Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036726.01.T01 | XP_013447701.1 | 99.588 | 486 | 2 | 0 | 8 | 493 | 1 | 486 | 0 | 990 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036726.01.T01 | Q9FWA3 | 90.329 | 486 | 47 | 0 | 8 | 493 | 1 | 486 | 0 | 915 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036726.01.T01 | A0A072TX81 | 99.588 | 486 | 2 | 0 | 8 | 493 | 1 | 486 | 0.0 | 990 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080049008.01 | MsG0780036726.01 | 0.844811 | 5.999130e-59 | 9.799896e-56 |
MsG0180000466.01 | MsG0780036726.01 | 0.805027 | 1.627249e-49 | 8.518406e-47 |
MsG0180000535.01 | MsG0780036726.01 | 0.812278 | 4.594840e-51 | 2.909070e-48 |
MsG0180003497.01 | MsG0780036726.01 | 0.828178 | 1.038521e-54 | 1.024499e-51 |
MsG0180005372.01 | MsG0780036726.01 | 0.821125 | 4.767086e-53 | 3.844831e-50 |
MsG0280011106.01 | MsG0780036726.01 | 0.818905 | 1.535546e-52 | 1.164430e-49 |
MsG0380013843.01 | MsG0780036726.01 | 0.834538 | 2.829479e-56 | 3.368062e-53 |
MsG0680031795.01 | MsG0780036726.01 | 0.821590 | 3.723270e-53 | 3.041887e-50 |
MsG0480022543.01 | MsG0780036726.01 | 0.814782 | 1.293009e-51 | 8.756587e-49 |
MsG0480022923.01 | MsG0780036726.01 | 0.820977 | 5.156917e-53 | 4.142416e-50 |
MsG0580024591.01 | MsG0780036726.01 | 0.825733 | 3.991107e-54 | 3.668586e-51 |
MsG0380016183.01 | MsG0780036726.01 | 0.811003 | 8.698197e-51 | 5.323504e-48 |
MsG0380016717.01 | MsG0780036726.01 | 0.802163 | 6.390569e-49 | 3.108572e-46 |
MsG0380017994.01 | MsG0780036726.01 | 0.800237 | 1.583964e-48 | 7.337737e-46 |
MsG0680030296.01 | MsG0780036726.01 | 0.817775 | 2.768486e-52 | 2.034908e-49 |
MsG0680030613.01 | MsG0780036726.01 | 0.803966 | 2.709157e-49 | 1.380023e-46 |
MsG0280007054.01 | MsG0780036726.01 | 0.803642 | 3.163053e-49 | 1.597836e-46 |
MsG0280009749.01 | MsG0780036726.01 | 0.815571 | 8.633552e-52 | 5.974282e-49 |
MsG0780035919.01 | MsG0780036726.01 | 0.850178 | 2.009146e-60 | 3.902126e-57 |
MsG0780036726.01 | MsG0780038395.01 | 0.805326 | 1.409191e-49 | 7.433884e-47 |
MsG0780036726.01 | MsG0780039234.01 | 0.808697 | 2.726358e-50 | 1.569366e-47 |
MsG0780036726.01 | MsG0780039619.01 | 0.818304 | 2.101545e-52 | 1.567274e-49 |
MsG0780036726.01 | MsG0880043669.01 | 0.815435 | 9.256867e-52 | 6.381727e-49 |
MsG0780036726.01 | MsG0880044342.01 | 0.849547 | 3.015946e-60 | 5.736710e-57 |
MsG0780036726.01 | MsG0880045949.01 | 0.812789 | 3.552082e-51 | 2.279297e-48 |
MsG0780036726.01 | MsG0880045963.01 | 0.800691 | 1.279860e-48 | 5.997595e-46 |
MsG0780036726.01 | MsG0880046080.01 | 0.824162 | 9.371123e-54 | 8.235611e-51 |
MsG0780036726.01 | MsG0880047084.01 | 0.822589 | 2.184601e-53 | 1.836632e-50 |
MsG0780036726.01 | MsG0880047085.01 | 0.841603 | 4.298161e-58 | 6.348631e-55 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0780036726.01 | MsG0480023662.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036726.01.T01 | MTR_7g017900 | 99.588 | 486 | 2 | 0 | 8 | 493 | 1 | 486 | 0.0 | 990 |
MsG0780036726.01.T01 | MTR_8g099185 | 76.132 | 486 | 112 | 2 | 9 | 491 | 3 | 487 | 0.0 | 768 |
MsG0780036726.01.T01 | MTR_6g016385 | 60.156 | 128 | 25 | 2 | 13 | 140 | 7 | 108 | 6.78e-40 | 141 |
MsG0780036726.01.T01 | MTR_6g016385 | 79.412 | 34 | 7 | 0 | 459 | 492 | 107 | 140 | 5.86e-14 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036726.01.T01 | AT3G02360 | 90.329 | 486 | 47 | 0 | 8 | 493 | 1 | 486 | 0.0 | 915 |
MsG0780036726.01.T01 | AT3G02360 | 90.329 | 486 | 47 | 0 | 8 | 493 | 1 | 486 | 0.0 | 915 |
MsG0780036726.01.T01 | AT5G41670 | 76.398 | 483 | 111 | 2 | 12 | 492 | 6 | 487 | 0.0 | 764 |
MsG0780036726.01.T01 | AT5G41670 | 76.398 | 483 | 111 | 2 | 12 | 492 | 6 | 487 | 0.0 | 764 |
MsG0780036726.01.T01 | AT5G41670 | 76.398 | 483 | 111 | 2 | 12 | 492 | 6 | 487 | 0.0 | 764 |
MsG0780036726.01.T01 | AT5G41670 | 76.398 | 483 | 111 | 2 | 12 | 492 | 6 | 487 | 0.0 | 764 |
MsG0780036726.01.T01 | AT1G64190 | 75.569 | 483 | 115 | 2 | 12 | 492 | 6 | 487 | 0.0 | 757 |
Find 154 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCTATTATAAACAGAAAT+TGG | 0.139869 | 7:-12534337 | None:intergenic |
TACCTTGGAATGGGAGTTTC+AGG | 0.189451 | 7:+12534628 | MsG0780036726.01.T01:CDS |
GGAAAGGTTGCCGGCTAATT+TGG | 0.207277 | 7:+12535581 | MsG0780036726.01.T01:CDS |
CTACTTAATTACTTGGCTTT+TGG | 0.216834 | 7:+12535830 | MsG0780036726.01.T01:three_prime_UTR |
CACCGTATTCAATTCCATTA+TGG | 0.242886 | 7:-12534819 | None:intergenic |
