AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019670.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019670.01.T01 MTR_0173s0030 94.231 416 5 1 1 416 1 397 0.0 785
MsG0480019670.01.T01 MTR_2g034320 46.591 88 28 4 116 202 20 89 7.75e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019670.01.T01 AT5G42970 80.048 416 64 1 1 416 1 397 0.0 674

Find 98 sgRNAs with CRISPR-Local

Find 532 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTATATATCAGGTGTATT+TGG 0.162807 4:+24457208 MsG0480019670.01.T01:intron
TTCCTGAATCATCCTTCTTT+TGG 0.167521 4:+24458852 MsG0480019670.01.T01:three_prime_UTR
TCTGCAAAAGCATCAATTTC+AGG 0.220902 4:-24457248 None:intergenic
TTTGGTTATTAGAGAGAAAT+TGG 0.222768 4:+24454052 MsG0480019670.01.T01:CDS
ACTGTTCTATCTTCTGTCTT+TGG 0.232195 4:-24451591 None:intergenic
CAAATTGAGAAAAGGCAAAT+AGG 0.242371 4:+24454824 MsG0480019670.01.T01:CDS
CTAACGGAGTTGAAGGGTTT+TGG 0.247220 4:-24451352 None:intergenic
CATTAATAAAGCATCATTCT+TGG 0.283000 4:+24454593 MsG0480019670.01.T01:CDS
GGTCAATACCACTGAGCATC+TGG 0.308345 4:-24454115 None:intergenic
TCAAGCTCTAAATGATGTTT+TGG 0.311421 4:+24458756 MsG0480019670.01.T01:CDS
GAATGTATAGACAAAGAAAT+TGG 0.365282 4:-24458829 None:intergenic
GAGAGAAACCTTCTGCAGTA+TGG 0.365955 4:-24457120 None:intergenic
AGATCTGAAGAGGAAGTTCT+TGG 0.369986 4:+24454772 MsG0480019670.01.T01:CDS
AAATTGAGAAAAGGCAAATA+GGG 0.370512 4:+24454825 MsG0480019670.01.T01:CDS
TCCAGACAATTTCACTGTGC+TGG 0.378815 4:+24457377 MsG0480019670.01.T01:CDS
GCAAACTTTATACAAATATC+AGG 0.384105 4:+24457436 MsG0480019670.01.T01:CDS
TCTTGTAGCTTTGATGAGTT+AGG 0.384222 4:+24457555 MsG0480019670.01.T01:intron
TGCCGTTACGTGTACAATAT+TGG 0.385486 4:+24456935 MsG0480019670.01.T01:CDS
GGCAATAATCCAAGTCAAAC+AGG 0.393367 4:-24458808 None:intergenic
CCACACGAGGTAAAACATAA+TGG 0.401301 4:-24459011 None:intergenic
GCAATCTCTTTCTGTGTCTC+AGG 0.418879 4:-24452270 None:intergenic
ATTCCTGTTCCTGTTTGACT+TGG 0.429247 4:+24458799 MsG0480019670.01.T01:exon
TGCTGAAGAGTTGGGAAGGT+TGG 0.443905 4:+24452245 MsG0480019670.01.T01:CDS
TCCAGCACAGTGAAATTGTC+TGG 0.443989 4:-24457378 None:intergenic
AATCCAAGTCAAACAGGAAC+AGG 0.449263 4:-24458802 None:intergenic
AGTGTTCTCGTTTGCGTTTG+TGG 0.449817 4:-24451329 None:intergenic
ATCCAAAAGAAGGATGATTC+AGG 0.458208 4:-24458854 None:intergenic
TGTACAATATTGGCAGGTGC+AGG 0.482785 4:+24456945 MsG0480019670.01.T01:CDS
AGCATCAAGAATGATTTATG+AGG 0.485288 4:+24458037 MsG0480019670.01.T01:CDS
CAGTGAAATTGTCTGGAAGA+AGG 0.485991 4:-24457371 None:intergenic
AGTATTGAATTTGAAGTACA+AGG 0.490159 4:+24454635 MsG0480019670.01.T01:CDS
TGTATTTGGAAAGAATTCTT+CGG 0.492392 4:+24457222 MsG0480019670.01.T01:CDS
AGTGGTATTGACCTAGATTC+AGG 0.492697 4:+24454125 MsG0480019670.01.T01:CDS
GATGAGTTAGGCACACTGTT+GGG 0.493284 4:+24457567 MsG0480019670.01.T01:CDS
CAAAACCCTTCAACTCCGTT+AGG 0.494584 4:+24451353 MsG0480019670.01.T01:five_prime_UTR
GATTTATGAGGATAGGATGA+AGG 0.501314 4:+24458049 MsG0480019670.01.T01:CDS
AGTTTACCTAACGGAGTTGA+AGG 0.501352 4:-24451359 None:intergenic
GGGTAATTGATGATAAGTTC+AGG 0.503152 4:+24454263 MsG0480019670.01.T01:intron
AAATTATGTACCTTGGGAGG+TGG 0.506288 4:-24457594 None:intergenic
GAAATTAATGAGGAAGCGCT+TGG 0.507602 4:+24456897 MsG0480019670.01.T01:CDS
ACACTGAAGAGTTGCAAAGA+TGG 0.510433 4:+24458223 MsG0480019670.01.T01:CDS
ACATATCTCAAATTGAGAAA+AGG 0.510694 4:+24454816 MsG0480019670.01.T01:CDS
GATGAAGGGATCTATTGATC+AGG 0.510987 4:+24458064 MsG0480019670.01.T01:CDS
CGATGAACTTCAGAATTAAA+CGG 0.513202 4:-24458970 None:intergenic
AGAAGAATTGAAACCACATC+AGG 0.513961 4:+24457268 MsG0480019670.01.T01:CDS
AACGGTCAAAGTGCAACCAT+TGG 0.515732 4:-24458952 None:intergenic
TGTTCTTGCCACACTGTACA+AGG 0.521177 4:+24456983 MsG0480019670.01.T01:CDS
GAGACCTCATTCCTGAATCT+AGG 0.525371 4:-24454136 None:intergenic
AGTGAAATTGTCTGGAAGAA+GGG 0.526038 4:-24457370 None:intergenic
AGAGAAACCTTCTGCAGTAT+GGG 0.529187 4:-24457119 None:intergenic
TTGGATAGCATGGGCAAGAA+GGG 0.533962 4:+24458775 MsG0480019670.01.T01:CDS
CAAACTTTAATAACCTGATG+TGG 0.534249 4:-24457281 None:intergenic
AAATTAATGAGGAAGCGCTT+GGG 0.534615 4:+24456898 MsG0480019670.01.T01:CDS
CACTGAAGAGTTGCAAAGAT+GGG 0.536188 4:+24458224 MsG0480019670.01.T01:CDS
AATTGCTTGTTTATACCTTG+AGG 0.536370 4:+24454303 MsG0480019670.01.T01:CDS
TCAAATTCAATACTTCATGC+TGG 0.537152 4:-24454626 None:intergenic
AAGAATATGAAGGAATATGA+AGG 0.539850 4:+24459053 MsG0480019670.01.T01:three_prime_UTR
TCTGAAGTTCATCGCGATTG+TGG 0.543078 4:+24458979 MsG0480019670.01.T01:three_prime_UTR
TTTGGATAGCATGGGCAAGA+AGG 0.544420 4:+24458774 MsG0480019670.01.T01:CDS
GTTGCAAAGATGGGACAAGC+AGG 0.550480 4:+24458233 MsG0480019670.01.T01:CDS
TGATGAGTTAGGCACACTGT+TGG 0.554252 4:+24457566 MsG0480019670.01.T01:CDS
CAAATGACATTCTTCAAGCT+AGG 0.557041 4:+24451644 MsG0480019670.01.T01:CDS
GGCTGAGCTTTATGAATCTG+AGG 0.561921 4:+24454073 MsG0480019670.01.T01:CDS
AGCTGACGCGACACTACTAA+AGG 0.562961 4:-24452210 None:intergenic
GATTCTAGCAGTTTATCCAA+TGG 0.563845 4:+24458936 MsG0480019670.01.T01:three_prime_UTR
CAAGAATGATTTATGAGGAT+AGG 0.564825 4:+24458042 MsG0480019670.01.T01:CDS
GATCTATCCCATACTGCAGA+AGG 0.565134 4:+24457112 MsG0480019670.01.T01:CDS
ATATTACAGGGAAATTAATG+AGG 0.565776 4:+24456887 MsG0480019670.01.T01:intron
TGTCTAATGAAAGAATATGA+AGG 0.565921 4:+24459043 MsG0480019670.01.T01:three_prime_UTR
AATTATGTACCTTGGGAGGT+GGG 0.571748 4:-24457593 None:intergenic
GTCAATACCACTGAGCATCT+GGG 0.574024 4:-24454114 None:intergenic
ATTTATGAGGATAGGATGAA+GGG 0.574286 4:+24458050 MsG0480019670.01.T01:CDS
CTAGGATCTTAGATCTGAAG+AGG 0.577929 4:+24454762 MsG0480019670.01.T01:CDS
GAGAAACACTGGCGAAAACA+AGG 0.580229 4:+24451212 None:intergenic
GTTACGTGTACAATATTGGC+AGG 0.588398 4:+24456939 MsG0480019670.01.T01:CDS
TGTACAGTGTGGCAAGAACA+CGG 0.592521 4:-24456980 None:intergenic
CACTACTAAAGGAACATCAT+CGG 0.592738 4:-24452199 None:intergenic
AGCGATTCTATTTCACGCAA+CGG 0.594319 4:+24451285 MsG0480019670.01.T01:five_prime_UTR
TGCCAATATTGTACACGTAA+CGG 0.598388 4:-24456937 None:intergenic
GTTTACCTAACGGAGTTGAA+GGG 0.600700 4:-24451358 None:intergenic
TTTATGAATCTGAGGAGCAA+TGG 0.600846 4:+24454081 MsG0480019670.01.T01:CDS
TTGACCTAGATTCAGGAATG+AGG 0.609769 4:+24454132 MsG0480019670.01.T01:CDS
GTTGGGAATCCCACCTCCCA+AGG 0.613288 4:+24457584 MsG0480019670.01.T01:CDS
GTACAATATTGGCAGGTGCA+GGG 0.613304 4:+24456946 MsG0480019670.01.T01:CDS
GATTATGCTCAATCATAGCT+CGG 0.614554 4:-24457401 None:intergenic
GATTCTATTTCACGCAACGG+AGG 0.616736 4:+24451288 MsG0480019670.01.T01:five_prime_UTR
TTGTTGTGAAACAGTGATGG+AGG 0.617885 4:+24451537 MsG0480019670.01.T01:intron
AATTGAGAAAAGGCAAATAG+GGG 0.620222 4:+24454826 MsG0480019670.01.T01:CDS
AGATATGTCATAATATCGCA+AGG 0.635346 4:-24454801 None:intergenic
AATCTTTACCTTGTACAGTG+TGG 0.647262 4:-24456991 None:intergenic
ATGAAATTATGTACCTTGGG+AGG 0.648793 4:-24457597 None:intergenic
GACAGTCATTTGTCCACACG+AGG 0.650741 4:-24459024 None:intergenic
GTACAGTGTGGCAAGAACAC+GGG 0.653612 4:-24456979 None:intergenic
GCAAGAACACGGGAACGTTG+AGG 0.664537 4:-24456969 None:intergenic
