AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013754.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013754.01.T01 MTR_3g452710 100.000 253 0 0 2 254 297 549 0.0 530
MsG0380013754.01.T01 MTR_3g452710 100.000 253 0 0 2 254 230 482 0.0 527
MsG0380013754.01.T01 MTR_2g100130 85.433 254 36 1 2 254 148 401 2.21e-162 456
MsG0380013754.01.T01 MTR_2g100160 87.747 253 30 1 2 253 167 419 1.20e-161 454
MsG0380013754.01.T01 MTR_2g100130 85.433 254 36 1 2 254 218 471 2.13e-161 456
MsG0380013754.01.T01 MTR_2g100130 85.433 254 36 1 2 254 247 500 2.92e-161 456
MsG0380013754.01.T01 MTR_2g100130 85.433 254 36 1 2 254 257 510 5.00e-161 456
MsG0380013754.01.T01 MTR_2g100130 85.106 235 34 1 2 235 257 491 7.29e-147 421
MsG0380013754.01.T01 MTR_2g100130 85.106 235 33 2 2 235 218 451 2.14e-145 415
MsG0380013754.01.T01 MTR_2g100130 85.106 235 33 2 2 235 257 490 3.17e-145 416
MsG0380013754.01.T01 MTR_2g100130 84.360 211 32 1 2 211 257 467 4.94e-130 377
MsG0380013754.01.T01 MTR_1g074880 47.248 218 112 3 2 218 9 224 5.87e-66 206
MsG0380013754.01.T01 MTR_1g074880 47.248 218 112 3 2 218 9 224 6.32e-66 206
MsG0380013754.01.T01 MTR_7g116380 47.059 221 114 3 2 221 64 282 1.44e-65 207
MsG0380013754.01.T01 MTR_7g116380 47.059 221 114 3 2 221 64 282 1.69e-65 206
MsG0380013754.01.T01 MTR_1g074880 47.248 218 112 3 2 218 64 279 2.83e-65 206
MsG0380013754.01.T01 MTR_1g074880 47.248 218 112 3 2 218 64 279 3.46e-65 206
MsG0380013754.01.T01 MTR_1g079950 46.330 218 114 3 2 218 38 253 1.86e-64 204
MsG0380013754.01.T01 MTR_1g079950 45.701 221 117 3 2 221 64 282 3.78e-64 203
MsG0380013754.01.T01 MTR_1g079950 46.330 218 114 3 2 218 64 279 4.37e-64 203
MsG0380013754.01.T01 MTR_1g079950 46.330 218 114 3 2 218 64 279 5.02e-64 203
MsG0380013754.01.T01 MTR_1g079950 46.330 218 114 3 2 218 93 308 8.52e-64 203
MsG0380013754.01.T01 MTR_5g081230 47.248 218 112 3 2 218 81 296 1.73e-63 201
MsG0380013754.01.T01 MTR_7g112870 46.789 218 113 3 2 218 66 281 2.05e-63 201
MsG0380013754.01.T01 MTR_8g005010 44.495 218 118 3 2 218 62 277 1.30e-62 198
MsG0380013754.01.T01 MTR_8g098980 45.701 221 117 3 2 221 65 283 1.71e-61 196
MsG0380013754.01.T01 MTR_1g043240 44.954 218 117 3 2 218 64 279 6.55e-61 195
MsG0380013754.01.T01 MTR_8g062430 41.350 237 133 5 2 236 58 290 7.21e-55 179
MsG0380013754.01.T01 MTR_5g037200 40.756 238 135 5 2 237 58 291 1.60e-54 178
MsG0380013754.01.T01 MTR_5g093990 42.017 238 133 5 2 237 55 289 2.27e-54 177
MsG0380013754.01.T01 MTR_8g085610 41.150 226 128 4 2 226 36 257 3.18e-54 176
MsG0380013754.01.T01 MTR_8g085610 41.150 226 128 4 2 226 60 281 7.38e-54 176
MsG0380013754.01.T01 MTR_7g107310 40.271 221 129 3 2 221 65 283 1.43e-53 176