CAATATTGAGTGCGAGATTC+TGG | 0.243421 | 7:-12534300 | None:intergenic |
GTTTCCCTTGCTGTCAATTC+AGG | 0.244147 | 7:+12535504 | MsG0780036726.01.T01:CDS |
CCTTGCCGGATTGGCTGTTA+TGG | 0.248676 | 7:+12534276 | MsG0780036726.01.T01:CDS |
CATCATTAGAGCTATATTCT+TGG | 0.260300 | 7:+12535374 | MsG0780036726.01.T01:CDS |
TGGGTGAACTTGCCCGTATT+TGG | 0.284562 | 7:+12535340 | MsG0780036726.01.T01:CDS |
TGCTGAAAAGGGTTGGGATT+TGG | 0.297537 | 7:+12535314 | MsG0780036726.01.T01:CDS |
CAAGAAGGTTTGCGAGATTA+GGG | 0.307395 | 7:-12535425 | None:intergenic |
GTCTTTAAATCAGGTGGCTT+TGG | 0.315363 | 7:+12535171 | MsG0780036726.01.T01:CDS |
CTATCTGCGTACCTTGAAAA+AGG | 0.318252 | 7:+12534523 | MsG0780036726.01.T01:CDS |
GACTTTACTACATGAATTCA+TGG | 0.328695 | 7:+12533555 | None:intergenic |
CTTGCCGGATTGGCTGTTAT+GGG | 0.330078 | 7:+12534277 | MsG0780036726.01.T01:CDS |
ATGGAATTAACAAAGGCTTC+AGG | 0.332890 | 7:-12534433 | None:intergenic |
AAGGGTTGGGATTTGGCATT+GGG | 0.347851 | 7:+12535321 | MsG0780036726.01.T01:CDS |
AGAGAAAGAGGTAGCCGAAT+TGG | 0.349672 | 7:+12534597 | MsG0780036726.01.T01:CDS |
ATTGAACAGGAAATACATTA+TGG | 0.355144 | 7:+12534231 | MsG0780036726.01.T01:intron |
TTTCGGAATTAAGGATGATA+AGG | 0.363767 | 7:+12534978 | MsG0780036726.01.T01:CDS |
ACAAGAAGGTTTGCGAGATT+AGG | 0.369170 | 7:-12535426 | None:intergenic |
ATTATTTCCTTTGCGAACTC+TGG | 0.371448 | 7:-12535453 | None:intergenic |
TTCTGTACTACTTAATTACT+TGG | 0.375693 | 7:+12535823 | MsG0780036726.01.T01:three_prime_UTR |
TTCTATTATAAACAGAAATT+GGG | 0.377785 | 7:-12534336 | None:intergenic |
CCGTGCAAAGAGTGCTGAAA+AGG | 0.383625 | 7:+12535302 | MsG0780036726.01.T01:CDS |
CAAAGATACAACACAATTGT+TGG | 0.388706 | 7:-12535857 | None:intergenic |
ACTGCTTCTTGTCTACTTGT+TGG | 0.389341 | 7:-12535209 | None:intergenic |
TCCCACCATTGAAGCTTCAT+TGG | 0.392542 | 7:+12535098 | MsG0780036726.01.T01:CDS |
AACTGTGGAACGAGCAAAAC+AGG | 0.393686 | 7:+12534378 | MsG0780036726.01.T01:CDS |
TGCAACCTCCTTTCCAAATA+CGG | 0.408707 | 7:-12535353 | None:intergenic |
CTTACAAGAATAGGCCTTGC+CGG | 0.413659 | 7:+12534262 | MsG0780036726.01.T01:CDS |
GACAAGGTTCTTGACAAAAC+TGG | 0.414137 | 7:+12535018 | MsG0780036726.01.T01:CDS |
GGCCCTTGTGTGACATATAT+CGG | 0.416337 | 7:+12534763 | MsG0780036726.01.T01:CDS |
TTCGGAATTAAGGATGATAA+GGG | 0.420984 | 7:+12534979 | MsG0780036726.01.T01:CDS |
CTAAAATGACATTGTGAAGT+TGG | 0.423325 | 7:-12535912 | None:intergenic |
TTGGATGCTAGGTTCCTTAG+TGG | 0.423522 | 7:+12535117 | MsG0780036726.01.T01:CDS |
TTATAGAAGGGAAAGGTTGC+CGG | 0.423946 | 7:+12535572 | MsG0780036726.01.T01:CDS |
CAAGCTTGAACCATTCAGTA+TGG | 0.426034 | 7:-12535668 | None:intergenic |
TTGCTGAACAGTCCACTTAC+CGG | 0.427561 | 7:-12535052 | None:intergenic |
GGTCTTCTCTACCTTGGAAT+GGG | 0.431626 | 7:+12534619 | MsG0780036726.01.T01:CDS |
GAGGGAAATCTTCCACTCTA+TGG | 0.435417 | 7:+12534400 | MsG0780036726.01.T01:CDS |
GAGAAAGAGGTAGCCGAATT+GGG | 0.438526 | 7:+12534598 | MsG0780036726.01.T01:CDS |
CAACTCTCCTCCATGCGGTT+TGG | 0.440064 | 7:-12535482 | None:intergenic |
TTGAAGCTTCATTGGATGCT+AGG | 0.440720 | 7:+12535106 | MsG0780036726.01.T01:CDS |
AAAGGGTTGGGATTTGGCAT+TGG | 0.442965 | 7:+12535320 | MsG0780036726.01.T01:CDS |
GGTGATTATAATGCTTGTTA+AGG | 0.444484 | 7:+12534468 | MsG0780036726.01.T01:CDS |
TAGGTTCCTTAGTGGGTTGA+AGG | 0.445330 | 7:+12535125 | MsG0780036726.01.T01:CDS |
AAGAATAGGCCTTGCCGGAT+TGG | 0.447633 | 7:+12534267 | MsG0780036726.01.T01:CDS |
AGCAGTTGATTGATGATGTT+AGG | 0.448773 | 7:+12535226 | MsG0780036726.01.T01:CDS |
TTTGTGAAGATGATCCATAA+TGG | 0.453566 | 7:+12534805 | MsG0780036726.01.T01:CDS |
AAGGTAGAGAAGACCCAATT+CGG | 0.453670 | 7:-12534611 | None:intergenic |
GCTCCACCACTTACAAGAAT+AGG | 0.453999 | 7:+12534253 | MsG0780036726.01.T01:CDS |
GAACCACCAGGCATCATAGA+AGG | 0.462700 | 7:-12534676 | None:intergenic |
GCTGCAAAGGTCTTTAAATC+AGG | 0.464980 | 7:+12535162 | MsG0780036726.01.T01:CDS |
TGGAATTAACAAAGGCTTCA+GGG | 0.466573 | 7:-12534432 | None:intergenic |
CTGGCCCATAACAGCCAATC+CGG | 0.466590 | 7:-12534281 | None:intergenic |
TACGATGTGTTGAAGTCAGT+TGG | 0.471682 | 7:+12534865 | MsG0780036726.01.T01:CDS |
TATATCGGTAAAGGTGGATC+TGG | 0.477211 | 7:+12534778 | MsG0780036726.01.T01:CDS |
TTTCATCCTTCAACCCACTA+AGG | 0.479425 | 7:-12535131 | None:intergenic |
ATATGAAAGGGTTGATATTG+AGG | 0.481626 | 7:+12535638 | MsG0780036726.01.T01:CDS |
ACACAAATCAACAGTGCTAA+AGG | 0.484730 | 7:-12535957 | None:intergenic |
