Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005367.01.T01 | PHT50556.1 | 74.254 | 268 | 46 | 1 | 1 | 245 | 1 | 268 | 2.94E-139 | 402 |
| MsG0180005367.01.T02 | PHT50556.1 | 74.254 | 268 | 46 | 1 | 1 | 245 | 1 | 268 | 2.94E-139 | 402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005367.01.T01 | Q9SZ96 | 72.775 | 191 | 44 | 3 | 1 | 183 | 1 | 191 | 9.57E-90 | 271 |
| MsG0180005367.01.T02 | Q9SZ96 | 72.775 | 191 | 44 | 3 | 1 | 183 | 1 | 191 | 9.57E-90 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005367.01.T01 | A0A2N9J1Q6 | 80.597 | 268 | 29 | 1 | 1 | 245 | 1 | 268 | 6.34e-153 | 436 |
| MsG0180005367.01.T02 | A0A2N9J1Q6 | 80.597 | 268 | 29 | 1 | 1 | 245 | 1 | 268 | 6.34e-153 | 436 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049008.01 | MsG0180005367.01 | 0.812444 | 4.226329e-51 | 2.687795e-48 |
| MsG0180000535.01 | MsG0180005367.01 | 0.830779 | 2.422661e-55 | 2.578238e-52 |
| MsG0180003905.01 | MsG0180005367.01 | 0.852904 | 3.398272e-61 | 7.210775e-58 |
| MsG0180004705.01 | MsG0180005367.01 | 0.807705 | 4.436122e-50 | 2.488052e-47 |
| MsG0180004828.01 | MsG0180005367.01 | 0.806784 | 6.951889e-50 | 3.806867e-47 |
| MsG0180005325.01 | MsG0180005367.01 | 0.809507 | 1.828596e-50 | 1.075587e-47 |
| MsG0180005367.01 | MsG0180005655.01 | 0.821987 | 3.013815e-53 | 2.490240e-50 |
| MsG0180005367.01 | MsG0180005741.01 | 0.854912 | 8.973211e-62 | 2.035608e-58 |
| MsG0180005367.01 | MsG0180005898.01 | -0.815199 | 1.044971e-51 | 7.156986e-49 |
| MsG0180005367.01 | MsG0180006076.01 | -0.818735 | 1.678351e-52 | 1.266626e-49 |
| MsG0180005367.01 | MsG0180006116.01 | 0.836800 | 7.569056e-57 | 9.643024e-54 |
| MsG0180005367.01 | MsG0280007667.01 | 0.836353 | 9.834188e-57 | 1.236291e-53 |
| MsG0180005367.01 | MsG0280007695.01 | 0.800133 | 1.662665e-48 | 7.682136e-46 |
| MsG0180005367.01 | MsG0280010103.01 | 0.806987 | 6.298413e-50 | 3.467173e-47 |
| MsG0180005367.01 | MsG0380015644.01 | 0.801356 | 9.359293e-49 | 4.460467e-46 |
| MsG0180005367.01 | MsG0380015656.01 | 0.898504 | 4.972691e-77 | 5.893708e-73 |
| MsG0180005367.01 | MsG0380015954.01 | 0.806483 | 8.047316e-50 | 4.372900e-47 |
| MsG0180005367.01 | MsG0380016141.01 | 0.822639 | 2.126614e-53 | 1.790334e-50 |
| MsG0180005367.01 | MsG0380016143.01 | 0.805825 | 1.107102e-49 | 5.915850e-47 |
| MsG0180005367.01 | MsG0380016250.01 | 0.808266 | 3.369351e-50 | 1.917949e-47 |
| MsG0180005367.01 | MsG0380017588.01 | 0.807195 | 5.691577e-50 | 3.150157e-47 |
| MsG0180005367.01 | MsG0380017594.01 | 0.812678 | 3.756141e-51 | 2.403354e-48 |
| MsG0180005367.01 | MsG0380017696.01 | 0.811071 | 8.408011e-51 | 5.154544e-48 |
| MsG0180005367.01 | MsG0380017913.01 | 0.825287 | 5.089845e-54 | 4.619498e-51 |
| MsG0180005367.01 | MsG0380017967.01 | 0.838869 | 2.225547e-57 | 3.020305e-54 |
| MsG0180005367.01 | MsG0380017994.01 | 0.824999 | 5.953916e-54 | 5.359772e-51 |
| MsG0180005367.01 | MsG0480018111.01 | 0.854997 | 8.473931e-62 | 1.927892e-58 |
| MsG0180005367.01 | MsG0480018228.01 | 0.827033 | 1.956207e-54 | 1.866262e-51 |
| MsG0180005367.01 | MsG0480018767.01 | 0.830522 | 2.800328e-55 | 2.957537e-52 |
| MsG0180005367.01 | MsG0480020398.01 | 0.811022 | 8.617655e-51 | 5.276571e-48 |
| MsG0180005367.01 | MsG0480020448.01 | 0.851814 | 6.947043e-61 | 1.423029e-57 |
| MsG0180005367.01 | MsG0480021226.01 | 0.808070 | 3.709905e-50 | 2.100738e-47 |
| MsG0180005367.01 | MsG0480021300.01 | 0.897330 | 1.560646e-76 | 1.754713e-72 |
| MsG0180005367.01 | MsG0480021977.01 | 0.811128 | 8.173513e-51 | 5.018238e-48 |
| MsG0180005367.01 | MsG0480023414.01 | 0.816360 | 5.757250e-52 | 4.070818e-49 |
| MsG0180005367.01 | MsG0480023454.01 | 0.814025 | 1.900876e-51 | 1.261258e-48 |
| MsG0180005367.01 | MsG0480023944.01 | 0.817764 | 2.784013e-52 | 2.045728e-49 |
| MsG0180005367.01 | MsG0580024773.01 | 0.821510 | 3.886390e-53 | 3.167975e-50 |
| MsG0180005367.01 | MsG0580025140.01 | 0.813498 | 2.482551e-51 | 1.623936e-48 |
| MsG0180005367.01 | MsG0580025464.01 | 0.821826 | 3.284187e-53 | 2.701414e-50 |
| MsG0180005367.01 | MsG0580025633.01 | 0.808984 | 2.367829e-50 | 1.373404e-47 |
| MsG0180005367.01 | MsG0580026343.01 | 0.806318 | 8.718375e-50 | 4.717601e-47 |
| MsG0180005367.01 | MsG0580028302.01 | 0.820012 | 8.586357e-53 | 6.714536e-50 |
| MsG0180005367.01 | MsG0580028364.01 | 0.827295 | 1.693378e-54 | 1.628040e-51 |
| MsG0180005367.01 | MsG0580029751.01 | -0.801589 | 8.383785e-49 | 4.018985e-46 |
| MsG0180005367.01 | MsG0580030141.01 | 0.827733 | 1.329255e-54 | 1.294245e-51 |
| MsG0180005367.01 | MsG0680034694.01 | 0.814366 | 1.597930e-51 | 1.070121e-48 |
| MsG0180005367.01 | MsG0780036793.01 | 0.823633 | 1.246856e-53 | 1.079577e-50 |
| MsG0180005367.01 | MsG0780038647.01 | 0.835531 | 1.589904e-56 | 1.949523e-53 |
| MsG0180005367.01 | MsG0780039234.01 | 0.840816 | 6.923119e-58 | 9.978072e-55 |
| MsG0180005367.01 | MsG0780040153.01 | 0.807297 | 5.415356e-50 | 3.005264e-47 |
| MsG0180005367.01 | MsG0780040560.01 | 0.806183 | 9.309664e-50 | 5.020458e-47 |
| MsG0180005367.01 | MsG0780040899.01 | 0.805197 | 1.499186e-49 | 7.882667e-47 |
| MsG0180005367.01 | MsG0780040978.01 | 0.841372 | 4.946158e-58 | 7.252765e-55 |
| MsG0180005367.01 | MsG0780040990.01 | 0.820343 | 7.210698e-53 | 5.690527e-50 |
| MsG0180005367.01 | MsG0880043495.01 | 0.805013 | 1.638142e-49 | 8.572510e-47 |
| MsG0180005367.01 | MsG0880044139.01 | 0.831043 | 2.087970e-55 | 2.239330e-52 |
| MsG0180005367.01 | MsG0880045356.01 | 0.805517 | 1.284788e-49 | 6.810821e-47 |
| MsG0180005367.01 | MsG0880045439.01 | 0.831266 | 1.840308e-55 | 1.986766e-52 |
| MsG0180005367.01 | MsG0880045553.01 | 0.822584 | 2.190669e-53 | 1.841405e-50 |
| MsG0180005367.01 | MsG0880045584.01 | 0.817399 | 3.364154e-52 | 2.447406e-49 |
| MsG0180005367.01 | MsG0880045949.01 | 0.828050 | 1.114987e-54 | 1.095824e-51 |
| MsG0180005367.01 | MsG0880045963.01 | 0.802299 | 5.991633e-49 | 2.924768e-46 |
| MsG0180005367.01 | MsG0880047057.01 | 0.803732 | 3.029168e-49 | 1.533784e-46 |
| MsG0180005367.01 | MsG0880047414.01 | 0.818929 | 1.516437e-52 | 1.150773e-49 |
| MsG0180005367.01 | MsG0880047631.01 | 0.814448 | 1.532805e-51 | 1.028777e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005367.01.T01 | MTR_1g098240 | 82.723 | 191 | 25 | 2 | 1 | 183 | 1 | 191 | 5.30e-104 | 304 |
| MsG0180005367.01.T01 | MTR_1g098240 | 95.918 | 98 | 2 | 1 | 148 | 245 | 225 | 320 | 4.07e-60 | 192 |
