTAAAAC+TGG 0.438071 3:-102984888 None:intergenic
ACATGTTCTAATAATTGCTC+TGG 0.438709 3:-102986990 None:intergenic
CTACACTTCCTGGGAATTGA+AGG 0.445284 3:+102985742 MsG0380017994.01.T01:CDS
AGATCACACATGTTTGTTGT+CGG 0.448330 3:+102989923 MsG0380017994.01.T01:CDS
TCGTGTTTGTGCAGTTGTAC+TGG 0.450538 3:-102986965 None:intergenic
CAGGCCCCAAAGAAAGATTA+GGG 0.452420 3:+102989020 MsG0380017994.01.T01:CDS
TTAATCCCATATCTTTAGAC+TGG 0.453175 3:-102982257 None:intergenic
GTGAGCACACTGGCAAAGTT+TGG 0.453513 3:+102985850 MsG0380017994.01.T01:CDS
TTAGGGTATTGTGGCTTACT+CGG 0.455561 3:+102989037 MsG0380017994.01.T01:CDS
AATGTTGGGCCTATAACTAT+TGG 0.461648 3:+102990267 MsG0380017994.01.T01:three_prime_UTR
TAGATGAATGCCACTGACTA+AGG 0.465517 3:-102982615 None:intergenic
ACAAAGGCTTACCTTGTTCA+AGG 0.466919 3:-102984916 None:intergenic
CTTCGGCCAAGCTCTCCCTT+GGG 0.468883 3:-102987537 None:intergenic
TTTCCTGAGTAACATTCTTA+GGG 0.469038 3:+102985475 MsG0380017994.01.T01:CDS
TGCAGTTAGTGACTGATGTT+GGG 0.469707 3:-102985121 None:intergenic
CCTGAGGGAGTGCCAACACT+TGG 0.469769 3:+102987207 MsG0380017994.01.T01:CDS
GGATATCAAATGGCCCAAAC+AGG 0.470482 3:-102986454 None:intergenic
AGAATTACAAACTATTCGGT+TGG 0.470731 3:+102990179 MsG0380017994.01.T01:three_prime_UTR
GATGACAGTATTTACAGCTT+CGG 0.472343 3:-102987554 None:intergenic
TGGTAGACTAGCAACGATAC+TGG 0.472490 3:+102990238 MsG0380017994.01.T01:three_prime_UTR
GAATTACAAACTATTCGGTT+GGG 0.472632 3:+102990180 MsG0380017994.01.T01:three_prime_UTR
TGGAAGAGACTTGAGAGGCT+TGG 0.479961 3:-102987145 None:intergenic
GATATGCATCAGCTGTTGAT+GGG 0.483197 3:-102986704 None:intergenic
ATGATCCACAATTAGATGCT+AGG 0.484554 3:+102981934 MsG0380017994.01.T01:CDS
TGTCACAAGCTCTCTTATGA+AGG 0.484923 3:+102982451 MsG0380017994.01.T01:CDS
ATGAAACGAATATATTTGCT+AGG 0.487145 3:-102985781 None:intergenic
TGTGAGCGAGTGGATGAGTA+TGG 0.487810 3:+102987508 MsG0380017994.01.T01:CDS
TGTTCAGGTTATCGTAATTG+TGG 0.491311 3:+102987086 MsG0380017994.01.T01:intron
GATGATGACCGCGACGATGA+AGG 0.496667 3:+102981336 MsG0380017994.01.T01:CDS
TCTTGGCCCAAGGGAGAGCT+TGG 0.497009 3:+102987531 MsG0380017994.01.T01:CDS
TCAGCTTCAGTGAGCTCCAC+AGG 0.501358 3:-102986888 None:intergenic
CAGTGGCATTCATCTACTAC+AGG 0.502394 3:+102982622 MsG0380017994.01.T01:CDS
CTAAACACACTTGGAGGTGA+TGG 0.503784 3:+102986395 MsG0380017994.01.T01:CDS
CCTACGTCACAAGTCAGAAA+TGG 0.504171 3:+102984761 MsG0380017994.01.T01:CDS
CGATACTGGAAGTATAATGT+TGG 0.504361 3:+102990252 MsG0380017994.01.T01:three_prime_UTR
GAGGCTTTCTTCTCTGCAAG+TGG 0.508958 3:-102986639 None:intergenic
TGAGACTGATAAAGCTGTAA+AGG 0.512160 3:+102986427 MsG0380017994.01.T01:CDS
CTTTATCTAAACACACTTGG+AGG 0.512500 3:+102986389 MsG0380017994.01.T01:CDS
GAATGAATGCACAACTCACT+CGG 0.514915 3:-102981254 None:intergenic
AGTAACATTCTTAGGGAAGA+AGG 0.515461 3:+102985482 MsG0380017994.01.T01:CDS
CGAGTGGATGAGTATGGTCT+TGG 0.517300 3:+102987514 MsG0380017994.01.T01:CDS
ATTGAGCTCTGTAATAGCTC+TGG 0.517722 3:-102984799 None:intergenic
CACAAGGCTGCAAGCCAAGA+AGG 0.517906 3:-102987579 None:intergenic
TTAGAAAATTTCCCAAGTGT+TGG 0.518435 3:-102987219 None:intergenic
TTTGTACAGTTTCATGCACT+GGG 0.519283 3:+102982799 MsG0380017994.01.T01:CDS
TTGACAAGCGGGATATCAAA+TGG 0.520695 3:-102986464 None:intergenic
TCTTGGCTTGCAGCCTTGTG+AGG 0.521858 3:+102987582 MsG0380017994.01.T01:CDS
AGATGCTAGGAGATGCTCAC+AGG 0.523187 3:+102981947 MsG0380017994.01.T01:CDS
TGCCAGTGTGCTCACAGCAC+CGG 0.525008 3:-102985842 None:intergenic
ACCCTTTATCTAAACACACT+TGG 0.526555 3:+102986386 MsG0380017994.01.T01:CDS
CAGGAATGCATGGGAAAGCA+TGG 0.529009 3:+102987477 MsG0380017994.01.T01:intron
CTTCCCTAAGAATGTTACTC+AGG 0.529688 3:-102985478 None:intergenic
GGGCGGTTCTTCAGGAAGCA+AGG 0.530156 3:+102981904 MsG0380017994.01.T01:CDS
TTGCAGTTAGTGACTGATGT+TGG 0.530937 3:-102985122 None:intergenic
AATACCGCTCAATTTGTGCC+AGG 0.533594 3:-102982547 None:intergenic
TCCCTGATGCAAAGGAAACA+GGG 0.533650 3:+102985561 MsG0380017994.01.T01:CDS
AAAGAAAGATTAGGGTATTG+TGG 0.535861 3:+102989028 MsG0380017994.01.T01:CDS
TATCTAATTTCAGGAATGCA+TGG 0.536835 3:+102987467 MsG0380017994.01.T01:intron
AGATATGGGATTAAGGAGAA+TGG 0.538106 3:+102982266 MsG0380017994.01.T01:CDS
GATACTGGAAGTATAATGTT+GGG 0.538272 3:+102990253 MsG0380017994.01.T01:three_prime_UTR
TAGGGTATTGTGGCTTACTC+GGG 0.539591 3:+102989038 MsG0380017994.01.T01:CDS
GCTAGCCACAATCTCATGAA+TGG 0.540300 3:-102990059 None:intergenic
TATCACAGACGGAACCCTCC+TGG 0.546089 3:+102982529 MsG0380017994.01.T01:CDS
ATCACTGACAGTTTCATCCT+CGG 0.547476 3:-102990035 None:intergenic
ATGAGTATGGTCTTGGCCCA+AGG 0.547932 3:+102987521 MsG0380017994.01.T01:CDS
TGAAACGAATATATTTGCTA+GGG 0.549359 3:-102985780 None:intergenic
TCATCATCTTTCTTCACGAG+TGG 0.549801 3:-102981321 None:intergenic
AAAGTTTGCAAACTCTGGAA+TGG 0.551843 3:-102986742 None:intergenic
TGCTGTTCGCACCTTGAACA+AGG 0.552650 3:+102984905 MsG0380017994.01.T01:CDS
TTACCAGTCCTCAGCGCCTG+TGG 0.552709 3:+102986872 MsG0380017994.01.T01:intron
ATGTCAAAAGCCTCTTCTGA+AGG 0.553531 3:-102986585 None:intergenic
AACATGTGTGATCTTGAATT+GGG 0.553828 3:-102989914 None:intergenic
GGCGGTTCTTCAGGAAGCAA+GGG 0.555669 3:+102981905 MsG0380017994.01.T01:CDS
ACCCTGTTTCCTTTGCATCA+GGG 0.556360 3:-102985562 None:intergenic
TAGTCTCCAGATTGACAAGC+GGG 0.559078 3:-102986475 None:intergenic
GCTGAGTATTCCCCTTTCAT+GGG 0.563911 3:+102981870 MsG0380017994.01.T01:intron
TAGAGAAATCCCTGATGCAA+AGG 0.564716 3:+102985553 MsG0380017994.01.T01:CDS
GAATAACAAGAAGAAGAAGA+AGG 0.566843 3:-102981206 None:intergenic
CACCACTGGCTTACCTCACA+AGG 0.566963 3:-102987595 None:intergenic
AGTCTACCAAGAATGCAGTA+AGG 0.567615 3:-102990224 None:intergenic
CATCCACTCGCTCACAATCA+GGG 0.568503 3:-102987501 None:intergenic
ATCTAATTTCAGGAATGCAT+GGG 0.569745 3:+102987468 MsG0380017994.01.T01:intron
CCGCTCAATTTGTGCCAGGA+GGG 0.571229 3:-102982543 None:intergenic
TGACATTGATTCTGTGCCCA+AGG 0.571264 3:+102986602 MsG0380017994.01.T01:CDS
CCATAGATACTACACTTCCT+GGG 0.571583 3:+102985733 MsG0380017994.01.T01:intron
CACGAGTGGTTGAGCCATCA+CGG 0.572119 3:-102981307 None:intergenic
TGAGTATGGTCTTGGCCCAA+GGG 0.575644 3:+102987522 MsG0380017994.01.T01:CDS
CTCTCAAGAAAATCATAGAA+GGG 0.578640 3:-102984735 None:intergenic
CTTGCAGAGAAGAAAGCCTC+TGG 0.580181 3:+102986642 MsG0380017994.01.T01:CDS
CATCTCCTAGCATCTAATTG+TGG 0.589567 3:-102981939 None:intergenic
GTTTGCAAACTCTGGAATGG+AGG 0.589800 3:-102986739 None:intergenic
AAGTGTAGTAATAGCAAGTG+TGG 0.589942 3:-102985189 None:intergenic
GACGACACAAACATTGGTCA+AGG 0.591081 3:-102990357 None:intergenic
ATTACAGGAACCTTCAGAAG+AGG 0.592069 3:+102986575 MsG0380017994.01.T01:intron
TCTGAAGTTTATTGTTCGAG+AGG 0.592844 3:+102987245 MsG0380017994.01.T01:CDS
GAGAATGCAACAGTGAGGGC+CGG 0.593593 3:+102985823 MsG0380017994.01.T01:CDS
CTGCTATACCTACTGAATCA+GGG 0.594281 3:+102982093 MsG0380017994.01.T01:CDS
CTGAGGGAGTGCCAACACTT+GGG 0.595169 3:+102987208 MsG0380017994.01.T01:CDS
TCTTGAGAATGCAACAGTGA+GGG 0.598523 3:+102985819 MsG0380017994.01.T01:CDS
GTCTACCAAGAATGCAGTAA+GGG 0.599744 3:-102990223 None:intergenic
GACAGGAAATGAATCAAGTG+TGG 0.601757 3:+102985217 MsG0380017994.01.T01:CDS
CTGAGATTCAGCTACCGTGA+TGG 0.604195 3:+102981293 MsG0380017994.01.T01:exon
AATGAATGCACAACTCACTC+GGG 0.605082 3:-102981253 None:intergenic
ACCGCTCAATTTGTGCCAGG+AGG 0.606317 3:-102982544 None:intergenic
AGAGCTATTACAGAGCTCAA+TGG 0.608497 3:+102984801 MsG0380017994.01.T01:CDS
CAAGTCACCTCGTCTGCAGA+GGG 0.609015 3:-102982315 None:intergenic
GGAGGAGCACCCAAACCAGT+TGG 0.609607 3:-102986672 None:intergenic
ACAAGTCACCTCGTCTGCAG+AGG 0.609964 3:-102982316 None:intergenic
TCTCTTCCATATGATTCACC+TGG 0.612987 3:+102987159 MsG0380017994.01.T01:CDS
AGGAATGCATGGGAAAGCAT+GGG 0.615686 3:+102987478 MsG0380017994.01.T01:intron
AAGTCTCTCCCTGATTCAGT+AGG 0.615879 3:-102982101 None:intergenic
GAAATATAAAGGTGCTTGTG+CGG 0.616618 3:+102989957 MsG0380017994.01.T01:CDS
GTGGCATTTGAGAAGCCTGA+GGG 0.617748 3:+102987192 MsG0380017994.01.T01:CDS
ACTGGTGAGGCTGAAGATGA+TGG 0.618692 3:+102987377 MsG0380017994.01.T01:CDS
ATATGCATCAGCTGTTGATG+GGG 0.619854 3:-102986703 None:intergenic
CTTTCATGGGAATTGAAAAG+GGG 0.620518 3:+102981883 MsG0380017994.01.T01:CDS
GATATCTCCCTCTGCAGACG+AGG 0.620675 3:+102982308 MsG0380017994.01.T01:CDS
AATACCCTAATCTTTCTTTG+GGG 0.621283 3:-102989024 None:intergenic
CAGGAAATAATACACAGTCA+GGG 0.625927 3:+102984706 MsG0380017994.01.T01:CDS
GATACGACACAGCACTCGAA+TGG 0.627712 3:-102982510 None:intergenic
AGGTTGACCGACCACTGGTG+AGG 0.628156 3:+102987364 MsG0380017994.01.T01:intron
GGTTTGGGTGCTCCTCCAAG+TGG 0.630511 3:+102986678 MsG0380017994.01.T01:CDS
AACATTCTTAGGGAAGAAGG+TGG 0.632595 3:+102985485 MsG0380017994.01.T01:CDS
GGGCCCTGATTGTGAGCGAG+TGG 0.633246 3:+102987498 MsG0380017994.01.T01:CDS
TGATGCCATTCATGAGATTG+TGG 0.633282 3:+102990054 MsG0380017994.01.T01:CDS
AGTGAGCTCCACAGGCGCTG+AGG 0.636968 3:-102986880 None:intergenic
CAAGAAAATCATAGAAGGGG+CGG 0.644100 3:-102984731 None:intergenic