AAAGCTGCCCAGATGCTCAG+TGG 0.700066 4:+24454107 MsG0480019670.01.T01:CDS
TGTTGTGAAACAGTGATGGA+GGG 0.724555 4:+24451538 MsG0480019670.01.T01:intron
TCTTCAAAAGACACAACTCG+AGG 0.728488 4:-24452318 None:intergenic
AAACACTGGCGAAAACAAGG+TGG 0.756698 4:+24451215 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAGAAAAAAAATTGAA+TGG + Chr4:24457838-24457857 MsG0480019670.01.T01:intron 10.0%
!! AACTTAAAAAAATATACAAA+AGG + Chr4:24455823-24455842 MsG0480019670.01.T01:intron 10.0%
!! ACTTAAAAAAATATACAAAA+GGG + Chr4:24455824-24455843 MsG0480019670.01.T01:intron 10.0%
!! TTTACTTCAAAATAAAATTT+AGG - Chr4:24454993-24455012 None:intergenic 10.0%
!!! AATCTTTCAAATTTTTTAAA+AGG - Chr4:24453884-24453903 None:intergenic 10.0%
!!! AATTTTTAATGATTTATTTC+AGG + Chr4:24458173-24458192 MsG0480019670.01.T01:intron 10.0%
!!! ATATAATTTTATATCTGAAA+TGG + Chr4:24454454-24454473 MsG0480019670.01.T01:intron 10.0%
!!! ATCTTTCAAATTTTTTAAAA+GGG - Chr4:24453883-24453902 None:intergenic 10.0%
!!! ATTTTAACTACAAAATAAAT+GGG - Chr4:24452668-24452687 None:intergenic 10.0%
!!! TCAAATTTTAGATATTTTAT+GGG - Chr4:24456708-24456727 None:intergenic 10.0%
!!! TTATTTTGATTTTTTTATCA+GGG + Chr4:24454243-24454262 MsG0480019670.01.T01:intron 10.0%
!!! TTCAAATTTTAGATATTTTA+TGG - Chr4:24456709-24456728 None:intergenic 10.0%
!!! TTTAGTTTAGTTTTTTATTA+GGG + Chr4:24451776-24451795 MsG0480019670.01.T01:intron 10.0%
!!! TTTATTTTGAATTTGAATAT+TGG + Chr4:24453115-24453134 MsG0480019670.01.T01:intron 10.0%
!!! TTTATTTTGATTTTTTTATC+AGG + Chr4:24454242-24454261 MsG0480019670.01.T01:intron 10.0%
!!! TTTTAGTTTAGTTTTTTATT+AGG + Chr4:24451775-24451794 MsG0480019670.01.T01:intron 10.0%
!! CGAATAAATTATAAAAATAC+TGG - Chr4:24455715-24455734 None:intergenic 15.0%
!! CTTAAAAAAATATACAAAAG+GGG + Chr4:24455825-24455844 MsG0480019670.01.T01:intron 15.0%
!! GTTTATGTTACAAATAAAAA+GGG - Chr4:24455257-24455276 None:intergenic 15.0%
!! TAATAAAAACTAAGGAAAAT+AGG - Chr4:24452134-24452153 None:intergenic 15.0%
!! TCGTATATTAATAAAAACTA+AGG - Chr4:24452142-24452161 None:intergenic 15.0%
!! TGATTATTTAATATTTACAG+TGG + Chr4:24457499-24457518 MsG0480019670.01.T01:intron 15.0%
!! TGGGTTAAATAAAATAATAT+GGG + Chr4:24458303-24458322 MsG0480019670.01.T01:intron 15.0%
!! TGTTTATGTTACAAATAAAA+AGG - Chr4:24455258-24455277 None:intergenic 15.0%
!!! AAATAAAGAGAATAACTTTT+TGG - Chr4:24453102-24453121 None:intergenic 15.0%
!!! AAATTATAAAAATACTGGTT+TGG - Chr4:24455710-24455729 None:intergenic 15.0%
!!! AATAAAGAGAATAACTTTTT+GGG - Chr4:24453101-24453120 None:intergenic 15.0%
!!! ATATTTTTTTTTTATTTGCC+AGG + Chr4:24454542-24454561 MsG0480019670.01.T01:intron 15.0%
!!! ATTTTGTAATAACTAGAAAA+AGG - Chr4:24455605-24455624 None:intergenic 15.0%
!!! CATAACTATATACTTTTAAA+AGG + Chr4:24458410-24458429 MsG0480019670.01.T01:intron 15.0%
!!! CATTTATTTTGTAGTTAAAA+TGG + Chr4:24452667-24452686 MsG0480019670.01.T01:intron 15.0%
!!! CATTTTAACTACAAAATAAA+TGG - Chr4:24452669-24452688 None:intergenic 15.0%
!!! TTAGTTTTTATTAATATACG+AGG + Chr4:24452141-24452160 MsG0480019670.01.T01:intron 15.0%
!!! TTGTATATTTTTTTAAGTTG+CGG - Chr4:24455822-24455841 None:intergenic 15.0%
!!! TTTTAATTTCAGAATCATAA+AGG + Chr4:24454510-24454529 MsG0480019670.01.T01:intron 15.0%
!!! TTTTGTAATAACTAGAAAAA+GGG - Chr4:24455604-24455623 None:intergenic 15.0%
!!! TTTTTCTAGTTATTACAAAA+TGG + Chr4:24455604-24455623 MsG0480019670.01.T01:intron 15.0%
!! AAAATAAAGTAAATACCTCA+AGG - Chr4:24454321-24454340 None:intergenic 20.0%
!! AAATACCATAATAATAGTGT+CGG - Chr4:24453380-24453399 None:intergenic 20.0%
!! ACATTATGTATCTTTCTTTA+AGG + Chr4:24453568-24453587 MsG0480019670.01.T01:intron 20.0%
!! ATATATGAGATGACTTTATT+CGG + Chr4:24452050-24452069 MsG0480019670.01.T01:intron 20.0%
!! ATATCATATGATATAGACAT+AGG + Chr4:24452508-24452527 MsG0480019670.01.T01:intron 20.0%
!! ATCAATGAATATCTCAAAAA+TGG + Chr4:24458499-24458518 MsG0480019670.01.T01:intron 20.0%
!! ATCTCTCCATTAAAATTTAT+TGG + Chr4:24455793-24455812 MsG0480019670.01.T01:intron 20.0%
!! ATGAAACACAATTCAATATT+AGG + Chr4:24452480-24452499 MsG0480019670.01.T01:intron 20.0%
!! CATTATATTATTGTCAGTTA+AGG - Chr4:24455283-24455302 None:intergenic 20.0%
!! CCAAAACTAAAGAATTAATT+TGG + Chr4:24455677-24455696 MsG0480019670.01.T01:intron 20.0%
!! CTATTATTATGGTATTTGAT+AGG + Chr4:24453383-24453402 MsG0480019670.01.T01:intron 20.0%
!! GAAAAGACTAATCATATTTA+TGG + Chr4:24452072-24452091 MsG0480019670.01.T01:intron 20.0%
!! TATTTGTCGTATTATAGTTA+TGG - Chr4:24452578-24452597 None:intergenic 20.0%
!! TCATACATTTAATTGTGTTT+AGG + Chr4:24456730-24456749 MsG0480019670.01.T01:intron 20.0%
!! TGGCAGATTTATAATAATTT+AGG - Chr4:24454190-24454209 None:intergenic 20.0%
!! TTATAATAATTTAGGCAAAC+AGG - Chr4:24454182-24454201 None:intergenic 20.0%
!! TTATATTCATATTAAAGACG+TGG - Chr4:24454440-24454459 None:intergenic 20.0%
!!! AAAGAGACATTTTCAAATTT+TGG - Chr4:24454210-24454229 None:intergenic 20.0%
!!! AATTATTTTAACTTCATAGG+GGG + Chr4:24452853-24452872 MsG0480019670.01.T01:intron 20.0%
!!! AGCAATTATTTTAACTTCAT+AGG + Chr4:24452850-24452869 MsG0480019670.01.T01:intron 20.0%
!!! ATACTTTTTAGATTAAGTCT+CGG - Chr4:24453474-24453493 None:intergenic 20.0%
!!! ATATTTACAGTGGTTATTTT+AGG + Chr4:24457509-24457528 MsG0480019670.01.T01:intron 20.0%
!!! ATGAATCCAATAATTGATTT+AGG - Chr4:24453979-24453998 None:intergenic 20.0%
!!! ATGATTGTAATGTTTTGTTT+CGG + Chr4:24452378-24452397 MsG0480019670.01.T01:intron 20.0%
!!! CAATTATTTTAACTTCATAG+GGG + Chr4:24452852-24452871 MsG0480019670.01.T01:intron 20.0%
!!! CAGCATTTAAAATATAATCA+AGG - Chr4:24456842-24456861 None:intergenic 20.0%
!!! CCAAATTAATTCTTTAGTTT+TGG - Chr4:24455680-24455699 None:intergenic 20.0%
!!! GCAATTATTTTAACTTCATA+GGG + Chr4:24452851-24452870 MsG0480019670.01.T01:intron 20.0%
!!! GTGGGTTAAATAAAATAATA+TGG + Chr4:24458302-24458321 MsG0480019670.01.T01:intron 20.0%
!!! TATTTACTTTATTTTGTGCA+AGG + Chr4:24454326-24454345 MsG0480019670.01.T01:intron 20.0%
!!! TCAGTTATTTTTGGAATTTT+TGG + Chr4:24453067-24453086 MsG0480019670.01.T01:intron 20.0%
!!! TGATTATATTTTAAATGCTG+TGG + Chr4:24456842-24456861 MsG0480019670.01.T01:intron 20.0%
!!! TGTATATTTTTTTAAGTTGC+GGG - Chr4:24455821-24455840 None:intergenic 20.0%
!!! TTATCTTCTTTTTATTCAAG+AGG - Chr4:24455504-24455523 None:intergenic 20.0%
!!! TTCAAATTTTTTAAAAGGGT+AGG - Chr4:24453879-24453898 None:intergenic 20.0%
!!! TTGCTTATTTTCGAAATTTA+GGG + Chr4:24451478-24451497 MsG0480019670.01.T01:intron 20.0%
!!! TTTTTCTTTTGAATTGAAGA+GGG + Chr4:24456676-24456695 MsG0480019670.01.T01:intron 20.0%
!!! TTTTTTCTTTTGAATTGAAG+AGG + Chr4:24456675-24456694 MsG0480019670.01.T01:intron 20.0%
! AAAGTCATCTCATATATTAC+TGG - Chr4:24452047-24452066 None:intergenic 25.0%
! AAATACTATGTATTCAAAGG+CGG - Chr4:24453357-24453376 None:intergenic 25.0%
! AAATGAATACAAGGATAAAC+AGG - Chr4:24454724-24454743 None:intergenic 25.0%
! AAATTGAAAGAATAAACCCT+AGG - Chr4:24451710-24451729 None:intergenic 25.0%
! AAATTGAGAAAAGGCAAATA+GGG + Chr4:24454825-24454844 MsG0480019670.01.T01:CDS 25.0%