| MsG0180005367.01.T01 | MTR_3g095130 | 64.921 | 191 | 59 | 3 | 1 | 183 | 1 | 191 | 2.95e-79 | 242 |
| MsG0180005367.01.T01 | MTR_3g095130 | 83.505 | 97 | 16 | 0 | 148 | 244 | 225 | 321 | 7.46e-53 | 174 |
| MsG0180005367.01.T01 | MTR_8g092190 | 61.538 | 195 | 67 | 3 | 1 | 187 | 1 | 195 | 5.97e-77 | 236 |
| MsG0180005367.01.T01 | MTR_8g092190 | 75.510 | 98 | 21 | 1 | 150 | 244 | 227 | 324 | 4.61e-46 | 157 |
| MsG0180005367.01.T01 | MTR_3g095130 | 83.505 | 97 | 16 | 0 | 148 | 244 | 176 | 272 | 2.48e-53 | 174 |
| MsG0180005367.01.T01 | MTR_3g095130 | 61.972 | 142 | 46 | 3 | 50 | 183 | 1 | 142 | 1.70e-50 | 166 |
| MsG0180005367.01.T01 | MTR_1g026590 | 49.730 | 185 | 81 | 4 | 17 | 190 | 15 | 198 | 1.81e-36 | 132 |
| MsG0180005367.01.T01 | MTR_1g026590 | 48.958 | 96 | 40 | 3 | 150 | 242 | 227 | 316 | 2.46e-20 | 88.6 |
| MsG0180005367.01.T01 | MTR_5g004620 | 45.588 | 204 | 94 | 7 | 8 | 195 | 7 | 209 | 2.06e-35 | 129 |
| MsG0180005367.01.T01 | MTR_5g004620 | 47.368 | 95 | 48 | 2 | 152 | 245 | 232 | 325 | 3.97e-20 | 88.2 |
| MsG0180005367.01.T01 | MTR_2g094640 | 39.706 | 136 | 82 | 0 | 17 | 152 | 14 | 149 | 1.07e-21 | 92.4 |
| MsG0180005367.01.T01 | MTR_2g094640 | 40.244 | 82 | 48 | 1 | 151 | 232 | 225 | 305 | 4.93e-11 | 62.0 |
| MsG0180005367.01.T01 | MTR_4g058860 | 36.527 | 167 | 97 | 2 | 17 | 179 | 14 | 175 | 1.50e-21 | 92.0 |
| MsG0180005367.01.T01 | MTR_3g094270 | 35.802 | 162 | 88 | 2 | 32 | 181 | 29 | 186 | 9.71e-18 | 81.3 |
| MsG0180005367.01.T01 | MTR_2g038410 | 33.775 | 151 | 96 | 1 | 4 | 150 | 45 | 195 | 7.93e-17 | 79.3 |
| MsG0180005367.01.T01 | MTR_3g094260 | 38.017 | 121 | 75 | 0 | 32 | 152 | 29 | 149 | 6.18e-16 | 76.3 |
| MsG0180005367.01.T01 | MTR_3g094260 | 30.769 | 117 | 80 | 1 | 104 | 220 | 178 | 293 | 3.42e-11 | 62.8 |
| MsG0180005367.01.T01 | MTR_5g096310 | 33.594 | 128 | 71 | 2 | 4 | 122 | 46 | 168 | 6.22e-12 | 65.1 |
| MsG0180005367.01.T01 | MTR_1291s0010 | 39.785 | 93 | 56 | 0 | 16 | 108 | 13 | 105 | 4.07e-11 | 58.9 |
| MsG0180005367.01.T02 | MTR_1g098240 | 82.723 | 191 | 25 | 2 | 1 | 183 | 1 | 191 | 5.30e-104 | 304 |
| MsG0180005367.01.T02 | MTR_1g098240 | 95.918 | 98 | 2 | 1 | 148 | 245 | 225 | 320 | 4.07e-60 | 192 |
| MsG0180005367.01.T02 | MTR_3g095130 | 64.921 | 191 | 59 | 3 | 1 | 183 | 1 | 191 | 2.95e-79 | 242 |
| MsG0180005367.01.T02 | MTR_3g095130 | 83.505 | 97 | 16 | 0 | 148 | 244 | 225 | 321 | 7.46e-53 | 174 |
| MsG0180005367.01.T02 | MTR_8g092190 | 61.538 | 195 | 67 | 3 | 1 | 187 | 1 | 195 | 5.97e-77 | 236 |
| MsG0180005367.01.T02 | MTR_8g092190 | 75.510 | 98 | 21 | 1 | 150 | 244 | 227 | 324 | 4.61e-46 | 157 |
| MsG0180005367.01.T02 | MTR_3g095130 | 83.505 | 97 | 16 | 0 | 148 | 244 | 176 | 272 | 2.48e-53 | 174 |
| MsG0180005367.01.T02 | MTR_3g095130 | 61.972 | 142 | 46 | 3 | 50 | 183 | 1 | 142 | 1.70e-50 | 166 |
| MsG0180005367.01.T02 | MTR_1g026590 | 49.730 | 185 | 81 | 4 | 17 | 190 | 15 | 198 | 1.81e-36 | 132 |
| MsG0180005367.01.T02 | MTR_1g026590 | 48.958 | 96 | 40 | 3 | 150 | 242 | 227 | 316 | 2.46e-20 | 88.6 |
| MsG0180005367.01.T02 | MTR_5g004620 | 45.588 | 204 | 94 | 7 | 8 | 195 | 7 | 209 | 2.06e-35 | 129 |
| MsG0180005367.01.T02 | MTR_5g004620 | 47.368 | 95 | 48 | 2 | 152 | 245 | 232 | 325 | 3.97e-20 | 88.2 |
| MsG0180005367.01.T02 | MTR_2g094640 | 39.706 | 136 | 82 | 0 | 17 | 152 | 14 | 149 | 1.07e-21 | 92.4 |
| MsG0180005367.01.T02 | MTR_2g094640 | 40.244 | 82 | 48 | 1 | 151 | 232 | 225 | 305 | 4.93e-11 | 62.0 |
| MsG0180005367.01.T02 | MTR_4g058860 | 36.527 | 167 | 97 | 2 | 17 | 179 | 14 | 175 | 1.50e-21 | 92.0 |
| MsG0180005367.01.T02 | MTR_3g094270 | 35.802 | 162 | 88 | 2 | 32 | 181 | 29 | 186 | 9.71e-18 | 81.3 |
| MsG0180005367.01.T02 | MTR_2g038410 | 33.775 | 151 | 96 | 1 | 4 | 150 | 45 | 195 | 7.93e-17 | 79.3 |
| MsG0180005367.01.T02 | MTR_3g094260 | 38.017 | 121 | 75 | 0 | 32 | 152 | 29 | 149 | 6.18e-16 | 76.3 |
| MsG0180005367.01.T02 | MTR_3g094260 | 30.769 | 117 | 80 | 1 | 104 | 220 | 178 | 293 | 3.42e-11 | 62.8 |
| MsG0180005367.01.T02 | MTR_5g096310 | 33.594 | 128 | 71 | 2 | 4 | 122 | 46 | 168 | 6.22e-12 | 65.1 |
| MsG0180005367.01.T02 | MTR_1291s0010 | 39.785 | 93 | 56 | 0 | 16 | 108 | 13 | 105 | 4.07e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005367.01.T01 | AT4G09810 | 72.775 | 191 | 44 | 3 | 1 | 183 | 1 | 191 | 8.08e-93 | 273 |
| MsG0180005367.01.T01 | AT4G09810 | 72.775 | 191 | 44 | 3 | 1 | 183 | 1 | 191 | 9.75e-91 | 271 |
| MsG0180005367.01.T01 | AT4G09810 | 78.571 | 98 | 21 | 0 | 146 | 243 | 223 | 320 | 7.13e-52 | 172 |
| MsG0180005367.01.T01 | AT1G34020 | 73.298 | 191 | 43 | 3 | 1 | 183 | 1 | 191 | 3.44e-81 | 247 |
| MsG0180005367.01.T01 | AT1G34020 | 83.505 | 97 | 16 | 0 | 147 | 243 | 224 | 320 | 1.40e-53 | 176 |
| MsG0180005367.01.T01 | AT1G34020 | 73.298 | 191 | 43 | 3 | 1 | 183 | 1 | 191 | 3.44e-81 | 247 |
| MsG0180005367.01.T01 | AT1G34020 | 83.505 | 97 | 16 | 0 | 147 | 243 | 224 | 320 | 1.40e-53 | 176 |
| MsG0180005367.01.T01 | AT1G34020 | 73.298 | 191 | 43 | 3 | 1 | 183 | 1 | 191 | 3.44e-81 | 247 |
| MsG0180005367.01.T01 | AT1G34020 | 83.505 | 97 | 16 | 0 | 147 | 243 | 224 | 320 | 1.40e-53 | 176 |
| MsG0180005367.01.T01 | AT4G39390 | 66.842 | 190 | 55 | 3 | 2 | 183 | 3 | 192 | 2.08e-73 | 227 |
| MsG0180005367.01.T01 | AT4G39390 | 78.351 | 97 | 21 | 0 | 147 | 243 | 225 | 321 | 6.46e-49 | 164 |
| MsG0180005367.01.T01 | AT4G39390 | 66.842 | 190 | 55 | 3 | 2 | 183 | 7 | 196 | 2.66e-73 | 227 |
| MsG0180005367.01.T01 | AT4G39390 | 78.351 | 97 | 21 | 0 | 147 | 243 | 229 | 325 | 8.10e-49 | 164 |
| MsG0180005367.01.T01 | AT4G39390 | 66.842 | 190 | 55 | 3 | 2 | 183 | 7 | 196 | 2.66e-73 | 227 |
| MsG0180005367.01.T01 | AT4G39390 | 78.351 | 97 | 21 | 0 | 147 | 243 | 229 | 325 | 8.10e-49 | 164 |
| MsG0180005367.01.T01 | AT4G09810 | 68.657 | 134 | 34 | 3 | 58 | 183 | 1 | 134 | 3.40e-54 | 176 |
| MsG0180005367.01.T01 | AT4G09810 | 78.571 | 98 | 21 | 0 | 146 | 243 | 166 | 263 | 2.99e-52 | 171 |
| MsG0180005367.01.T01 | AT5G42420 | 39.918 | 243 | 109 | 5 | 2 | 220 | 3 | 232 | 3.10e-47 | 158 |
| MsG0180005367.01.T01 | AT1G21070 | 46.330 | 218 | 97 | 7 | 1 | 199 | 1 | 217 | 1.25e-43 | 150 |
| MsG0180005367.01.T01 | AT1G21070 | 47.778 | 90 | 44 | 2 | 152 | 241 | 232 | 318 | 9.63e-18 | 81.6 |
| MsG0180005367.01.T01 | AT1G76670 | 47.805 | 205 | 91 | 6 | 6 | 195 | 5 | 208 | 2.66e-42 | 147 |
| MsG0180005367.01.T01 | AT1G76670 | 48.315 | 89 | 36 | 2 | 152 | 231 | 231 | 318 | 3.10e-18 | 82.8 |