CCCTCCTGGCACAAATTGAG+CGG 0.644481 3:+102982543 MsG0380017994.01.T01:CDS
TCATATGGAAGAGACTTGAG+AGG 0.644642 3:-102987150 None:intergenic
AGGAAATAATACACAGTCAG+GGG 0.645045 3:+102984707 MsG0380017994.01.T01:CDS
ATGTGTGATCTTGAATTGGG+TGG 0.645323 3:-102989911 None:intergenic
GCAAGTGCTGCCTTAGTCAG+TGG 0.646407 3:+102982605 MsG0380017994.01.T01:CDS
TGAATTGGGTGGAACAACCT+CGG 0.646733 3:-102989900 None:intergenic
TACACTTCCTGGGAATTGAA+GGG 0.647378 3:+102985743 MsG0380017994.01.T01:CDS
TCTCAAGAAAATCATAGAAG+GGG 0.647603 3:-102984734 None:intergenic
TCTTCAGCCTCACCAGTGGT+CGG 0.649342 3:-102987371 None:intergenic
CCATTTCTGACTTGTGACGT+AGG 0.654222 3:-102984761 None:intergenic
TGTGGCATTTGAGAAGCCTG+AGG 0.655854 3:+102987191 MsG0380017994.01.T01:CDS
GAAATTGACTGTCAGATCCG+AGG 0.656407 3:+102990018 MsG0380017994.01.T01:CDS
ATCATCTTCAGCCTCACCAG+TGG 0.659428 3:-102987375 None:intergenic
GGCCGGTGCTGTGAGCACAC+TGG 0.659994 3:+102985840 MsG0380017994.01.T01:CDS
GACAGCAAAGAAAACTTCTG+TGG 0.662155 3:-102982223 None:intergenic
GTGCTGTGTCGTATCACAGA+CGG 0.669972 3:+102982518 MsG0380017994.01.T01:CDS
ATCACGGTAGCTGAATCTCA+GGG 0.672400 3:-102981291 None:intergenic
TGTGGGCTGTGCAGGTACCG+AGG 0.677280 3:+102989883 MsG0380017994.01.T01:intron
ATCTTGAGAATGCAACAGTG+AGG 0.681270 3:+102985818 MsG0380017994.01.T01:CDS
CTAGTCTCCAGATTGACAAG+CGG 0.684081 3:-102986476 None:intergenic
ATTCATGAGATTGTGGCTAG+CGG 0.684649 3:+102990061 MsG0380017994.01.T01:CDS
TTTCATGGGAATTGAAAAGG+GGG 0.693546 3:+102981884 MsG0380017994.01.T01:CDS
GTTCACTTATCTGTCTACGC+AGG 0.694862 3:+102985619 MsG0380017994.01.T01:CDS
TATGCATCAGCTGTTGATGG+GGG 0.711908 3:-102986702 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTAAAATTTTAAAAATA+TGG + Chr3:102986238-102986257 MsG0380017994.01.T01:intron 0.0%
!! AAAAATATATACCATTATAA+AGG - Chr3:102988102-102988121 None:intergenic 10.0%
!! AATAAAATATATTTCACATT+AGG - Chr3:102983277-102983296 None:intergenic 10.0%
!! TTAAAATAAAAAATAACACA+AGG + Chr3:102988325-102988344 MsG0380017994.01.T01:intron 10.0%
!!! AAAAAAAAGATTAAATTTTG+CGG + Chr3:102988355-102988374 MsG0380017994.01.T01:intron 10.0%
!!! AAAATTTTAATAAATTGCAT+GGG - Chr3:102983194-102983213 None:intergenic 10.0%
!!! ATTAGTATAAATTCTAAAAA+GGG + Chr3:102984456-102984475 MsG0380017994.01.T01:intron 10.0%
!!! GAAATATATTTTAATTGTAT+TGG - Chr3:102989687-102989706 None:intergenic 10.0%
!!! GTAATTAGTTTAATAAAATA+TGG - Chr3:102987754-102987773 None:intergenic 10.0%
!!! GTGTTATTTTTTATTTTAAA+AGG - Chr3:102988324-102988343 None:intergenic 10.0%
!! ACATTAAATATCTTAAAGAA+GGG + Chr3:102983403-102983422 MsG0380017994.01.T01:intron 15.0%
!! CAAATATTATGAGAATATTT+AGG - Chr3:102985030-102985049 None:intergenic 15.0%
!! TAATAAAATATGGTTTATCA+TGG - Chr3:102987744-102987763 None:intergenic 15.0%
!! TACATTAAATATCTTAAAGA+AGG + Chr3:102983402-102983421 MsG0380017994.01.T01:intron 15.0%
!!! AAATTTTAATAAATTGCATG+GGG - Chr3:102983193-102983212 None:intergenic 15.0%
!!! AACCATTTTTCAATAAAAAA+AGG + Chr3:102988948-102988967 MsG0380017994.01.T01:intron 15.0%
!!! AGTAGTTTTATAATACTTTT+GGG + Chr3:102985940-102985959 MsG0380017994.01.T01:intron 15.0%
!!! AGTGTTTTTTTCTTATAAAT+TGG - Chr3:102983101-102983120 None:intergenic 15.0%
!!! ATCTTCTAATTTTTATTTGT+GGG + Chr3:102989866-102989885 MsG0380017994.01.T01:intron 15.0%
!!! ATCTTTTTTTGCTTATAAAT+TGG + Chr3:102983512-102983531 MsG0380017994.01.T01:intron 15.0%
!!! ATTGCTTTTTTTTTTATGTA+TGG + Chr3:102986329-102986348 MsG0380017994.01.T01:intron 15.0%
!!! CAAATAAACAAGATTATTTT+TGG - Chr3:102989144-102989163 None:intergenic 15.0%
!!! CATTAGTATAAATTCTAAAA+AGG + Chr3:102984455-102984474 MsG0380017994.01.T01:intron 15.0%
!!! GAAAATTTTAATAAATTGCA+TGG - Chr3:102983195-102983214 None:intergenic 15.0%
!!! GTGTTTTTTTCTTATAAATT+GGG - Chr3:102983100-102983119 None:intergenic 15.0%
!!! TACCTTTTTTTATTGAAAAA+TGG - Chr3:102988953-102988972 None:intergenic 15.0%
!!! TAGTAGTTTTATAATACTTT+TGG + Chr3:102985939-102985958 MsG0380017994.01.T01:intron 15.0%
!!! TATAGTTTTTTAGATTTGTA+TGG + Chr3:102982353-102982372 MsG0380017994.01.T01:intron 15.0%
!!! TATCTTCTAATTTTTATTTG+TGG + Chr3:102989865-102989884 MsG0380017994.01.T01:intron 15.0%
!!! TCTAGAATATTAATAAGAAT+TGG + Chr3:102983459-102983478 MsG0380017994.01.T01:intron 15.0%
!!! TCTTTTTTTGCTTATAAATT+GGG + Chr3:102983513-102983532 MsG0380017994.01.T01:intron 15.0%
!!! TTAATGTAATATGAATTTTG+AGG + Chr3:102990329-102990348 MsG0380017994.01.T01:three_prime_UTR 15.0%
!!! TTTTAGTCCATATATTTTAT+TGG - Chr3:102989417-102989436 None:intergenic 15.0%
!! AAAAATGAAGTATAATCATG+AGG - Chr3:102990302-102990321 None:intergenic 20.0%
!! AAAACGAAATACTTATTCAA+TGG - Chr3:102984997-102985016 None:intergenic 20.0%
!! AAACGAAATACTTATTCAAT+GGG - Chr3:102984996-102985015 None:intergenic 20.0%
!! AAATAAAAATATCAGCAACA+AGG + Chr3:102989451-102989470 MsG0380017994.01.T01:intron 20.0%
!! AAATAACTCTACCTTTATAA+TGG + Chr3:102988088-102988107 MsG0380017994.01.T01:intron 20.0%
!! AATAAAATCCCATAAATAGA+GGG - Chr3:102987279-102987298 None:intergenic 20.0%
!! AATTATATATATCCTTGTTC+AGG + Chr3:102987071-102987090 MsG0380017994.01.T01:intron 20.0%
!! AGAAATAGAAAATCATCTTT+CGG - Chr3:102986289-102986308 None:intergenic 20.0%
!! CAAACTTATGGTATAAAAAA+AGG - Chr3:102988602-102988621 None:intergenic 20.0%
!! CTATCTTCTATTATATTTGT+AGG + Chr3:102984671-102984690 MsG0380017994.01.T01:intron 20.0%
!! CTTGAAACTAAATAAACATA+TGG - Chr3:102983248-102983267 None:intergenic 20.0%
!! GAATATTAATAAGAATTGGT+TGG + Chr3:102983463-102983482 MsG0380017994.01.T01:intron 20.0%
!! GACATAAATGCTAAATAAAA+TGG - Chr3:102987652-102987671 None:intergenic 20.0%
!! GTAAAGAATTACAAACTATT+CGG + Chr3:102990175-102990194 MsG0380017994.01.T01:three_prime_UTR 20.0%
!! GTGTTAATTATAATATGCAT+CGG - Chr3:102983328-102983347 None:intergenic 20.0%
!! TAATAAAATCCCATAAATAG+AGG - Chr3:102987280-102987299 None:intergenic 20.0%
!! TGAAAAATTATGTAAGTCTT+TGG + Chr3:102986501-102986520 MsG0380017994.01.T01:intron 20.0%
!! TGTATAAATAATTAATGCAG+AGG - Chr3:102983302-102983321 None:intergenic 20.0%
!! TGTATTCATAGGAAATATAA+AGG + Chr3:102989946-102989965 MsG0380017994.01.T01:CDS 20.0%
!! TTTCTTTCTAAACATAAGTT+CGG + Chr3:102989651-102989670 MsG0380017994.01.T01:intron 20.0%
!!! AAACATTTAGAGAAGTATTA+CGG - Chr3:102984363-102984382 None:intergenic 20.0%
!!! AATTTTAATAAATTGCATGG+GGG - Chr3:102983192-102983211 None:intergenic 20.0%
!!! ACAGAGATCTATATTTTAAT+GGG - Chr3:102985340-102985359 None:intergenic 20.0%
!!! AGATAAATTTTGATTCAAGA+TGG + Chr3:102990098-102990117 MsG0380017994.01.T01:three_prime_UTR 20.0%
!!! ATAAACAAGATTATTTTTGG+TGG - Chr3:102989141-102989160 None:intergenic 20.0%
!!! ATATTTCAAGTGTAAAATCT+CGG + Chr3:102987325-102987344 MsG0380017994.01.T01:intron 20.0%
!!! GTAGTTTTATAATACTTTTG+GGG + Chr3:102985941-102985960 MsG0380017994.01.T01:intron 20.0%
!!! TAAATTGAATTTTTCCATCA+TGG - Chr3:102984327-102984346 None:intergenic 20.0%
!!! TAACAAAATGAATTTTCTTG+AGG + Chr3:102988576-102988595 MsG0380017994.01.T01:intron 20.0%
!!! TACAGAGATCTATATTTTAA+TGG - Chr3:102985341-102985360 None:intergenic 20.0%
!!! TTAAGTACATTTCTTTTAAG+AGG + Chr3:102983001-102983020 MsG0380017994.01.T01:intron 20.0%
!!! TTTGTTATTTTAATTGAGTG+CGG + Chr3:102985068-102985087 MsG0380017994.01.T01:intron 20.0%
!!! TTTTTTCTTATAAATTGGGA+CGG - Chr3:102983096-102983115 None:intergenic 20.0%
! AACGAAATACTTATTCAATG+GGG - Chr3:102984995-102985014 None:intergenic 25.0%
! AACTGTTAAGAAAGAATTAG+AGG + Chr3:102983938-102983957 MsG0380017994.01.T01:intron 25.0%
! AAGAAAGAATTAGAGGTTAA+TGG + Chr3:102983945-102983964 MsG0380017994.01.T01:intron 25.0%
! AAGTGTATTCCAATAGTTAT+AGG - Chr3:102990279-102990298 None:intergenic 25.0%
! AATAACCTAGAAATTAGAGA+TGG - Chr3:102982067-102982086 None:intergenic 25.0%
! AATCTCATTAACCAAAAAGA+GGG - Chr3:102990125-102990144 None:intergenic 25.0%
! ACAGAATTACAAATAGAACT+CGG - Chr3:102982653-102982672 None:intergenic 25.0%
! AGATAGATAGGAAAGAAAAT+GGG - Chr3:102989713-102989732 None:intergenic 25.0%
! ATAAAATCCCATAAATAGAG+GGG - Chr3:102987278-102987297 None:intergenic 25.0%
! ATAATTTATACCACTCGTTA+AGG - Chr3:102985422-102985441 None:intergenic 25.0%
! ATATAATTACAAACAAGACC+TGG - Chr3:102987059-102987078 None:intergenic 25.0%
! ATGAAACGAATATATTTGCT+AGG - Chr3:102985784-102985803 None:intergenic 25.0%
! ATGCAAGCCAATAAAATATA+TGG + Chr3:102989407-102989426 MsG0380017994.01.T01:intron 25.0%
! CAAATCCTGAAATTGTAAAA+AGG + Chr3:102982734-102982753 MsG0380017994.01.T01:CDS 25.0%
! GAATTTGCCAAAAATAAACT+AGG - Chr3:102983441-102983460 None:intergenic 25.0%
! GTAATTATCTTGTTGAATTC+TGG + Chr3:102984290-102984309 MsG0380017994.01.T01:intron 25.0%
! TAAACATATGGATGATTCAT+CGG - Chr3:102983236-102983255 None:intergenic 25.0%
! TAAAGATTTGATCCTAAGTA+TGG + Chr3:102988381-102988400 MsG0380017994.01.T01:intron 25.0%
! TAATGAGATTGGATTTAATC+AGG + Chr3:102990135-102990154 MsG0380017994.01.T01:three_prime_UTR 25.0%
! TAATTGCTGGATTTAATTCT+CGG - Chr3:102984836-102984855 None:intergenic 25.0%