! AACACAAATATTAACAGACA+TGG - Chr4:24458364-24458383 None:intergenic 25.0%
! AACTACAAAATAAATGGGAA+CGG - Chr4:24452663-24452682 None:intergenic 25.0%
! AAGAATATGAAGGAATATGA+AGG + Chr4:24459053-24459072 MsG0480019670.01.T01:three_prime_UTR 25.0%
! AATAAAGCTTCACAACAAAT+AGG - Chr4:24457799-24457818 None:intergenic 25.0%
! AATAAGTTAAGGTGATATTC+AGG - Chr4:24453038-24453057 None:intergenic 25.0%
! AATCCATATTTGATTGATGT+CGG + Chr4:24454350-24454369 MsG0480019670.01.T01:intron 25.0%
! AATCTCCTAAAACTTAATGA+TGG + Chr4:24458706-24458725 MsG0480019670.01.T01:intron 25.0%
! AATGTGATTCCTTATATATC+AGG + Chr4:24457199-24457218 MsG0480019670.01.T01:intron 25.0%
! ACAAAGCCTAAATCAATTAT+TGG + Chr4:24453970-24453989 MsG0480019670.01.T01:intron 25.0%
! ACATATCTCAAATTGAGAAA+AGG + Chr4:24454816-24454835 MsG0480019670.01.T01:CDS 25.0%
! ACATATGGACTTTATATTAC+AGG + Chr4:24456874-24456893 MsG0480019670.01.T01:intron 25.0%
! ACGTTAAGAACAGAATTTAT+AGG + Chr4:24455118-24455137 MsG0480019670.01.T01:intron 25.0%
! AGAAAAAAAATTGAATGGTG+TGG + Chr4:24457843-24457862 MsG0480019670.01.T01:intron 25.0%
! AGTCTCTGCAAATTAAAAAA+CGG + Chr4:24451845-24451864 MsG0480019670.01.T01:intron 25.0%
! ATAAAGCTTCACAACAAATA+GGG - Chr4:24457798-24457817 None:intergenic 25.0%
! ATAATTTATTCGATGTCCAT+TGG + Chr4:24455723-24455742 MsG0480019670.01.T01:intron 25.0%
! ATAGCAGAATTGAAAACTAT+AGG + Chr4:24452534-24452553 MsG0480019670.01.T01:intron 25.0%
! ATATAGCAAATGATAAGCTA+TGG + Chr4:24456270-24456289 MsG0480019670.01.T01:intron 25.0%
! ATATTACAGGGAAATTAATG+AGG + Chr4:24456887-24456906 MsG0480019670.01.T01:intron 25.0%
! ATGTGAACTTCTTGATATAT+GGG + Chr4:24456570-24456589 MsG0480019670.01.T01:intron 25.0%
! ATGTTGAAATTCAATATGAG+GGG + Chr4:24455758-24455777 MsG0480019670.01.T01:intron 25.0%
! ATTTATGGAGTGACTTTATT+CGG + Chr4:24452087-24452106 MsG0480019670.01.T01:intron 25.0%
! CAAAAAAATCATCCAAAAGA+AGG - Chr4:24458867-24458886 None:intergenic 25.0%
! CATATGGACTTTATATTACA+GGG + Chr4:24456875-24456894 MsG0480019670.01.T01:intron 25.0%
! CATGTTGAAATTCAATATGA+GGG + Chr4:24455757-24455776 MsG0480019670.01.T01:intron 25.0%
! CCTGAAAAAAAATGAATACA+AGG - Chr4:24454733-24454752 None:intergenic 25.0%
! CTGAAAAATAAGTATGACTT+TGG - Chr4:24457625-24457644 None:intergenic 25.0%
! CTGATACAATCAATTCTTAT+GGG + Chr4:24458542-24458561 MsG0480019670.01.T01:intron 25.0%
! GAACTTAAAAATTGTATTGG+AGG + Chr4:24453733-24453752 MsG0480019670.01.T01:intron 25.0%
! GAATGTATAGACAAAGAAAT+TGG - Chr4:24458832-24458851 None:intergenic 25.0%
! GCAAACTTTATACAAATATC+AGG + Chr4:24457436-24457455 MsG0480019670.01.T01:CDS 25.0%
! TATTTCCGACACTATTATTA+TGG + Chr4:24453372-24453391 MsG0480019670.01.T01:intron 25.0%
! TCAAAATAAAATTTAGGTCG+AGG - Chr4:24454987-24455006 None:intergenic 25.0%
! TCATATTGAATTTCAACATG+AGG - Chr4:24455757-24455776 None:intergenic 25.0%
! TCATGTTGAAATTCAATATG+AGG + Chr4:24455756-24455775 MsG0480019670.01.T01:intron 25.0%
! TCTGATACAATCAATTCTTA+TGG + Chr4:24458541-24458560 MsG0480019670.01.T01:intron 25.0%
! TGAAAATGATAGATTCTGAA+GGG + Chr4:24454660-24454679 MsG0480019670.01.T01:intron 25.0%
! TGTATTTGGAAAGAATTCTT+CGG + Chr4:24457222-24457241 MsG0480019670.01.T01:CDS 25.0%
! TGTCTAATGAAAGAATATGA+AGG + Chr4:24459043-24459062 MsG0480019670.01.T01:three_prime_UTR 25.0%
! TTAAAAATTGTATTGGAGGA+GGG + Chr4:24453737-24453756 MsG0480019670.01.T01:intron 25.0%
! TTGAAAATGATAGATTCTGA+AGG + Chr4:24454659-24454678 MsG0480019670.01.T01:intron 25.0%
! TTGTTAAAAGAATGCATGTT+CGG + Chr4:24452737-24452756 MsG0480019670.01.T01:intron 25.0%
! TTTGGTTATTAGAGAGAAAT+TGG + Chr4:24454052-24454071 MsG0480019670.01.T01:CDS 25.0%
!! AAAAGTATATAGTTATGTCG+TGG - Chr4:24458407-24458426 None:intergenic 25.0%
!! AGTATTGAATTTGAAGTACA+AGG + Chr4:24454635-24454654 MsG0480019670.01.T01:CDS 25.0%
!! ATTTTGAATTTGCAAGGATT+AGG + Chr4:24451980-24451999 MsG0480019670.01.T01:intron 25.0%
!! CAACAAATTTTGAATTTGCA+AGG + Chr4:24451974-24451993 MsG0480019670.01.T01:intron 25.0%
!! CATTAATAAAGCATCATTCT+TGG + Chr4:24454593-24454612 MsG0480019670.01.T01:CDS 25.0%
!! CCTGAAAGTATAATAATTGT+GGG - Chr4:24458007-24458026 None:intergenic 25.0%
!! GAAAACCATCATTAAGTTTT+AGG - Chr4:24458714-24458733 None:intergenic 25.0%
!! GTGTTGTATCTTCATATTTT+TGG + Chr4:24457303-24457322 MsG0480019670.01.T01:intron 25.0%
!! TATACAAAAGGGGATTTTTA+TGG + Chr4:24455835-24455854 MsG0480019670.01.T01:intron 25.0%
!!! AAAACTTTAAAATTGTGCAG+TGG + Chr4:24458448-24458467 MsG0480019670.01.T01:intron 25.0%
!!! AACATGTTATGTTGTTTTTG+TGG + Chr4:24456541-24456560 MsG0480019670.01.T01:intron 25.0%
!!! ACATGTTATGTTGTTTTTGT+GGG + Chr4:24456542-24456561 MsG0480019670.01.T01:intron 25.0%
!!! ACTGCACAATTTTAAAGTTT+TGG - Chr4:24458449-24458468 None:intergenic 25.0%
!!! ATCAGTTTATTGTTTCTGAA+CGG + Chr4:24457475-24457494 MsG0480019670.01.T01:intron 25.0%
!!! ATTCCCTTATTTGTTTTTGA+GGG + Chr4:24457716-24457735 MsG0480019670.01.T01:intron 25.0%
!!! CCTTGTATTCATTTTTTTTC+AGG + Chr4:24454730-24454749 MsG0480019670.01.T01:intron 25.0%
!!! CTAGGTTTTTTTTACAAACT+TGG - Chr4:24456423-24456442 None:intergenic 25.0%
!!! CTTAGTTCTTATGAATTTTG+TGG + Chr4:24451429-24451448 MsG0480019670.01.T01:intron 25.0%
!!! GATGGTGTATTTTTATAATC+TGG + Chr4:24456624-24456643 MsG0480019670.01.T01:intron 25.0%
!!! GCTTTTTGAAAAATCTGAAA+TGG + Chr4:24456247-24456266 MsG0480019670.01.T01:intron 25.0%
!!! GTTGCTTATTTTCGAAATTT+AGG + Chr4:24451477-24451496 MsG0480019670.01.T01:intron 25.0%
!!! TATTCCCTATTTGTTTTTGA+GGG + Chr4:24457741-24457760 MsG0480019670.01.T01:intron 25.0%
!!! TATTCCCTTATTTGTTTTTG+AGG + Chr4:24457715-24457734 MsG0480019670.01.T01:intron 25.0%
!!! TGTATTTTTATAATCTGGTC+TGG + Chr4:24456629-24456648 MsG0480019670.01.T01:intron 25.0%
!!! TGTTGTTTTGTTATAGGTTT+TGG + Chr4:24454034-24454053 MsG0480019670.01.T01:intron 25.0%
!!! TGTTTTAAGATAATTCTGCA+GGG - Chr4:24455157-24455176 None:intergenic 25.0%
!!! TTTGTTGTTCTTAGTCTATA+AGG - Chr4:24451961-24451980 None:intergenic 25.0%
AAATAAAAAGGGAGAGACAA+GGG - Chr4:24455246-24455265 None:intergenic 30.0%
AAGGATAAACAGGTAAGATA+AGG - Chr4:24454714-24454733 None:intergenic 30.0%
AAGGTTCAAAATTACTACAG+AGG - Chr4:24456492-24456511 None:intergenic 30.0%
AATCAAATCTTTCAAGCTGT+AGG - Chr4:24457968-24457987 None:intergenic 30.0%
AATTGAGAAAAGGCAAATAG+GGG + Chr4:24454826-24454845 MsG0480019670.01.T01:CDS 30.0%
AATTGCTTGTTTATACCTTG+AGG + Chr4:24454303-24454322 MsG0480019670.01.T01:CDS 30.0%
ACTCCCTCAAAAACAAATAA+GGG - Chr4:24457722-24457741 None:intergenic 30.0%
AGATATGTCATAATATCGCA+AGG - Chr4:24454804-24454823 None:intergenic 30.0%
AGCATCAAGAATGATTTATG+AGG + Chr4:24458037-24458056 MsG0480019670.01.T01:CDS 30.0%
AGCCAGCATATTATTTGTAT+AGG - Chr4:24452889-24452908 None:intergenic 30.0%
AGGTTCAAAATTACTACAGA+GGG - Chr4:24456491-24456510 None:intergenic 30.0%
ATAAGAAAATCATTGTCAGC+AGG - Chr4:24457928-24457947 None:intergenic 30.0%
ATACTCCCTCAAAAACAAAT+AGG - Chr4:24457724-24457743 None:intergenic 30.0%
ATTTATGAGGATAGGATGAA+GGG + Chr4:24458050-24458069 MsG0480019670.01.T01:CDS 30.0%