| MsG0180005367.01.T01 | AT1G76670 | 47.805 | 205 | 91 | 6 | 6 | 195 | 5 | 208 | 2.66e-42 | 147 |
| MsG0180005367.01.T01 | AT1G76670 | 48.315 | 89 | 36 | 2 | 152 | 231 | 231 | 318 | 3.10e-18 | 82.8 |
| MsG0180005367.01.T01 | AT5G42420 | 45.178 | 197 | 96 | 4 | 2 | 187 | 3 | 198 | 1.78e-41 | 145 |
| MsG0180005367.01.T01 | AT5G42420 | 52.113 | 71 | 33 | 1 | 150 | 220 | 230 | 299 | 2.94e-17 | 80.1 |
| MsG0180005367.01.T01 | AT2G28315 | 38.060 | 134 | 83 | 0 | 17 | 150 | 14 | 147 | 4.09e-21 | 90.5 |
| MsG0180005367.01.T01 | AT2G28315 | 38.235 | 136 | 84 | 0 | 17 | 152 | 14 | 149 | 4.23e-21 | 90.9 |
| MsG0180005367.01.T01 | AT2G28315 | 36.449 | 107 | 55 | 3 | 151 | 245 | 225 | 330 | 9.40e-11 | 61.2 |
| MsG0180005367.01.T01 | AT1G06890 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 1.17e-17 | 81.3 |
| MsG0180005367.01.T01 | AT1G06890 | 35.714 | 98 | 58 | 3 | 151 | 245 | 225 | 320 | 3.15e-12 | 65.9 |
| MsG0180005367.01.T01 | AT1G06890 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 1.17e-17 | 81.3 |
| MsG0180005367.01.T01 | AT1G06890 | 35.714 | 98 | 58 | 3 | 151 | 245 | 225 | 320 | 3.15e-12 | 65.9 |
| MsG0180005367.01.T01 | AT1G06890 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 1.26e-17 | 81.3 |
| MsG0180005367.01.T01 | AT1G06890 | 35.714 | 98 | 58 | 3 | 151 | 245 | 225 | 320 | 3.29e-12 | 65.9 |
| MsG0180005367.01.T01 | AT1G06890 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 1.40e-17 | 81.3 |
| MsG0180005367.01.T01 | AT1G06890 | 35.714 | 98 | 58 | 3 | 151 | 245 | 225 | 320 | 3.60e-12 | 65.5 |
| MsG0180005367.01.T01 | AT2G30460 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 3.30e-17 | 80.1 |
| MsG0180005367.01.T01 | AT2G30460 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 5.06e-17 | 79.7 |
| MsG0180005367.01.T01 | AT2G30460 | 41.429 | 70 | 40 | 1 | 151 | 220 | 225 | 293 | 1.39e-11 | 63.9 |
| MsG0180005367.01.T01 | AT2G30460 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 5.06e-17 | 79.7 |
| MsG0180005367.01.T01 | AT2G30460 | 41.429 | 70 | 40 | 1 | 151 | 220 | 225 | 293 | 1.39e-11 | 63.9 |
| MsG0180005367.01.T01 | AT5G55950 | 37.778 | 135 | 80 | 2 | 20 | 150 | 63 | 197 | 6.99e-16 | 75.9 |
| MsG0180005367.01.T01 | AT5G55950 | 37.143 | 140 | 74 | 2 | 20 | 150 | 3 | 137 | 1.20e-15 | 75.5 |
| MsG0180005367.01.T01 | AT5G55950 | 37.143 | 140 | 74 | 2 | 20 | 150 | 63 | 197 | 1.45e-15 | 75.5 |
| MsG0180005367.01.T01 | AT5G57100 | 30.323 | 155 | 100 | 3 | 3 | 150 | 51 | 204 | 1.17e-12 | 66.2 |
| MsG0180005367.01.T01 | AT5G57100 | 33.088 | 136 | 85 | 2 | 20 | 150 | 70 | 204 | 1.79e-12 | 66.2 |
| MsG0180005367.01.T01 | AT5G57100 | 30.323 | 155 | 100 | 3 | 3 | 150 | 51 | 204 | 3.79e-12 | 65.9 |
| MsG0180005367.01.T01 | AT2G30460 | 38.532 | 109 | 67 | 0 | 44 | 152 | 20 | 128 | 5.74e-12 | 64.7 |
| MsG0180005367.01.T01 | AT2G30460 | 40.845 | 71 | 41 | 1 | 151 | 221 | 204 | 273 | 1.22e-11 | 63.9 |
| MsG0180005367.01.T01 | AT2G30460 | 38.532 | 109 | 67 | 0 | 44 | 152 | 20 | 128 | 5.74e-12 | 64.7 |
| MsG0180005367.01.T01 | AT2G30460 | 40.845 | 71 | 41 | 1 | 151 | 221 | 204 | 273 | 1.22e-11 | 63.9 |
| MsG0180005367.01.T01 | AT2G30460 | 38.532 | 109 | 67 | 0 | 44 | 152 | 20 | 128 | 5.74e-12 | 64.7 |
| MsG0180005367.01.T01 | AT2G30460 | 40.845 | 71 | 41 | 1 | 151 | 221 | 204 | 273 | 1.22e-11 | 63.9 |
| MsG0180005367.01.T02 | AT4G09810 | 72.775 | 191 | 44 | 3 | 1 | 183 | 1 | 191 | 8.08e-93 | 273 |
| MsG0180005367.01.T02 | AT4G09810 | 72.775 | 191 | 44 | 3 | 1 | 183 | 1 | 191 | 9.75e-91 | 271 |
| MsG0180005367.01.T02 | AT4G09810 | 78.571 | 98 | 21 | 0 | 146 | 243 | 223 | 320 | 7.13e-52 | 172 |
| MsG0180005367.01.T02 | AT1G34020 | 73.298 | 191 | 43 | 3 | 1 | 183 | 1 | 191 | 3.44e-81 | 247 |
| MsG0180005367.01.T02 | AT1G34020 | 83.505 | 97 | 16 | 0 | 147 | 243 | 224 | 320 | 1.40e-53 | 176 |
| MsG0180005367.01.T02 | AT1G34020 | 73.298 | 191 | 43 | 3 | 1 | 183 | 1 | 191 | 3.44e-81 | 247 |
| MsG0180005367.01.T02 | AT1G34020 | 83.505 | 97 | 16 | 0 | 147 | 243 | 224 | 320 | 1.40e-53 | 176 |
| MsG0180005367.01.T02 | AT1G34020 | 73.298 | 191 | 43 | 3 | 1 | 183 | 1 | 191 | 3.44e-81 | 247 |
| MsG0180005367.01.T02 | AT1G34020 | 83.505 | 97 | 16 | 0 | 147 | 243 | 224 | 320 | 1.40e-53 | 176 |
| MsG0180005367.01.T02 | AT4G39390 | 66.842 | 190 | 55 | 3 | 2 | 183 | 3 | 192 | 2.08e-73 | 227 |
| MsG0180005367.01.T02 | AT4G39390 | 78.351 | 97 | 21 | 0 | 147 | 243 | 225 | 321 | 6.46e-49 | 164 |
| MsG0180005367.01.T02 | AT4G39390 | 66.842 | 190 | 55 | 3 | 2 | 183 | 7 | 196 | 2.66e-73 | 227 |
| MsG0180005367.01.T02 | AT4G39390 | 78.351 | 97 | 21 | 0 | 147 | 243 | 229 | 325 | 8.10e-49 | 164 |
| MsG0180005367.01.T02 | AT4G39390 | 66.842 | 190 | 55 | 3 | 2 | 183 | 7 | 196 | 2.66e-73 | 227 |
| MsG0180005367.01.T02 | AT4G39390 | 78.351 | 97 | 21 | 0 | 147 | 243 | 229 | 325 | 8.10e-49 | 164 |
| MsG0180005367.01.T02 | AT4G09810 | 68.657 | 134 | 34 | 3 | 58 | 183 | 1 | 134 | 3.40e-54 | 176 |
| MsG0180005367.01.T02 | AT4G09810 | 78.571 | 98 | 21 | 0 | 146 | 243 | 166 | 263 | 2.99e-52 | 171 |
| MsG0180005367.01.T02 | AT5G42420 | 39.918 | 243 | 109 | 5 | 2 | 220 | 3 | 232 | 3.10e-47 | 158 |
| MsG0180005367.01.T02 | AT1G21070 | 46.330 | 218 | 97 | 7 | 1 | 199 | 1 | 217 | 1.25e-43 | 150 |
| MsG0180005367.01.T02 | AT1G21070 | 47.778 | 90 | 44 | 2 | 152 | 241 | 232 | 318 | 9.63e-18 | 81.6 |
| MsG0180005367.01.T02 | AT1G76670 | 47.805 | 205 | 91 | 6 | 6 | 195 | 5 | 208 | 2.66e-42 | 147 |
| MsG0180005367.01.T02 | AT1G76670 | 48.315 | 89 | 36 | 2 | 152 | 231 | 231 | 318 | 3.10e-18 | 82.8 |
| MsG0180005367.01.T02 | AT1G76670 | 47.805 | 205 | 91 | 6 | 6 | 195 | 5 | 208 | 2.66e-42 | 147 |
| MsG0180005367.01.T02 | AT1G76670 | 48.315 | 89 | 36 | 2 | 152 | 231 | 231 | 318 | 3.10e-18 | 82.8 |
| MsG0180005367.01.T02 | AT5G42420 | 45.178 | 197 | 96 | 4 | 2 | 187 | 3 | 198 | 1.78e-41 | 145 |
| MsG0180005367.01.T02 | AT5G42420 | 52.113 | 71 | 33 | 1 | 150 | 220 | 230 | 299 | 2.94e-17 | 80.1 |
| MsG0180005367.01.T02 | AT2G28315 | 38.060 | 134 | 83 | 0 | 17 | 150 | 14 | 147 | 4.09e-21 | 90.5 |
| MsG0180005367.01.T02 | AT2G28315 | 38.235 | 136 | 84 | 0 | 17 | 152 | 14 | 149 | 4.23e-21 | 90.9 |
| MsG0180005367.01.T02 | AT2G28315 | 36.449 | 107 | 55 | 3 | 151 | 245 | 225 | 330 | 9.40e-11 | 61.2 |
| MsG0180005367.01.T02 | AT1G06890 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 1.17e-17 | 81.3 |
| MsG0180005367.01.T02 | AT1G06890 | 35.714 | 98 | 58 | 3 | 151 | 245 | 225 | 320 | 3.15e-12 | 65.9 |