! TATATTGTATTAGCCATTGA+AGG - Chr3:102986830-102986849 None:intergenic 25.0%
! TATGCAAGATATAGAATTTG+AGG - Chr3:102985390-102985409 None:intergenic 25.0%
! TATTCTCATAATATTTGCCT+TGG + Chr3:102985033-102985052 MsG0380017994.01.T01:intron 25.0%
! TCATTGACAACTAATCTAAT+TGG + Chr3:102989197-102989216 MsG0380017994.01.T01:intron 25.0%
! TCTCAAAAAATGCATCATAA+AGG - Chr3:102986079-102986098 None:intergenic 25.0%
! TGTTAAGTGAAGATAAAGAA+TGG + Chr3:102989554-102989573 MsG0380017994.01.T01:intron 25.0%
! TTCTATCAAAAACCATACTT+AGG - Chr3:102988396-102988415 None:intergenic 25.0%
! TTGGAACAATAGAATTAAGT+AGG - Chr3:102983164-102983183 None:intergenic 25.0%
!! AAAATTTGAGTTATCGACAA+AGG - Chr3:102984935-102984954 None:intergenic 25.0%
!! AATTGATTTCGATTCGTTAT+TGG + Chr3:102981497-102981516 MsG0380017994.01.T01:intron 25.0%
!! ATTATCATCGCTGTAAATTT+TGG + Chr3:102984240-102984259 MsG0380017994.01.T01:intron 25.0%
!! ATTGTTGCTAATTGTGATTT+TGG + Chr3:102981833-102981852 MsG0380017994.01.T01:intron 25.0%
!! CTATTTCTTTGATCTTGTAA+AGG + Chr3:102982421-102982440 MsG0380017994.01.T01:intron 25.0%
!! GAAAGATGATTTTCTATTTC+TGG + Chr3:102986288-102986307 MsG0380017994.01.T01:intron 25.0%
!! GATTTTATGTTTTGTACTCA+GGG - Chr3:102988658-102988677 None:intergenic 25.0%
!! GTCTCTTTTGCTTATAATTT+GGG - Chr3:102983131-102983150 None:intergenic 25.0%
!! TAAATTCTAAAAAGGGTTTG+TGG + Chr3:102984463-102984482 MsG0380017994.01.T01:intron 25.0%
!! TATCTATATTGCTGTTGAAA+TGG + Chr3:102984185-102984204 MsG0380017994.01.T01:intron 25.0%
!! TATGGACTAAAAAAACATCA+AGG + Chr3:102989425-102989444 MsG0380017994.01.T01:intron 25.0%
!! TATTAATAGGCTAGTTAAGT+TGG + Chr3:102987980-102987999 MsG0380017994.01.T01:intron 25.0%
!! TCGTTAAACACATTTTTGAT+AGG + Chr3:102986931-102986950 MsG0380017994.01.T01:CDS 25.0%
!! TGAAACGAATATATTTGCTA+GGG - Chr3:102985783-102985802 None:intergenic 25.0%
!! TGATTTTATGTTTTGTACTC+AGG - Chr3:102988659-102988678 None:intergenic 25.0%
!! TTTTTGCTTATAAATTGGGA+CGG + Chr3:102983517-102983536 MsG0380017994.01.T01:intron 25.0%
!!! ACACCAATAATATTTTAGAG+TGG - Chr3:102989812-102989831 None:intergenic 25.0%
!!! ATCGTTTTTCCAAAGATTAT+TGG - Chr3:102989172-102989191 None:intergenic 25.0%
!!! ATTTGTTTTTGTTCCTTCAA+TGG + Chr3:102986814-102986833 MsG0380017994.01.T01:intron 25.0%
!!! CACCAATAATATTTTAGAGT+GGG - Chr3:102989811-102989830 None:intergenic 25.0%
!!! GTTGGTTGATATAAAGATTT+TGG + Chr3:102987998-102988017 MsG0380017994.01.T01:intron 25.0%
!!! TAATACTTTTGGGGAATATT+TGG + Chr3:102985950-102985969 MsG0380017994.01.T01:intron 25.0%
!!! TATATTTTAATGGGAACTTC+TGG - Chr3:102985331-102985350 None:intergenic 25.0%
!!! TCGTTTTTCCAAAGATTATT+GGG - Chr3:102989171-102989190 None:intergenic 25.0%
!!! TGGTATTTTGATTTATTTGC+AGG + Chr3:102986349-102986368 MsG0380017994.01.T01:intron 25.0%
AAAAATGACGACACAAACAT+TGG - Chr3:102990366-102990385 None:intergenic 30.0%
AAAATCCAAATGGAATGATG+AGG - Chr3:102989242-102989261 None:intergenic 30.0%
AAACATGTGTGATCTTGAAT+TGG - Chr3:102989918-102989937 None:intergenic 30.0%
AAAGATTTGATCCTAAGTCA+AGG + Chr3:102988487-102988506 MsG0380017994.01.T01:intron 30.0%
AAATAGAATAAGACGATCAC+AGG - Chr3:102988699-102988718 None:intergenic 30.0%
AAATATGGTTTATCATGGTG+AGG - Chr3:102987739-102987758 None:intergenic 30.0%
AACATGTGTGATCTTGAATT+GGG - Chr3:102989917-102989936 None:intergenic 30.0%
AATACCCTAATCTTTCTTTG+GGG - Chr3:102989027-102989046 None:intergenic 30.0%
AATACTACAGAAACGAGAAT+TGG - Chr3:102981452-102981471 None:intergenic 30.0%
AATAGAAAATCATCTTTCGG+CGG - Chr3:102986286-102986305 None:intergenic 30.0%
AATATGGTTTATCATGGTGA+GGG - Chr3:102987738-102987757 None:intergenic 30.0%
AATGGTGTATCTGATGATAA+AGG + Chr3:102982284-102982303 MsG0380017994.01.T01:CDS 30.0%
AATTTCATTGCAACATCCTT+TGG - Chr3:102990004-102990023 None:intergenic 30.0%
ACAAGTTACACGCATATATA+AGG - Chr3:102986148-102986167 None:intergenic 30.0%
ACAATAAATGAACGCAAGAA+AGG + Chr3:102988882-102988901 MsG0380017994.01.T01:intron 30.0%
ACAATACCCTAATCTTTCTT+TGG - Chr3:102989029-102989048 None:intergenic 30.0%
ACATGTTCTAATAATTGCTC+TGG - Chr3:102986993-102987012 None:intergenic 30.0%
ACTCTCAAGAAAATCATAGA+AGG - Chr3:102984739-102984758 None:intergenic 30.0%
AGAATTAAGTAGGTCAAAAG+TGG - Chr3:102983154-102983173 None:intergenic 30.0%
AGAATTACAAACTATTCGGT+TGG + Chr3:102990179-102990198 MsG0380017994.01.T01:three_prime_UTR 30.0%
AGAATTAGAGGTTAATGGTT+TGG + Chr3:102983950-102983969 MsG0380017994.01.T01:intron 30.0%
AGGAACCACTTATAAATTAC+TGG - Chr3:102984146-102984165 None:intergenic 30.0%
AGTCTAAAGATATGGGATTA+AGG + Chr3:102982259-102982278 MsG0380017994.01.T01:CDS 30.0%
ATCCTGAAATTGTAAAAAGG+TGG + Chr3:102982737-102982756 MsG0380017994.01.T01:CDS 30.0%
ATCTAATTTCAGGAATGCAT+GGG + Chr3:102987468-102987487 MsG0380017994.01.T01:intron 30.0%
ATCTCATTAACCAAAAAGAG+GGG - Chr3:102990124-102990143 None:intergenic 30.0%
ATCTTAAAGAAGGGTAGTTT+AGG + Chr3:102983412-102983431 MsG0380017994.01.T01:intron 30.0%
ATGTCTGTGTTTGTGTAAAA+TGG + Chr3:102987667-102987686 MsG0380017994.01.T01:intron 30.0%
ATTTCCTGAGTAACATTCTT+AGG + Chr3:102985474-102985493 MsG0380017994.01.T01:CDS 30.0%
CAACTCCAGTAATTTATAAG+TGG + Chr3:102984138-102984157 MsG0380017994.01.T01:intron 30.0%
CAAGTGTATCAACCTTAAAA+AGG - Chr3:102986773-102986792 None:intergenic 30.0%
CAATACCCTAATCTTTCTTT+GGG - Chr3:102989028-102989047 None:intergenic 30.0%
CAATATGATATCCAAGAGAT+TGG + Chr3:102988848-102988867 MsG0380017994.01.T01:intron 30.0%
CAATCTCATTAACCAAAAAG+AGG - Chr3:102990126-102990145 None:intergenic 30.0%
CAGCATCAAAATTCAAATTC+TGG - Chr3:102982033-102982052 None:intergenic 30.0%
CATCTCAGAAAAGAAAACTA+AGG + Chr3:102989374-102989393 MsG0380017994.01.T01:intron 30.0%
CATGAAGAAATCTGACAATT+AGG - Chr3:102988994-102989013 None:intergenic 30.0%
CATGTGTTTGATATGATTAC+AGG + Chr3:102986560-102986579 MsG0380017994.01.T01:intron 30.0%
CTAATTGTCAGATTTCTTCA+TGG + Chr3:102988992-102989011 MsG0380017994.01.T01:intron 30.0%
CTCTCAAGAAAATCATAGAA+GGG - Chr3:102984738-102984757 None:intergenic 30.0%
CTTTCAGTTATTCACTGTTA+TGG + Chr3:102989835-102989854 MsG0380017994.01.T01:intron 30.0%
GAAGCATAATTATACCTCTA+CGG - Chr3:102983375-102983394 None:intergenic 30.0%
GAATAACAAGAAGAAGAAGA+AGG - Chr3:102981209-102981228 None:intergenic 30.0%
GAATTAAGTAGGTCAAAAGT+GGG - Chr3:102983153-102983172 None:intergenic 30.0%
GAATTACAAACTATTCGGTT+GGG + Chr3:102990180-102990199 MsG0380017994.01.T01:three_prime_UTR 30.0%
GAGATAGATAGGAAAGAAAA+TGG - Chr3:102989714-102989733 None:intergenic 30.0%
TAAAAAGGGTTTGTGGTATT+TGG + Chr3:102984470-102984489 MsG0380017994.01.T01:intron 30.0%
TAAATCTTCGTGCTTATTTG+TGG + Chr3:102982134-102982153 MsG0380017994.01.T01:intron 30.0%
TAACACTACATATGCTTCTA+TGG + Chr3:102983342-102983361 MsG0380017994.01.T01:intron 30.0%
TAATTGTTAGATGTAGAGGA+AGG + Chr3:102983896-102983915 MsG0380017994.01.T01:intron 30.0%
TATCTAATTTCAGGAATGCA+TGG + Chr3:102987467-102987486 MsG0380017994.01.T01:intron 30.0%
TATGCAGATAAATACTGACA+GGG + Chr3:102988253-102988272 MsG0380017994.01.T01:intron 30.0%
TCATAAAACAATCCAAATCC+AGG + Chr3:102987038-102987057 MsG0380017994.01.T01:intron 30.0%
TCCAAACAACTAATCTGTAA+TGG - Chr3:102988774-102988793 None:intergenic 30.0%
TCCAAGTGTGTTTAGATAAA+GGG - Chr3:102986390-102986409 None:intergenic 30.0%
TCTCAAGAAAATCATAGAAG+GGG - Chr3:102984737-102984756 None:intergenic 30.0%
TGTAAAATCTCGGCATAAAT+TGG + Chr3:102987335-102987354 MsG0380017994.01.T01:intron 30.0%
TGTCATTGCATTAAGAATGT+GGG - Chr3:102983736-102983755 None:intergenic 30.0%
TTAATCCCATATCTTTAGAC+TGG - Chr3:102982260-102982279 None:intergenic 30.0%
TTAGAAAATTTCCCAAGTGT+TGG - Chr3:102987222-102987241 None:intergenic 30.0%
TTCCTCTACATCTAACAATT+AGG - Chr3:102983897-102983916 None:intergenic 30.0%
TTGTCATTGCATTAAGAATG+TGG - Chr3:102983737-102983756 None:intergenic 30.0%
TTTCCTGAGTAACATTCTTA+GGG + Chr3:102985475-102985494 MsG0380017994.01.T01:CDS 30.0%
! AGGTTTTTATCTTCAGCTAA+AGG + Chr3:102981967-102981986 MsG0380017994.01.T01:intron 30.0%
! CAGTTTGTTCATATTTCTTC+TGG + Chr3:102985670-102985689 MsG0380017994.01.T01:intron 30.0%
! CGTTTTTCCAAAGATTATTG+GGG - Chr3:102989170-102989189 None:intergenic 30.0%
! CTTTGGTTTCAAAATCCAAA+TGG - Chr3:102989252-102989271 None:intergenic 30.0%
! CTTTTCCAGTCTAAAGATAT+GGG + Chr3:102982252-102982271 MsG0380017994.01.T01:CDS 30.0%
! GATACTGGAAGTATAATGTT+GGG + Chr3:102990253-102990272 MsG0380017994.01.T01:three_prime_UTR 30.0%
! GGTCTCTTTTGCTTATAATT+TGG - Chr3:102983132-102983151 None:intergenic 30.0%
! TAGCAGAAGTGATTTTTAAC+AGG + Chr3:102984954-102984973 MsG0380017994.01.T01:intron 30.0%
! TCAACCATCTTTTCTACAAT+GGG - Chr3:102983786-102983805 None:intergenic 30.0%
! TCCATTACAGATTAGTTGTT+TGG + Chr3:102988770-102988789 MsG0380017994.01.T01:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + Chr3:102988401-102988420 MsG0380017994.01.T01:intron 30.0%