GGGTCTTCTCTACCTTGGAA+TGG | 0.486100 | 7:+12534618 | MsG0780036726.01.T01:CDS |
CTTCTTGTCTACTTGTTGGT+CGG | 0.486709 | 7:-12535205 | None:intergenic |
CGTGGTCCTTCTATGATGCC+TGG | 0.487938 | 7:+12534670 | MsG0780036726.01.T01:CDS |
TATGAAAGGGTTGATATTGA+GGG | 0.490021 | 7:+12535639 | MsG0780036726.01.T01:CDS |
CACTGAGAGACGAGAGAAAG+AGG | 0.490025 | 7:+12534585 | MsG0780036726.01.T01:CDS |
TGGATGCTAGGTTCCTTAGT+GGG | 0.492993 | 7:+12535118 | MsG0780036726.01.T01:CDS |
GTCACACAAGGGCCACTGTC+AGG | 0.495948 | 7:-12534754 | None:intergenic |
CGAACTCTGGATCCACAAGA+AGG | 0.497023 | 7:-12535440 | None:intergenic |
ATCCATAATGGAATTGAATA+CGG | 0.497738 | 7:+12534817 | MsG0780036726.01.T01:CDS |
GCAAGACTAGCAGACATACC+TGG | 0.499975 | 7:-12535537 | None:intergenic |
TTGTGCGTAACTACAAATCT+TGG | 0.500074 | 7:-12535265 | None:intergenic |
AGCATCCAATGAAGCTTCAA+TGG | 0.501028 | 7:-12535103 | None:intergenic |
TAACAAAGGCTTCAGGGTCA+TGG | 0.503865 | 7:-12534426 | None:intergenic |
GCATGAAGGGTACCGGTAAG+TGG | 0.504450 | 7:+12535040 | MsG0780036726.01.T01:CDS |
GGGAGTTTCAGGTGGTGAGG+AGG | 0.505582 | 7:+12534639 | MsG0780036726.01.T01:CDS |
ATTATAATGCTTGTTAAGGC+TGG | 0.506000 | 7:+12534472 | MsG0780036726.01.T01:CDS |
TATCTGCAGTGATTTCAATC+AGG | 0.506816 | 7:-12534954 | None:intergenic |
AATCTAAATCCTCGACTGCT+TGG | 0.508904 | 7:-12535691 | None:intergenic |
GAAGCTTCAATGGTGGGAGC+AGG | 0.512419 | 7:-12535093 | None:intergenic |
ACAAGCATTATAATCACCCT+TGG | 0.516618 | 7:-12534463 | None:intergenic |
AGAAATTGGGAATCCTTTGT+CGG | 0.517135 | 7:-12534323 | None:intergenic |
CAAAGAGTGCTGAAAAGGGT+TGG | 0.524165 | 7:+12535307 | MsG0780036726.01.T01:CDS |
AAAGAGTGCTGAAAAGGGTT+GGG | 0.525150 | 7:+12535308 | MsG0780036726.01.T01:CDS |
AAAGGTGATTGTATAATTGA+TGG | 0.526658 | 7:+12534541 | MsG0780036726.01.T01:CDS |
TACAAAGTGCATTTACTGAA+TGG | 0.533006 | 7:+12534908 | MsG0780036726.01.T01:CDS |
TCTTGACAAAACTGGCATGA+AGG | 0.534900 | 7:+12535026 | MsG0780036726.01.T01:CDS |
GCAACCTCCTTTCCAAATAC+GGG | 0.541541 | 7:-12535352 | None:intergenic |
GGAGTTTCAGGTGGTGAGGA+GGG | 0.541582 | 7:+12534640 | MsG0780036726.01.T01:CDS |
CGGTGCTCATACATATGAAA+GGG | 0.541779 | 7:+12535626 | MsG0780036726.01.T01:CDS |
TGAGCTTGCACCAAATTAGC+CGG | 0.541967 | 7:-12535591 | None:intergenic |
ATTAAGGATGATAAGGGTGA+TGG | 0.545330 | 7:+12534985 | MsG0780036726.01.T01:CDS |
AGTAATTAAGTAGTACAGAA+TGG | 0.548326 | 7:-12535820 | None:intergenic |
CTTGCCCGTATTTGGAAAGG+AGG | 0.551632 | 7:+12535348 | MsG0780036726.01.T01:CDS |
TTGACAGTTATAGAAGGGAA+AGG | 0.551641 | 7:+12535565 | MsG0780036726.01.T01:CDS |
TGCATTTACTGAATGGAACA+AGG | 0.553429 | 7:+12534915 | MsG0780036726.01.T01:CDS |
GTTGATTGATGATGTTAGGA+AGG | 0.556771 | 7:+12535230 | MsG0780036726.01.T01:CDS |
AATTCAGGTATCAGCCTCCC+AGG | 0.557285 | 7:+12535519 | MsG0780036726.01.T01:CDS |
CTTGACAAAACTGGCATGAA+GGG | 0.558082 | 7:+12535027 | MsG0780036726.01.T01:CDS |
TCCAATGAAGCTTCAATGGT+GGG | 0.558924 | 7:-12535099 | None:intergenic |
GCAAGGCCTATTCTTGTAAG+TGG | 0.559312 | 7:-12534259 | None:intergenic |
TCGGTGCTCATACATATGAA+AGG | 0.559998 | 7:+12535625 | MsG0780036726.01.T01:CDS |
CATAGAAGATATTCTTCTCA+AGG | 0.561734 | 7:+12534717 | MsG0780036726.01.T01:CDS |
GAATTGGGTCTTCTCTACCT+TGG | 0.565856 | 7:+12534613 | MsG0780036726.01.T01:CDS |
TGAAAGAGTTGAAGCTGCAA+AGG | 0.567324 | 7:+12535149 | MsG0780036726.01.T01:CDS |
TGTGTGACATATATCGGTAA+AGG | 0.571691 | 7:+12534769 | MsG0780036726.01.T01:CDS |
CGTGCAAAGAGTGCTGAAAA+GGG | 0.574705 | 7:+12535303 | MsG0780036726.01.T01:CDS |
AGGGGTCGTACCATACTGAA+TGG | 0.576450 | 7:+12535658 | MsG0780036726.01.T01:CDS |
GAACTTGCCCGTATTTGGAA+AGG | 0.578020 | 7:+12535345 | MsG0780036726.01.T01:CDS |
TAATTGAACGCCAAACCGCA+TGG | 0.578480 | 7:+12535472 | MsG0780036726.01.T01:CDS |
TCAAGCTTGCCAAGCAGTCG+AGG | 0.580468 | 7:+12535682 | MsG0780036726.01.T01:CDS |
TAATCTCGCAAACCTTCTTG+TGG | 0.581067 | 7:+12535428 | MsG0780036726.01.T01:CDS |
GCAAAGGTCTTTAAATCAGG+TGG | 0.585495 | 7:+12535165 | MsG0780036726.01.T01:CDS |
AGGCCTATTCTTGTAAGTGG+TGG | 0.590050 | 7:-12534256 | None:intergenic |
GCTGCTCAAGTTCCTGACAG+TGG | 0.590431 | 7:+12534742 | MsG0780036726.01.T01:CDS |
AATGGGAGTTTCAGGTGGTG+AGG | 0.590829 | 7:+12534636 | MsG0780036726.01.T01:CDS |
AAAACTGGCATGAAGGGTAC+CGG | 0.594886 | 7:+12535033 | MsG0780036726.01.T01:CDS |
ATTCTTGGACAGAATCAAGC+AGG | 0.597412 | 7:+12535389 | MsG0780036726.01.T01:CDS |
CACCTGAAACTCCCATTCCA+AGG | 0.599138 | 7:-12534630 | None:intergenic |