| MsG0180005367.01.T02 | AT1G06890 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 1.17e-17 | 81.3 |
| MsG0180005367.01.T02 | AT1G06890 | 35.714 | 98 | 58 | 3 | 151 | 245 | 225 | 320 | 3.15e-12 | 65.9 |
| MsG0180005367.01.T02 | AT1G06890 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 1.26e-17 | 81.3 |
| MsG0180005367.01.T02 | AT1G06890 | 35.714 | 98 | 58 | 3 | 151 | 245 | 225 | 320 | 3.29e-12 | 65.9 |
| MsG0180005367.01.T02 | AT1G06890 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 1.40e-17 | 81.3 |
| MsG0180005367.01.T02 | AT1G06890 | 35.714 | 98 | 58 | 3 | 151 | 245 | 225 | 320 | 3.60e-12 | 65.5 |
| MsG0180005367.01.T02 | AT2G30460 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 3.30e-17 | 80.1 |
| MsG0180005367.01.T02 | AT2G30460 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 5.06e-17 | 79.7 |
| MsG0180005367.01.T02 | AT2G30460 | 41.429 | 70 | 40 | 1 | 151 | 220 | 225 | 293 | 1.39e-11 | 63.9 |
| MsG0180005367.01.T02 | AT2G30460 | 40.496 | 121 | 72 | 0 | 32 | 152 | 29 | 149 | 5.06e-17 | 79.7 |
| MsG0180005367.01.T02 | AT2G30460 | 41.429 | 70 | 40 | 1 | 151 | 220 | 225 | 293 | 1.39e-11 | 63.9 |
| MsG0180005367.01.T02 | AT5G55950 | 37.778 | 135 | 80 | 2 | 20 | 150 | 63 | 197 | 6.99e-16 | 75.9 |
| MsG0180005367.01.T02 | AT5G55950 | 37.143 | 140 | 74 | 2 | 20 | 150 | 3 | 137 | 1.20e-15 | 75.5 |
| MsG0180005367.01.T02 | AT5G55950 | 37.143 | 140 | 74 | 2 | 20 | 150 | 63 | 197 | 1.45e-15 | 75.5 |
| MsG0180005367.01.T02 | AT5G57100 | 30.323 | 155 | 100 | 3 | 3 | 150 | 51 | 204 | 1.17e-12 | 66.2 |
| MsG0180005367.01.T02 | AT5G57100 | 33.088 | 136 | 85 | 2 | 20 | 150 | 70 | 204 | 1.79e-12 | 66.2 |
| MsG0180005367.01.T02 | AT5G57100 | 30.323 | 155 | 100 | 3 | 3 | 150 | 51 | 204 | 3.79e-12 | 65.9 |
| MsG0180005367.01.T02 | AT2G30460 | 38.532 | 109 | 67 | 0 | 44 | 152 | 20 | 128 | 5.74e-12 | 64.7 |
| MsG0180005367.01.T02 | AT2G30460 | 40.845 | 71 | 41 | 1 | 151 | 221 | 204 | 273 | 1.22e-11 | 63.9 |
| MsG0180005367.01.T02 | AT2G30460 | 38.532 | 109 | 67 | 0 | 44 | 152 | 20 | 128 | 5.74e-12 | 64.7 |
| MsG0180005367.01.T02 | AT2G30460 | 40.845 | 71 | 41 | 1 | 151 | 221 | 204 | 273 | 1.22e-11 | 63.9 |
| MsG0180005367.01.T02 | AT2G30460 | 38.532 | 109 | 67 | 0 | 44 | 152 | 20 | 128 | 5.74e-12 | 64.7 |
| MsG0180005367.01.T02 | AT2G30460 | 40.845 | 71 | 41 | 1 | 151 | 221 | 204 | 273 | 1.22e-11 | 63.9 |
Find 40 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTCAGCTTTGCTTGA+AGG | 0.285443 | 1:+90879647 | None:intergenic |
| GGTGGTTATGGCTTCAGTTT+TGG | 0.294456 | 1:-90879545 | MsG0180005367.01.T01:intron |
| CATTGTAAACAAAGCTTTGA+TGG | 0.302927 | 1:-90879567 | MsG0180005367.01.T01:CDS |
| AACAAAGAAGCCTGGCAAAA+TGG | 0.330737 | 1:+90879776 | None:intergenic |
| ATTGAGTGTATCACTTTAGA+TGG | 0.347199 | 1:-90880027 | MsG0180005367.01.T01:intron |
| AAAGCTTTGATGGGTGGTTA+TGG | 0.350738 | 1:-90879557 | MsG0180005367.01.T01:CDS |
| GGAGTTTGCAGATTGATTGC+AGG | 0.390540 | 1:+90880567 | None:intergenic |
| AGATTGTTGTTAATTGTGTT+TGG | 0.399409 | 1:-90880609 | None:intergenic |
| GAGATCCGTGTGAAGTTTGA+AGG | 0.406091 | 1:-90879688 | MsG0180005367.01.T01:five_prime_UTR |
| TGAAAGTGGAGGGAATGTTA+TGG | 0.419562 | 1:-90879724 | MsG0180005367.01.T01:five_prime_UTR |
| AAAGAAAGGTGGGGTGTGTT+GGG | 0.420540 | 1:+90880513 | None:intergenic |
| AAAAGAAAGGTGGGGTGTGT+TGG | 0.426524 | 1:+90880512 | None:intergenic |
| GATTGTTGTTAATTGTGTTT+GGG | 0.443324 | 1:-90880608 | None:intergenic |
| TTCAATGTTGTCACATCTGT+TGG | 0.444323 | 1:-90879596 | MsG0180005367.01.T01:CDS |
| TGAGGTTGAAAGGAGTTGTA+TGG | 0.444590 | 1:+90880546 | None:intergenic |
| CATCCATGCCGCAGCATCTA+CGG | 0.452040 | 1:+90879619 | None:intergenic |
| TTCAAGCAAAGCTGAGAAGA+AGG | 0.460573 | 1:-90879645 | MsG0180005367.01.T01:CDS |
| TTGCAGATTGATTGCAGGAG+TGG | 0.507351 | 1:+90880572 | None:intergenic |
| ACTCCTGCATTATTTGAAAG+TGG | 0.523920 | 1:-90879738 | MsG0180005367.01.T01:five_prime_UTR |
| CCTCCACTTTCAAATAATGC+AGG | 0.524868 | 1:+90879735 | None:intergenic |
| AAGAATGATCTGAGGTTGAA+AGG | 0.535238 | 1:+90880536 | None:intergenic |
| ATTGTAAACAAAGCTTTGAT+GGG | 0.537492 | 1:-90879566 | MsG0180005367.01.T01:CDS |
| CAGCCGTAGATGCTGCGGCA+TGG | 0.544538 | 1:-90879622 | MsG0180005367.01.T01:CDS |
| AAAAGGAAGCTAACCGTGGA+TGG | 0.545489 | 1:+90880477 | None:intergenic |
| CTGCATTATTTGAAAGTGGA+GGG | 0.545733 | 1:-90879734 | MsG0180005367.01.T01:five_prime_UTR |
| CGATAGTGTGAATTCAAAAG+TGG | 0.547883 | 1:+90879929 | None:intergenic |
| TGTGAATAGAAAAGAAAGGT+GGG | 0.563376 | 1:+90880503 | None:intergenic |
| TCTATTCACACCTCCATCCA+CGG | 0.564926 | 1:-90880490 | MsG0180005367.01.T01:intron |
| GTAAACAAAGCTTTGATGGG+TGG | 0.567414 | 1:-90879563 | MsG0180005367.01.T01:CDS |
| CCTGCATTATTTGAAAGTGG+AGG | 0.582054 | 1:-90879735 | MsG0180005367.01.T01:five_prime_UTR |
| TTAATCCTTCAAACTTCACA+CGG | 0.586224 | 1:+90879683 | None:intergenic |
| AAGAAGCCTGGCAAAATGGA+AGG | 0.591306 | 1:+90879780 | None:intergenic |
| GTGTGAATAGAAAAGAAAGG+TGG | 0.595894 | 1:+90880502 | None:intergenic |
| TTTACACAAACAAAGAAGCC+TGG | 0.596406 | 1:+90879768 | None:intergenic |
| AAGTGGAGGGAATGTTATGG+AGG | 0.604217 | 1:-90879721 | MsG0180005367.01.T01:five_prime_UTR |
| GAAGGCAGCCGTAGATGCTG+CGG | 0.628788 | 1:-90879627 | MsG0180005367.01.T01:CDS |
| GAGGTGTGAATAGAAAAGAA+AGG | 0.629980 | 1:+90880499 | None:intergenic |
| AGGAAGCTAACCGTGGATGG+AGG | 0.649164 | 1:+90880480 | None:intergenic |
| GTGTTGGGAAGAATGATCTG+AGG | 0.705801 | 1:+90880528 | None:intergenic |
| GTGAATAGAAAAGAAAGGTG+GGG | 0.716134 | 1:+90880504 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGTAAATAAACAATTTA+AGG | + | Chr1:90878804-90878823 | None:intergenic | 10.0% |
| !! | AATATAAATTTGATATAACA+AGG | + | Chr1:90879752-90879771 | None:intergenic | 10.0% |
| !!! | ATTTATTTGAATTTTTGAAT+TGG | - | Chr1:90877154-90877173 | MsG0180005367.01.T01:intron | 10.0% |
| !! | AATTTAAAGAATTACAAATG+AGG | + | Chr1:90880592-90880611 | None:intergenic | 15.0% |
| !! | GCATATAATTATATTCTAAA+CGG | + | Chr1:90879977-90879996 | None:intergenic | 15.0% |
| !! | TAAAAGAAAATCATACTTAA+AGG | + | Chr1:90877863-90877882 | None:intergenic | 15.0% |
| !! | TAAAATAATTAAAACCAGTA+AGG | + | Chr1:90880568-90880587 | None:intergenic | 15.0% |
| !! | TAGAATATAATTATATGCTT+AGG | - | Chr1:90879979-90879998 | MsG0180005367.01.T01:intron | 15.0% |
| !!! | ACAATACTTGTTTTAATAAT+GGG | - | Chr1:90880273-90880292 | MsG0180005367.01.T01:intron | 15.0% |