CAAACTTTAATAACCTGATG+TGG - Chr4:24457284-24457303 None:intergenic 30.0%
CAAATTGAGAAAAGGCAAAT+AGG + Chr4:24454824-24454843 MsG0480019670.01.T01:CDS 30.0%
CAAGAATGATTTATGAGGAT+AGG + Chr4:24458042-24458061 MsG0480019670.01.T01:CDS 30.0%
CACAATCTATGTTTCAAATG+TGG + Chr4:24455951-24455970 MsG0480019670.01.T01:intron 30.0%
CCAAATACACCTGATATATA+AGG - Chr4:24457211-24457230 None:intergenic 30.0%
CCCACAATTATTATACTTTC+AGG + Chr4:24458004-24458023 MsG0480019670.01.T01:intron 30.0%
CCTTATATATCAGGTGTATT+TGG + Chr4:24457208-24457227 MsG0480019670.01.T01:intron 30.0%
CGATGAACTTCAGAATTAAA+CGG - Chr4:24458973-24458992 None:intergenic 30.0%
CGGAAATACTATGTATTCAA+AGG - Chr4:24453360-24453379 None:intergenic 30.0%
CTCCTATACAAATAATATGC+TGG + Chr4:24452884-24452903 MsG0480019670.01.T01:intron 30.0%
CTGTATAAATTGTAGAAAGG+TGG + Chr4:24453407-24453426 MsG0480019670.01.T01:intron 30.0%
CTTAAAAATTGTATTGGAGG+AGG + Chr4:24453736-24453755 MsG0480019670.01.T01:intron 30.0%
CTTGCAATTATAACGATGTT+TGG + Chr4:24451818-24451837 MsG0480019670.01.T01:intron 30.0%
GAACAGAAAGCAATAAGTTA+AGG - Chr4:24453049-24453068 None:intergenic 30.0%
GACATGAAATTATGTACCTT+GGG - Chr4:24457603-24457622 None:intergenic 30.0%
GATGTGAACTTCTTGATATA+TGG + Chr4:24456569-24456588 MsG0480019670.01.T01:intron 30.0%
GATTGTGAATCACAATATGT+AGG - Chr4:24455938-24455957 None:intergenic 30.0%
GCAGAATTATCTTAAAACAC+AGG + Chr4:24455158-24455177 MsG0480019670.01.T01:intron 30.0%
GGACTGTATAAATTGTAGAA+AGG + Chr4:24453404-24453423 MsG0480019670.01.T01:intron 30.0%
GGGGAACTTAAAAATTGTAT+TGG + Chr4:24453730-24453749 MsG0480019670.01.T01:intron 30.0%
GTAATAACTAGAAAAAGGGA+TGG - Chr4:24455600-24455619 None:intergenic 30.0%
GTGATTCAATTTAGACATTG+TGG - Chr4:24454406-24454425 None:intergenic 30.0%
GTGTTGAATTCCAAAATGAT+AGG + Chr4:24455882-24455901 MsG0480019670.01.T01:intron 30.0%
TACTCCCTCAAAAACAAATA+AGG - Chr4:24457723-24457742 None:intergenic 30.0%
TACTCCCTCAAAAACAAATA+GGG - Chr4:24457723-24457742 None:intergenic 30.0%
TCAAATTCAATACTTCATGC+TGG - Chr4:24454629-24454648 None:intergenic 30.0%
TGGAAGAAATAGAGGAAAAT+GGG + Chr4:24453651-24453670 MsG0480019670.01.T01:intron 30.0%
TGTTGAAATTCAATATGAGG+GGG + Chr4:24455759-24455778 MsG0480019670.01.T01:intron 30.0%
TTATTTAACCCACTTAAGAG+TGG - Chr4:24458295-24458314 None:intergenic 30.0%
TTGTCTTCTTAAAAACAGCA+AGG - Chr4:24455067-24455086 None:intergenic 30.0%
TTGTTACATGTCAAGCATTA+GGG + Chr4:24453496-24453515 MsG0480019670.01.T01:intron 30.0%
TTTACAAACTTGGTCATTCT+GGG - Chr4:24456413-24456432 None:intergenic 30.0%
TTTAGGCAAACAGGTAAATA+TGG - Chr4:24454173-24454192 None:intergenic 30.0%
TTTAGGTCGAGGAATTATAT+TGG - Chr4:24454976-24454995 None:intergenic 30.0%
TTTGTTACATGTCAAGCATT+AGG + Chr4:24453495-24453514 MsG0480019670.01.T01:intron 30.0%
! AATGGTGATGAAAACTTAAG+AGG - Chr4:24454885-24454904 None:intergenic 30.0%
! ATAATAGTCTCATGCTACTT+TGG + Chr4:24455632-24455651 MsG0480019670.01.T01:intron 30.0%
! ATGCATAGAATCGCAATTTT+AGG + Chr4:24456147-24456166 MsG0480019670.01.T01:intron 30.0%
! ATGGTGATGAAAACTTAAGA+GGG - Chr4:24454884-24454903 None:intergenic 30.0%
! CATAATAGACTTTAGAGATG+CGG - Chr4:24453251-24453270 None:intergenic 30.0%
! CATTAGCTTAATTGTAGTAG+CGG - Chr4:24453009-24453028 None:intergenic 30.0%
! CGGGATCCAATAAATTTTAA+TGG - Chr4:24455802-24455821 None:intergenic 30.0%
! GAGTACTTTTATGAACTAAG+AGG - Chr4:24458115-24458134 None:intergenic 30.0%
! GCCTGAAAGTATAATAATTG+TGG - Chr4:24458008-24458027 None:intergenic 30.0%
! GGATTTGTATCCTATCATTT+TGG - Chr4:24455895-24455914 None:intergenic 30.0%
! TCTTGTCGCATTAATTTTTG+TGG + Chr4:24457051-24457070 MsG0480019670.01.T01:intron 30.0%
! TTCTCTTTTTACTCAACCTA+GGG + Chr4:24451691-24451710 MsG0480019670.01.T01:intron 30.0%
! TTTTACAAACTTGGTCATTC+TGG - Chr4:24456414-24456433 None:intergenic 30.0%
!! AAATGATGTTTTGGATAGCA+TGG + Chr4:24458765-24458784 MsG0480019670.01.T01:CDS 30.0%
!! AATGATGTTTTGGATAGCAT+GGG + Chr4:24458766-24458785 MsG0480019670.01.T01:CDS 30.0%
!! ACAGAGTAGAAGTTCTAAAA+TGG - Chr4:24454903-24454922 None:intergenic 30.0%
!! GCTTTCTGTTCAGTTATTTT+TGG + Chr4:24453058-24453077 MsG0480019670.01.T01:intron 30.0%
!! TAAAAATACTGGTTTGGACT+CGG - Chr4:24455704-24455723 None:intergenic 30.0%
!! TTAATTTTTGTGGACTTGGT+TGG + Chr4:24457061-24457080 MsG0480019670.01.T01:intron 30.0%
!!! AAGTTTTAGGAGATTGAAGA+TGG - Chr4:24458701-24458720 None:intergenic 30.0%
!!! ATATATCTGTTTTTTCCCTG+TGG + Chr4:24454929-24454948 MsG0480019670.01.T01:intron 30.0%
!!! ATATTTTTGGTTGCCATGAT+GGG + Chr4:24457316-24457335 MsG0480019670.01.T01:intron 30.0%
!!! ATTTTGGAATTCAACACAAG+AGG - Chr4:24455879-24455898 None:intergenic 30.0%
!!! CACAATTTTAAAGTTTTGGC+TGG - Chr4:24458445-24458464 None:intergenic 30.0%
!!! CATTTTAGTTATTTTGGCCA+GGG - Chr4:24455577-24455596 None:intergenic 30.0%
!!! GGATGGCATTTTAGTTATTT+TGG - Chr4:24455583-24455602 None:intergenic 30.0%
!!! GTATTCCCTATTTGTTTTTG+AGG + Chr4:24457740-24457759 MsG0480019670.01.T01:intron 30.0%
!!! GTCACTTGTTGTTTTGTTAT+AGG + Chr4:24454028-24454047 MsG0480019670.01.T01:intron 30.0%
!!! GTGTTTTAAGATAATTCTGC+AGG - Chr4:24455158-24455177 None:intergenic 30.0%
!!! TCAAGCTCTAAATGATGTTT+TGG + Chr4:24458756-24458775 MsG0480019670.01.T01:CDS 30.0%
AAATCTTTCAAGCTGTAGGA+CGG - Chr4:24457964-24457983 None:intergenic 35.0%
AAGAAATAGAGGAAAATGGG+AGG + Chr4:24453654-24453673 MsG0480019670.01.T01:intron 35.0%
AAGATTTGTGCATCTGTTGA+AGG + Chr4:24456104-24456123 MsG0480019670.01.T01:intron 35.0%
AATACTAAACCCTCCTCATT+TGG + Chr4:24453708-24453727 MsG0480019670.01.T01:intron 35.0%
AATCTTTACCTTGTACAGTG+TGG - Chr4:24456994-24457013 None:intergenic 35.0%
ACGAAGAGAGTGAAATTTGA+CGG - Chr4:24451388-24451407 None:intergenic 35.0%
ACTGTTCTATCTTCTGTCTT+TGG - Chr4:24451594-24451613 None:intergenic 35.0%
AGAAATAGAGGAAAATGGGA+GGG + Chr4:24453655-24453674 MsG0480019670.01.T01:intron 35.0%
AGAAGAATTGAAACCACATC+AGG + Chr4:24457268-24457287 MsG0480019670.01.T01:CDS 35.0%
AGGTGGTGAAAAATAAGAAG+AGG + Chr4:24451232-24451251 MsG0480019670.01.T01:five_prime_UTR 35.0%
AGTAGCATAAAATGTGAGTG+AGG + Chr4:24455989-24456008 MsG0480019670.01.T01:intron 35.0%
AGTGAAATTGTCTGGAAGAA+GGG - Chr4:24457373-24457392 None:intergenic 35.0%
ATACTAAACCCTCCTCATTT+GGG + Chr4:24453709-24453728 MsG0480019670.01.T01:intron 35.0%
ATCACATTATATGACCAGTG+TGG - Chr4:24457187-24457206 None:intergenic 35.0%
ATCCAAAAGAAGGATGATTC+AGG - Chr4:24458857-24458876 None:intergenic 35.0%
ATGAAATTATGTACCTTGGG+AGG - Chr4:24457600-24457619 None:intergenic 35.0%
ATGAACCTTTGCCTTCAATT+GGG + Chr4:24456041-24456060 MsG0480019670.01.T01:intron 35.0%
ATGTTGTTGTGAAACAGTGA+TGG + Chr4:24451534-24451553 MsG0480019670.01.T01:intron 35.0%
CAAATAAAAAGGGAGAGACA+AGG - Chr4:24455247-24455266 None:intergenic 35.0%
CAAATGACATTCTTCAAGCT+AGG + Chr4:24451644-24451663 MsG0480019670.01.T01:CDS 35.0%
CACTACTAAAGGAACATCAT+CGG - Chr4:24452202-24452221 None:intergenic 35.0%
CATGTCACGTACAAAATCAT+TGG + Chr4:24454487-24454506 MsG0480019670.01.T01:intron 35.0%
CCAGAAATGATGAATTGTGA+TGG + Chr4:24456606-24456625 MsG0480019670.01.T01:intron 35.0%