CCATAACAGCCAATCCGGCA+AGG | 0.605015 | 7:-12534276 | None:intergenic |
TAATTGATGGTGGTAATGAA+TGG | 0.607569 | 7:+12534554 | MsG0780036726.01.T01:CDS |
AGTTGGAAAGTTGACAAATG+AGG | 0.611447 | 7:+12534882 | MsG0780036726.01.T01:CDS |
TGATGGATATCTTGTTGACA+AGG | 0.611880 | 7:+12535002 | MsG0780036726.01.T01:CDS |
ATCCAATGAAGCTTCAATGG+TGG | 0.615367 | 7:-12535100 | None:intergenic |
AAGATTTGTAGTTACGCACA+AGG | 0.615576 | 7:+12535267 | MsG0780036726.01.T01:CDS |
GCACTCAATATTGCCGACAA+AGG | 0.616233 | 7:+12534310 | MsG0780036726.01.T01:CDS |
GGGTCATGGAAGCCATAGAG+TGG | 0.618863 | 7:-12534412 | None:intergenic |
GTGACATATATCGGTAAAGG+TGG | 0.619452 | 7:+12534772 | MsG0780036726.01.T01:CDS |
CAAGACTAGCAGACATACCT+GGG | 0.620097 | 7:-12535536 | None:intergenic |
CAAGCTCAACGAGACTACTT+CGG | 0.620254 | 7:+12535606 | MsG0780036726.01.T01:CDS |
TTATAATAGAACAACATCAA+AGG | 0.629315 | 7:+12534348 | MsG0780036726.01.T01:CDS |
TAAGCTTCAAACGAACCACC+AGG | 0.631829 | 7:-12534688 | None:intergenic |
TTACCGATATATGTCACACA+AGG | 0.634961 | 7:-12534766 | None:intergenic |
ATCAAAGGTTGACGAAACTG+TGG | 0.637444 | 7:+12534363 | MsG0780036726.01.T01:CDS |
GGTGAGGAGGGTGCTCGACG+TGG | 0.639370 | 7:+12534652 | MsG0780036726.01.T01:CDS |
CTTGGAATGGGAGTTTCAGG+TGG | 0.640131 | 7:+12534631 | MsG0780036726.01.T01:CDS |
GGTGATTGTATAATTGATGG+TGG | 0.642834 | 7:+12534544 | MsG0780036726.01.T01:CDS |
TGATACCTGAATTGACAGCA+AGG | 0.655801 | 7:-12535509 | None:intergenic |
ATGAAAGGGTTGATATTGAG+GGG | 0.658254 | 7:+12535640 | MsG0780036726.01.T01:CDS |
TGACATGCAGCTGATTGCTG+AGG | 0.672441 | 7:+12534840 | MsG0780036726.01.T01:CDS |
AGATTTGTAGTTACGCACAA+GGG | 0.672756 | 7:+12535268 | MsG0780036726.01.T01:CDS |
GCATTTACTGAATGGAACAA+GGG | 0.675899 | 7:+12534916 | MsG0780036726.01.T01:CDS |
TGTGGATCCAGAGTTCGCAA+AGG | 0.685226 | 7:+12535446 | MsG0780036726.01.T01:CDS |
AGAAGATATTCTTCTCAAGG+TGG | 0.687222 | 7:+12534720 | MsG0780036726.01.T01:CDS |
GATACCTGAATTGACAGCAA+GGG | 0.692333 | 7:-12535508 | None:intergenic |
TGTGGAACGAGCAAAACAGG+AGG | 0.698308 | 7:+12534381 | MsG0780036726.01.T01:CDS |
GTGGAACGAGCAAAACAGGA+GGG | 0.702013 | 7:+12534382 | MsG0780036726.01.T01:CDS |
TACCGATATATGTCACACAA+GGG | 0.718767 | 7:-12534765 | None:intergenic |
GGAAACAACTCTCCTCCATG+CGG | 0.720527 | 7:-12535487 | None:intergenic |
TTGAACGCCAAACCGCATGG+AGG | 0.736744 | 7:+12535475 | MsG0780036726.01.T01:CDS |
GACTAGCAGACATACCTGGG+AGG | 0.738307 | 7:-12535533 | None:intergenic |
GGTCCTTCTATGATGCCTGG+TGG | 0.748041 | 7:+12534673 | MsG0780036726.01.T01:CDS |
GAGCTTACATAGCTGCAATG+CGG | 0.748751 | 7:+12535782 | MsG0780036726.01.T01:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTATTTTTTATAAAA+CGG | + | Chr7:12533638-12533657 | MsG0780036726.01.T01:intron | 0.0% |
!! | TAAAAAACATTACATTTATT+AGG | - | Chr7:12535741-12535760 | None:intergenic | 10.0% |
!! | TTCTATTATAAACAGAAATT+GGG | - | Chr7:12534339-12534358 | None:intergenic | 15.0% |
!!! | TCATTTTAGTTTTCATATTT+TGG | + | Chr7:12535926-12535945 | MsG0780036726.01.T01:three_prime_UTR | 15.0% |
!! | GTTCTATTATAAACAGAAAT+TGG | - | Chr7:12534340-12534359 | None:intergenic | 20.0% |
!! | TTATAATAGAACAACATCAA+AGG | + | Chr7:12534348-12534367 | MsG0780036726.01.T01:CDS | 20.0% |
!! | TTTATAAGAGCAAATGAATT+CGG | - | Chr7:12534201-12534220 | None:intergenic | 20.0% |
!!! | ATATTTTGACAGTTATAGAA+GGG | + | Chr7:12535560-12535579 | MsG0780036726.01.T01:CDS | 20.0% |
!!! | CTTTTTATGTCTATATATCT+TGG | + | Chr7:12534027-12534046 | MsG0780036726.01.T01:intron | 20.0% |
!!! | TCTAATGTCGTTTTAATTTA+TGG | + | Chr7:12534157-12534176 | MsG0780036726.01.T01:intron | 20.0% |
!!! | TTTGTTAATCACTCTTTTTA+GGG | + | Chr7:12533983-12534002 | MsG0780036726.01.T01:intron | 20.0% |
!!! | TTTTGTTAATCACTCTTTTT+AGG | + | Chr7:12533982-12534001 | MsG0780036726.01.T01:intron | 20.0% |
!!! | TTTTTGAATGGAATTAACAA+AGG | - | Chr7:12534443-12534462 | None:intergenic | 20.0% |
! | AAACATATCAATCATTGAAC+AGG | + | Chr7:12534218-12534237 | MsG0780036726.01.T01:intron | 25.0% |
! | AAAGGTGATTGTATAATTGA+TGG | + | Chr7:12534541-12534560 | MsG0780036726.01.T01:CDS | 25.0% |
! | AGTAATTAAGTAGTACAGAA+TGG | - | Chr7:12535823-12535842 | None:intergenic | 25.0% |
! | ATTGAACAGGAAATACATTA+TGG | + | Chr7:12534231-12534250 | MsG0780036726.01.T01:intron | 25.0% |
! | CTTCATTAGTTCAAAAAGAT+TGG | - | Chr7:12533879-12533898 | None:intergenic | 25.0% |
! | GCAATTGCATTCTTTATTAT+TGG | + | Chr7:12534119-12534138 | MsG0780036726.01.T01:intron | 25.0% |