| !!! | TTAAATTTGATTTCTTGTTT+TGG | - | Chr1:90880605-90880624 | MsG0180005367.01.T01:five_prime_UTR | 15.0% |
| !!! | TTTTATTATATCTTGAACAT+TGG | - | Chr1:90879913-90879932 | MsG0180005367.01.T01:intron | 15.0% |
| !! | AAAAACTATTGTATTCAGAT+AGG | + | Chr1:90877417-90877436 | None:intergenic | 20.0% |
| !! | AAATTAAACGTATAGATACT+TGG | - | Chr1:90879671-90879690 | MsG0180005367.01.T01:exon | 20.0% |
| !! | ATCAATCCAAAAAATGAAAA+AGG | + | Chr1:90876887-90876906 | None:intergenic | 20.0% |
| !! | CAGAAATATCATTAAGAAAT+TGG | + | Chr1:90877774-90877793 | None:intergenic | 20.0% |
| !! | TAAGAAAAATGAAAGAGAAA+AGG | + | Chr1:90876824-90876843 | None:intergenic | 20.0% |
| !! | TATAGAACAAAATTGAGAAT+TGG | - | Chr1:90880069-90880088 | MsG0180005367.01.T01:intron | 20.0% |
| !! | TATATTAATTTAATGCAAGC+AGG | + | Chr1:90879850-90879869 | None:intergenic | 20.0% |
| !! | TTAATCTTCATGTAGTTATA+GGG | - | Chr1:90880322-90880341 | MsG0180005367.01.T01:intron | 20.0% |
| !!! | AAAGAAACAAATTTAACTTC+TGG | + | Chr1:90878125-90878144 | None:intergenic | 20.0% |
| !!! | AAGTTTTATGATATATCAAC+TGG | + | Chr1:90877820-90877839 | None:intergenic | 20.0% |
| !!! | AGTTTTATGATATATCAACT+GGG | + | Chr1:90877819-90877838 | None:intergenic | 20.0% |
| !!! | GAAAACAAATTTTAGAAGTT+CGG | + | Chr1:90877992-90878011 | None:intergenic | 20.0% |
| !!! | GACAATACTTGTTTTAATAA+TGG | - | Chr1:90880272-90880291 | MsG0180005367.01.T01:intron | 20.0% |
| !!! | GTATTTGTTTCTTAGAATTT+GGG | - | Chr1:90878400-90878419 | MsG0180005367.01.T01:intron | 20.0% |
| !!! | TATTTGAAATTAAACCTTAC+TGG | - | Chr1:90880551-90880570 | MsG0180005367.01.T01:five_prime_UTR | 20.0% |
| !!! | TGTATTTGTTTCTTAGAATT+TGG | - | Chr1:90878399-90878418 | MsG0180005367.01.T01:intron | 20.0% |
| !!! | TTGAATTTTTGAATTGGTTT+AGG | - | Chr1:90877160-90877179 | MsG0180005367.01.T01:intron | 20.0% |
| ! | AAGAAAATCATACTTAAAGG+AGG | + | Chr1:90877860-90877879 | None:intergenic | 25.0% |
| ! | AATCTACTTATCAACATACT+TGG | - | Chr1:90879869-90879888 | MsG0180005367.01.T01:intron | 25.0% |
| ! | AATTATCTACACATATTGGA+AGG | + | Chr1:90879782-90879801 | None:intergenic | 25.0% |
| ! | AGAAATCTATAGATGGAATT+GGG | - | Chr1:90878976-90878995 | MsG0180005367.01.T01:intron | 25.0% |
| ! | AGTATGTTCATTATCTTCAA+CGG | - | Chr1:90879471-90879490 | MsG0180005367.01.T01:intron | 25.0% |
| ! | ATGCAATTATCTACACATAT+TGG | + | Chr1:90879786-90879805 | None:intergenic | 25.0% |
| ! | ATGGCAGTTAAAATTCTAAA+TGG | + | Chr1:90878951-90878970 | None:intergenic | 25.0% |
| ! | ATTATATCTTGAACATTGGT+AGG | - | Chr1:90879917-90879936 | MsG0180005367.01.T01:intron | 25.0% |
| ! | CAAGAAGAGAAAAACAAAAA+TGG | - | Chr1:90876933-90876952 | MsG0180005367.01.T01:CDS | 25.0% |
| ! | CATCATTGAAATGTCAAATT+CGG | + | Chr1:90880035-90880054 | None:intergenic | 25.0% |
| ! | CTTAATCTTCATGTAGTTAT+AGG | - | Chr1:90880321-90880340 | MsG0180005367.01.T01:intron | 25.0% |
| ! | GATACTATCTTAGAATTTGA+GGG | - | Chr1:90879134-90879153 | MsG0180005367.01.T01:intron | 25.0% |
| ! | GGATTAAAAATTAGATGCTT+GGG | + | Chr1:90878925-90878944 | None:intergenic | 25.0% |
| ! | TGATACTATCTTAGAATTTG+AGG | - | Chr1:90879133-90879152 | MsG0180005367.01.T01:intron | 25.0% |
| ! | TTGAAGGATTAAAAAGAACA+TGG | - | Chr1:90877609-90877628 | MsG0180005367.01.T01:intron | 25.0% |
| !! | AAGCATCTAATTTTTAATCC+GGG | - | Chr1:90878925-90878944 | MsG0180005367.01.T01:intron | 25.0% |
| !! | ACATTTCAATGATGATGAAA+CGG | - | Chr1:90880041-90880060 | MsG0180005367.01.T01:intron | 25.0% |
| !! | ACGTGATTCAATTTTTAATG+CGG | + | Chr1:90878594-90878613 | None:intergenic | 25.0% |
| !! | ATTGTAAACAAAGCTTTGAT+GGG | - | Chr1:90877715-90877734 | MsG0180005367.01.T01:intron | 25.0% |
| !! | CAAGCATCTAATTTTTAATC+CGG | - | Chr1:90878924-90878943 | MsG0180005367.01.T01:intron | 25.0% |
| !! | TAAATGAAGGGTATACTAAA+TGG | + | Chr1:90878519-90878538 | None:intergenic | 25.0% |
| !! | TAATGGGATTCTTTTTCTTT+GGG | - | Chr1:90880289-90880308 | MsG0180005367.01.T01:intron | 25.0% |
| !! | TGTTTTTCTCTTCTTGAAAT+GGG | + | Chr1:90876929-90876948 | None:intergenic | 25.0% |
| !! | TTTAGACTTTCAATTTTGTG+CGG | - | Chr1:90878825-90878844 | MsG0180005367.01.T01:intron | 25.0% |
| !!! | ACTTCTCCTTTTTCATTTTT+TGG | - | Chr1:90876878-90876897 | MsG0180005367.01.T01:CDS | 25.0% |
| !!! | ATAATGGGATTCTTTTTCTT+TGG | - | Chr1:90880288-90880307 | MsG0180005367.01.T01:intron | 25.0% |
| !!! | TTGTTTTTCTCTTCTTGAAA+TGG | + | Chr1:90876930-90876949 | None:intergenic | 25.0% |
| !!! | TTTGTTTCTTTTTTGACCAT+TGG | - | Chr1:90878134-90878153 | MsG0180005367.01.T01:intron | 25.0% |
| ACAGTATTCACTCATTATGA+TGG | - | Chr1:90880463-90880482 | MsG0180005367.01.T01:intron | 30.0% | |
| ACCATCCAGTATAATAACAA+AGG | + | Chr1:90879726-90879745 | None:intergenic | 30.0% | |
| ACCTAAGTCATATCTTTGTT+CGG | - | Chr1:90879227-90879246 | MsG0180005367.01.T01:CDS | 30.0% | |
| ACTAACTTAATCCCACAAAT+CGG | - | Chr1:90879163-90879182 | MsG0180005367.01.T01:intron | 30.0% | |
| AGTTAAAATTCTAAATGGCC+CGG | + | Chr1:90878946-90878965 | None:intergenic | 30.0% | |
| ATCAGAAACGAATACTAATG+CGG | - | Chr1:90879291-90879310 | MsG0180005367.01.T01:CDS | 30.0% | |
| ATCTATAGATTTCTGACACA+TGG | + | Chr1:90878970-90878989 | None:intergenic | 30.0% | |
| ATGTGTCAGAAATCTATAGA+TGG | - | Chr1:90878969-90878988 | MsG0180005367.01.T01:intron | 30.0% | |
| ATTGAGTGTATCACTTTAGA+TGG | - | Chr1:90877254-90877273 | MsG0180005367.01.T01:intron | 30.0% | |
| CAGAAATCTATAGATGGAAT+TGG | - | Chr1:90878975-90878994 | MsG0180005367.01.T01:intron | 30.0% | |
| CCCATTAATATTGAATGCTA+CGG | + | Chr1:90879431-90879450 | None:intergenic | 30.0% | |
| CCGTAGCATTCAATATTAAT+GGG | - | Chr1:90879428-90879447 | MsG0180005367.01.T01:intron | 30.0% | |
| CGGATTAAAAATTAGATGCT+TGG | + | Chr1:90878926-90878945 | None:intergenic | 30.0% | |
| CTAAAGTGATACACTCAATT+TGG | + | Chr1:90877253-90877272 | None:intergenic | 30.0% | |
| GAATGAATGTCAGTTTAATG+TGG | - | Chr1:90878034-90878053 | MsG0180005367.01.T01:intron | 30.0% | |
| GACAAATAAAAAGACTTGAC+TGG | + | Chr1:90877383-90877402 | None:intergenic | 30.0% | |
| GACACCATATACCAATTAAA+AGG | + | Chr1:90879382-90879401 | None:intergenic | 30.0% | |
| GTATGTGCAATGAATTTCAT+AGG | - | Chr1:90879947-90879966 | MsG0180005367.01.T01:intron | 30.0% | |
| TAGTGCCTAAAAATAAGGTT+TGG | + | Chr1:90879208-90879227 | None:intergenic | 30.0% | |
| TATCTTAGAATTTGAGGGTA+GGG | - | Chr1:90879139-90879158 | MsG0180005367.01.T01:intron | 30.0% | |