CCATCACAATTCATCATTTC+TGG - Chr4:24456609-24456628 None:intergenic 35.0%
CTAAATCCAGCTCAAATGAA+AGG + Chr4:24456453-24456472 MsG0480019670.01.T01:intron 35.0%
CTGCTAAGTGTAACTGATAT+TGG + Chr4:24455333-24455352 MsG0480019670.01.T01:intron 35.0%
CTGTCCGCAATGATATATAT+TGG + Chr4:24455397-24455416 MsG0480019670.01.T01:intron 35.0%
GAACCGACATCAATCAAATA+TGG - Chr4:24454356-24454375 None:intergenic 35.0%
GAATCAGTGTTACCGAATAT+CGG + Chr4:24455361-24455380 MsG0480019670.01.T01:intron 35.0%
GATTATGCTCAATCATAGCT+CGG - Chr4:24457404-24457423 None:intergenic 35.0%
GATTCTAGCAGTTTATCCAA+TGG + Chr4:24458936-24458955 MsG0480019670.01.T01:three_prime_UTR 35.0%
GATTTATGAGGATAGGATGA+AGG + Chr4:24458049-24458068 MsG0480019670.01.T01:CDS 35.0%
GCAAGTTATATCTCCCAATA+TGG - Chr4:24454384-24454403 None:intergenic 35.0%
GGACATGAAATTATGTACCT+TGG - Chr4:24457604-24457623 None:intergenic 35.0%
GGTGGTGAAAAATAAGAAGA+GGG + Chr4:24451233-24451252 MsG0480019670.01.T01:five_prime_UTR 35.0%
GGTTCAAAATTACTACAGAG+GGG - Chr4:24456490-24456509 None:intergenic 35.0%
GTAGCATAAAATGTGAGTGA+GGG + Chr4:24455990-24456009 MsG0480019670.01.T01:intron 35.0%
GTAGCATGAGACTATTATAG+TGG - Chr4:24455630-24455649 None:intergenic 35.0%
GTGGAAAATATGAGGGAAAA+TGG - Chr4:24453910-24453929 None:intergenic 35.0%
GTGGAAGAAATAGAGGAAAA+TGG + Chr4:24453650-24453669 MsG0480019670.01.T01:intron 35.0%
GTTCAAAATTACTACAGAGG+GGG - Chr4:24456489-24456508 None:intergenic 35.0%
TAAACCTGACATCAGCTTAT+TGG + Chr4:24452005-24452024 MsG0480019670.01.T01:intron 35.0%
TAATCAAGGTTGTCAAACTC+AGG - Chr4:24456828-24456847 None:intergenic 35.0%
TACCTTTACCCACCATATAA+CGG + Chr4:24453307-24453326 MsG0480019670.01.T01:intron 35.0%
TATGAACTAAGAGGCTGTAA+TGG - Chr4:24458106-24458125 None:intergenic 35.0%
TATTCGATGTCCATTGGATT+TGG + Chr4:24455729-24455748 MsG0480019670.01.T01:intron 35.0%
TCAATATGAGGGGGTTATTA+TGG + Chr4:24455768-24455787 MsG0480019670.01.T01:intron 35.0%
TCGGCCAATATATATCATTG+CGG - Chr4:24455404-24455423 None:intergenic 35.0%
TGCCAATATTGTACACGTAA+CGG - Chr4:24456940-24456959 None:intergenic 35.0%
TGCTAACCAATAACCCATAT+CGG - Chr4:24452765-24452784 None:intergenic 35.0%
TTAGAAGTCGATGTACACAT+TGG - Chr4:24456523-24456542 None:intergenic 35.0%
TTAGCAGATAGGTACAAGTT+GGG - Chr4:24456352-24456371 None:intergenic 35.0%
TTTATGAATCTGAGGAGCAA+TGG + Chr4:24454081-24454100 MsG0480019670.01.T01:CDS 35.0%
! ATGATTTGTGCATCTGTTGA+AGG + Chr4:24456209-24456228 MsG0480019670.01.T01:intron 35.0%
! CGCATTAATTTTTGTGGACT+TGG + Chr4:24457057-24457076 MsG0480019670.01.T01:intron 35.0%
! GGATTTAGCTTAGTAGAACT+AGG - Chr4:24456441-24456460 None:intergenic 35.0%
! GGGTAATTGATGATAAGTTC+AGG + Chr4:24454263-24454282 MsG0480019670.01.T01:intron 35.0%
! GTTCTCTTTTTACTCAACCT+AGG + Chr4:24451690-24451709 MsG0480019670.01.T01:intron 35.0%
! TTCCTGAATCATCCTTCTTT+TGG + Chr4:24458852-24458871 MsG0480019670.01.T01:three_prime_UTR 35.0%
! TTTGATCATGAGTGTTGTGT+TGG + Chr4:24458667-24458686 MsG0480019670.01.T01:intron 35.0%
!! AAATTAATGAGGAAGCGCTT+GGG + Chr4:24456898-24456917 MsG0480019670.01.T01:CDS 35.0%
!! AGTTGTGTCTTTTGAAGAAC+AGG + Chr4:24452323-24452342 MsG0480019670.01.T01:CDS 35.0%
!! CGCATCTCTAAAGTCTATTA+TGG + Chr4:24453249-24453268 MsG0480019670.01.T01:intron 35.0%
!! TCTGCAAAAGCATCAATTTC+AGG - Chr4:24457251-24457270 None:intergenic 35.0%
!! TCTTGTAGCTTTGATGAGTT+AGG + Chr4:24457555-24457574 MsG0480019670.01.T01:intron 35.0%
!! TTTAGATTCTAGAACTGAGC+TGG + Chr4:24455019-24455038 MsG0480019670.01.T01:intron 35.0%
!!! CATATTTTTGGTTGCCATGA+TGG + Chr4:24457315-24457334 MsG0480019670.01.T01:intron 35.0%
!!! GCATTTTAGTTATTTTGGCC+AGG - Chr4:24455578-24455597 None:intergenic 35.0%
!!! TTTTTAAGTTCCCCCAAATG+AGG - Chr4:24453724-24453743 None:intergenic 35.0%
!!! TTTTTCAGGTTTGCTATGCT+AGG + Chr4:24454744-24454763 MsG0480019670.01.T01:intron 35.0%
AAAGAGGAAAAGGAAAGGTG+GGG - Chr4:24457145-24457164 None:intergenic 40.0%
AAATTATGTACCTTGGGAGG+TGG - Chr4:24457597-24457616 None:intergenic 40.0%
AATCCAAGTCAAACAGGAAC+AGG - Chr4:24458805-24458824 None:intergenic 40.0%
AATTATGTACCTTGGGAGGT+GGG - Chr4:24457596-24457615 None:intergenic 40.0%
ACAAAGAGGAAAAGGAAAGG+TGG - Chr4:24457147-24457166 None:intergenic 40.0%
ACACTGAAGAGTTGCAAAGA+TGG + Chr4:24458223-24458242 MsG0480019670.01.T01:CDS 40.0%
ACATGAGGATCCAAATCCAA+TGG - Chr4:24455742-24455761 None:intergenic 40.0%
ACTAAACATGAACGTTCCTG+AGG + Chr4:24457894-24457913 MsG0480019670.01.T01:intron 40.0%
ACTCATCAAAGCTACAAGAG+AGG - Chr4:24457554-24457573 None:intergenic 40.0%
AGAGAAACCTTCTGCAGTAT+GGG - Chr4:24457122-24457141 None:intergenic 40.0%
AGAGGGAAAAAGTAACATGC+AGG - Chr4:24454867-24454886 None:intergenic 40.0%
AGATCTGAAGAGGAAGTTCT+TGG + Chr4:24454772-24454791 MsG0480019670.01.T01:CDS 40.0%
AGATGCACAAATCATGTCTC+TGG - Chr4:24456204-24456223 None:intergenic 40.0%
AGCGATTCTATTTCACGCAA+CGG + Chr4:24451285-24451304 MsG0480019670.01.T01:five_prime_UTR 40.0%
AGTGGAGCTTTCAGAGATAT+TGG - Chr4:24458277-24458296 None:intergenic 40.0%
AGTTTACCTAACGGAGTTGA+AGG - Chr4:24451362-24451381 None:intergenic 40.0%
ATTCCTGTTCCTGTTTGACT+TGG + Chr4:24458799-24458818 MsG0480019670.01.T01:exon 40.0%
ATTTGCCTTATATACTGCCC+TGG + Chr4:24455557-24455576 MsG0480019670.01.T01:intron 40.0%
CAAAGAGGAAAAGGAAAGGT+GGG - Chr4:24457146-24457165 None:intergenic 40.0%
CAACTTGTACCTATCTGCTA+AGG + Chr4:24456351-24456370 MsG0480019670.01.T01:intron 40.0%
CACTGAAGAGTTGCAAAGAT+GGG + Chr4:24458224-24458243 MsG0480019670.01.T01:CDS 40.0%
CAGACAAAGAGGAAAAGGAA+AGG - Chr4:24457150-24457169 None:intergenic 40.0%
CAGTGAAATTGTCTGGAAGA+AGG - Chr4:24457374-24457393 None:intergenic 40.0%
CCACACGAGGTAAAACATAA+TGG - Chr4:24459014-24459033 None:intergenic 40.0%
CTAAATTGAATCACGCATGC+TGG + Chr4:24454412-24454431 MsG0480019670.01.T01:intron 40.0%
CTAGGATCTTAGATCTGAAG+AGG + Chr4:24454762-24454781 MsG0480019670.01.T01:CDS 40.0%
CTGACACTTAGAACAGTTAG+TGG - Chr4:24452713-24452732 None:intergenic 40.0%
CTGTGGTTGTGAGTAACATA+TGG + Chr4:24456859-24456878 MsG0480019670.01.T01:intron 40.0%
CTTAGCAGATAGGTACAAGT+TGG - Chr4:24456353-24456372 None:intergenic 40.0%
GAAATAGAGGAAAATGGGAG+GGG + Chr4:24453656-24453675 MsG0480019670.01.T01:intron 40.0%
GAGATTCCTTTCATTTGAGC+TGG - Chr4:24456462-24456481 None:intergenic 40.0%
GATGAACCTTTGCCTTCAAT+TGG + Chr4:24456040-24456059 MsG0480019670.01.T01:intron 40.0%
GATGAAGGGATCTATTGATC+AGG + Chr4:24458064-24458083 MsG0480019670.01.T01:CDS 40.0%
GATGGATAAACCTGCAACAT+CGG - Chr4:24455423-24455442 None:intergenic 40.0%
GGAAAAAAGGAATGAGCAAG+TGG + Chr4:24453631-24453650 MsG0480019670.01.T01:intron 40.0%
GGCAAACAGGTAAATATGGT+TGG - Chr4:24454169-24454188 None:intergenic 40.0%
GGCAATAATCCAAGTCAAAC+AGG - Chr4:24458811-24458830 None:intergenic 40.0%
GTACACATTGGCAAATCACA+AGG - Chr4:24456511-24456530 None:intergenic 40.0%
GTTACGTGTACAATATTGGC+AGG + Chr4:24456939-24456958 MsG0480019670.01.T01:CDS 40.0%
GTTTACCTAACGGAGTTGAA+GGG - Chr4:24451361-24451380 None:intergenic 40.0%