! | TAATTCCATTCAAAAACCAA+GGG | + | Chr7:12534447-12534466 | MsG0780036726.01.T01:CDS | 25.0% |
! | TACAATCCAAAACAACATTT+AGG | - | Chr7:12533711-12533730 | None:intergenic | 25.0% |
! | TCCAATAATAAAGAATGCAA+GGG | - | Chr7:12534072-12534091 | None:intergenic | 25.0% |
! | TTAATTCCATTCAAAAACCA+AGG | + | Chr7:12534446-12534465 | MsG0780036726.01.T01:CDS | 25.0% |
! | TTCCAATAATAAAGAATGCA+AGG | - | Chr7:12534073-12534092 | None:intergenic | 25.0% |
! | TTCTGTACTACTTAATTACT+TGG | + | Chr7:12535823-12535842 | MsG0780036726.01.T01:three_prime_UTR | 25.0% |
! | TTGGATTGTAATTCTACTAT+TGG | + | Chr7:12533721-12533740 | MsG0780036726.01.T01:intron | 25.0% |
!! | ATCCATAATGGAATTGAATA+CGG | + | Chr7:12534817-12534836 | MsG0780036726.01.T01:CDS | 25.0% |
!!! | ACTCTTTTTAGGGTAAAATT+AGG | + | Chr7:12533993-12534012 | MsG0780036726.01.T01:intron | 25.0% |
!!! | CATATTTTGACAGTTATAGA+AGG | + | Chr7:12535559-12535578 | MsG0780036726.01.T01:CDS | 25.0% |
!!! | CTCTTTTTAGGGTAAAATTA+GGG | + | Chr7:12533994-12534013 | MsG0780036726.01.T01:intron | 25.0% |
!!! | TTATACAATCACCTTTTTCA+AGG | - | Chr7:12534537-12534556 | None:intergenic | 25.0% |
CAAAGATACAACACAATTGT+TGG | - | Chr7:12535860-12535879 | None:intergenic | 30.0% | |
CATAGAAGATATTCTTCTCA+AGG | + | Chr7:12534717-12534736 | MsG0780036726.01.T01:CDS | 30.0% | |
CATCATTAGAGCTATATTCT+TGG | + | Chr7:12535374-12535393 | MsG0780036726.01.T01:CDS | 30.0% | |
CTAAAATGACATTGTGAAGT+TGG | - | Chr7:12535915-12535934 | None:intergenic | 30.0% | |
GTGTTAGATCTTGTTAAACT+TGG | + | Chr7:12533662-12533681 | MsG0780036726.01.T01:intron | 30.0% | |
TACAAAGTGCATTTACTGAA+TGG | + | Chr7:12534908-12534927 | MsG0780036726.01.T01:CDS | 30.0% | |
TCCCTTGCATTCTTTATTAT+TGG | + | Chr7:12534068-12534087 | MsG0780036726.01.T01:intron | 30.0% | |
TGATTAACAAAATGATCCCA+TGG | - | Chr7:12533974-12533993 | None:intergenic | 30.0% | |
TGCTTGATCTGTGAAAATTT+AGG | + | Chr7:12533807-12533826 | MsG0780036726.01.T01:intron | 30.0% | |
TTCGGAATTAAGGATGATAA+GGG | + | Chr7:12534979-12534998 | MsG0780036726.01.T01:CDS | 30.0% | |
TTTCGGAATTAAGGATGATA+AGG | + | Chr7:12534978-12534997 | MsG0780036726.01.T01:CDS | 30.0% | |
TTTGTGAAGATGATCCATAA+TGG | + | Chr7:12534805-12534824 | MsG0780036726.01.T01:CDS | 30.0% | |
! | AATTTTCACAGATCAAGCAA+CGG | - | Chr7:12533806-12533825 | None:intergenic | 30.0% |
! | ATTATAATGCTTGTTAAGGC+TGG | + | Chr7:12534472-12534491 | MsG0780036726.01.T01:CDS | 30.0% |
! | GAAATCACTGCAGATATTTT+CGG | + | Chr7:12534961-12534980 | MsG0780036726.01.T01:CDS | 30.0% |
! | GGTGATTATAATGCTTGTTA+AGG | + | Chr7:12534468-12534487 | MsG0780036726.01.T01:CDS | 30.0% |
! | TGCAGATATTTTCGGAATTA+AGG | + | Chr7:12534969-12534988 | MsG0780036726.01.T01:CDS | 30.0% |
!! | ATATGAAAGGGTTGATATTG+AGG | + | Chr7:12535638-12535657 | MsG0780036726.01.T01:CDS | 30.0% |
!! | CTACTTAATTACTTGGCTTT+TGG | + | Chr7:12535830-12535849 | MsG0780036726.01.T01:three_prime_UTR | 30.0% |
!! | TAATTGATGGTGGTAATGAA+TGG | + | Chr7:12534554-12534573 | MsG0780036726.01.T01:CDS | 30.0% |
!! | TATGAAAGGGTTGATATTGA+GGG | + | Chr7:12535639-12535658 | MsG0780036726.01.T01:CDS | 30.0% |
!!! | CATTTTTTGAGTTTTTGTCG+AGG | + | Chr7:12533771-12533790 | MsG0780036726.01.T01:intron | 30.0% |
AACCTGCACAAATATCAAAC+AGG | - | Chr7:12533844-12533863 | None:intergenic | 35.0% | |
AAGATTTGTAGTTACGCACA+AGG | + | Chr7:12535267-12535286 | MsG0780036726.01.T01:CDS | 35.0% | |
AATTCATGGTGAGATGTGAT+TGG | + | Chr7:12533569-12533588 | MsG0780036726.01.T01:intron | 35.0% | |
ACAAGCATTATAATCACCCT+TGG | - | Chr7:12534466-12534485 | None:intergenic | 35.0% | |
ACACAAATCAACAGTGCTAA+AGG | - | Chr7:12535960-12535979 | None:intergenic | 35.0% | |
AGAAATTGGGAATCCTTTGT+CGG | - | Chr7:12534326-12534345 | None:intergenic | 35.0% | |
AGAAGATATTCTTCTCAAGG+TGG | + | Chr7:12534720-12534739 | MsG0780036726.01.T01:CDS | 35.0% | |
AGATTTGTAGTTACGCACAA+GGG | + | Chr7:12535268-12535287 | MsG0780036726.01.T01:CDS | 35.0% | |
AGTTGGAAAGTTGACAAATG+AGG | + | Chr7:12534882-12534901 | MsG0780036726.01.T01:CDS | 35.0% | |
ATGGAATTAACAAAGGCTTC+AGG | - | Chr7:12534436-12534455 | None:intergenic | 35.0% | |
ATTAAGGATGATAAGGGTGA+TGG | + | Chr7:12534985-12535004 | MsG0780036726.01.T01:CDS | 35.0% | |
ATTATTTCCTTTGCGAACTC+TGG | - | Chr7:12535456-12535475 | None:intergenic | 35.0% | |
CACCGTATTCAATTCCATTA+TGG | - | Chr7:12534822-12534841 | None:intergenic | 35.0% | |