| TCCGTAGCATTCAATATTAA+TGG | - | Chr1:90879427-90879446 | MsG0180005367.01.T01:intron | 30.0% | |
| TGATACACTCAATTTGGATT+TGG | + | Chr1:90877247-90877266 | None:intergenic | 30.0% | |
| TGGATTCTATCAAGTAAGTT+CGG | - | Chr1:90878065-90878084 | MsG0180005367.01.T01:intron | 30.0% | |
| TGTGAATAGAAAAGAAAGGT+GGG | + | Chr1:90876781-90876800 | None:intergenic | 30.0% | |
| TGTGTAGACAAGAAAAAACA+AGG | - | Chr1:90878714-90878733 | MsG0180005367.01.T01:intron | 30.0% | |
| TTAATCCTTCAAACTTCACA+CGG | + | Chr1:90877601-90877620 | None:intergenic | 30.0% | |
| TTAGGTAGTGCCTAAAAATA+AGG | + | Chr1:90879213-90879232 | None:intergenic | 30.0% | |
| TTTGCTAACTTCTCTATTGT+TGG | - | Chr1:90878012-90878031 | MsG0180005367.01.T01:intron | 30.0% | |
| ! | AAGAATGGACATTTGAAATG+TGG | - | Chr1:90879063-90879082 | MsG0180005367.01.T01:CDS | 30.0% |
| ! | ACTAAGTTCTTTCAACCTTT+TGG | - | Chr1:90879502-90879521 | MsG0180005367.01.T01:intron | 30.0% |
| ! | AGAATGGACATTTGAAATGT+GGG | - | Chr1:90879064-90879083 | MsG0180005367.01.T01:CDS | 30.0% |
| ! | CATTGTAAACAAAGCTTTGA+TGG | - | Chr1:90877714-90877733 | MsG0180005367.01.T01:intron | 30.0% |
| ! | CGTGATTCAATTTTTAATGC+GGG | + | Chr1:90878593-90878612 | None:intergenic | 30.0% |
| ! | CTAAGTTCTTTCAACCTTTT+GGG | - | Chr1:90879503-90879522 | MsG0180005367.01.T01:intron | 30.0% |
| ! | CTATCAACACTCCTTTTAAT+TGG | - | Chr1:90879368-90879387 | MsG0180005367.01.T01:CDS | 30.0% |
| ! | GAAACAAATTTAACTTCTGG+AGG | + | Chr1:90878122-90878141 | None:intergenic | 30.0% |
| ! | GTTTCTTAGAATTTGGGTTT+GGG | - | Chr1:90878406-90878425 | MsG0180005367.01.T01:intron | 30.0% |
| ! | TGTTACTAAGCTTTTGTGTT+TGG | - | Chr1:90880133-90880152 | MsG0180005367.01.T01:intron | 30.0% |
| ! | TGTTTCTTAGAATTTGGGTT+TGG | - | Chr1:90878405-90878424 | MsG0180005367.01.T01:intron | 30.0% |
| ! | TTAGACTTTCAATTTTGTGC+GGG | - | Chr1:90878826-90878845 | MsG0180005367.01.T01:intron | 30.0% |
| ! | TTTCTTAGAATTTGGGTTTG+GGG | - | Chr1:90878407-90878426 | MsG0180005367.01.T01:intron | 30.0% |
| !! | AATTTTAGAAGTTCGGACAA+TGG | + | Chr1:90877985-90878004 | None:intergenic | 30.0% |
| !! | AGCATAGGTATTGTTCTTTT+GGG | - | Chr1:90878244-90878263 | MsG0180005367.01.T01:intron | 30.0% |
| !! | CACTCCTTTTAATTGGTATA+TGG | - | Chr1:90879375-90879394 | MsG0180005367.01.T01:CDS | 30.0% |
| !! | TTACGCCTTTGTTATTATAC+TGG | - | Chr1:90879718-90879737 | MsG0180005367.01.T01:five_prime_UTR | 30.0% |
| !!! | AAACATGAAAGGTTTTGTTG+CGG | - | Chr1:90878300-90878319 | MsG0180005367.01.T01:intron | 30.0% |
| !!! | ACTGTCCAAACCTTATTTTT+AGG | - | Chr1:90879200-90879219 | MsG0180005367.01.T01:intron | 30.0% |
| AAGCATCTAATGTATCTGTG+TGG | - | Chr1:90878877-90878896 | MsG0180005367.01.T01:intron | 35.0% | |
| AATGCATACAGATCCAAGAA+AGG | + | Chr1:90877039-90877058 | None:intergenic | 35.0% | |
| ACCGAACAAAGATATGACTT+AGG | + | Chr1:90879231-90879250 | None:intergenic | 35.0% | |
| ACTCCTGCATTATTTGAAAG+TGG | - | Chr1:90877543-90877562 | MsG0180005367.01.T01:intron | 35.0% | |
| AGATGGAATTGGGTAAATAG+AGG | - | Chr1:90878986-90879005 | MsG0180005367.01.T01:intron | 35.0% | |
| AGCATCTAATGTATCTGTGT+GGG | - | Chr1:90878878-90878897 | MsG0180005367.01.T01:intron | 35.0% | |
| AGTTTAATGTGGAACTCAGT+TGG | - | Chr1:90878045-90878064 | MsG0180005367.01.T01:intron | 35.0% | |
| ATCTCTCTCACACTTAAGAA+TGG | - | Chr1:90879048-90879067 | MsG0180005367.01.T01:CDS | 35.0% | |
| ATCTGCCAATGCAGATAAAT+TGG | + | Chr1:90880215-90880234 | None:intergenic | 35.0% | |
| ATCTTAGAATTTGAGGGTAG+GGG | - | Chr1:90879140-90879159 | MsG0180005367.01.T01:intron | 35.0% | |
| ATGCATACAGATCCAAGAAA+GGG | + | Chr1:90877038-90877057 | None:intergenic | 35.0% | |
| CAAACAAACTTCCAATAAGC+AGG | + | Chr1:90878191-90878210 | None:intergenic | 35.0% | |
| CGATAGTGTGAATTCAAAAG+TGG | + | Chr1:90877355-90877374 | None:intergenic | 35.0% | |
| CTATCTTAGAATTTGAGGGT+AGG | - | Chr1:90879138-90879157 | MsG0180005367.01.T01:intron | 35.0% | |
| CTGCATTATTTGAAAGTGGA+GGG | - | Chr1:90877547-90877566 | MsG0180005367.01.T01:intron | 35.0% | |
| CTTAAGTGTGAGAGAGATAT+AGG | + | Chr1:90879046-90879065 | None:intergenic | 35.0% | |
| GAAGGAATTGGGTAAATGAA+GGG | + | Chr1:90878531-90878550 | None:intergenic | 35.0% | |
| GACGTAAGTGTAAACATGAA+AGG | - | Chr1:90878289-90878308 | MsG0180005367.01.T01:intron | 35.0% | |
| GAGGTGTGAATAGAAAAGAA+AGG | + | Chr1:90876785-90876804 | None:intergenic | 35.0% | |
| GATAGAATCGAACTTTGTTC+AGG | + | Chr1:90878635-90878654 | None:intergenic | 35.0% | |
| GATGTGATAGATTGAGAATG+TGG | + | Chr1:90876847-90876866 | None:intergenic | 35.0% | |
| GCTCAAACCTTATAAGAACT+TGG | - | Chr1:90878470-90878489 | MsG0180005367.01.T01:intron | 35.0% | |
| GGAAATCTATGGAAGGAATT+GGG | + | Chr1:90878542-90878561 | None:intergenic | 35.0% | |
| GGTAGTACCAAGTTCTTATA+AGG | + | Chr1:90878480-90878499 | None:intergenic | 35.0% | |
| GTGAATAGAAAAGAAAGGTG+GGG | + | Chr1:90876780-90876799 | None:intergenic | 35.0% | |
| GTGTGAATAGAAAAGAAAGG+TGG | + | Chr1:90876782-90876801 | None:intergenic | 35.0% | |
| TACACTCAATTTGGATTTGG+TGG | + | Chr1:90877244-90877263 | None:intergenic | 35.0% | |
| TACAGGGATCATACTCAATT+TGG | + | Chr1:90878167-90878186 | None:intergenic | 35.0% | |
| TCAACCAATAGTCTAGAAGA+GGG | + | Chr1:90879571-90879590 | None:intergenic | 35.0% | |
| TCAGAAACGAATACTAATGC+GGG | - | Chr1:90879292-90879311 | MsG0180005367.01.T01:CDS | 35.0% | |
| TCTTCATATGTCCAAGTACT+TGG | + | Chr1:90880254-90880273 | None:intergenic | 35.0% | |
| TTATCCAGAACTTACCAAAG+AGG | + | Chr1:90879630-90879649 | None:intergenic | 35.0% | |
| TTCAATGTTGTCACATCTGT+TGG | - | Chr1:90877685-90877704 | MsG0180005367.01.T01:intron | 35.0% | |
| TTTACACAAACAAAGAAGCC+TGG | + | Chr1:90877516-90877535 | None:intergenic | 35.0% | |
| TTTCTTGGATCTGTATGCAT+TGG | - | Chr1:90877038-90877057 | MsG0180005367.01.T01:CDS | 35.0% | |
| ! | AAGAATGATCTGAGGTTGAA+AGG | + | Chr1:90876748-90876767 | None:intergenic | 35.0% |
| ! | ACAGCAAGATAGTTGATTCT+AGG | - | Chr1:90880514-90880533 | MsG0180005367.01.T01:five_prime_UTR | 35.0% |
| ! | CACCTTACAAGTCAATTTTG+AGG | + | Chr1:90878445-90878464 | None:intergenic | 35.0% |
| ! | CTGCTTATTGGAAGTTTGTT+TGG | - | Chr1:90878189-90878208 | MsG0180005367.01.T01:intron | 35.0% |
| ! | GCTGGATCACTATTGTTATT+GGG | - | Chr1:90879545-90879564 | MsG0180005367.01.T01:intron | 35.0% |
| ! | TTTTTCTTGTCTACACAGCA+TGG | + | Chr1:90878711-90878730 | None:intergenic | 35.0% |