! TTATAAGTGGTTCCTTTTCA+AGG + Chr3:102984151-102984170 MsG0380017994.01.T01:intron 30.0%
! TTCAACCATCTTTTCTACAA+TGG - Chr3:102983787-102983806 None:intergenic 30.0%
! TTTAGACCTCTAAAGATGTT+TGG - Chr3:102988283-102988302 None:intergenic 30.0%
! TTTTGCCATCTCTAATTTCT+AGG + Chr3:102982059-102982078 MsG0380017994.01.T01:intron 30.0%
!! AAACTTTGGGAACCTTTTTA+AGG + Chr3:102986758-102986777 MsG0380017994.01.T01:CDS 30.0%
!! AAAGAAAGATTAGGGTATTG+TGG + Chr3:102989028-102989047 MsG0380017994.01.T01:CDS 30.0%
!! ATTACTACACTTTTGAAGAC+AGG + Chr3:102985200-102985219 MsG0380017994.01.T01:CDS 30.0%
!! CTCCCACTCTAAAATATTAT+TGG + Chr3:102989806-102989825 MsG0380017994.01.T01:intron 30.0%
!! TAGGAAGCCTAGTTTATTTT+TGG + Chr3:102983431-102983450 MsG0380017994.01.T01:intron 30.0%
!! TCTTCTTCTTGTTATTCTCT+GGG + Chr3:102981212-102981231 MsG0380017994.01.T01:five_prime_UTR 30.0%
!! TTCTTCTTCTTGTTATTCTC+TGG + Chr3:102981211-102981230 MsG0380017994.01.T01:five_prime_UTR 30.0%
!!! AATCTTTTTTCCTTAACGAG+TGG + Chr3:102985409-102985428 MsG0380017994.01.T01:intron 30.0%
!!! CTCTTTTTGGTTAATGAGAT+TGG + Chr3:102990124-102990143 MsG0380017994.01.T01:three_prime_UTR 30.0%
!!! GTGTATAGATCTTTTAGCTT+TGG + Chr3:102981789-102981808 MsG0380017994.01.T01:intron 30.0%
!!! GTTACTAGTTTTTCAGACAA+AGG - Chr3:102986218-102986237 None:intergenic 30.0%
!!! TTGTATCATGCTGACTTTTA+TGG + Chr3:102983555-102983574 MsG0380017994.01.T01:intron 30.0%
AAACTGGTTGCAGAATGTAT+AGG - Chr3:102989289-102989308 None:intergenic 35.0%
AAAGAAAACTTCTGTGGCTT+CGG - Chr3:102982220-102982239 None:intergenic 35.0%
AAATAAGCATGTCGCATACA+TGG - Chr3:102982695-102982714 None:intergenic 35.0%
AAGTCAGCAAGTTCAAAAGA+TGG + Chr3:102988728-102988747 MsG0380017994.01.T01:intron 35.0%
AAGTGTAGTAATAGCAAGTG+TGG - Chr3:102985192-102985211 None:intergenic 35.0%
AATAAGCATGTCGCATACAT+GGG - Chr3:102982694-102982713 None:intergenic 35.0%
AATACTGTCATCAACCTTCT+TGG + Chr3:102987565-102987584 MsG0380017994.01.T01:CDS 35.0%
AATGTTGGGCCTATAACTAT+TGG + Chr3:102990267-102990286 MsG0380017994.01.T01:three_prime_UTR 35.0%
ACAAAGCTCAAGTTTAACCA+AGG - Chr3:102985053-102985072 None:intergenic 35.0%
ACAGCAGCAAATCTTAAAAC+TGG - Chr3:102984891-102984910 None:intergenic 35.0%
ACAGCGATGATAATCAATGT+AGG - Chr3:102984234-102984253 None:intergenic 35.0%
ACCCTTTATCTAAACACACT+TGG + Chr3:102986386-102986405 MsG0380017994.01.T01:CDS 35.0%
ACGAAGAGTTCAAAAGAAAC+AGG - Chr3:102987624-102987643 None:intergenic 35.0%
ACTATCAACTCATCACTAGA+AGG - Chr3:102981771-102981790 None:intergenic 35.0%
AGATATGGGATTAAGGAGAA+TGG + Chr3:102982266-102982285 MsG0380017994.01.T01:CDS 35.0%
AGATGGTTGAATCTCGATTT+AGG + Chr3:102983796-102983815 MsG0380017994.01.T01:intron 35.0%
AGCAGATTACACATTGAAAG+TGG + Chr3:102987442-102987461 MsG0380017994.01.T01:intron 35.0%
AGCCTAATTGTTAGATGTAG+AGG + Chr3:102983892-102983911 MsG0380017994.01.T01:intron 35.0%
AGGAAATAATACACAGTCAG+GGG + Chr3:102984707-102984726 MsG0380017994.01.T01:CDS 35.0%
AGTAACATTCTTAGGGAAGA+AGG + Chr3:102985482-102985501 MsG0380017994.01.T01:CDS 35.0%
AGTGTAGTATCTATGGTTCA+AGG - Chr3:102985729-102985748 None:intergenic 35.0%
ATCATAAAACATGTCCCACT+AGG - Chr3:102984040-102984059 None:intergenic 35.0%
ATCTATCTCTTCTCCAACAT+TGG + Chr3:102989725-102989744 MsG0380017994.01.T01:intron 35.0%
ATGAAAACATACACCCAAAG+TGG + Chr3:102987918-102987937 MsG0380017994.01.T01:intron 35.0%
ATGATCCACAATTAGATGCT+AGG + Chr3:102981934-102981953 MsG0380017994.01.T01:CDS 35.0%
ATGTTGGAGAAGAGATAGAT+AGG - Chr3:102989725-102989744 None:intergenic 35.0%
ATGTTTGAGAAAACCCACTT+TGG - Chr3:102987935-102987954 None:intergenic 35.0%
ATTCCAGAGTTTGCAAACTT+TGG + Chr3:102986744-102986763 MsG0380017994.01.T01:CDS 35.0%
CAATTACGATAACCTGAACA+AGG - Chr3:102987086-102987105 None:intergenic 35.0%
CAATTCCTCATCATTCCATT+TGG + Chr3:102989234-102989253 MsG0380017994.01.T01:intron 35.0%
CACTAACTGCAACATTGATA+TGG + Chr3:102985133-102985152 MsG0380017994.01.T01:CDS 35.0%
CAGATTACACATTGAAAGTG+GGG + Chr3:102987444-102987463 MsG0380017994.01.T01:intron 35.0%
CAGGAAATAATACACAGTCA+GGG + Chr3:102984706-102984725 MsG0380017994.01.T01:CDS 35.0%
CAGTGAATTATAGTTCGCTT+CGG + Chr3:102982880-102982899 MsG0380017994.01.T01:intron 35.0%
CCTTTCATGGGAATTGAAAA+GGG + Chr3:102981882-102981901 MsG0380017994.01.T01:CDS 35.0%
CGTTCATTTATTGTAGTTCC+CGG - Chr3:102988876-102988895 None:intergenic 35.0%
CTCCAAGTGTGTTTAGATAA+AGG - Chr3:102986391-102986410 None:intergenic 35.0%
CTTAGCAAAACAAATATGCG+CGG - Chr3:102986014-102986033 None:intergenic 35.0%
CTTTATCTAAACACACTTGG+AGG + Chr3:102986389-102986408 MsG0380017994.01.T01:CDS 35.0%
CTTTCATGGGAATTGAAAAG+GGG + Chr3:102981883-102981902 MsG0380017994.01.T01:CDS 35.0%
GAGGAATTGCTTCAACTTAA+TGG - Chr3:102989223-102989242 None:intergenic 35.0%
GATGACAGTATTTACAGCTT+CGG - Chr3:102987557-102987576 None:intergenic 35.0%
GCAGATTACACATTGAAAGT+GGG + Chr3:102987443-102987462 MsG0380017994.01.T01:intron 35.0%
GGTAAATGAGTGCAGTATTT+AGG + Chr3:102989309-102989328 MsG0380017994.01.T01:intron 35.0%
GGTTTGGATATAGACATACA+TGG + Chr3:102983966-102983985 MsG0380017994.01.T01:intron 35.0%
GTATGCAGATAAATACTGAC+AGG + Chr3:102988252-102988271 MsG0380017994.01.T01:intron 35.0%
GTGTAGTATCTATGGTTCAA+GGG - Chr3:102985728-102985747 None:intergenic 35.0%
GTTTGTGTAAAATGGTTGTG+AGG + Chr3:102987675-102987694 MsG0380017994.01.T01:intron 35.0%
TACAGTAGGAAATTGTGTCA+TGG + Chr3:102989613-102989632 MsG0380017994.01.T01:intron 35.0%
TATACATTCTGCAACCAGTT+TGG + Chr3:102989288-102989307 MsG0380017994.01.T01:intron 35.0%
TCAGGAAATAATACACAGTC+AGG + Chr3:102984705-102984724 MsG0380017994.01.T01:CDS 35.0%
TCAGGATTTGTCTGTAAAGA+GGG - Chr3:102982724-102982743 None:intergenic 35.0%
TCGGCAAATGTATAAACATG+TGG - Chr3:102983217-102983236 None:intergenic 35.0%
TCTATGGAATTAAACCGTAG+AGG + Chr3:102983358-102983377 MsG0380017994.01.T01:intron 35.0%
TGAAAACATACACCCAAAGT+GGG + Chr3:102987919-102987938 MsG0380017994.01.T01:intron 35.0%
TGAGACTGATAAAGCTGTAA+AGG + Chr3:102986427-102986446 MsG0380017994.01.T01:CDS 35.0%
TGATAATCAATGTAGGTCCT+AGG - Chr3:102984227-102984246 None:intergenic 35.0%
TGTAGTATCTATGGTTCAAG+GGG - Chr3:102985727-102985746 None:intergenic 35.0%
TGTTTGAGAAAACCCACTTT+GGG - Chr3:102987934-102987953 None:intergenic 35.0%
TTACAAACAAGACCTGGATT+TGG - Chr3:102987053-102987072 None:intergenic 35.0%
TTACTGTAGCATAGTTACTG+TGG + Chr3:102987801-102987820 MsG0380017994.01.T01:intron 35.0%
TTCAGGATTTGTCTGTAAAG+AGG - Chr3:102982725-102982744 None:intergenic 35.0%
TTCCAGAGTTTGCAAACTTT+GGG + Chr3:102986745-102986764 MsG0380017994.01.T01:CDS 35.0%
TTCTTATAAATTGGGACGGA+GGG - Chr3:102983092-102983111 None:intergenic 35.0%
TTTCATGGGAATTGAAAAGG+GGG + Chr3:102981884-102981903 MsG0380017994.01.T01:CDS 35.0%
TTTCTTATAAATTGGGACGG+AGG - Chr3:102983093-102983112 None:intergenic 35.0%
TTTGTACAGTTTCATGCACT+GGG + Chr3:102982799-102982818 MsG0380017994.01.T01:CDS 35.0%
! AAAAAAGAAGGCCTTTGAGA+AGG - Chr3:102984408-102984427 None:intergenic 35.0%
! AAAGTGGGGTATCTAATTTC+AGG + Chr3:102987458-102987477 MsG0380017994.01.T01:intron 35.0%
! AAAGTTTGCAAACTCTGGAA+TGG - Chr3:102986745-102986764 None:intergenic 35.0%
! AGAGTGTTTAGTTCAACAGA+GGG + Chr3:102988022-102988041 MsG0380017994.01.T01:intron 35.0%
! CCTTTTCAATTCCCATGAAA+GGG - Chr3:102981884-102981903 None:intergenic 35.0%
! CGATACTGGAAGTATAATGT+TGG + Chr3:102990252-102990271 MsG0380017994.01.T01:three_prime_UTR 35.0%
! CTCCACCTTTTTACAATTTC+AGG - Chr3:102982742-102982761 None:intergenic 35.0%
! CTTTTCAATTCCCATGAAAG+GGG - Chr3:102981883-102981902 None:intergenic 35.0%
! GAGATGTTCATTTTGTCACT+TGG - Chr3:102989360-102989379 None:intergenic 35.0%
! GCTTTTCCAGTCTAAAGATA+TGG + Chr3:102982251-102982270 MsG0380017994.01.T01:CDS 35.0%
! TCGGCATAAATTGGATTTTC+AGG + Chr3:102987344-102987363 MsG0380017994.01.T01:intron 35.0%
! TCTGAAGTTTATTGTTCGAG+AGG + Chr3:102987245-102987264 MsG0380017994.01.T01:CDS 35.0%
! TGAGTGCAGTATTTAGGATT+AGG + Chr3:102989315-102989334 MsG0380017994.01.T01:intron 35.0%
! TGTTCAGGTTATCGTAATTG+TGG + Chr3:102987086-102987105 MsG0380017994.01.T01:intron 35.0%
! TTTGAGACCCCAATAATCTT+TGG + Chr3:102989160-102989179 MsG0380017994.01.T01:intron 35.0%
! TTTGTTGTCGGTGTATTCAT+AGG + Chr3:102989935-102989954 MsG0380017994.01.T01:CDS 35.0%
! TTTTGTACAGTTTCATGCAC+TGG + Chr3:102982798-102982817 MsG0380017994.01.T01:CDS 35.0%
!! AGATCACACATGTTTGTTGT+CGG + Chr3:102989923-102989942 MsG0380017994.01.T01:CDS 35.0%
!! GAAATATAAAGGTGCTTGTG+CGG + Chr3:102989957-102989976 MsG0380017994.01.T01:CDS 35.0%
!! TCTTTTTGACAGTGATGATG+AGG + Chr3:102986040-102986059 MsG0380017994.01.T01:intron 35.0%
!! TTGATAGTGTATCTGATCGA+AGG + Chr3:102981578-102981597 MsG0380017994.01.T01:intron 35.0%
!! TTTTGTCACTTGGATTGTTC+TGG - Chr3:102989350-102989369 None:intergenic 35.0%
!!! AAATTGCATGGGGGTATTTT+TGG - Chr3:102983183-102983202 None:intergenic 35.0%
!!! ATTTTAGAGTGGGAGAGAAA+TGG - Chr3:102989801-102989820 None:intergenic 35.0%