GCATTTACTGAATGGAACAA+GGG | + | Chr7:12534916-12534935 | MsG0780036726.01.T01:CDS | 35.0% | |
GGTGATTGTATAATTGATGG+TGG | + | Chr7:12534544-12534563 | MsG0780036726.01.T01:CDS | 35.0% | |
TACCGATATATGTCACACAA+GGG | - | Chr7:12534768-12534787 | None:intergenic | 35.0% | |
TATCTGCAGTGATTTCAATC+AGG | - | Chr7:12534957-12534976 | None:intergenic | 35.0% | |
TGCATTTACTGAATGGAACA+AGG | + | Chr7:12534915-12534934 | MsG0780036726.01.T01:CDS | 35.0% | |
TGGAATTAACAAAGGCTTCA+GGG | - | Chr7:12534435-12534454 | None:intergenic | 35.0% | |
TGTGTGACATATATCGGTAA+AGG | + | Chr7:12534769-12534788 | MsG0780036726.01.T01:CDS | 35.0% | |
TTACCGATATATGTCACACA+AGG | - | Chr7:12534769-12534788 | None:intergenic | 35.0% | |
TTCTGTACTATGATGACCAT+GGG | + | Chr7:12533955-12533974 | MsG0780036726.01.T01:intron | 35.0% | |
TTGACAGTTATAGAAGGGAA+AGG | + | Chr7:12535565-12535584 | MsG0780036726.01.T01:CDS | 35.0% | |
TTGTGCGTAACTACAAATCT+TGG | - | Chr7:12535268-12535287 | None:intergenic | 35.0% | |
TTTCTGTACTATGATGACCA+TGG | + | Chr7:12533954-12533973 | MsG0780036726.01.T01:intron | 35.0% | |
! | TGATGGATATCTTGTTGACA+AGG | + | Chr7:12535002-12535021 | MsG0780036726.01.T01:CDS | 35.0% |
!! | AATCACCCTTGGTTTTTGAA+TGG | - | Chr7:12534455-12534474 | None:intergenic | 35.0% |
!! | AGCAGTTGATTGATGATGTT+AGG | + | Chr7:12535226-12535245 | MsG0780036726.01.T01:CDS | 35.0% |
!! | ATGAAAGGGTTGATATTGAG+GGG | + | Chr7:12535640-12535659 | MsG0780036726.01.T01:CDS | 35.0% |
!! | ATGTGATTGGTTCTGTGTAA+AGG | + | Chr7:12533582-12533601 | MsG0780036726.01.T01:intron | 35.0% |
!! | GTTGATTGATGATGTTAGGA+AGG | + | Chr7:12535230-12535249 | MsG0780036726.01.T01:CDS | 35.0% |
!! | TAGGTGCCTAAATGTTGTTT+TGG | + | Chr7:12533702-12533721 | MsG0780036726.01.T01:intron | 35.0% |
!!! | TATCTCTTTTTTGCTGAGTG+AGG | + | Chr7:12533911-12533930 | MsG0780036726.01.T01:intron | 35.0% |
!!! | TTTTTCAAGGTACGCAGATA+GGG | - | Chr7:12534524-12534543 | None:intergenic | 35.0% |
AAGGTAGAGAAGACCCAATT+CGG | - | Chr7:12534614-12534633 | None:intergenic | 40.0% | |
AATCTAAATCCTCGACTGCT+TGG | - | Chr7:12535694-12535713 | None:intergenic | 40.0% | |
ACAAGAAGGTTTGCGAGATT+AGG | - | Chr7:12535429-12535448 | None:intergenic | 40.0% | |
ACTGCTTCTTGTCTACTTGT+TGG | - | Chr7:12535212-12535231 | None:intergenic | 40.0% | |
AGATCAAGCAACGGTTACTA+TGG | - | Chr7:12533797-12533816 | None:intergenic | 40.0% | |
AGCATCCAATGAAGCTTCAA+TGG | - | Chr7:12535106-12535125 | None:intergenic | 40.0% | |
ATCAAAGGTTGACGAAACTG+TGG | + | Chr7:12534363-12534382 | MsG0780036726.01.T01:CDS | 40.0% | |
ATCCAATGAAGCTTCAATGG+TGG | - | Chr7:12535103-12535122 | None:intergenic | 40.0% | |
ATTCTTGGACAGAATCAAGC+AGG | + | Chr7:12535389-12535408 | MsG0780036726.01.T01:CDS | 40.0% | |
CAAGAAGGTTTGCGAGATTA+GGG | - | Chr7:12535428-12535447 | None:intergenic | 40.0% | |
CAAGCTTGAACCATTCAGTA+TGG | - | Chr7:12535671-12535690 | None:intergenic | 40.0% | |
CAATATTGAGTGCGAGATTC+TGG | - | Chr7:12534303-12534322 | None:intergenic | 40.0% | |
CGGTGCTCATACATATGAAA+GGG | + | Chr7:12535626-12535645 | MsG0780036726.01.T01:CDS | 40.0% | |
CTATCTGCGTACCTTGAAAA+AGG | + | Chr7:12534523-12534542 | MsG0780036726.01.T01:CDS | 40.0% | |
CTTGACAAAACTGGCATGAA+GGG | + | Chr7:12535027-12535046 | MsG0780036726.01.T01:CDS | 40.0% | |
GACAAGGTTCTTGACAAAAC+TGG | + | Chr7:12535018-12535037 | MsG0780036726.01.T01:CDS | 40.0% | |
GATACCTGAATTGACAGCAA+GGG | - | Chr7:12535511-12535530 | None:intergenic | 40.0% | |
GCAAAGGTCTTTAAATCAGG+TGG | + | Chr7:12535165-12535184 | MsG0780036726.01.T01:CDS | 40.0% | |
GCTGCAAAGGTCTTTAAATC+AGG | + | Chr7:12535162-12535181 | MsG0780036726.01.T01:CDS | 40.0% | |
GTCTTTAAATCAGGTGGCTT+TGG | + | Chr7:12535171-12535190 | MsG0780036726.01.T01:CDS | 40.0% | |
GTGACATATATCGGTAAAGG+TGG | + | Chr7:12534772-12534791 | MsG0780036726.01.T01:CDS | 40.0% | |
TAATCTCGCAAACCTTCTTG+TGG | + | Chr7:12535428-12535447 | MsG0780036726.01.T01:CDS | 40.0% | |
TACGATGTGTTGAAGTCAGT+TGG | + | Chr7:12534865-12534884 | MsG0780036726.01.T01:CDS | 40.0% | |
TATATCGGTAAAGGTGGATC+TGG | + | Chr7:12534778-12534797 | MsG0780036726.01.T01:CDS | 40.0% | |
TCCAATGAAGCTTCAATGGT+GGG | - | Chr7:12535102-12535121 | None:intergenic | 40.0% | |
TCTTGACAAAACTGGCATGA+AGG | + | Chr7:12535026-12535045 | MsG0780036726.01.T01:CDS | 40.0% | |
TGAAAGAGTTGAAGCTGCAA+AGG | + | Chr7:12535149-12535168 | MsG0780036726.01.T01:CDS | 40.0% | |
TGATACCTGAATTGACAGCA+AGG | - | Chr7:12535512-12535531 | None:intergenic | 40.0% | |