| !! | CACCTCAAAATTGACTTGTA+AGG | - | Chr1:90878440-90878459 | MsG0180005367.01.T01:intron | 35.0% |
| !! | GAGCATAGGTATTGTTCTTT+TGG | - | Chr1:90878243-90878262 | MsG0180005367.01.T01:intron | 35.0% |
| !! | GCCTTTGTTATTATACTGGA+TGG | - | Chr1:90879722-90879741 | MsG0180005367.01.T01:five_prime_UTR | 35.0% |
| !! | TAAGCTTTTGTGTTTGGCTT+TGG | - | Chr1:90880139-90880158 | MsG0180005367.01.T01:intron | 35.0% |
| !! | TTAAAAGGAGTGTTGATAGC+AGG | + | Chr1:90879367-90879386 | None:intergenic | 35.0% |
| !!! | TTTTTTGAATGCCACCCTTA+TGG | - | Chr1:90877003-90877022 | MsG0180005367.01.T01:CDS | 35.0% |
| AACAAAGAAGCCTGGCAAAA+TGG | + | Chr1:90877508-90877527 | None:intergenic | 40.0% | |
| AATGGAGCAAAGTTGAACTC+AGG | + | Chr1:90878501-90878520 | None:intergenic | 40.0% | |
| ACTTCCAATAAGCAGGATAC+AGG | + | Chr1:90878184-90878203 | None:intergenic | 40.0% | |
| AGAGACACAAAACTGAGCAT+AGG | - | Chr1:90878229-90878248 | MsG0180005367.01.T01:intron | 40.0% | |
| CAATGCAGATAAATTGGCTG+AGG | + | Chr1:90880209-90880228 | None:intergenic | 40.0% | |
| CATCTAATGTATCTGTGTGG+GGG | - | Chr1:90878880-90878899 | MsG0180005367.01.T01:intron | 40.0% | |
| CCTCCACTTTCAAATAATGC+AGG | + | Chr1:90877549-90877568 | None:intergenic | 40.0% | |
| CCTGCATTATTTGAAAGTGG+AGG | - | Chr1:90877546-90877565 | MsG0180005367.01.T01:intron | 40.0% | |
| CGGAAATCTATGGAAGGAAT+TGG | + | Chr1:90878543-90878562 | None:intergenic | 40.0% | |
| CTACCAGCAAAACAGAAAGT+CGG | - | Chr1:90880430-90880449 | MsG0180005367.01.T01:intron | 40.0% | |
| CTCAGCCAATTTATCTGCAT+TGG | - | Chr1:90880207-90880226 | MsG0180005367.01.T01:intron | 40.0% | |
| CTCTTCTCCTTGCCTTTATA+TGG | - | Chr1:90878657-90878676 | MsG0180005367.01.T01:intron | 40.0% | |
| CTTCCAATAAGCAGGATACA+GGG | + | Chr1:90878183-90878202 | None:intergenic | 40.0% | |
| GAAATTTAACTGCCACGTGT+CGG | + | Chr1:90878563-90878582 | None:intergenic | 40.0% | |
| GCATCTAATGTATCTGTGTG+GGG | - | Chr1:90878879-90878898 | MsG0180005367.01.T01:intron | 40.0% | |
| GCTGTATCTTTCCAAGTACT+TGG | - | Chr1:90880240-90880259 | MsG0180005367.01.T01:intron | 40.0% | |
| GGAAGGAATTGGGTAAATGA+AGG | + | Chr1:90878532-90878551 | None:intergenic | 40.0% | |
| GGCTGGATCACTATTGTTAT+TGG | - | Chr1:90879544-90879563 | MsG0180005367.01.T01:intron | 40.0% | |
| GGGATGATAATAGCTGTTGT+TGG | - | Chr1:90880342-90880361 | MsG0180005367.01.T01:intron | 40.0% | |
| GTCAACCAATAGTCTAGAAG+AGG | + | Chr1:90879572-90879591 | None:intergenic | 40.0% | |
| GTTGTTGGAATGATGTGGTA+TGG | - | Chr1:90880357-90880376 | MsG0180005367.01.T01:intron | 40.0% | |
| TAGCTGTTGTTGGAATGATG+TGG | - | Chr1:90880352-90880371 | MsG0180005367.01.T01:intron | 40.0% | |
| TCAATTTGGCAATCTGCCAA+TGG | + | Chr1:90878153-90878172 | None:intergenic | 40.0% | |
| TGAAAGTGGAGGGAATGTTA+TGG | - | Chr1:90877557-90877576 | MsG0180005367.01.T01:intron | 40.0% | |
| TGAGGTTGAAAGGAGTTGTA+TGG | + | Chr1:90876738-90876757 | None:intergenic | 40.0% | |
| TGCATACAGATCCAAGAAAG+GGG | + | Chr1:90877037-90877056 | None:intergenic | 40.0% | |
| TGTACTCCACACTGCTATAA+AGG | + | Chr1:90878326-90878345 | None:intergenic | 40.0% | |
| TGTCATGCACTATTGCAGTT+GGG | - | Chr1:90880178-90880197 | MsG0180005367.01.T01:intron | 40.0% | |
| TTCAAGCAAAGCTGAGAAGA+AGG | - | Chr1:90877636-90877655 | MsG0180005367.01.T01:intron | 40.0% | |
| TTCTACTCTTGAGTGTGAGA+GGG | + | Chr1:90879271-90879290 | None:intergenic | 40.0% | |
| TTCTTCTCAGCTTTGCTTGA+AGG | + | Chr1:90877637-90877656 | None:intergenic | 40.0% | |
| TTTCTACTCTTGAGTGTGAG+AGG | + | Chr1:90879272-90879291 | None:intergenic | 40.0% | |
| ! | AAAGCTTTGATGGGTGGTTA+TGG | - | Chr1:90877724-90877743 | MsG0180005367.01.T01:intron | 40.0% |
| ! | AGTCATATCTTTGTTCGGTG+TGG | - | Chr1:90879232-90879251 | MsG0180005367.01.T01:CDS | 40.0% |
| ! | ATGGACATTTGAAATGTGGG+TGG | - | Chr1:90879067-90879086 | MsG0180005367.01.T01:CDS | 40.0% |
| ! | GACTTTCTGTTTTGCTGGTA+GGG | + | Chr1:90880431-90880450 | None:intergenic | 40.0% |
| ! | GTAAACAAAGCTTTGATGGG+TGG | - | Chr1:90877718-90877737 | MsG0180005367.01.T01:intron | 40.0% |
| ! | TGGGATTCTTTTTCTTTGGG+AGG | - | Chr1:90880292-90880311 | MsG0180005367.01.T01:intron | 40.0% |
| ! | TTATGACCTTCCATTTTGCC+AGG | - | Chr1:90877495-90877514 | MsG0180005367.01.T01:intron | 40.0% |
| !! | CATCTTACTAGCCGATTTGT+GGG | + | Chr1:90879177-90879196 | None:intergenic | 40.0% |
| !! | GGCTGACTTTCTCTCTATTT+TGG | - | Chr1:90878086-90878105 | MsG0180005367.01.T01:intron | 40.0% |
| !! | GGGATTCTTTTTCTTTGGGA+GGG | - | Chr1:90880293-90880312 | MsG0180005367.01.T01:intron | 40.0% |
| !! | GGTATTGTTCTTTTGGGAGT+TGG | - | Chr1:90878250-90878269 | MsG0180005367.01.T01:intron | 40.0% |
| !! | GTCATATCTTTGTTCGGTGT+GGG | - | Chr1:90879233-90879252 | MsG0180005367.01.T01:CDS | 40.0% |
| !! | TCATCTTACTAGCCGATTTG+TGG | + | Chr1:90879178-90879197 | None:intergenic | 40.0% |
| !! | TTAACTTCTGGAGGCACTAA+TGG | + | Chr1:90878113-90878132 | None:intergenic | 40.0% |
| !! | TTCTTTTTCTTTGGGAGGGA+AGG | - | Chr1:90880297-90880316 | MsG0180005367.01.T01:intron | 40.0% |
| AAAAGAAAGGTGGGGTGTGT+TGG | + | Chr1:90876772-90876791 | None:intergenic | 45.0% | |
| AAAAGGAAGCTAACCGTGGA+TGG | + | Chr1:90876807-90876826 | None:intergenic | 45.0% | |
| AAAGAAAGGTGGGGTGTGTT+GGG | + | Chr1:90876771-90876790 | None:intergenic | 45.0% | |
| AAAGGGGTCTCAGATCCATA+AGG | + | Chr1:90877021-90877040 | None:intergenic | 45.0% | |
| AAGAAGCCTGGCAAAATGGA+AGG | + | Chr1:90877504-90877523 | None:intergenic | 45.0% | |
| AAGGGGTCTCAGATCCATAA+GGG | + | Chr1:90877020-90877039 | None:intergenic | 45.0% | |
| AAGTGGAGGGAATGTTATGG+AGG | - | Chr1:90877560-90877579 | MsG0180005367.01.T01:intron | 45.0% | |
| ACAATGGAAGATGAGATGGC+TGG | + | Chr1:90877969-90877988 | None:intergenic | 45.0% | |
| ACGTGTCGGAAATCTATGGA+AGG | + | Chr1:90878549-90878568 | None:intergenic | 45.0% | |
| AGAGAAAAGGAAGCTAACCG+TGG | + | Chr1:90876811-90876830 | None:intergenic | 45.0% | |
| CAACTGCAATAGTGCATGAC+AGG | + | Chr1:90880179-90880198 | None:intergenic | 45.0% | |
| CTATCATGACGCTCGTACTA+CGG | - | Chr1:90877929-90877948 | MsG0180005367.01.T01:intron | 45.0% | |
| CTGTCATGCACTATTGCAGT+TGG | - | Chr1:90880177-90880196 | MsG0180005367.01.T01:intron | 45.0% | |
| GAAACGAATACTAATGCGGG+TGG | - | Chr1:90879295-90879314 | MsG0180005367.01.T01:CDS | 45.0% | |
| GAGATCCGTGTGAAGTTTGA+AGG | - | Chr1:90877593-90877612 | MsG0180005367.01.T01:intron | 45.0% | |
| GATCCCTGTATCCTGCTTAT+TGG | - | Chr1:90878177-90878196 | MsG0180005367.01.T01:intron | 45.0% | |