!!! GGTTTTAGACTGCAAACTTA+TGG - Chr3:102988614-102988633 None:intergenic 35.0%
AAAGAAACAGGTAACACCAC+TGG - Chr3:102987612-102987631 None:intergenic 40.0%
AAATGGTTATACCCACATGC+AGG - Chr3:102988936-102988955 None:intergenic 40.0%
AACATTCTTAGGGAAGAAGG+TGG + Chr3:102985485-102985504 MsG0380017994.01.T01:CDS 40.0%
AATGAACGCAAGAAAGGAAC+AGG + Chr3:102988888-102988907 MsG0380017994.01.T01:intron 40.0%
AATGAATGCACAACTCACTC+GGG - Chr3:102981256-102981275 None:intergenic 40.0%
AATGCCACAAAAATCTGTCC+AGG - Chr3:102987180-102987199 None:intergenic 40.0%
ACAAAGGCTTACCTTGTTCA+AGG - Chr3:102984919-102984938 None:intergenic 40.0%
ACCATAGATACTACACTTCC+TGG + Chr3:102985732-102985751 MsG0380017994.01.T01:intron 40.0%
ACTGCACTCATTTACCAAAC+TGG - Chr3:102989305-102989324 None:intergenic 40.0%
AGAGCTATTACAGAGCTCAA+TGG + Chr3:102984801-102984820 MsG0380017994.01.T01:CDS 40.0%
AGATTTCTTCATGGTCCAAC+AGG + Chr3:102989001-102989020 MsG0380017994.01.T01:intron 40.0%
AGCAAGTTCAAAAGATGGTG+AGG + Chr3:102988733-102988752 MsG0380017994.01.T01:intron 40.0%
AGCACCCATTGTAGAAAAGA+TGG + Chr3:102983779-102983798 MsG0380017994.01.T01:intron 40.0%
AGCTGAAGAACAGTAATTGC+TGG - Chr3:102984849-102984868 None:intergenic 40.0%
AGTCAGTATTCGTGCTTCAT+AGG + Chr3:102981611-102981630 MsG0380017994.01.T01:intron 40.0%
AGTCTACCAAGAATGCAGTA+AGG - Chr3:102990227-102990246 None:intergenic 40.0%
ATAAGCATGTCGCATACATG+GGG - Chr3:102982693-102982712 None:intergenic 40.0%
ATATCCAAGAGATTGGATCC+GGG + Chr3:102988855-102988874 MsG0380017994.01.T01:intron 40.0%
ATATGCATCAGCTGTTGATG+GGG - Chr3:102986706-102986725 None:intergenic 40.0%
ATCAACTCTCTGCCTTGAAA+AGG - Chr3:102984166-102984185 None:intergenic 40.0%
ATCACTGACAGTTTCATCCT+CGG - Chr3:102990038-102990057 None:intergenic 40.0%
ATCTGTCCAGGTGAATCATA+TGG - Chr3:102987168-102987187 None:intergenic 40.0%
ATCTTGAGAATGCAACAGTG+AGG + Chr3:102985818-102985837 MsG0380017994.01.T01:CDS 40.0%
ATGTCAAAAGCCTCTTCTGA+AGG - Chr3:102986588-102986607 None:intergenic 40.0%
ATGTGTGATCTTGAATTGGG+TGG - Chr3:102989914-102989933 None:intergenic 40.0%
ATTACAGGAACCTTCAGAAG+AGG + Chr3:102986575-102986594 MsG0380017994.01.T01:intron 40.0%
ATTCATGAGATTGTGGCTAG+CGG + Chr3:102990061-102990080 MsG0380017994.01.T01:CDS 40.0%
ATTGAGCTCTGTAATAGCTC+TGG - Chr3:102984802-102984821 None:intergenic 40.0%
ATTTACTAGTGCCTGCATGT+GGG + Chr3:102988922-102988941 MsG0380017994.01.T01:intron 40.0%
CAAGAAAATCATAGAAGGGG+CGG - Chr3:102984734-102984753 None:intergenic 40.0%
CAGAAATACCCCACAATCAA+TGG + Chr3:102983606-102983625 MsG0380017994.01.T01:intron 40.0%
CATCTCCTAGCATCTAATTG+TGG - Chr3:102981942-102981961 None:intergenic 40.0%
CCATAGATACTACACTTCCT+GGG + Chr3:102985733-102985752 MsG0380017994.01.T01:intron 40.0%
CCCTTTCATGGGAATTGAAA+AGG + Chr3:102981881-102981900 MsG0380017994.01.T01:CDS 40.0%
CCTGACAAACCAAACAAAGA+GGG - Chr3:102988061-102988080 None:intergenic 40.0%
CGAGAATTGGAAACGAAACA+TGG - Chr3:102981439-102981458 None:intergenic 40.0%
CTGCTATACCTACTGAATCA+GGG + Chr3:102982093-102982112 MsG0380017994.01.T01:CDS 40.0%
CTGTAAAGGACTTCCTGTTT+GGG + Chr3:102986441-102986460 MsG0380017994.01.T01:CDS 40.0%
CTTCCCTAAGAATGTTACTC+AGG - Chr3:102985481-102985500 None:intergenic 40.0%
GAATGAATGCACAACTCACT+CGG - Chr3:102981257-102981276 None:intergenic 40.0%
GACAGCAAAGAAAACTTCTG+TGG - Chr3:102982226-102982245 None:intergenic 40.0%
GACAGGAAATGAATCAAGTG+TGG + Chr3:102985217-102985236 MsG0380017994.01.T01:CDS 40.0%
GACTGATGTATTTGTCAAGC+AGG - Chr3:102988811-102988830 None:intergenic 40.0%
GACTTGTGTAACGAATCAAC+AGG - Chr3:102984595-102984614 None:intergenic 40.0%
GATATCCAAGAGATTGGATC+CGG + Chr3:102988854-102988873 MsG0380017994.01.T01:intron 40.0%
GATATGCATCAGCTGTTGAT+GGG - Chr3:102986707-102986726 None:intergenic 40.0%
GATCGGCTACATAGATCAAA+CGG - Chr3:102984014-102984033 None:intergenic 40.0%
GCAAGTTCAAAAGATGGTGA+GGG + Chr3:102988734-102988753 MsG0380017994.01.T01:intron 40.0%
GGGATATAACCCTCTTTGTT+TGG + Chr3:102988049-102988068 MsG0380017994.01.T01:intron 40.0%
GGTATTACACTGGTAGAACA+GGG - Chr3:102988130-102988149 None:intergenic 40.0%
GTCTACCAAGAATGCAGTAA+GGG - Chr3:102990226-102990245 None:intergenic 40.0%
GTTTGCAAGTCTAAGAAGTC+AGG - Chr3:102983645-102983664 None:intergenic 40.0%
TAAGACGATCACAGGTATGT+AGG - Chr3:102988691-102988710 None:intergenic 40.0%
TACACTTCCTGGGAATTGAA+GGG + Chr3:102985743-102985762 MsG0380017994.01.T01:CDS 40.0%
TACTCGTCCCCTCTATTTAT+GGG + Chr3:102987268-102987287 MsG0380017994.01.T01:intron 40.0%
TAGAGAAATCCCTGATGCAA+AGG + Chr3:102985553-102985572 MsG0380017994.01.T01:CDS 40.0%
TAGTTGTTTGGATGTGTTGC+TGG + Chr3:102988782-102988801 MsG0380017994.01.T01:intron 40.0%
TATTTACTAGTGCCTGCATG+TGG + Chr3:102988921-102988940 MsG0380017994.01.T01:intron 40.0%
TCATATGGAAGAGACTTGAG+AGG - Chr3:102987153-102987172 None:intergenic 40.0%
TCATCATCTTTCTTCACGAG+TGG - Chr3:102981324-102981343 None:intergenic 40.0%
TCCAACAAGATTCACGTGAA+AGG - Chr3:102984629-102984648 None:intergenic 40.0%
TCCTTTCACGTGAATCTTGT+TGG + Chr3:102984625-102984644 MsG0380017994.01.T01:intron 40.0%
TCTCTTCCATATGATTCACC+TGG + Chr3:102987159-102987178 MsG0380017994.01.T01:CDS 40.0%
TCTGTATGTGTGCTGTACTA+CGG + Chr3:102985355-102985374 MsG0380017994.01.T01:intron 40.0%
TCTTGAGAATGCAACAGTGA+GGG + Chr3:102985819-102985838 MsG0380017994.01.T01:CDS 40.0%
TGAAGATGAATACCAGCTAG+AGG + Chr3:102987403-102987422 MsG0380017994.01.T01:intron 40.0%
TGATATGCATCAGCTGTTGA+TGG - Chr3:102986708-102986727 None:intergenic 40.0%
TGATCAATAACAGCTGTCAG+AGG - Chr3:102988158-102988177 None:intergenic 40.0%
TGATGCCATTCATGAGATTG+TGG + Chr3:102990054-102990073 MsG0380017994.01.T01:CDS 40.0%
TGCAGATACGACAGAATGAT+CGG + Chr3:102984505-102984524 MsG0380017994.01.T01:intron 40.0%
TGCAGTTAGTGACTGATGTT+GGG - Chr3:102985124-102985143 None:intergenic 40.0%
TGCTTATAAATTGGGACGGA+GGG + Chr3:102983521-102983540 MsG0380017994.01.T01:intron 40.0%
TGGTAAAAAGCCAACTGGTT+TGG + Chr3:102986662-102986681 MsG0380017994.01.T01:CDS 40.0%
TGGTATTACACTGGTAGAAC+AGG - Chr3:102988131-102988150 None:intergenic 40.0%
TGGTTGAATCTCGATTTAGG+TGG + Chr3:102983799-102983818 MsG0380017994.01.T01:intron 40.0%
TGTAAAAAGGTGGAGCAATG+AGG + Chr3:102982747-102982766 MsG0380017994.01.T01:CDS 40.0%
TGTAGCATAGTTACTGTGGT+GGG + Chr3:102987805-102987824 MsG0380017994.01.T01:intron 40.0%
TGTCACAAGCTCTCTTATGA+AGG + Chr3:102982451-102982470 MsG0380017994.01.T01:CDS 40.0%
TTACTATCTCTCCATCCACT+CGG + Chr3:102983582-102983601 MsG0380017994.01.T01:intron 40.0%
TTCCCAAAGTTTGCAAACTC+TGG - Chr3:102986750-102986769 None:intergenic 40.0%
TTGACAAGCGGGATATCAAA+TGG - Chr3:102986467-102986486 None:intergenic 40.0%
TTGCAGTTAGTGACTGATGT+TGG - Chr3:102985125-102985144 None:intergenic 40.0%
TTGCTTATAAATTGGGACGG+AGG + Chr3:102983520-102983539 MsG0380017994.01.T01:intron 40.0%
TTGGAAACGAAACATGGATC+TGG - Chr3:102981433-102981452 None:intergenic 40.0%
TTGTAGGTTATCTGTGAGTC+AGG + Chr3:102984687-102984706 MsG0380017994.01.T01:intron 40.0%
TTGTGATTGTGAAGATGCAG+AGG + Chr3:102989580-102989599 MsG0380017994.01.T01:intron 40.0%
TTTCTTCTCTGCAAGTGGTT+GGG - Chr3:102986637-102986656 None:intergenic 40.0%
TTTGTCCCTTACTGCATTCT+TGG + Chr3:102990218-102990237 MsG0380017994.01.T01:three_prime_UTR 40.0%
! AGAAGCAGATGAGTTTTCAG+AGG + Chr3:102987116-102987135 MsG0380017994.01.T01:CDS 40.0%
! CAGAGTGTTTAGTTCAACAG+AGG + Chr3:102988021-102988040 MsG0380017994.01.T01:intron 40.0%
! CATTGATTGTGGGGTATTTC+TGG - Chr3:102983608-102983627 None:intergenic 40.0%
! CCCTTTTCAATTCCCATGAA+AGG - Chr3:102981885-102981904 None:intergenic 40.0%
! CTACGCAGGTATTTCTTTTG+CGG + Chr3:102985633-102985652 MsG0380017994.01.T01:intron 40.0%
! GAGTGTTTAGTTCAACAGAG+GGG + Chr3:102988023-102988042 MsG0380017994.01.T01:intron 40.0%
! GCGAAGTTTTTATCTCACCT+AGG + Chr3:102984207-102984226 MsG0380017994.01.T01:intron 40.0%
! GGCATTGGGTAATTAACAAG+AGG - Chr3:102987717-102987736 None:intergenic 40.0%
! GGTAAAAAGCCAACTGGTTT+GGG + Chr3:102986663-102986682 MsG0380017994.01.T01:CDS 40.0%
! TAGATGAATGCCACTGACTA+AGG - Chr3:102982618-102982637 None:intergenic 40.0%
! TCAGGGAGAGACTTTTACAA+AGG + Chr3:102982110-102982129 MsG0380017994.01.T01:CDS 40.0%
! TTATGTTTTGTACTCAGGGC+CGG - Chr3:102988654-102988673 None:intergenic 40.0%
! TTCACCTGGACAGATTTTTG+TGG + Chr3:102987173-102987192 MsG0380017994.01.T01:CDS 40.0%
! TTGCTAGGGTCTGATGTTTT+TGG - Chr3:102985769-102985788 None:intergenic 40.0%
! TTTAGTTCAACAGAGGGGAA+GGG + Chr3:102988028-102988047 MsG0380017994.01.T01:intron 40.0%
!! CCTCTTTGTTTGGTTTGTCA+GGG + Chr3:102988059-102988078 MsG0380017994.01.T01:intron 40.0%
!! CTCTTTGTTTGGTTTGTCAG+GGG + Chr3:102988060-102988079 MsG0380017994.01.T01:intron 40.0%
!! GTTGATTCGTTACACAAGTC+AGG + Chr3:102984595-102984614 MsG0380017994.01.T01:intron 40.0%
!! TGCTGCAGTTGATGAGTTAA+AGG + Chr3:102985873-102985892 MsG0380017994.01.T01:CDS 40.0%
!! TTAGGGTATTGTGGCTTACT+CGG + Chr3:102989037-102989056 MsG0380017994.01.T01:CDS 40.0%