MsG0380013754.01.T01 MTR_1g039380 44.344 221 119 4 2 220 30 248 4.15e-53 173
MsG0380013754.01.T01 MTR_1g039380 44.344 221 119 4 2 220 54 272 1.29e-52 173
MsG0380013754.01.T01 MTR_8g072600 37.919 298 128 10 2 242 140 437 8.08e-50 170
MsG0380013754.01.T01 MTR_2g087530 38.723 235 121 8 2 218 589 818 4.75e-40 147
MsG0380013754.01.T01 MTR_2g087530 38.723 235 121 8 2 218 702 931 6.65e-40 147
MsG0380013754.01.T01 MTR_4g050540 38.723 235 121 8 2 218 707 936 5.85e-39 144
MsG0380013754.01.T01 MTR_1g089370 37.768 233 124 6 2 217 586 814 6.79e-39 144
MsG0380013754.01.T01 MTR_2g099710 33.333 288 121 12 2 242 249 512 1.09e-35 134
MsG0380013754.01.T01 MTR_8g072600 38.049 205 93 5 2 172 140 344 1.24e-33 125
MsG0380013754.01.T01 MTR_5g037200 40.458 131 73 4 2 130 58 185 7.67e-23 93.2
MsG0380013754.01.T02 MTR_3g452710 100.000 253 0 0 2 254 297 549 0.0 530
MsG0380013754.01.T02 MTR_3g452710 100.000 253 0 0 2 254 230 482 0.0 527
MsG0380013754.01.T02 MTR_2g100130 85.433 254 36 1 2 254 148 401 2.21e-162 456
MsG0380013754.01.T02 MTR_2g100160 87.747 253 30 1 2 253 167 419 1.20e-161 454
MsG0380013754.01.T02 MTR_2g100130 85.433 254 36 1 2 254 218 471 2.13e-161 456
MsG0380013754.01.T02 MTR_2g100130 85.433 254 36 1 2 254 247 500 2.92e-161 456
MsG0380013754.01.T02 MTR_2g100130 85.433 254 36 1 2 254 257 510 5.00e-161 456
MsG0380013754.01.T02 MTR_2g100130 85.106 235 34 1 2 235 257 491 7.29e-147 421
MsG0380013754.01.T02 MTR_2g100130 85.106 235 33 2 2 235 218 451 2.14e-145 415
MsG0380013754.01.T02 MTR_2g100130 85.106 235 33 2 2 235 257 490 3.17e-145 416
MsG0380013754.01.T02 MTR_2g100130 84.360 211 32 1 2 211 257 467 4.94e-130 377
MsG0380013754.01.T02 MTR_1g074880 47.248 218 112 3 2 218 9 224 5.87e-66 206
MsG0380013754.01.T02 MTR_1g074880 47.248 218 112 3 2 218 9 224 6.32e-66 206
MsG0380013754.01.T02 MTR_7g116380 47.059 221 114 3 2 221 64 282 1.44e-65 207
MsG0380013754.01.T02 MTR_7g116380 47.059 221 114 3 2 221 64 282 1.69e-65 206
MsG0380013754.01.T02 MTR_1g074880 47.248 218 112 3 2 218 64 279 2.83e-65 206
MsG0380013754.01.T02 MTR_1g074880 47.248 218 112 3 2 218 64 279 3.46e-65 206
MsG0380013754.01.T02 MTR_1g079950 46.330 218 114 3 2 218 38 253 1.86e-64 204
MsG0380013754.01.T02 MTR_1g079950 45.701 221 117 3 2 221 64 282 3.78e-64 203
MsG0380013754.01.T02 MTR_1g079950 46.330 218 114 3 2 218 64 279 4.37e-64 203
MsG0380013754.01.T02 MTR_1g079950 46.330 218 114 3 2 218 64 279 5.02e-64 203
MsG0380013754.01.T02 MTR_1g079950 46.330 218 114 3 2 218 93 308 8.52e-64 203
MsG0380013754.01.T02 MTR_5g081230 47.248 218 112 3 2 218 81 296 1.73e-63 201
MsG0380013754.01.T02 MTR_7g112870 46.789 218 113 3 2 218 66 281 2.05e-63 201