TAAGAGACTATTGCACCACA+GGG - Chr4:24454947-24454966 None:intergenic 40.0%
TACTAAACCCTCCTCATTTG+GGG + Chr4:24453710-24453729 MsG0480019670.01.T01:intron 40.0%
TATATATTGGCCGATGTTGC+AGG + Chr4:24455410-24455429 MsG0480019670.01.T01:intron 40.0%
TCAACACAAGAGGCTTATGT+TGG - Chr4:24455869-24455888 None:intergenic 40.0%
TCTTCAAAAGACACAACTCG+AGG - Chr4:24452321-24452340 None:intergenic 40.0%
TGAAAGCTCCACTCTTAAGT+GGG + Chr4:24458284-24458303 MsG0480019670.01.T01:intron 40.0%
TGACGGTGAAGTTTACCTAA+CGG - Chr4:24451371-24451390 None:intergenic 40.0%
TGAGCAAGTGGAAGAAATAG+AGG + Chr4:24453643-24453662 MsG0480019670.01.T01:intron 40.0%
TGCAGGTTTATCCATCATGA+CGG + Chr4:24455427-24455446 MsG0480019670.01.T01:intron 40.0%
TGCCGTTACGTGTACAATAT+TGG + Chr4:24456935-24456954 MsG0480019670.01.T01:CDS 40.0%
TTGAAGGCAGCATATGTTCA+GGG + Chr4:24456225-24456244 MsG0480019670.01.T01:intron 40.0%
TTGACCTAGATTCAGGAATG+AGG + Chr4:24454132-24454151 MsG0480019670.01.T01:CDS 40.0%
TTGAGGGGTGGAAAATATGA+GGG - Chr4:24453917-24453936 None:intergenic 40.0%
TTGTTGTGAAACAGTGATGG+AGG + Chr4:24451537-24451556 MsG0480019670.01.T01:intron 40.0%
TTTGAGGGGTGGAAAATATG+AGG - Chr4:24453918-24453937 None:intergenic 40.0%
! ACAGAGTTTTGCTGAAGAGT+TGG + Chr4:24452236-24452255 MsG0480019670.01.T01:CDS 40.0%
! ATTCTGCGACCCTTGTTTAT+GGG + Chr4:24458616-24458635 MsG0480019670.01.T01:intron 40.0%
! ATTGTATTGGAGGAGGGTTT+TGG + Chr4:24453743-24453762 MsG0480019670.01.T01:intron 40.0%
! CAGAGTTTTGCTGAAGAGTT+GGG + Chr4:24452237-24452256 MsG0480019670.01.T01:CDS 40.0%
! CCATTATGTTTTACCTCGTG+TGG + Chr4:24459011-24459030 MsG0480019670.01.T01:three_prime_UTR 40.0%
! GGTTTTCTCTTGCAGATTGT+TGG + Chr4:24458727-24458746 MsG0480019670.01.T01:intron 40.0%
! GTCGGTTCTTAGACCATATT+GGG + Chr4:24454368-24454387 MsG0480019670.01.T01:intron 40.0%
! GTTATTGGTTAGCATGCACA+TGG + Chr4:24452771-24452790 MsG0480019670.01.T01:intron 40.0%
! TATTCTGCGACCCTTGTTTA+TGG + Chr4:24458615-24458634 MsG0480019670.01.T01:intron 40.0%
! TGTTGTGAAACAGTGATGGA+GGG + Chr4:24451538-24451557 MsG0480019670.01.T01:intron 40.0%
! TTGTATTGGAGGAGGGTTTT+GGG + Chr4:24453744-24453763 MsG0480019670.01.T01:intron 40.0%
! TTTGTGGACTTGGTTGGATT+AGG + Chr4:24457067-24457086 MsG0480019670.01.T01:intron 40.0%
!! AAGCGGATTATGTAATGGGT+TGG + Chr4:24455457-24455476 MsG0480019670.01.T01:intron 40.0%
!! AGCGGATTATGTAATGGGTT+GGG + Chr4:24455458-24455477 MsG0480019670.01.T01:intron 40.0%
!! AGTGGTATTGACCTAGATTC+AGG + Chr4:24454125-24454144 MsG0480019670.01.T01:CDS 40.0%
!! CACGAAGCGGATTATGTAAT+GGG + Chr4:24455453-24455472 MsG0480019670.01.T01:intron 40.0%
!! GAAATTAATGAGGAAGCGCT+TGG + Chr4:24456897-24456916 MsG0480019670.01.T01:CDS 40.0%
!! GAATGCTGCTTTCTTAAGCA+TGG + Chr4:24452421-24452440 MsG0480019670.01.T01:intron 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG + Chr4:24453586-24453605 MsG0480019670.01.T01:intron 40.0%
!! TACCGTTATATGGTGGGTAA+AGG - Chr4:24453312-24453331 None:intergenic 40.0%
!! TCACGAAGCGGATTATGTAA+TGG + Chr4:24455452-24455471 MsG0480019670.01.T01:intron 40.0%
!! TGGGATGTTAGCTTTCTATG+AGG - Chr4:24456333-24456352 None:intergenic 40.0%
!! TGTCGGTTCTTAGACCATAT+TGG + Chr4:24454367-24454386 MsG0480019670.01.T01:intron 40.0%
!! TTAGGCTTTGTTTGCGAGTT+TGG - Chr4:24453961-24453980 None:intergenic 40.0%
AAACATGAACGTTCCTGAGG+AGG + Chr4:24457897-24457916 MsG0480019670.01.T01:intron 45.0%
AACACGCTACCGTTATATGG+TGG - Chr4:24453319-24453338 None:intergenic 45.0%
AACATGAACGTTCCTGAGGA+GGG + Chr4:24457898-24457917 MsG0480019670.01.T01:intron 45.0%
AACGGTCAAAGTGCAACCAT+TGG - Chr4:24458955-24458974 None:intergenic 45.0%
AAGCTGAAGCATACCCATCA+TGG - Chr4:24457332-24457351 None:intergenic 45.0%
ACACGCTACCGTTATATGGT+GGG - Chr4:24453318-24453337 None:intergenic 45.0%
ACCAACACGCTACCGTTATA+TGG - Chr4:24453322-24453341 None:intergenic 45.0%
ACCATATAACGGTAGCGTGT+TGG + Chr4:24453318-24453337 MsG0480019670.01.T01:intron 45.0%
ACCTTTGCCTTCAATTGGGT+TGG + Chr4:24456045-24456064 MsG0480019670.01.T01:intron 45.0%
ACTAAACCCTCCTCATTTGG+GGG + Chr4:24453711-24453730 MsG0480019670.01.T01:intron 45.0%
ACTCTGATGAGACTCCTGTT+GGG + Chr4:24458131-24458150 MsG0480019670.01.T01:intron 45.0%
AGTCCCTGATGTCAGCTTAT+TGG + Chr4:24451876-24451895 MsG0480019670.01.T01:intron 45.0%
AGTGTTCTCGTTTGCGTTTG+TGG - Chr4:24451332-24451351 None:intergenic 45.0%
CAAAACCCTTCAACTCCGTT+AGG + Chr4:24451353-24451372 MsG0480019670.01.T01:five_prime_UTR 45.0%
CCAGTGTGGAAAGTCAAATG+AGG - Chr4:24457173-24457192 None:intergenic 45.0%
CCTTTGCCTTCAATTGGGTT+GGG + Chr4:24456046-24456065 MsG0480019670.01.T01:intron 45.0%
CTAAGAGACTATTGCACCAC+AGG - Chr4:24454948-24454967 None:intergenic 45.0%
CTGAAAGCTCCACTCTTAAG+TGG + Chr4:24458283-24458302 MsG0480019670.01.T01:intron 45.0%
CTGTGGTGCAATAGTCTCTT+AGG + Chr4:24454946-24454965 MsG0480019670.01.T01:intron 45.0%
CTTGTACCTATCTGCTAAGG+AGG + Chr4:24456354-24456373 MsG0480019670.01.T01:intron 45.0%
GAGACCTCATTCCTGAATCT+AGG - Chr4:24454139-24454158 None:intergenic 45.0%
GAGAGAAACCTTCTGCAGTA+TGG - Chr4:24457123-24457142 None:intergenic 45.0%
GAGAGGCAAACACACAGATT+AGG - Chr4:24457537-24457556 None:intergenic 45.0%
GATCTATCCCATACTGCAGA+AGG + Chr4:24457112-24457131 MsG0480019670.01.T01:CDS 45.0%
GATGAGTTAGGCACACTGTT+GGG + Chr4:24457567-24457586 MsG0480019670.01.T01:CDS 45.0%
GATGTGCAACACTGCTATAG+AGG - Chr4:24452928-24452947 None:intergenic 45.0%
GATTCTATTTCACGCAACGG+AGG + Chr4:24451288-24451307 MsG0480019670.01.T01:five_prime_UTR 45.0%
GCAATCTCTTTCTGTGTCTC+AGG - Chr4:24452273-24452292 None:intergenic 45.0%
GGGAAAAAGTAACATGCAGG+AGG - Chr4:24454864-24454883 None:intergenic 45.0%
GTACAATATTGGCAGGTGCA+GGG + Chr4:24456946-24456965 MsG0480019670.01.T01:CDS 45.0%
GTCAAATGAGGCAGACAAAG+AGG - Chr4:24457161-24457180 None:intergenic 45.0%
GTCAATACCACTGAGCATCT+GGG - Chr4:24454117-24454136 None:intergenic 45.0%
GTCCCTGATGTCAGCTTATT+GGG + Chr4:24451877-24451896 MsG0480019670.01.T01:intron 45.0%
GTTGAAGGCAGCATATGTTC+AGG + Chr4:24456224-24456243 MsG0480019670.01.T01:intron 45.0%
TAAGTTCCCCCAAATGAGGA+GGG - Chr4:24453720-24453739 None:intergenic 45.0%
TACTCTGATGAGACTCCTGT+TGG + Chr4:24458130-24458149 MsG0480019670.01.T01:intron 45.0%
TATGGCTGTGTCATAACGCA+TGG - Chr4:24452560-24452579 None:intergenic 45.0%
TCCAGACAATTTCACTGTGC+TGG + Chr4:24457377-24457396 MsG0480019670.01.T01:CDS 45.0%
TCCAGCACAGTGAAATTGTC+TGG - Chr4:24457381-24457400 None:intergenic 45.0%
TGAGGCAGACAAAGAGGAAA+AGG - Chr4:24457155-24457174 None:intergenic 45.0%
TGATGAGTTAGGCACACTGT+TGG + Chr4:24457566-24457585 MsG0480019670.01.T01:CDS 45.0%
TGTACAATATTGGCAGGTGC+AGG + Chr4:24456945-24456964 MsG0480019670.01.T01:CDS 45.0%
TGTACAGTGTGGCAAGAACA+CGG - Chr4:24456983-24457002 None:intergenic 45.0%
TGTTCACCTCCTTAGCAGAT+AGG - Chr4:24456363-24456382 None:intergenic 45.0%
TGTTCTTGCCACACTGTACA+AGG + Chr4:24456983-24457002 MsG0480019670.01.T01:CDS 45.0%
TTAAGTTCCCCCAAATGAGG+AGG - Chr4:24453721-24453740 None:intergenic 45.0%
TTACCGAATATCGGCCATGA+CGG + Chr4:24455370-24455389 MsG0480019670.01.T01:intron 45.0%