!! TTTATCATGGTGAGGGCATT+GGG - Chr3:102987731-102987750 None:intergenic 40.0%
!! TTTTTATTTGTGGGCTGTGC+AGG + Chr3:102989875-102989894 MsG0380017994.01.T01:intron 40.0%
!!! AGGTGGTTTTGAGTACAAGA+AGG + Chr3:102985502-102985521 MsG0380017994.01.T01:CDS 40.0%
!!! CGCGCATATTTGTTTTGCTA+AGG + Chr3:102986012-102986031 MsG0380017994.01.T01:intron 40.0%
AACCAATCTTGCAGCATACC+TGG - Chr3:102982834-102982853 None:intergenic 45.0%
AACCCTGTTTCCTTTGCATC+AGG - Chr3:102985566-102985585 None:intergenic 45.0%
AAGGAGAGTAGATCGAATGG+AGG + Chr3:102983867-102983886 MsG0380017994.01.T01:intron 45.0%
AAGGCAGCACTTGCAACAAT+TGG - Chr3:102982599-102982618 None:intergenic 45.0%
AAGTCTCTCCCTGATTCAGT+AGG - Chr3:102982104-102982123 None:intergenic 45.0%
AATACCGCTCAATTTGTGCC+AGG - Chr3:102982550-102982569 None:intergenic 45.0%
ACAGGCCCCAAAGAAAGATT+AGG + Chr3:102989019-102989038 MsG0380017994.01.T01:CDS 45.0%
ACATGTTTCTCCAGCTCAGT+TGG - Chr3:102988534-102988553 None:intergenic 45.0%
ACCCTGTTTCCTTTGCATCA+GGG - Chr3:102985565-102985584 None:intergenic 45.0%
ACGAGTCTGTGATACTAACG+TGG - Chr3:102987880-102987899 None:intergenic 45.0%
AGAAAATCATCTTTCGGCGG+AGG - Chr3:102986283-102986302 None:intergenic 45.0%
AGAGGCTCTTGGTATTACAC+TGG - Chr3:102988140-102988159 None:intergenic 45.0%
AGCTGAGTATTCCCCTTTCA+TGG + Chr3:102981869-102981888 MsG0380017994.01.T01:intron 45.0%
AGGAAGGAGAGTAGATCGAA+TGG + Chr3:102983864-102983883 MsG0380017994.01.T01:intron 45.0%
AGGAGAGTAGATCGAATGGA+GGG + Chr3:102983868-102983887 MsG0380017994.01.T01:intron 45.0%
ATCACGGTAGCTGAATCTCA+GGG - Chr3:102981294-102981313 None:intergenic 45.0%
ATCCCTGATGCAAAGGAAAC+AGG + Chr3:102985560-102985579 MsG0380017994.01.T01:CDS 45.0%
ATGGTTCAAGGGGAACAACT+TGG - Chr3:102985717-102985736 None:intergenic 45.0%
ATGTTCAGCACGAGCTAATC+AGG + Chr3:102982947-102982966 MsG0380017994.01.T01:intron 45.0%
CAGATAAATACTGACAGGGC+CGG + Chr3:102988257-102988276 MsG0380017994.01.T01:intron 45.0%
CAGGCCCCAAAGAAAGATTA+GGG + Chr3:102989020-102989039 MsG0380017994.01.T01:CDS 45.0%
CAGTGGCATTCATCTACTAC+AGG + Chr3:102982622-102982641 MsG0380017994.01.T01:CDS 45.0%
CCCTGACAAACCAAACAAAG+AGG - Chr3:102988062-102988081 None:intergenic 45.0%
CCTACGTCACAAGTCAGAAA+TGG + Chr3:102984761-102984780 MsG0380017994.01.T01:CDS 45.0%
CTAAACACACTTGGAGGTGA+TGG + Chr3:102986395-102986414 MsG0380017994.01.T01:CDS 45.0%
CTACACTTCCTGGGAATTGA+AGG + Chr3:102985742-102985761 MsG0380017994.01.T01:CDS 45.0%
CTAGTCTCCAGATTGACAAG+CGG - Chr3:102986479-102986498 None:intergenic 45.0%
CTGTAGCATAGTTACTGTGG+TGG + Chr3:102987804-102987823 MsG0380017994.01.T01:intron 45.0%
CTTGTTAGCAGCTTGACAAG+GGG + Chr3:102984543-102984562 MsG0380017994.01.T01:intron 45.0%
CTTTCTTCTCTGCAAGTGGT+TGG - Chr3:102986638-102986657 None:intergenic 45.0%
GAAAATCATCTTTCGGCGGA+GGG - Chr3:102986282-102986301 None:intergenic 45.0%
GAAATTGACTGTCAGATCCG+AGG + Chr3:102990018-102990037 MsG0380017994.01.T01:CDS 45.0%
GACGACACAAACATTGGTCA+AGG - Chr3:102990360-102990379 None:intergenic 45.0%
GAGAAAAACCTTCATCGTCG+CGG - Chr3:102981347-102981366 None:intergenic 45.0%
GCTAGCCACAATCTCATGAA+TGG - Chr3:102990062-102990081 None:intergenic 45.0%
GCTGAGTATTCCCCTTTCAT+GGG + Chr3:102981870-102981889 MsG0380017994.01.T01:intron 45.0%
GCTGCTATACCTACTGAATC+AGG + Chr3:102982092-102982111 MsG0380017994.01.T01:CDS 45.0%
GCTGTAAAGGACTTCCTGTT+TGG + Chr3:102986440-102986459 MsG0380017994.01.T01:CDS 45.0%
GGATATCAAATGGCCCAAAC+AGG - Chr3:102986457-102986476 None:intergenic 45.0%
GGTTGCAGAATGTATAGGCT+GGG - Chr3:102989284-102989303 None:intergenic 45.0%
GTAACGAATCAACAGGCACT+GGG - Chr3:102984588-102984607 None:intergenic 45.0%
GTACTCGTCCCCTCTATTTA+TGG + Chr3:102987267-102987286 MsG0380017994.01.T01:intron 45.0%
GTTCACTTATCTGTCTACGC+AGG + Chr3:102985619-102985638 MsG0380017994.01.T01:CDS 45.0%
GTTGCAGAATGTATAGGCTG+GGG - Chr3:102989283-102989302 None:intergenic 45.0%
TAAAACATGTCCCACTAGGC+AGG - Chr3:102984036-102984055 None:intergenic 45.0%
TAGAGTGGGAGAGAAATGGA+GGG - Chr3:102989797-102989816 None:intergenic 45.0%
TAGTCTCCAGATTGACAAGC+GGG - Chr3:102986478-102986497 None:intergenic 45.0%
TCCCTGATGCAAAGGAAACA+GGG + Chr3:102985561-102985580 MsG0380017994.01.T01:CDS 45.0%
TCGATCTACTCTCCTTCCTA+TGG - Chr3:102983863-102983882 None:intergenic 45.0%
TCGTGTTTGTGCAGTTGTAC+TGG - Chr3:102986968-102986987 None:intergenic 45.0%
TCTCTTCTCCAACATTGGAG+AGG + Chr3:102989730-102989749 MsG0380017994.01.T01:intron 45.0%
TGAATACCAGCTAGAGGATC+TGG + Chr3:102987409-102987428 MsG0380017994.01.T01:intron 45.0%
TGAATTGGGTGGAACAACCT+CGG - Chr3:102989903-102989922 None:intergenic 45.0%
TGATATCCCGCTTGTCAATC+TGG + Chr3:102986469-102986488 MsG0380017994.01.T01:CDS 45.0%
TGGTAGACTAGCAACGATAC+TGG + Chr3:102990238-102990257 MsG0380017994.01.T01:three_prime_UTR 45.0%
TGGTTGCAGAATGTATAGGC+TGG - Chr3:102989285-102989304 None:intergenic 45.0%
TGTAACGAATCAACAGGCAC+TGG - Chr3:102984589-102984608 None:intergenic 45.0%
TTAGAGTGGGAGAGAAATGG+AGG - Chr3:102989798-102989817 None:intergenic 45.0%
TTAGTTCAACAGAGGGGAAG+GGG + Chr3:102988029-102988048 MsG0380017994.01.T01:intron 45.0%
TTCTCCAGCTCAGTTGGTTA+GGG - Chr3:102988528-102988547 None:intergenic 45.0%
TTGCAGAATGTATAGGCTGG+GGG - Chr3:102989282-102989301 None:intergenic 45.0%
TTGTTAGCAGCTTGACAAGG+GGG + Chr3:102984544-102984563 MsG0380017994.01.T01:intron 45.0%
TTTCTCCAGCTCAGTTGGTT+AGG - Chr3:102988529-102988548 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr3:102988450-102988469 None:intergenic 45.0%
! AAGGCTTGGTTGTTGGTTGT+TGG + Chr3:102988463-102988482 MsG0380017994.01.T01:intron 45.0%
! ACCCCTAGTCCATTGATTGT+GGG - Chr3:102983618-102983637 None:intergenic 45.0%
! ACGGAGGGAGTACAATACAT+AGG - Chr3:102983077-102983096 None:intergenic 45.0%
! AGGAATGCATGGGAAAGCAT+GGG + Chr3:102987478-102987497 MsG0380017994.01.T01:intron 45.0%
! ATCTGATCGAAGGCATGTGT+CGG + Chr3:102981588-102981607 MsG0380017994.01.T01:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr3:102988451-102988470 None:intergenic 45.0%
! CACAGACTCGTTTTCGATGA+AGG + Chr3:102987889-102987908 MsG0380017994.01.T01:intron 45.0%
! CCATTTCTGACTTGTGACGT+AGG - Chr3:102984764-102984783 None:intergenic 45.0%
! CCCAGGAAGTGTAGTATCTA+TGG - Chr3:102985736-102985755 None:intergenic 45.0%
! CGGTTGTCTTTTGGACTTGA+CGG + Chr3:102989977-102989996 MsG0380017994.01.T01:CDS 45.0%
! GACCTCTAAAGATGTTTGGC+CGG - Chr3:102988279-102988298 None:intergenic 45.0%
! GCTTGTTAGCAGCTTGACAA+GGG + Chr3:102984542-102984561 MsG0380017994.01.T01:intron 45.0%
! GGTATGCTGCAAGATTGGTT+TGG + Chr3:102982834-102982853 MsG0380017994.01.T01:intron 45.0%
! GGTTGGGATTTGACTTCCTT+GGG - Chr3:102986621-102986640 None:intergenic 45.0%
! GTGTCATGGAGCACAAGTTT+TGG + Chr3:102989627-102989646 MsG0380017994.01.T01:intron 45.0%
! GTTTAGTTCAACAGAGGGGA+AGG + Chr3:102988027-102988046 MsG0380017994.01.T01:intron 45.0%
! GTTTATCATGGTGAGGGCAT+TGG - Chr3:102987732-102987751 None:intergenic 45.0%
! TACCCCACAATCAATGGACT+AGG + Chr3:102983612-102983631 MsG0380017994.01.T01:intron 45.0%
! TATGCATCAGCTGTTGATGG+GGG - Chr3:102986705-102986724 None:intergenic 45.0%
! TGCAGTCTAAAACCCTAGCT+TGG + Chr3:102988620-102988639 MsG0380017994.01.T01:intron 45.0%
! TGGCTAGCGGATAATCTATC+AGG + Chr3:102990074-102990093 MsG0380017994.01.T01:exon 45.0%
! TGGTTGGGATTTGACTTCCT+TGG - Chr3:102986622-102986641 None:intergenic 45.0%
! TTCAAGATGGCCCCTCTTTT+TGG + Chr3:102990111-102990130 MsG0380017994.01.T01:three_prime_UTR 45.0%
! TTTTGGACTTGACGGTCCAA+AGG + Chr3:102989985-102990004 MsG0380017994.01.T01:CDS 45.0%
!! AATCTTTCTTTGGGGCCTGT+TGG - Chr3:102989019-102989038 None:intergenic 45.0%
!! ACCCCACAATCAATGGACTA+GGG + Chr3:102983613-102983632 MsG0380017994.01.T01:intron 45.0%
!! AGCTTGTTAGCAGCTTGACA+AGG + Chr3:102984541-102984560 MsG0380017994.01.T01:intron 45.0%
!! CCCTCTTTGTTTGGTTTGTC+AGG + Chr3:102988058-102988077 MsG0380017994.01.T01:intron 45.0%
!! CGGCTTTAAAACTTTGCAGG+TGG + Chr3:102985088-102985107 MsG0380017994.01.T01:intron 45.0%
!! GTGCGGCTTTAAAACTTTGC+AGG + Chr3:102985085-102985104 MsG0380017994.01.T01:intron 45.0%
!! GTTTGCAAACTCTGGAATGG+AGG - Chr3:102986742-102986761 None:intergenic 45.0%
!! TAGGGTATTGTGGCTTACTC+GGG + Chr3:102989038-102989057 MsG0380017994.01.T01:CDS 45.0%
!! TGACATTGATTCTGTGCCCA+AGG + Chr3:102986602-102986621 MsG0380017994.01.T01:CDS 45.0%
!! TTTTTGGCCCTTCAATTCCC+AGG - Chr3:102985753-102985772 None:intergenic 45.0%
!!! ACCAGTTGGCTTTTTACCAG+AGG - Chr3:102986661-102986680 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAAAAGA+AGG - Chr3:102984420-102984439 None:intergenic 5.0%
!! AATATTAAGAAAATATTAAT+AGG + Chr3:102987967-102987986 MsG0380017994.01.T01:intron 5.0%
AAAACCCTAGCTTGGCCCTT+GGG + Chr3:102988628-102988647 MsG0380017994.01.T01:intron 50.0%
AAATTGGGACGGAGGGAGTA+TGG + Chr3:102983528-102983547 MsG0380017994.01.T01:intron 50.0%
AAGGTGGAGCAATGAGGTTC+AGG + Chr3:102982753-102982772 MsG0380017994.01.T01:CDS 50.0%