MsG0380013754.01.T02 MTR_8g005010 44.495 218 118 3 2 218 62 277 1.30e-62 198
MsG0380013754.01.T02 MTR_8g098980 45.701 221 117 3 2 221 65 283 1.71e-61 196
MsG0380013754.01.T02 MTR_1g043240 44.954 218 117 3 2 218 64 279 6.55e-61 195
MsG0380013754.01.T02 MTR_8g062430 41.350 237 133 5 2 236 58 290 7.21e-55 179
MsG0380013754.01.T02 MTR_5g037200 40.756 238 135 5 2 237 58 291 1.60e-54 178
MsG0380013754.01.T02 MTR_5g093990 42.017 238 133 5 2 237 55 289 2.27e-54 177
MsG0380013754.01.T02 MTR_8g085610 41.150 226 128 4 2 226 36 257 3.18e-54 176
MsG0380013754.01.T02 MTR_8g085610 41.150 226 128 4 2 226 60 281 7.38e-54 176
MsG0380013754.01.T02 MTR_7g107310 40.271 221 129 3 2 221 65 283 1.43e-53 176
MsG0380013754.01.T02 MTR_1g039380 44.344 221 119 4 2 220 30 248 4.15e-53 173
MsG0380013754.01.T02 MTR_1g039380 44.344 221 119 4 2 220 54 272 1.29e-52 173
MsG0380013754.01.T02 MTR_8g072600 37.919 298 128 10 2 242 140 437 8.08e-50 170
MsG0380013754.01.T02 MTR_2g087530 38.723 235 121 8 2 218 589 818 4.75e-40 147
MsG0380013754.01.T02 MTR_2g087530 38.723 235 121 8 2 218 702 931 6.65e-40 147
MsG0380013754.01.T02 MTR_4g050540 38.723 235 121 8 2 218 707 936 5.85e-39 144
MsG0380013754.01.T02 MTR_1g089370 37.768 233 124 6 2 217 586 814 6.79e-39 144
MsG0380013754.01.T02 MTR_2g099710 33.333 288 121 12 2 242 249 512 1.09e-35 134
MsG0380013754.01.T02 MTR_8g072600 38.049 205 93 5 2 172 140 344 1.24e-33 125
MsG0380013754.01.T02 MTR_5g037200 40.458 131 73 4 2 130 58 185 7.67e-23 93.2
MsG0380013754.01.T03 MTR_3g452710 100.000 253 0 0 2 254 297 549 0.0 530
MsG0380013754.01.T03 MTR_3g452710 100.000 253 0 0 2 254 230 482 0.0 527
MsG0380013754.01.T03 MTR_2g100130 85.433 254 36 1 2 254 148 401 2.21e-162 456
MsG0380013754.01.T03 MTR_2g100160 87.747 253 30 1 2 253 167 419 1.20e-161 454
MsG0380013754.01.T03 MTR_2g100130 85.433 254 36 1 2 254 218 471 2.13e-161 456
MsG0380013754.01.T03 MTR_2g100130 85.433 254 36 1 2 254 247 500 2.92e-161 456
MsG0380013754.01.T03 MTR_2g100130 85.433 254 36 1 2 254 257 510 5.00e-161 456
MsG0380013754.01.T03 MTR_2g100130 85.106 235 34 1 2 235 257 491 7.29e-147 421
MsG0380013754.01.T03 MTR_2g100130 85.106 235 33 2 2 235 218 451 2.14e-145 415
MsG0380013754.01.T03 MTR_2g100130 85.106 235 33 2 2 235 257 490 3.17e-145 416
MsG0380013754.01.T03 MTR_2g100130 84.360 211 32 1 2 211 257 467 4.94e-130 377
MsG0380013754.01.T03 MTR_1g074880 47.248 218 112 3 2 218 9 224 5.87e-66 206
MsG0380013754.01.T03 MTR_1g074880 47.248 218 112 3 2 218 9 224 6.32e-66 206
MsG0380013754.01.T03 MTR_7g116380 47.059 221 114 3 2 221 64 282 1.44e-65 207
MsG0380013754.01.T03 MTR_7g116380 47.059 221 114 3 2 221 64 282 1.69e-65 206