TGCAACCTCCTTTCCAAATA+CGG | - | Chr7:12535356-12535375 | None:intergenic | 40.0% | |
TGCCTGTTTGATATTTGTGC+AGG | + | Chr7:12533839-12533858 | MsG0780036726.01.T01:intron | 40.0% | |
TTATAGAAGGGAAAGGTTGC+CGG | + | Chr7:12535572-12535591 | MsG0780036726.01.T01:CDS | 40.0% | |
TTGAAGCTTCATTGGATGCT+AGG | + | Chr7:12535106-12535125 | MsG0780036726.01.T01:CDS | 40.0% | |
TTGCTGAGTGAGGCAAATTA+AGG | + | Chr7:12533921-12533940 | MsG0780036726.01.T01:intron | 40.0% | |
TTTCATCCTTCAACCCACTA+AGG | - | Chr7:12535134-12535153 | None:intergenic | 40.0% | |
! | CTTCTTGTCTACTTGTTGGT+CGG | - | Chr7:12535208-12535227 | None:intergenic | 40.0% |
! | TCGGTGCTCATACATATGAA+AGG | + | Chr7:12535625-12535644 | MsG0780036726.01.T01:CDS | 40.0% |
!! | AAAGAGTGCTGAAAAGGGTT+GGG | + | Chr7:12535308-12535327 | MsG0780036726.01.T01:CDS | 40.0% |
!! | GGCTGTGTTGCTGTATTTTT+AGG | + | Chr7:12533683-12533702 | MsG0780036726.01.T01:intron | 40.0% |
!! | GTTTTGATGGTCTGATCAAC+AGG | - | Chr7:12534502-12534521 | None:intergenic | 40.0% |
!!! | CTTTTTCAAGGTACGCAGAT+AGG | - | Chr7:12534525-12534544 | None:intergenic | 40.0% |
AAAGGGTTGGGATTTGGCAT+TGG | + | Chr7:12535320-12535339 | MsG0780036726.01.T01:CDS | 45.0% | |
AACTGTGGAACGAGCAAAAC+AGG | + | Chr7:12534378-12534397 | MsG0780036726.01.T01:CDS | 45.0% | |
AAGGGTTGGGATTTGGCATT+GGG | + | Chr7:12535321-12535340 | MsG0780036726.01.T01:CDS | 45.0% | |
AGAGAAAGAGGTAGCCGAAT+TGG | + | Chr7:12534597-12534616 | MsG0780036726.01.T01:CDS | 45.0% | |
AGGCCTATTCTTGTAAGTGG+TGG | - | Chr7:12534259-12534278 | None:intergenic | 45.0% | |
CAAGACTAGCAGACATACCT+GGG | - | Chr7:12535539-12535558 | None:intergenic | 45.0% | |
CAAGCTCAACGAGACTACTT+CGG | + | Chr7:12535606-12535625 | MsG0780036726.01.T01:CDS | 45.0% | |
CTTACAAGAATAGGCCTTGC+CGG | + | Chr7:12534262-12534281 | MsG0780036726.01.T01:CDS | 45.0% | |
GAACTTGCCCGTATTTGGAA+AGG | + | Chr7:12535345-12535364 | MsG0780036726.01.T01:CDS | 45.0% | |
GAATTGGGTCTTCTCTACCT+TGG | + | Chr7:12534613-12534632 | MsG0780036726.01.T01:CDS | 45.0% | |
GAGAAAGAGGTAGCCGAATT+GGG | + | Chr7:12534598-12534617 | MsG0780036726.01.T01:CDS | 45.0% | |
GAGCTTACATAGCTGCAATG+CGG | + | Chr7:12535782-12535801 | MsG0780036726.01.T01:three_prime_UTR | 45.0% | |
GAGGGAAATCTTCCACTCTA+TGG | + | Chr7:12534400-12534419 | MsG0780036726.01.T01:CDS | 45.0% | |
GCAACCTCCTTTCCAAATAC+GGG | - | Chr7:12535355-12535374 | None:intergenic | 45.0% | |
GCAAGGCCTATTCTTGTAAG+TGG | - | Chr7:12534262-12534281 | None:intergenic | 45.0% | |
GCACTCAATATTGCCGACAA+AGG | + | Chr7:12534310-12534329 | MsG0780036726.01.T01:CDS | 45.0% | |
GCTCCACCACTTACAAGAAT+AGG | + | Chr7:12534253-12534272 | MsG0780036726.01.T01:CDS | 45.0% | |
GGCCCTTGTGTGACATATAT+CGG | + | Chr7:12534763-12534782 | MsG0780036726.01.T01:CDS | 45.0% | |
GGTCTTCTCTACCTTGGAAT+GGG | + | Chr7:12534619-12534638 | MsG0780036726.01.T01:CDS | 45.0% | |
TAACAAAGGCTTCAGGGTCA+TGG | - | Chr7:12534429-12534448 | None:intergenic | 45.0% | |
TAAGCTTCAAACGAACCACC+AGG | - | Chr7:12534691-12534710 | None:intergenic | 45.0% | |
TAATTGAACGCCAAACCGCA+TGG | + | Chr7:12535472-12535491 | MsG0780036726.01.T01:CDS | 45.0% | |
TACCTTGGAATGGGAGTTTC+AGG | + | Chr7:12534628-12534647 | MsG0780036726.01.T01:CDS | 45.0% | |
TCCCACCATTGAAGCTTCAT+TGG | + | Chr7:12535098-12535117 | MsG0780036726.01.T01:CDS | 45.0% | |
TGAGCTTGCACCAAATTAGC+CGG | - | Chr7:12535594-12535613 | None:intergenic | 45.0% | |
TGCTGAAAAGGGTTGGGATT+TGG | + | Chr7:12535314-12535333 | MsG0780036726.01.T01:CDS | 45.0% | |
TGGATGCTAGGTTCCTTAGT+GGG | + | Chr7:12535118-12535137 | MsG0780036726.01.T01:CDS | 45.0% | |
TTGCTGAACAGTCCACTTAC+CGG | - | Chr7:12535055-12535074 | None:intergenic | 45.0% | |
TTGGATGCTAGGTTCCTTAG+TGG | + | Chr7:12535117-12535136 | MsG0780036726.01.T01:CDS | 45.0% | |
! | AAAACTGGCATGAAGGGTAC+CGG | + | Chr7:12535033-12535052 | MsG0780036726.01.T01:CDS | 45.0% |
! | CCTTTTCAGCACTCTTTGCA+CGG | - | Chr7:12535305-12535324 | None:intergenic | 45.0% |
! | GTTTCCCTTGCTGTCAATTC+AGG | + | Chr7:12535504-12535523 | MsG0780036726.01.T01:CDS | 45.0% |
!! | CAAAGAGTGCTGAAAAGGGT+TGG | + | Chr7:12535307-12535326 | MsG0780036726.01.T01:CDS | 45.0% |
!! | CGTGCAAAGAGTGCTGAAAA+GGG | + | Chr7:12535303-12535322 | MsG0780036726.01.T01:CDS | 45.0% |
!! | GTACGCAGATAGGGTTTTGA+TGG | - | Chr7:12534515-12534534 | None:intergenic | 45.0% |
!! | TAGGTTCCTTAGTGGGTTGA+AGG | + | Chr7:12535125-12535144 | MsG0780036726.01.T01:CDS | 45.0% |