ACGATCACAGGTATGTAGGC+TGG - Chr3:102988687-102988706 None:intergenic 50.0%
ACTGGTGAGGCTGAAGATGA+TGG + Chr3:102987377-102987396 MsG0380017994.01.T01:CDS 50.0%
AGATGCTAGGAGATGCTCAC+AGG + Chr3:102981947-102981966 MsG0380017994.01.T01:CDS 50.0%
AGTTCCCGGATCCAATCTCT+TGG - Chr3:102988862-102988881 None:intergenic 50.0%
ATCATCTTCAGCCTCACCAG+TGG - Chr3:102987378-102987397 None:intergenic 50.0%
ATCCTAAGTCAAGGCGTGTG+AGG + Chr3:102988496-102988515 MsG0380017994.01.T01:intron 50.0%
CAATGGGGAAGTTGCTTGAG+AGG - Chr3:102984980-102984999 None:intergenic 50.0%
CACCAGGTATGCTGCAAGAT+TGG + Chr3:102982829-102982848 MsG0380017994.01.T01:intron 50.0%
CAGGAATGCATGGGAAAGCA+TGG + Chr3:102987477-102987496 MsG0380017994.01.T01:intron 50.0%
CATAGGCTCTGTCACGATTG+CGG + Chr3:102981628-102981647 MsG0380017994.01.T01:intron 50.0%
CATCACGGTAGCTGAATCTC+AGG - Chr3:102981295-102981314 None:intergenic 50.0%
CATCCACTCGCTCACAATCA+GGG - Chr3:102987504-102987523 None:intergenic 50.0%
CATGGGAATTGAAAAGGGGG+CGG + Chr3:102981887-102981906 MsG0380017994.01.T01:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr3:102988449-102988468 MsG0380017994.01.T01:intron 50.0%
CGAGTGGATGAGTATGGTCT+TGG + Chr3:102987514-102987533 MsG0380017994.01.T01:CDS 50.0%
CTATGGAATCGACACTCGAC+AGG - Chr3:102983846-102983865 None:intergenic 50.0%
CTGAGATTCAGCTACCGTGA+TGG + Chr3:102981293-102981312 MsG0380017994.01.T01:exon 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr3:102988446-102988465 None:intergenic 50.0%
CTTCGTCTCCTCTCCAATGT+TGG - Chr3:102989741-102989760 None:intergenic 50.0%
CTTGCAGAGAAGAAAGCCTC+TGG + Chr3:102986642-102986661 MsG0380017994.01.T01:CDS 50.0%
GAACGCAAGAAAGGAACAGG+AGG + Chr3:102988891-102988910 MsG0380017994.01.T01:intron 50.0%
GAGGCTTTCTTCTCTGCAAG+TGG - Chr3:102986642-102986661 None:intergenic 50.0%
GATACGACACAGCACTCGAA+TGG - Chr3:102982513-102982532 None:intergenic 50.0%
GCCTCTGGTAAAAAGCCAAC+TGG + Chr3:102986657-102986676 MsG0380017994.01.T01:CDS 50.0%
GCTTACTCGGGCATTTCGTA+TGG + Chr3:102989050-102989069 MsG0380017994.01.T01:intron 50.0%
GGAGACGAAGTCAAGAGTAG+AGG + Chr3:102989751-102989770 MsG0380017994.01.T01:intron 50.0%
GTGAGCACACTGGCAAAGTT+TGG + Chr3:102985850-102985869 MsG0380017994.01.T01:CDS 50.0%
GTGCTGTGTCGTATCACAGA+CGG + Chr3:102982518-102982537 MsG0380017994.01.T01:CDS 50.0%
GTGGCATTTGAGAAGCCTGA+GGG + Chr3:102987192-102987211 MsG0380017994.01.T01:CDS 50.0%
GTGTGGCAATGCTTCTGTTC+TGG - Chr3:102985175-102985194 None:intergenic 50.0%
TAAAACCCTAGCTTGGCCCT+TGG + Chr3:102988627-102988646 MsG0380017994.01.T01:intron 50.0%
TAACAGCTGTCAGAGGCTCT+TGG - Chr3:102988151-102988170 None:intergenic 50.0%
TCATCCACTCGCTCACAATC+AGG - Chr3:102987505-102987524 None:intergenic 50.0%
TGCTGTTCGCACCTTGAACA+AGG + Chr3:102984905-102984924 MsG0380017994.01.T01:CDS 50.0%
TGGAAGAGACTTGAGAGGCT+TGG - Chr3:102987148-102987167 None:intergenic 50.0%
TGGTCTGAGCTGAACCATGA+TGG + Chr3:102984310-102984329 MsG0380017994.01.T01:intron 50.0%
TGTGAGCGAGTGGATGAGTA+TGG + Chr3:102987508-102987527 MsG0380017994.01.T01:CDS 50.0%
TGTGCCTGAGCAAACTTCTC+TGG - Chr3:102989086-102989105 None:intergenic 50.0%
TGTGGCATTTGAGAAGCCTG+AGG + Chr3:102987191-102987210 MsG0380017994.01.T01:CDS 50.0%
TTAGGTGGTTTGAGCATGCG+TGG + Chr3:102983814-102983833 MsG0380017994.01.T01:intron 50.0%
! AGCTCCAGAGAAGTTTGCTC+AGG + Chr3:102989079-102989098 MsG0380017994.01.T01:intron 50.0%
! ATGAGTATGGTCTTGGCCCA+AGG + Chr3:102987521-102987540 MsG0380017994.01.T01:CDS 50.0%
! CAACCAAGCCTTATCCCACT+AGG - Chr3:102984103-102984122 None:intergenic 50.0%
! CACCCCTAGTCCATTGATTG+TGG - Chr3:102983619-102983638 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr3:102988452-102988471 None:intergenic 50.0%
! CCCCTAGTCCATTGATTGTG+GGG - Chr3:102983617-102983636 None:intergenic 50.0%
! GTGCTTGTGCGGTTGTCTTT+TGG + Chr3:102989968-102989987 MsG0380017994.01.T01:CDS 50.0%
! GTGGGATAAGGCTTGGTTGT+TGG + Chr3:102984104-102984123 MsG0380017994.01.T01:intron 50.0%
! TGAGTATGGTCTTGGCCCAA+GGG + Chr3:102987522-102987541 MsG0380017994.01.T01:CDS 50.0%
! TGTGGTGGGACAATTCTGCT+TGG + Chr3:102987819-102987838 MsG0380017994.01.T01:intron 50.0%
!! ATCAACAGGCACTGGGCTAA+AGG - Chr3:102984581-102984600 None:intergenic 50.0%
!! CCCCACAATCAATGGACTAG+GGG + Chr3:102983614-102983633 MsG0380017994.01.T01:intron 50.0%
!! CGAGTGTCGATTCCATAGGA+AGG + Chr3:102983848-102983867 MsG0380017994.01.T01:intron 50.0%
!! CTGTCGAGTGTCGATTCCAT+AGG + Chr3:102983844-102983863 MsG0380017994.01.T01:intron 50.0%
!!! TTTTCAGGTTGACCGACCAC+TGG + Chr3:102987359-102987378 MsG0380017994.01.T01:intron 50.0%
ACAAGTCACCTCGTCTGCAG+AGG - Chr3:102982319-102982338 None:intergenic 55.0%
ACCGCTCAATTTGTGCCAGG+AGG - Chr3:102982547-102982566 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr3:102988438-102988457 None:intergenic 55.0%
AGGCTGGGGGAGAGTAACTT+TGG - Chr3:102989269-102989288 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr3:102988437-102988456 MsG0380017994.01.T01:intron 55.0%
ATGTAGCCGATCCTGCCTAG+TGG + Chr3:102984022-102984041 MsG0380017994.01.T01:intron 55.0%
CAAGTCACCTCGTCTGCAGA+GGG - Chr3:102982318-102982337 None:intergenic 55.0%
CACAAGGCTGCAAGCCAAGA+AGG - Chr3:102987582-102987601 None:intergenic 55.0%
CACGAGTGGTTGAGCCATCA+CGG - Chr3:102981310-102981329 None:intergenic 55.0%
CATGTCCCACTAGGCAGGAT+CGG - Chr3:102984031-102984050 None:intergenic 55.0%
CCCTCCTGGCACAAATTGAG+CGG + Chr3:102982543-102982562 MsG0380017994.01.T01:CDS 55.0%
CCGCTCAATTTGTGCCAGGA+GGG - Chr3:102982546-102982565 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr3:102988444-102988463 MsG0380017994.01.T01:intron 55.0%
CGATCTCCAGATCCTCTAGC+TGG - Chr3:102987418-102987437 None:intergenic 55.0%
CTCACCCTAACCAACTGAGC+TGG + Chr3:102988521-102988540 MsG0380017994.01.T01:intron 55.0%
CTTATCCCACTAGGCGGGAT+CGG - Chr3:102984094-102984113 None:intergenic 55.0%
GAGAATGCAACAGTGAGGGC+CGG + Chr3:102985823-102985842 MsG0380017994.01.T01:CDS 55.0%
GAGGCGCGTACAACTACAGT+AGG + Chr3:102989599-102989618 MsG0380017994.01.T01:intron 55.0%
GATATCTCCCTCTGCAGACG+AGG + Chr3:102982308-102982327 MsG0380017994.01.T01:CDS 55.0%
GATGATGACCGCGACGATGA+AGG + Chr3:102981336-102981355 MsG0380017994.01.T01:CDS 55.0%
GCACGATTGCGCCTTCTCAA+AGG + Chr3:102984394-102984413 MsG0380017994.01.T01:intron 55.0%
GGCCGGCCAAACATCTTTAG+AGG + Chr3:102988274-102988293 MsG0380017994.01.T01:intron 55.0%
GGCGGTTCTTCAGGAAGCAA+GGG + Chr3:102981905-102981924 MsG0380017994.01.T01:CDS 55.0%
TATCACAGACGGAACCCTCC+TGG + Chr3:102982529-102982548 MsG0380017994.01.T01:CDS 55.0%
TCAGCTTCAGTGAGCTCCAC+AGG - Chr3:102986891-102986910 None:intergenic 55.0%
TCTTCAGCCTCACCAGTGGT+CGG - Chr3:102987374-102987393 None:intergenic 55.0%
TGAAAAGGGGGCGGTTCTTC+AGG + Chr3:102981896-102981915 MsG0380017994.01.T01:CDS 55.0%
TGCCTCACACGCCTTGACTT+AGG - Chr3:102988501-102988520 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr3:102988438-102988457 MsG0380017994.01.T01:intron 55.0%
TGTAGCCGATCCTGCCTAGT+GGG + Chr3:102984023-102984042 MsG0380017994.01.T01:intron 55.0%
! AGCCTTGTGAGGTAAGCCAG+TGG + Chr3:102987593-102987612 MsG0380017994.01.T01:intron 55.0%
! CAAGCCTTATCCCACTAGGC+GGG - Chr3:102984099-102984118 None:intergenic 55.0%
! CCAAGCCTTATCCCACTAGG+CGG - Chr3:102984100-102984119 None:intergenic 55.0%
! GCAAGTGCTGCCTTAGTCAG+TGG + Chr3:102982605-102982624 MsG0380017994.01.T01:CDS 55.0%
!! CACCACTGGCTTACCTCACA+AGG - Chr3:102987598-102987617 None:intergenic 55.0%
!! CTGAGGGAGTGCCAACACTT+GGG + Chr3:102987208-102987227 MsG0380017994.01.T01:CDS 55.0%
!! GGTATTTCTGGCCGAGTGGA+TGG - Chr3:102983596-102983615 None:intergenic 55.0%
!! TCTTGGCTTGCAGCCTTGTG+AGG + Chr3:102987582-102987601 MsG0380017994.01.T01:CDS 55.0%
AGGTTGACCGACCACTGGTG+AGG + Chr3:102987364-102987383 MsG0380017994.01.T01:intron 60.0%
ATGTAGCCGATCCCGCCTAG+TGG + Chr3:102984085-102984104 MsG0380017994.01.T01:intron 60.0%
CCGCCTAGTGGGATAAGGCT+TGG + Chr3:102984097-102984116 MsG0380017994.01.T01:intron 60.0%
CGATCCCGCCTAGTGGGATA+AGG + Chr3:102984092-102984111 MsG0380017994.01.T01:intron 60.0%
CTTCGGCCAAGCTCTCCCTT+GGG - Chr3:102987540-102987559 None:intergenic 60.0%
GGGCGGTTCTTCAGGAAGCA+AGG + Chr3:102981904-102981923 MsG0380017994.01.T01:CDS 60.0%
GGTGGTTTGAGCATGCGTGG+AGG + Chr3:102983817-102983836 MsG0380017994.01.T01:intron 60.0%
GGTTTGGGTGCTCCTCCAAG+TGG + Chr3:102986678-102986697 MsG0380017994.01.T01:CDS 60.0%
TCATCTTTCGGCGGAGGGTG+AGG - Chr3:102986277-102986296 None:intergenic 60.0%
TCTTGGCCCAAGGGAGAGCT+TGG + Chr3:102987531-102987550 MsG0380017994.01.T01:CDS 60.0%
TGCCAGTGTGCTCACAGCAC+CGG - Chr3:102985845-102985864 None:intergenic 60.0%
TGTAGCCGATCCCGCCTAGT+GGG + Chr3:102984086-102984105 MsG0380017994.01.T01:intron 60.0%
TTACCAGTCCTCAGCGCCTG+TGG + Chr3:102986872-102986891 MsG0380017994.01.T01:intron 60.0%
! GCTGTTGATGGGGGACCACT+TGG - Chr3:102986696-102986715 None:intergenic 60.0%
! GTTGATGGGGGACCACTTGG+AGG - Chr3:102986693-102986712 None:intergenic 60.0%