| GCAGATAAATTGGCTGAGGT+TGG | + | Chr1:90880205-90880224 | None:intergenic | 45.0% | |
| GGAGTTTGCAGATTGATTGC+AGG | + | Chr1:90876717-90876736 | None:intergenic | 45.0% | |
| GTGTTGGGAAGAATGATCTG+AGG | + | Chr1:90876756-90876775 | None:intergenic | 45.0% | |
| TATCATGACGCTCGTACTAC+GGG | - | Chr1:90877930-90877949 | MsG0180005367.01.T01:intron | 45.0% | |
| TCGGACAATGGAAGATGAGA+TGG | + | Chr1:90877973-90877992 | None:intergenic | 45.0% | |
| TCTATTCACACCTCCATCCA+CGG | - | Chr1:90876791-90876810 | MsG0180005367.01.T01:three_prime_UTR | 45.0% | |
| TTCCATAGATTTCCGACACG+TGG | - | Chr1:90878548-90878567 | MsG0180005367.01.T01:intron | 45.0% | |
| TTCTTACGATGCAGCCTCTT+TGG | - | Chr1:90879613-90879632 | MsG0180005367.01.T01:CDS | 45.0% | |
| TTGCAGATTGATTGCAGGAG+TGG | + | Chr1:90876712-90876731 | None:intergenic | 45.0% | |
| ! | CGACTTTCTGTTTTGCTGGT+AGG | + | Chr1:90880432-90880451 | None:intergenic | 45.0% |
| ! | GGTGGTTATGGCTTCAGTTT+TGG | - | Chr1:90877736-90877755 | MsG0180005367.01.T01:intron | 45.0% |
| ! | TGGTAATGCCTCATCAAAGC+CGG | - | Chr1:90880377-90880396 | MsG0180005367.01.T01:intron | 45.0% |
| !!! | TCACCGACTTTCTGTTTTGC+TGG | + | Chr1:90880436-90880455 | None:intergenic | 45.0% |
| AATAGTGATCCAGCCTGTGC+GGG | + | Chr1:90879539-90879558 | None:intergenic | 50.0% | |
| AGTGCGCGACGTCCATATAA+AGG | + | Chr1:90878672-90878691 | None:intergenic | 50.0% | |
| CAATAGTGATCCAGCCTGTG+CGG | + | Chr1:90879540-90879559 | None:intergenic | 50.0% | |
| CCTGCAGCTACAACGTTAAC+GGG | - | Chr1:90877886-90877905 | MsG0180005367.01.T01:intron | 50.0% | |
| GCAGCCTCTTTGGTAAGTTC+TGG | - | Chr1:90879623-90879642 | MsG0180005367.01.T01:CDS | 50.0% | |
| GCCTGCAGCTACAACGTTAA+CGG | - | Chr1:90877885-90877904 | MsG0180005367.01.T01:intron | 50.0% | |
| GCGACGTCCATATAAAGGCA+AGG | + | Chr1:90878667-90878686 | None:intergenic | 50.0% | |
| GGTAATGCCTCATCAAAGCC+GGG | - | Chr1:90880378-90880397 | MsG0180005367.01.T01:intron | 50.0% | |
| TGCCACGTGTCGGAAATCTA+TGG | + | Chr1:90878553-90878572 | None:intergenic | 50.0% | |
| TGGGCCCTCTTCTAGACTAT+TGG | - | Chr1:90879564-90879583 | MsG0180005367.01.T01:CDS | 50.0% | |
| TGTGCGGGTAAACATCTGTG+CGG | - | Chr1:90878841-90878860 | MsG0180005367.01.T01:intron | 50.0% | |
| TTGCGGCCTTTATAGCAGTG+TGG | - | Chr1:90878317-90878336 | MsG0180005367.01.T01:intron | 50.0% | |
| ! | TGGATCTGAGACCCCTTTCT+TGG | - | Chr1:90877023-90877042 | MsG0180005367.01.T01:CDS | 50.0% |
| AATGCCTCATCAAAGCCGGG+TGG | - | Chr1:90880381-90880400 | MsG0180005367.01.T01:intron | 55.0% | |
| AGGAAGCTAACCGTGGATGG+AGG | + | Chr1:90876804-90876823 | None:intergenic | 55.0% | |
| CATCCATGCCGCAGCATCTA+CGG | + | Chr1:90877665-90877684 | None:intergenic | 55.0% | |
| CCCGTTAACGTTGTAGCTGC+AGG | + | Chr1:90877889-90877908 | None:intergenic | 55.0% | |
| CTCATCAAAGCCGGGTGGAA+AGG | - | Chr1:90880386-90880405 | MsG0180005367.01.T01:intron | 55.0% | |
| CTCCAACGTTCCTTTCCACC+CGG | + | Chr1:90880399-90880418 | None:intergenic | 55.0% | |
| GGGTCTCAGATCCATAAGGG+TGG | + | Chr1:90877017-90877036 | None:intergenic | 55.0% | |
| TCTACACAGCATGGCAGCAG+TGG | + | Chr1:90878702-90878721 | None:intergenic | 55.0% | |
| ! | CGGGTGCTGTATGTCCCAAA+AGG | + | Chr1:90879520-90879539 | None:intergenic | 55.0% |
| ! | CTTTCCACCCGGCTTTGATG+AGG | + | Chr1:90880388-90880407 | None:intergenic | 55.0% |
| ACGCTCGTACTACGGGTGCT+GGG | - | Chr1:90877937-90877956 | MsG0180005367.01.T01:intron | 60.0% | |
| AGCCGGGTGGAAAGGAACGT+TGG | - | Chr1:90880394-90880413 | MsG0180005367.01.T01:intron | 60.0% | |
| GAAGGCAGCCGTAGATGCTG+CGG | - | Chr1:90877654-90877673 | MsG0180005367.01.T01:intron | 60.0% | |
| CAGCCGTAGATGCTGCGGCA+TGG | - | Chr1:90877659-90877678 | MsG0180005367.01.T01:intron | 65.0% | |
| CATACAGCACCCGCACAGGC+TGG | - | Chr1:90879527-90879546 | MsG0180005367.01.T01:intron | 65.0% | |
| GACGCTCGTACTACGGGTGC+TGG | - | Chr1:90877936-90877955 | MsG0180005367.01.T01:intron | 65.0% | |
| GGGACATACAGCACCCGCAC+AGG | - | Chr1:90879523-90879542 | MsG0180005367.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 90876677 | 90880626 | 90876677 | ID=MsG0180005367.01;Name=MsG0180005367.01 |
| Chr1 | mRNA | 90876677 | 90880626 | 90876677 | ID=MsG0180005367.01.T01;Parent=MsG0180005367.01;Name=MsG0180005367.01.T01;_AED=0.37;_eAED=0.37;_QI=247|0.75|0.8|1|0.75|0.6|5|171|245 |
| Chr1 | exon | 90879546 | 90879786 | 90879546 | ID=MsG0180005367.01.T01:exon:48108;Parent=MsG0180005367.01.T01 |
| Chr1 | exon | 90880491 | 90880626 | 90880491 | ID=MsG0180005367.01.T01:exon:48107;Parent=MsG0180005367.01.T01 |
| Chr1 | five_prime_UTR | 90880491 | 90880626 | 90880491 | ID=MsG0180005367.01.T01:five_prime_utr;Parent=MsG0180005367.01.T01 |
| Chr1 | five_prime_UTR | 90879676 | 90879786 | 90879676 | ID=MsG0180005367.01.T01:five_prime_utr;Parent=MsG0180005367.01.T01 |
| Chr1 | CDS | 90879546 | 90879675 | 90879546 | ID=MsG0180005367.01.T01:cds;Parent=MsG0180005367.01.T01 |
| Chr1 | CDS | 90879226 | 90879410 | 90879226 | ID=MsG0180005367.01.T01:cds;Parent=MsG0180005367.01.T01 |
| Chr1 | CDS | 90879012 | 90879143 | 90879012 | ID=MsG0180005367.01.T01:cds;Parent=MsG0180005367.01.T01 |
| Chr1 | CDS | 90876848 | 90877138 | 90876848 | ID=MsG0180005367.01.T01:cds;Parent=MsG0180005367.01.T01 |
| Chr1 | three_prime_UTR | 90876677 | 90876847 | 90876677 | ID=MsG0180005367.01.T01:three_prime_utr;Parent=MsG0180005367.01.T01 |
| Chr1 | mRNA | 90876677 | 90880037 | 90876677 | ID=MsG0180005367.01.T02;Parent=MsG0180005367.01;Name=MsG0180005367.01.T02;_AED=0.35;_eAED=0.35;_QI=362|0.66|0.75|1|1|1|4|171|245 |
| Chr1 | exon | 90879546 | 90880037 | 90879546 | ID=MsG0180005367.01.T02:exon:48112;Parent=MsG0180005367.01.T02 |
| Chr1 | five_prime_UTR | 90879676 | 90880037 | 90879676 | ID=MsG0180005367.01.T02:five_prime_utr;Parent=MsG0180005367.01.T02 |
| Chr1 | CDS | 90879546 | 90879675 | 90879546 | ID=MsG0180005367.01.T02:cds;Parent=MsG0180005367.01.T02 |
| Chr1 | CDS | 90879226 | 90879410 | 90879226 | ID=MsG0180005367.01.T02:cds;Parent=MsG0180005367.01.T02 |
| Chr1 | CDS | 90879012 | 90879143 | 90879012 | ID=MsG0180005367.01.T02:cds;Parent=MsG0180005367.01.T02 |
| Chr1 | CDS | 90876848 | 90877138 | 90876848 | ID=MsG0180005367.01.T02:cds;Parent=MsG0180005367.01.T02 |
| Chr1 | three_prime_UTR | 90876677 | 90876847 | 90876677 | ID=MsG0180005367.01.T02:three_prime_utr;Parent=MsG0180005367.01.T02 |
| Gene Sequence |
| Protein sequence |