TTACTGGTAATCATGCCACG+TGG - Chr4:24452031-24452050 None:intergenic 45.0%
TTGGATAGCATGGGCAAGAA+GGG + Chr4:24458775-24458794 MsG0480019670.01.T01:CDS 45.0%
TTTGGATAGCATGGGCAAGA+AGG + Chr4:24458774-24458793 MsG0480019670.01.T01:CDS 45.0%
TTTGGCCAGGGCAGTATATA+AGG - Chr4:24455565-24455584 None:intergenic 45.0%
! ATGTAGGTATTGCCTCTCAG+TGG - Chr4:24455922-24455941 None:intergenic 45.0%
! CCTCATTTGACTTTCCACAC+TGG + Chr4:24457170-24457189 MsG0480019670.01.T01:intron 45.0%
! CTAACGGAGTTGAAGGGTTT+TGG - Chr4:24451355-24451374 None:intergenic 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG + Chr4:24453591-24453610 MsG0480019670.01.T01:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - Chr4:24453610-24453591 None:intergenic 45.0%
! GCTGCTTTCTTAAGCATGGT+AGG + Chr4:24452425-24452444 MsG0480019670.01.T01:intron 45.0%
! GGCTGAGCTTTATGAATCTG+AGG + Chr4:24454073-24454092 MsG0480019670.01.T01:CDS 45.0%
! GTTTTGCTGAAGAGTTGGGA+AGG + Chr4:24452241-24452260 MsG0480019670.01.T01:CDS 45.0%
! TCTGAAGTTCATCGCGATTG+TGG + Chr4:24458979-24458998 MsG0480019670.01.T01:three_prime_UTR 45.0%
! TGTATTGGAGGAGGGTTTTG+GGG + Chr4:24453745-24453764 MsG0480019670.01.T01:intron 45.0%
!! CTTCAATTGGGTTGGGCATT+GGG + Chr4:24456053-24456072 MsG0480019670.01.T01:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + Chr4:24453590-24453609 MsG0480019670.01.T01:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - Chr4:24453609-24453590 None:intergenic 45.0%
ACAAATCCCTGTCCACTGAG+AGG + Chr4:24455907-24455926 MsG0480019670.01.T01:intron 50.0%
ACATCAGCTTATTGGCCACG+TGG + Chr4:24452013-24452032 MsG0480019670.01.T01:intron 50.0%
AGAGTTTCACTTGTCCCCTG+AGG - Chr4:24452954-24452973 None:intergenic 50.0%
AGCTGACGCGACACTACTAA+AGG - Chr4:24452213-24452232 None:intergenic 50.0%
ATAGAGGAAAATGGGAGGGG+AGG + Chr4:24453659-24453678 MsG0480019670.01.T01:intron 50.0%
ATCACTTCCTAGTCCCCAAC+AGG - Chr4:24458148-24458167 None:intergenic 50.0%
ATGCATGTTCGGCTCCGATA+TGG + Chr4:24452748-24452767 MsG0480019670.01.T01:intron 50.0%
CATTGACAGCATCGTCATCC+TGG - Chr4:24454563-24454582 None:intergenic 50.0%
CCAATGCCCAACCCAATTGA+AGG - Chr4:24456055-24456074 None:intergenic 50.0%
CCCAACCCAATTGAAGGCAA+AGG - Chr4:24456049-24456068 None:intergenic 50.0%
CGCAATAAAGTCACGCCATG+TGG - Chr4:24451903-24451922 None:intergenic 50.0%
CTCTGATGAGACTCCTGTTG+GGG + Chr4:24458132-24458151 MsG0480019670.01.T01:intron 50.0%
CTTGGTCATTCTGGGCAATG+AGG - Chr4:24456405-24456424 None:intergenic 50.0%
GACAGTCATTTGTCCACACG+AGG - Chr4:24459027-24459046 None:intergenic 50.0%
GAGTTTCACTTGTCCCCTGA+GGG - Chr4:24452953-24452972 None:intergenic 50.0%
GGAGAGACAAGGGAAAAGCT+GGG - Chr4:24455236-24455255 None:intergenic 50.0%
GGCCCAATAAGCTGACATCA+GGG - Chr4:24451882-24451901 None:intergenic 50.0%
GGTCAATACCACTGAGCATC+TGG - Chr4:24454118-24454137 None:intergenic 50.0%
GTACAGTGTGGCAAGAACAC+GGG - Chr4:24456982-24457001 None:intergenic 50.0%
GTATTGCCTCTCAGTGGACA+GGG - Chr4:24455916-24455935 None:intergenic 50.0%
GTGGCCAATAAGCTGATGTC+AGG - Chr4:24452012-24452031 None:intergenic 50.0%
GTTGCAAAGATGGGACAAGC+AGG + Chr4:24458233-24458252 MsG0480019670.01.T01:CDS 50.0%
TACCCGTCATGGCCGATATT+CGG - Chr4:24455376-24455395 None:intergenic 50.0%
TACCGAATATCGGCCATGAC+GGG + Chr4:24455371-24455390 MsG0480019670.01.T01:intron 50.0%
TAGAGGAAAATGGGAGGGGA+GGG + Chr4:24453660-24453679 MsG0480019670.01.T01:intron 50.0%
TCTGGAAGAAGGGCTTTCTG+TGG - Chr4:24457363-24457382 None:intergenic 50.0%
TGATACAATCCTCGCGTGCA+CGG - Chr4:24458645-24458664 None:intergenic 50.0%
TGCATGTTCGGCTCCGATAT+GGG + Chr4:24452749-24452768 MsG0480019670.01.T01:intron 50.0%
TGCTGAAGAGTTGGGAAGGT+TGG + Chr4:24452245-24452264 MsG0480019670.01.T01:CDS 50.0%
TGGCCCAATAAGCTGACATC+AGG - Chr4:24451883-24451902 None:intergenic 50.0%
TGTCAGCTTATTGGGCCACA+TGG + Chr4:24451885-24451904 MsG0480019670.01.T01:intron 50.0%
TGTTGGGGACTAGGAAGTGA+TGG + Chr4:24458147-24458166 MsG0480019670.01.T01:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG + Chr4:24453596-24453615 MsG0480019670.01.T01:intron 50.0%
! AAAATGGGAGGGGAGGGTTT+TGG + Chr4:24453666-24453685 MsG0480019670.01.T01:intron 50.0%
! AAATGGGAGGGGAGGGTTTT+GGG + Chr4:24453667-24453686 MsG0480019670.01.T01:intron 50.0%
! TAACGGTAGCGTGTTGGTGT+CGG + Chr4:24453324-24453343 MsG0480019670.01.T01:intron 50.0%
! TCGGCTCCGATATGGGTTAT+TGG + Chr4:24452756-24452775 MsG0480019670.01.T01:intron 50.0%
!! ATCATGACGGTGTCACGAAG+CGG + Chr4:24455440-24455459 MsG0480019670.01.T01:intron 50.0%
!! ATGTAATGGGTTGGGCGAGA+GGG + Chr4:24455466-24455485 MsG0480019670.01.T01:intron 50.0%
!! CCTTCAATTGGGTTGGGCAT+TGG + Chr4:24456052-24456071 MsG0480019670.01.T01:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + Chr4:24453589-24453608 MsG0480019670.01.T01:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - Chr4:24453608-24453589 None:intergenic 50.0%
!! GTATTGGAGGAGGGTTTTGG+GGG + Chr4:24453746-24453765 MsG0480019670.01.T01:intron 50.0%
!! TATGTAATGGGTTGGGCGAG+AGG + Chr4:24455465-24455484 MsG0480019670.01.T01:intron 50.0%
!!! TATTGGAGGAGGGTTTTGGG+GGG + Chr4:24453747-24453766 MsG0480019670.01.T01:intron 50.0%
AAAGCTGCCCAGATGCTCAG+TGG + Chr4:24454107-24454126 MsG0480019670.01.T01:CDS 55.0%
AGTGTTGCACATCAGCCCTC+AGG + Chr4:24452935-24452954 MsG0480019670.01.T01:intron 55.0%
GACAAGGGAAAAGCTGGGAG+AGG - Chr4:24455231-24455250 None:intergenic 55.0%
GATACAATCCTCGCGTGCAC+GGG - Chr4:24458644-24458663 None:intergenic 55.0%
GCAAGAACACGGGAACGTTG+AGG - Chr4:24456972-24456991 None:intergenic 55.0%
GCACGGGTGCCCATAAACAA+GGG - Chr4:24458628-24458647 None:intergenic 55.0%
GCTTCGTGACACCGTCATGA+TGG - Chr4:24455441-24455460 None:intergenic 55.0%
GGGAGAGACAAGGGAAAAGC+TGG - Chr4:24455237-24455256 None:intergenic 55.0%
GGGGGAAGGCTTGGGAAAAA+AGG + Chr4:24453618-24453637 MsG0480019670.01.T01:intron 55.0%
GGTATTGCCTCTCAGTGGAC+AGG - Chr4:24455917-24455936 None:intergenic 55.0%
GTGTTGCACATCAGCCCTCA+GGG + Chr4:24452936-24452955 MsG0480019670.01.T01:intron 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG + Chr4:24453595-24453614 MsG0480019670.01.T01:intron 55.0%
GTTTGCGAGTTTGGAGGGGA+GGG - Chr4:24453614-24453595 None:intergenic 55.0%
TCAGCAGGATTTCCCTCCTC+AGG - Chr4:24457913-24457932 None:intergenic 55.0%
TGAGACTCCTGTTGGGGACT+AGG + Chr4:24458138-24458157 MsG0480019670.01.T01:intron 55.0%
TGCACGGGTGCCCATAAACA+AGG - Chr4:24458629-24458648 None:intergenic 55.0%
TGTTGCACATCAGCCCTCAG+GGG + Chr4:24452937-24452956 MsG0480019670.01.T01:intron 55.0%
TGTTTGCGAGTTTGGAGGGG+AGG - Chr4:24453613-24453594 None:intergenic 55.0%
TTGCGAGTTTGGAGGGGAAG+GGG + Chr4:24453597-24453616 MsG0480019670.01.T01:intron 55.0%
TTGCGGACAGATACCCGTCA+TGG - Chr4:24455387-24455406 None:intergenic 55.0%
TTTGCGAGTTTGGAGGGGAG+GGG - Chr4:24453951-24453970 None:intergenic 55.0%
! AATGGGAGGGGAGGGTTTTG+GGG + Chr4:24453668-24453687 MsG0480019670.01.T01:intron 55.0%
! AGGGGAAGGGAAGGCTTTGA+GGG - Chr4:24453933-24453952 None:intergenic 55.0%
!! AATTGGGTTGGGCATTGGGC+AGG + Chr4:24456057-24456076 MsG0480019670.01.T01:intron 55.0%