MsG0380013754.01.T03 MTR_1g074880 47.248 218 112 3 2 218 64 279 2.83e-65 206
MsG0380013754.01.T03 MTR_1g074880 47.248 218 112 3 2 218 64 279 3.46e-65 206
MsG0380013754.01.T03 MTR_1g079950 46.330 218 114 3 2 218 38 253 1.86e-64 204
MsG0380013754.01.T03 MTR_1g079950 45.701 221 117 3 2 221 64 282 3.78e-64 203
MsG0380013754.01.T03 MTR_1g079950 46.330 218 114 3 2 218 64 279 4.37e-64 203
MsG0380013754.01.T03 MTR_1g079950 46.330 218 114 3 2 218 64 279 5.02e-64 203
MsG0380013754.01.T03 MTR_1g079950 46.330 218 114 3 2 218 93 308 8.52e-64 203
MsG0380013754.01.T03 MTR_5g081230 47.248 218 112 3 2 218 81 296 1.73e-63 201
MsG0380013754.01.T03 MTR_7g112870 46.789 218 113 3 2 218 66 281 2.05e-63 201
MsG0380013754.01.T03 MTR_8g005010 44.495 218 118 3 2 218 62 277 1.30e-62 198
MsG0380013754.01.T03 MTR_8g098980 45.701 221 117 3 2 221 65 283 1.71e-61 196
MsG0380013754.01.T03 MTR_1g043240 44.954 218 117 3 2 218 64 279 6.55e-61 195
MsG0380013754.01.T03 MTR_8g062430 41.350 237 133 5 2 236 58 290 7.21e-55 179
MsG0380013754.01.T03 MTR_5g037200 40.756 238 135 5 2 237 58 291 1.60e-54 178
MsG0380013754.01.T03 MTR_5g093990 42.017 238 133 5 2 237 55 289 2.27e-54 177
MsG0380013754.01.T03 MTR_8g085610 41.150 226 128 4 2 226 36 257 3.18e-54 176
MsG0380013754.01.T03 MTR_8g085610 41.150 226 128 4 2 226 60 281 7.38e-54 176
MsG0380013754.01.T03 MTR_7g107310 40.271 221 129 3 2 221 65 283 1.43e-53 176
MsG0380013754.01.T03 MTR_1g039380 44.344 221 119 4 2 220 30 248 4.15e-53 173
MsG0380013754.01.T03 MTR_1g039380 44.344 221 119 4 2 220 54 272 1.29e-52 173
MsG0380013754.01.T03 MTR_8g072600 37.919 298 128 10 2 242 140 437 8.08e-50 170
MsG0380013754.01.T03 MTR_2g087530 38.723 235 121 8 2 218 589 818 4.75e-40 147
MsG0380013754.01.T03 MTR_2g087530 38.723 235 121 8 2 218 702 931 6.65e-40 147
MsG0380013754.01.T03 MTR_4g050540 38.723 235 121 8 2 218 707 936 5.85e-39 144
MsG0380013754.01.T03 MTR_1g089370 37.768 233 124 6 2 217 586 814 6.79e-39 144
MsG0380013754.01.T03 MTR_2g099710 33.333 288 121 12 2 242 249 512 1.09e-35 134
MsG0380013754.01.T03 MTR_8g072600 38.049 205 93 5 2 172 140 344 1.24e-33 125
MsG0380013754.01.T03 MTR_5g037200 40.458 131 73 4 2 130 58 185 7.67e-23 93.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013754.01.T01 AT2G42810 92.490 253 19 0 2 254 232 484 6.80e-178 498
MsG0380013754.01.T01 AT2G42810 92.490 253 19 0 2 254 232 484 6.80e-178 498
MsG0380013754.01.T01 AT2G42810 92.490 253 19 0 2 254 232 484 6.80e-178 498
MsG0380013754.01.T01 AT2G42810 92.490 253 19 0 2 254 285 537 2.09e-177 499
MsG0380013754.01.T01 AT2G42810 92.490 253 19 0 2 254 286 538 2.46e-177 499