AAGAATAGGCCTTGCCGGAT+TGG | + | Chr7:12534267-12534286 | MsG0780036726.01.T01:CDS | 50.0% | |
AATTCAGGTATCAGCCTCCC+AGG | + | Chr7:12535519-12535538 | MsG0780036726.01.T01:CDS | 50.0% | |
AGGGGTCGTACCATACTGAA+TGG | + | Chr7:12535658-12535677 | MsG0780036726.01.T01:CDS | 50.0% | |
CACCTGAAACTCCCATTCCA+AGG | - | Chr7:12534633-12534652 | None:intergenic | 50.0% | |
CACTGAGAGACGAGAGAAAG+AGG | + | Chr7:12534585-12534604 | MsG0780036726.01.T01:CDS | 50.0% | |
CGAACTCTGGATCCACAAGA+AGG | - | Chr7:12535443-12535462 | None:intergenic | 50.0% | |
CTTGCCCGTATTTGGAAAGG+AGG | + | Chr7:12535348-12535367 | MsG0780036726.01.T01:CDS | 50.0% | |
CTTGGAATGGGAGTTTCAGG+TGG | + | Chr7:12534631-12534650 | MsG0780036726.01.T01:CDS | 50.0% | |
GAACCACCAGGCATCATAGA+AGG | - | Chr7:12534679-12534698 | None:intergenic | 50.0% | |
GCAAGACTAGCAGACATACC+TGG | - | Chr7:12535540-12535559 | None:intergenic | 50.0% | |
GGAAACAACTCTCCTCCATG+CGG | - | Chr7:12535490-12535509 | None:intergenic | 50.0% | |
GGGTCTTCTCTACCTTGGAA+TGG | + | Chr7:12534618-12534637 | MsG0780036726.01.T01:CDS | 50.0% | |
GTGGAACGAGCAAAACAGGA+GGG | + | Chr7:12534382-12534401 | MsG0780036726.01.T01:CDS | 50.0% | |
TGACATGCAGCTGATTGCTG+AGG | + | Chr7:12534840-12534859 | MsG0780036726.01.T01:CDS | 50.0% | |
TGGGTGAACTTGCCCGTATT+TGG | + | Chr7:12535340-12535359 | MsG0780036726.01.T01:CDS | 50.0% | |
TGTGGAACGAGCAAAACAGG+AGG | + | Chr7:12534381-12534400 | MsG0780036726.01.T01:CDS | 50.0% | |
TGTGGATCCAGAGTTCGCAA+AGG | + | Chr7:12535446-12535465 | MsG0780036726.01.T01:CDS | 50.0% | |
! | AATGGGAGTTTCAGGTGGTG+AGG | + | Chr7:12534636-12534655 | MsG0780036726.01.T01:CDS | 50.0% |
! | GGAAAGGTTGCCGGCTAATT+TGG | + | Chr7:12535581-12535600 | MsG0780036726.01.T01:CDS | 50.0% |
!! | CCGTGCAAAGAGTGCTGAAA+AGG | + | Chr7:12535302-12535321 | MsG0780036726.01.T01:CDS | 50.0% |
!! | CTTGCCGGATTGGCTGTTAT+GGG | + | Chr7:12534277-12534296 | MsG0780036726.01.T01:CDS | 50.0% |
CAACTCTCCTCCATGCGGTT+TGG | - | Chr7:12535485-12535504 | None:intergenic | 55.0% | |
CCATAACAGCCAATCCGGCA+AGG | - | Chr7:12534279-12534298 | None:intergenic | 55.0% | |
CGTGGTCCTTCTATGATGCC+TGG | + | Chr7:12534670-12534689 | MsG0780036726.01.T01:CDS | 55.0% | |
CTGGCCCATAACAGCCAATC+CGG | - | Chr7:12534284-12534303 | None:intergenic | 55.0% | |
GACTAGCAGACATACCTGGG+AGG | - | Chr7:12535536-12535555 | None:intergenic | 55.0% | |
GCTGCTCAAGTTCCTGACAG+TGG | + | Chr7:12534742-12534761 | MsG0780036726.01.T01:CDS | 55.0% | |
GGGTCATGGAAGCCATAGAG+TGG | - | Chr7:12534415-12534434 | None:intergenic | 55.0% | |
GGTCCTTCTATGATGCCTGG+TGG | + | Chr7:12534673-12534692 | MsG0780036726.01.T01:CDS | 55.0% | |
TCAAGCTTGCCAAGCAGTCG+AGG | + | Chr7:12535682-12535701 | MsG0780036726.01.T01:CDS | 55.0% | |
TTGAACGCCAAACCGCATGG+AGG | + | Chr7:12535475-12535494 | MsG0780036726.01.T01:CDS | 55.0% | |
! | GAAGCTTCAATGGTGGGAGC+AGG | - | Chr7:12535096-12535115 | None:intergenic | 55.0% |
! | GGAGTTTCAGGTGGTGAGGA+GGG | + | Chr7:12534640-12534659 | MsG0780036726.01.T01:CDS | 55.0% |
!! | CCTTGCCGGATTGGCTGTTA+TGG | + | Chr7:12534276-12534295 | MsG0780036726.01.T01:CDS | 55.0% |
!! | GCATGAAGGGTACCGGTAAG+TGG | + | Chr7:12535040-12535059 | MsG0780036726.01.T01:CDS | 55.0% |
GTCACACAAGGGCCACTGTC+AGG | - | Chr7:12534757-12534776 | None:intergenic | 60.0% | |
! | GGGAGTTTCAGGTGGTGAGG+AGG | + | Chr7:12534639-12534658 | MsG0780036726.01.T01:CDS | 60.0% |
!! | GGTGAGGAGGGTGCTCGACG+TGG | + | Chr7:12534652-12534671 | MsG0780036726.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 12533566 | 12536032 | 12533566 | ID=MsG0780036726.01;Name=MsG0780036726.01 |
Chr7 | mRNA | 12533566 | 12536032 | 12533566 | ID=MsG0780036726.01.T01;Parent=MsG0780036726.01;Name=MsG0780036726.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0.5|1|0|0|2|322|493 |
Chr7 | exon | 12533566 | 12533576 | 12533566 | ID=MsG0780036726.01.T01:exon:1765;Parent=MsG0780036726.01.T01 |
Chr7 | exon | 12534240 | 12536032 | 12534240 | ID=MsG0780036726.01.T01:exon:1766;Parent=MsG0780036726.01.T01 |
Chr7 | CDS | 12533566 | 12533576 | 12533566 | ID=MsG0780036726.01.T01:cds;Parent=MsG0780036726.01.T01 |
Chr7 | CDS | 12534240 | 12535710 | 12534240 | ID=MsG0780036726.01.T01:cds;Parent=MsG0780036726.01.T01 |
Chr7 | three_prime_UTR | 12535711 | 12536032 | 12535711 | ID=MsG0780036726.01.T01:three_prime_utr;Parent=MsG0780036726.01.T01 |
Gene Sequence |
Protein sequence |