!!! AGGAGGGTTTTGGGGGGTTT+TGG + Chr4:24453753-24453772 MsG0480019670.01.T01:intron 55.0%
!!! AGGGTTTTGGGGGGTTTTGG+AGG + Chr4:24453756-24453775 MsG0480019670.01.T01:intron 55.0%
!!! GGGTTTTGGGGGGTTTTGGA+GGG + Chr4:24453757-24453776 MsG0480019670.01.T01:intron 55.0%
GAGGGGAAGGGAAGGCTTTG+AGG - Chr4:24453934-24453953 None:intergenic 60.0%
GAGTTTGGAGGGGAGGGGAA+GGG - Chr4:24453946-24453965 None:intergenic 60.0%
GTTGGGAATCCCACCTCCCA+AGG + Chr4:24457584-24457603 MsG0480019670.01.T01:CDS 60.0%
TGCGAGTTTGGAGGGGAAGG+GGG + Chr4:24453598-24453617 MsG0480019670.01.T01:intron 60.0%
!! ATGGGAGGGGAGGGTTTTGG+GGG + Chr4:24453669-24453688 MsG0480019670.01.T01:intron 60.0%
!! GAAGGGAAGGCTTTGAGGGG+TGG - Chr4:24453929-24453948 None:intergenic 60.0%
!! GGGGAAGGGAAGGCTTTGAG+GGG - Chr4:24453932-24453951 None:intergenic 60.0%
CGAGTTTGGAGGGGAAGGGG+GGG + Chr4:24453600-24453619 MsG0480019670.01.T01:intron 65.0%
CGAGTTTGGAGGGGAGGGGA+AGG - Chr4:24453947-24453966 None:intergenic 65.0%
GCGAGTTTGGAGGGGAAGGG+GGG + Chr4:24453599-24453618 MsG0480019670.01.T01:intron 65.0%
GGGCGAGAGGGATGAGGCTT+TGG + Chr4:24455478-24455497 MsG0480019670.01.T01:intron 65.0%
TTGGAGGGGAGGGGAAGGGA+AGG - Chr4:24453942-24453961 None:intergenic 65.0%
TTTGGAGGGGAAGGGGGGGA+AGG + Chr4:24453604-24453623 MsG0480019670.01.T01:intron 65.0%
! TGGGTTGGGCGAGAGGGATG+AGG + Chr4:24455472-24455491 MsG0480019670.01.T01:intron 65.0%
!!! TGGGAGGGGAGGGTTTTGGG+GGG + Chr4:24453670-24453689 MsG0480019670.01.T01:intron 65.0%
AGGGGAAGGGGGGGAAGGCT+TGG + Chr4:24453609-24453628 MsG0480019670.01.T01:intron 70.0%
GGGGAAGGGGGGGAAGGCTT+GGG + Chr4:24453610-24453629 MsG0480019670.01.T01:intron 70.0%
TATGGGCACCCGTGCACGCG+AGG + Chr4:24458633-24458652 MsG0480019670.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 24451226 24459095 24451226 ID=MsG0480019670.01;Name=MsG0480019670.01
Chr4 mRNA 24451226 24459095 24451226 ID=MsG0480019670.01.T01;Parent=MsG0480019670.01;Name=MsG0480019670.01.T01;_AED=0.47;_eAED=0.48;_QI=151|0.86|0.87|1|0.8|0.75|16|279|416
Chr4 exon 24451226 24451374 24451226 ID=MsG0480019670.01.T01:exon:5331;Parent=MsG0480019670.01.T01
Chr4 exon 24451551 24451682 24451551 ID=MsG0480019670.01.T01:exon:5332;Parent=MsG0480019670.01.T01
Chr4 exon 24451797 24451834 24451797 ID=MsG0480019670.01.T01:exon:5333;Parent=MsG0480019670.01.T01
Chr4 exon 24452174 24452344 24452174 ID=MsG0480019670.01.T01:exon:5334;Parent=MsG0480019670.01.T01
Chr4 exon 24454050 24454153 24454050 ID=MsG0480019670.01.T01:exon:5335;Parent=MsG0480019670.01.T01
Chr4 exon 24454264 24454324 24454264 ID=MsG0480019670.01.T01:exon:5336;Parent=MsG0480019670.01.T01
Chr4 exon 24454564 24454656 24454564 ID=MsG0480019670.01.T01:exon:5337;Parent=MsG0480019670.01.T01
Chr4 exon 24454752 24454852 24454752 ID=MsG0480019670.01.T01:exon:5338;Parent=MsG0480019670.01.T01
Chr4 exon 24456896 24457004 24456896 ID=MsG0480019670.01.T01:exon:5339;Parent=MsG0480019670.01.T01
Chr4 exon 24457089 24457133 24457089 ID=MsG0480019670.01.T01:exon:5340;Parent=MsG0480019670.01.T01
Chr4 exon 24457221 24457289 24457221 ID=MsG0480019670.01.T01:exon:5341;Parent=MsG0480019670.01.T01
Chr4 exon 24457366 24457457 24457366 ID=MsG0480019670.01.T01:exon:5342;Parent=MsG0480019670.01.T01
Chr4 exon 24457563 24457605 24457563 ID=MsG0480019670.01.T01:exon:5343;Parent=MsG0480019670.01.T01
Chr4 exon 24458026 24458085 24458026 ID=MsG0480019670.01.T01:exon:5344;Parent=MsG0480019670.01.T01
Chr4 exon 24458195 24458254 24458195 ID=MsG0480019670.01.T01:exon:5345;Parent=MsG0480019670.01.T01
Chr4 exon 24458742 24459095 24458742 ID=MsG0480019670.01.T01:exon:5346;Parent=MsG0480019670.01.T01
Chr4 five_prime_UTR 24451226 24451374 24451226 ID=MsG0480019670.01.T01:five_prime_utr;Parent=MsG0480019670.01.T01
Chr4 five_prime_UTR 24451551 24451552 24451551 ID=MsG0480019670.01.T01:five_prime_utr;Parent=MsG0480019670.01.T01
Chr4 CDS 24451553 24451682 24451553 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24451797 24451834 24451797 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24452174 24452344 24452174 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24454050 24454153 24454050 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24454264 24454324 24454264 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24454564 24454656 24454564 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24454752 24454852 24454752 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24456896 24457004 24456896 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24457089 24457133 24457089 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24457221 24457289 24457221 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24457366 24457457 24457366 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24457563 24457605 24457563 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24458026 24458085 24458026 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24458195 24458254 24458195 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 CDS 24458742 24458816 24458742 ID=MsG0480019670.01.T01:cds;Parent=MsG0480019670.01.T01
Chr4 three_prime_UTR 24458817 24459095 24458817 ID=MsG0480019670.01.T01:three_prime_utr;Parent=MsG0480019670.01.T01
Gene Sequence

>MsG0480019670.01.T01

ATGGAGGGTGCTTTTGCAAGCGCTTCAGCGATTACAGACCAAAGACAGAAGATAGAACAGTATAAGCAAATTCTTTCTGCTGTCATTTCATCAAATGACATTCTTCAAGCTAGGAAATTCATAGATCACAGGTTTAAACATGATTTTAGTTCTTGCAATTATAACGATTTTGAATTTTGTGTTTCAGTGTTATCCGATGATGTTCCTTTAGTAGTGTCGCGTCAGCTTCTACAGAGTTTTGCTGAAGAGTTGGGAAGGTTGGCACCTGAGACACAGAAAGAGATTGCTCATTACATACTTGCTCAGATTCAGCCTCGAGTTGTGTCTTTTGAAGAACAGGTTTTGGTTATTAGAGAGAAATTGGCTGAGCTTTATGAATCTGAGGAGCAATGGTCAAAAGCTGCCCAGATGCTCAGTGGTATTGACCTAGATTCAGGAATGAGGGTAATTGATGATAAGTTCAGGTTATCAAAGTGTGTTCAAATTGCTTGTTTATACCTTGAGGATGACGATGCTGTCAATGCTGAAGCTTTCATTAATAAAGCATCATTCTTGGTTAGCAATAGCCAGCATGAAGTATTGAATTTGAAGTACAAGGTTTGCTATGCTAGGATCTTAGATCTGAAGAGGAAGTTCTTGGAAGCTGCCTTGCGATATTATGACATATCTCAAATTGAGAAAAGGCAAATAGGGGATGAGGAAATTAATGAGGAAGCGCTTGGGCAAGCTTTATCTGCTGCCGTTACGTGTACAATATTGGCAGGTGCAGGGCCTCAACGTTCCCGTGTTCTTGCCACACTGTACAAGGATGAGCGTTGTTCAAAGTTGAAGATCTATCCCATACTGCAGAAGGTGTATTTGGAAAGAATTCTTCGGAAGCCTGAAATTGATGCTTTTGCAGAAGAATTGAAACCACATCAGAAAGCCCTTCTTCCAGACAATTTCACTGTGCTGGACCGAGCTATGATTGAGCATAATCTTCTGAGTGCAAGCAAACTTTATACAAATATCAGCTTTGATGAGTTAGGCACACTGTTGGGAATCCCACCTCCCAAGGCTGAGAAGATAGCATCAAGAATGATTTATGAGGATAGGATGAAGGGATCTATTGATCAGGTTGAAGCTATCATACATTTTGATGATGACACTGAAGAGTTGCAAAGATGGGACAAGCAGATTGTTGGTCTATGTCAAGCTCTAAATGATGTTTTGGATAGCATGGGCAAGAAGGGCATTCCTGTTCCTGTTTGA
Protein sequence

>MsG0480019670.01.T01

MEGAFASASAITDQRQKIEQYKQILSAVISSNDILQARKFIDHRFKHDFSSCNYNDFEFCVSVLSDDVPLVVSRQLLQSFAEELGRLAPETQKEIAHYILAQIQPRVVSFEEQVLVIREKLAELYESEEQWSKAAQMLSGIDLDSGMRVIDDKFRLSKCVQIACLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLKYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEINEEALGQALSAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPPKAEKIASRMIYEDRMKGSIDQVEAIIHFDDDTEELQRWDKQIVGLCQALNDVLDSMGKKGIPVPV*