!! CCAAGTGTTGGCACTCCCTC+AGG - Chr3:102987210-102987229 None:intergenic 60.0%
!! CCTGAGGGAGTGCCAACACT+TGG + Chr3:102987207-102987226 MsG0380017994.01.T01:CDS 60.0%
!! GGAGGAGCACCCAAACCAGT+TGG - Chr3:102986675-102986694 None:intergenic 60.0%
!! GTGGGGTATTTCTGGCCGAG+TGG - Chr3:102983600-102983619 None:intergenic 60.0%
!! TGCACTGGGTTTGCTGCACC+AGG + Chr3:102982813-102982832 MsG0380017994.01.T01:CDS 60.0%
CTTTCGGCGGAGGGTGAGGA+GGG - Chr3:102986273-102986292 None:intergenic 65.0%
GCTTCGGCCAAGCTCTCCCT+TGG - Chr3:102987541-102987560 None:intergenic 65.0%
GGGCCCTGATTGTGAGCGAG+TGG + Chr3:102987498-102987517 MsG0380017994.01.T01:CDS 65.0%
TCTTTCGGCGGAGGGTGAGG+AGG - Chr3:102986274-102986293 None:intergenic 65.0%
TGTACTCAGGGCCGGCCCAA+GGG - Chr3:102988646-102988665 None:intergenic 65.0%
TTGTACTCAGGGCCGGCCCA+AGG - Chr3:102988647-102988666 None:intergenic 65.0%
! AGTGAGCTCCACAGGCGCTG+AGG - Chr3:102986883-102986902 None:intergenic 65.0%
! TGTGGGCTGTGCAGGTACCG+AGG + Chr3:102989883-102989902 MsG0380017994.01.T01:intron 65.0%
CCCTAGCTTGGCCCTTGGGC+CGG + Chr3:102988632-102988651 MsG0380017994.01.T01:intron 70.0%
CCGGCCCAAGGGCCAAGCTA+GGG - Chr3:102988635-102988654 None:intergenic 70.0%
!! GCTCCACAGGCGCTGAGGAC+TGG - Chr3:102986878-102986897 None:intergenic 70.0%
!! GGCCGGTGCTGTGAGCACAC+TGG + Chr3:102985840-102985859 MsG0380017994.01.T01:CDS 70.0%
GCCGGCCCAAGGGCCAAGCT+AGG - Chr3:102988636-102988655 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 102981146 102990477 102981146 ID=MsG0380017994.01;Name=MsG0380017994.01
Chr3 mRNA 102981146 102990477 102981146 ID=MsG0380017994.01.T01;Parent=MsG0380017994.01;Name=MsG0380017994.01.T01;_AED=0.31;_eAED=0.31;_QI=166|0.70|0.83|0.94|1|1|18|390|827
Chr3 exon 102981146 102981357 102981146 ID=MsG0380017994.01.T01:exon:3089;Parent=MsG0380017994.01.T01
Chr3 exon 102981871 102981968 102981871 ID=MsG0380017994.01.T01:exon:3090;Parent=MsG0380017994.01.T01
Chr3 exon 102982081 102982131 102982081 ID=MsG0380017994.01.T01:exon:3091;Parent=MsG0380017994.01.T01
Chr3 exon 102982216 102982329 102982216 ID=MsG0380017994.01.T01:exon:3092;Parent=MsG0380017994.01.T01
Chr3 exon 102982443 102982643 102982443 ID=MsG0380017994.01.T01:exon:3093;Parent=MsG0380017994.01.T01
Chr3 exon 102982733 102982834 102982733 ID=MsG0380017994.01.T01:exon:3094;Parent=MsG0380017994.01.T01
Chr3 exon 102984693 102984926 102984693 ID=MsG0380017994.01.T01:exon:3095;Parent=MsG0380017994.01.T01
Chr3 exon 102985107 102985357 102985107 ID=MsG0380017994.01.T01:exon:3096;Parent=MsG0380017994.01.T01
Chr3 exon 102985469 102985640 102985469 ID=MsG0380017994.01.T01:exon:3097;Parent=MsG0380017994.01.T01
Chr3 exon 102985739 102985894 102985739 ID=MsG0380017994.01.T01:exon:3098;Parent=MsG0380017994.01.T01
Chr3 exon 102986371 102986511 102986371 ID=MsG0380017994.01.T01:exon:3099;Parent=MsG0380017994.01.T01
Chr3 exon 102986582 102986779 102986582 ID=MsG0380017994.01.T01:exon:3100;Parent=MsG0380017994.01.T01
Chr3 exon 102986879 102987010 102986879 ID=MsG0380017994.01.T01:exon:3101;Parent=MsG0380017994.01.T01
Chr3 exon 102987093 102987266 102987093 ID=MsG0380017994.01.T01:exon:3102;Parent=MsG0380017994.01.T01
Chr3 exon 102987366 102987400 102987366 ID=MsG0380017994.01.T01:exon:3103;Parent=MsG0380017994.01.T01
Chr3 exon 102987480 102987603 102987480 ID=MsG0380017994.01.T01:exon:3104;Parent=MsG0380017994.01.T01
Chr3 exon 102989003 102989066 102989003 ID=MsG0380017994.01.T01:exon:3105;Parent=MsG0380017994.01.T01
Chr3 exon 102989897 102990477 102989897 ID=MsG0380017994.01.T01:exon:3106;Parent=MsG0380017994.01.T01
Chr3 five_prime_UTR 102981146 102981311 102981146 ID=MsG0380017994.01.T01:five_prime_utr;Parent=MsG0380017994.01.T01
Chr3 CDS 102981312 102981357 102981312 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102981871 102981968 102981871 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102982081 102982131 102982081 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102982216 102982329 102982216 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102982443 102982643 102982443 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102982733 102982834 102982733 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102984693 102984926 102984693 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102985107 102985357 102985107 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102985469 102985640 102985469 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102985739 102985894 102985739 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102986371 102986511 102986371 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102986582 102986779 102986582 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102986879 102987010 102986879 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102987093 102987266 102987093 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102987366 102987400 102987366 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102987480 102987603 102987480 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102989003 102989066 102989003 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 CDS 102989897 102990087 102989897 ID=MsG0380017994.01.T01:cds;Parent=MsG0380017994.01.T01
Chr3 three_prime_UTR 102990088 102990477 102990088 ID=MsG0380017994.01.T01:three_prime_utr;Parent=MsG0380017994.01.T01
Gene Sequence

>MsG0380017994.01.T01

ATGGCTCAACCACTCGTGAAGAAAGATGATGACCGCGACGATGAAGCTGAGTATTCCCCTTTCATGGGAATTGAAAAGGGGGCGGTTCTTCAGGAAGCAAGGGTTTTTAATGATCCACAATTAGATGCTAGGAGATGCTCACAGGTTATTACAAAGCTGCTATACCTACTGAATCAGGGAGAGACTTTTACAAAGACCGAAGCCACAGAAGTTTTCTTTGCTGTCACTAAGCTTTTCCAGTCTAAAGATATGGGATTAAGGAGAATGGTGTATCTGATGATAAAGGAGATATCTCCCTCTGCAGACGAGGTTATTATTGTCACAAGCTCTCTTATGAAGGACATGAATAGCAAGATTGATATGTATAGAGCAAATGCCATTCGAGTGCTGTGTCGTATCACAGACGGAACCCTCCTGGCACAAATTGAGCGGTATTTGAAACAAGCAATTGTAGATAAGAATCCAATTGTTGCAAGTGCTGCCTTAGTCAGTGGCATTCATCTACTACAGACAAATCCTGAAATTGTAAAAAGGTGGAGCAATGAGGTTCAGGAATCTGTTCAATCAAGAGCAGCTTTTGTACAGTTTCATGCACTGGGTTTGCTGCACCAGGTTATCTGTGAGTCAGGAAATAATACACAGTCAGGGGACCGCCCCTTCTATGATTTTCTTGAGAGTTGCCTACGTCACAAGTCAGAAATGGTGATTTTTGAAGCTGCCAGAGCTATTACAGAGCTCAATGGTGTAACAAGCCGAGAATTAAATCCAGCAATTACTGTTCTTCAGCTATTCTTAAGCTCTTCTAAGCCAGTTTTAAGATTTGCTGCTGTTCGCACCTTGAACAAGGTGGCAATGATACACCCAACATCAGTCACTAACTGCAACATTGATATGGAAAGTTTAATCTCTGACCAGAACAGAAGCATTGCCACACTTGCTATTACTACACTTTTGAAGACAGGAAATGAATCAAGTGTGGATCGTCTTATGAAACAGATTACAAATTTCATGTCTGATATTGCTGATGAGTTCAAAATCGTCGTTGTTGAAGCAATAAGATCATTGTGCCAGAAGTTCCCATTAAAATATAGATCTCTCATGAATTTCCTGAGTAACATTCTTAGGGAAGAAGGTGGTTTTGAGTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATTAGAGAAATCCCTGATGCAAAGGAAACAGGGTTACTTCATCTCTGTGAGTTCATTGAAGATTGCGAGTTCACTTATCTGTCTACGCAGATACTACACTTCCTGGGAATTGAAGGGCCAAAAACATCAGACCCTAGCAAATATATTCGTTTCATTTACAATCGAGTACATCTTGAGAATGCAACAGTGAGGGCCGGTGCTGTGAGCACACTGGCAAAGTTTGGTGCTGCAGTTGATGAGTTAAAGGTGCGTGATAGAGCAACCCTTTATCTAAACACACTTGGAGGTGATGGTTCTGTTGTTGAGACTGATAAAGCTGTAAAGGACTTCCTGTTTGGGCCATTTGATATCCCGCTTGTCAATCTGGAGACTAGTTTGAAAAATTATGAACCTTCAGAAGAGGCTTTTGACATTGATTCTGTGCCCAAGGAAGTCAAATCCCAACCACTTGCAGAGAAGAAAGCCTCTGGTAAAAAGCCAACTGGTTTGGGTGCTCCTCCAAGTGGTCCCCCATCAACAGCTGATGCATATCAGAGAGTGCTTTCCTCCATTCCAGAGTTTGCAAACTTTGGGAACCTTTTTAAGTCCTCAGCGCCTGTGGAGCTCACTGAAGCTGAGACAGAATATGCAGTTAATGTCGTTAAACACATTTTTGATAGGCATGTTGTGTTCCAGTACAACTGCACAAACACGATACCAGAGCAATTATTAGAACATGTTATCGTAATTGTGGATAATTCAGAAGCAGATGAGTTTTCAGAGGTGTTCTCCAAGCCTCTCAAGTCTCTTCCATATGATTCACCTGGACAGATTTTTGTGGCATTTGAGAAGCCTGAGGGAGTGCCAACACTTGGGAAATTTTCTAACGTTCTGAAGTTTATTGTTCGAGAGGTTGACCGACCACTGGTGAGGCTGAAGATGATGGTGAATGCATGGGAAAGCATGGGCCCTGATTGTGAGCGAGTGGATGAGTATGGTCTTGGCCCAAGGGAGAGCTTGGCCGAAGCTGTAAATACTGTCATCAACCTTCTTGGCTTGCAGCCTTGTGAGATTTCTTCATGGTCCAACAGGCCCCAAAGAAAGATTAGGGTATTGTGGCTTACTCGGGCATTTCGTACCGAGGTTGTTCCACCCAATTCAAGATCACACATGTTTGTTGTCGGTGTATTCATAGGAAATATAAAGGTGCTTGTGCGGTTGTCTTTTGGACTTGACGGTCCAAAGGATGTTGCAATGAAATTGACTGTCAGATCCGAGGATGAAACTGTCAGTGATGCCATTCATGAGATTGTGGCTAGCGGATAA
Protein sequence

>MsG0380017994.01.T01

MAQPLVKKDDDRDDEAEYSPFMGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKTEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKIDMYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPIVASAALVSGIHLLQTNPEIVKRWSNEVQESVQSRAAFVQFHALGLLHQVICESGNNTQSGDRPFYDFLESCLRHKSEMVIFEAARAITELNGVTSRELNPAITVLQLFLSSSKPVLRFAAVRTLNKVAMIHPTSVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCQKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIREIPDAKETGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRFIYNRVHLENATVRAGAVSTLAKFGAAVDELKVRDRATLYLNTLGGDGSVVETDKAVKDFLFGPFDIPLVNLETSLKNYEPSEEAFDIDSVPKEVKSQPLAEKKASGKKPTGLGAPPSGPPSTADAYQRVLSSIPEFANFGNLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLEHVIVIVDNSEADEFSEVFSKPLKSLPYDSPGQIFVAFEKPEGVPTLGKFSNVLKFIVREVDRPLVRLKMMVNAWESMGPDCERVDEYGLGPRESLAEAVNTVINLLGLQPCEISSWSNRPQRKIRVLWLTRAFRTEVVPPNSRSHMFVVGVFIGNIKVLVRLSFGLDGPKDVAMKLTVRSEDETVSDAIHEIVASG*