MsG0380013754.01.T01 AT5G27840 47.706 218 111 3 2 218 70 285 2.37e-64 204
MsG0380013754.01.T01 AT5G27840 47.706 218 111 3 2 218 70 285 2.37e-64 204
MsG0380013754.01.T01 AT5G27840 47.706 218 111 3 2 218 70 285 2.94e-64 204
MsG0380013754.01.T01 AT5G27840 47.059 221 114 3 2 221 70 288 3.02e-64 203
MsG0380013754.01.T01 AT3G46820 46.330 218 114 3 2 218 74 289 1.05e-63 202
MsG0380013754.01.T01 AT2G29400 45.455 220 118 2 2 221 81 298 1.28e-63 202
MsG0380013754.01.T01 AT5G43380 46.330 218 114 3 2 218 64 279 2.11e-63 201
MsG0380013754.01.T01 AT5G43380 46.330 218 114 3 2 218 64 279 2.51e-63 201
MsG0380013754.01.T01 AT5G43380 46.330 218 114 3 2 218 64 279 3.20e-63 201
MsG0380013754.01.T01 AT3G05580 46.606 221 115 3 2 221 70 288 1.09e-62 199
MsG0380013754.01.T01 AT5G59160 42.562 242 132 4 2 242 74 309 1.92e-62 198
MsG0380013754.01.T01 AT5G59160 42.562 242 132 4 2 242 74 309 1.92e-62 198
MsG0380013754.01.T01 AT5G59160 42.562 242 132 4 2 242 74 309 1.92e-62 198
MsG0380013754.01.T01 AT2G39840 46.606 221 115 3 2 221 78 296 4.12e-62 198
MsG0380013754.01.T01 AT1G64040 44.796 221 119 3 2 221 65 283 1.23e-60 194
MsG0380013754.01.T01 AT4G11240 44.037 218 119 3 2 218 65 280 1.99e-59 191
MsG0380013754.01.T01 AT2G42500 41.176 221 127 3 2 221 65 283 3.53e-56 182
MsG0380013754.01.T01 AT4G26720 40.816 245 140 5 2 244 55 296 5.02e-56 182
MsG0380013754.01.T01 AT1G10430 41.176 238 134 5 2 237 58 291 4.60e-55 179
MsG0380013754.01.T01 AT1G10430 41.176 238 134 5 2 237 58 291 4.60e-55 179
MsG0380013754.01.T01 AT5G55260 40.816 245 140 5 2 244 55 296 4.83e-55 179
MsG0380013754.01.T01 AT1G59830 41.176 238 134 5 2 237 58 291 9.37e-55 179
MsG0380013754.01.T01 AT3G58500 40.271 221 129 3 2 221 65 283 3.99e-54 177
MsG0380013754.01.T01 AT1G69960 40.928 237 134 5 2 236 59 291 1.05e-53 176
MsG0380013754.01.T01 AT1G50370 44.344 221 119 4 2 220 54 272 7.21e-53 174
MsG0380013754.01.T01 AT2G42500 39.367 221 132 2 2 221 17 236 7.79e-53 172
MsG0380013754.01.T01 AT3G05580 48.108 185 93 3 2 185 70 252 1.78e-52 171
MsG0380013754.01.T01 AT5G63870 37.584 298 129 11 2 242 88 385 6.62e-52 174
MsG0380013754.01.T01 AT5G63870 37.584 298 129 11 2 242 88 385 6.62e-52 174
MsG0380013754.01.T01 AT3G19980 43.439 221 121 4 2 220 54 272 2.62e-51 169
MsG0380013754.01.T01 AT5G55260 35.315 286 139 7 2 244 55 337 5.82e-48 162
MsG0380013754.01.T01 AT1G59830 43.455 191 103 4 2 190 58 245 2.72e-45 153
MsG0380013754.01.T01 AT1G03445 39.689 257 134 8 2 244 514 763 3.01e-45 162
MsG0380013754.01.T01 AT1G03445 39.689 257 134 8 2 244 514 763 3.81e-45 161
MsG0380013754.01.T01 AT4G03080 38.462 234 123 7 2 218 588 817 1.99e-40 148
MsG0380013754.01.T01 AT2G27210 37.607 234 125 7 2 218 708 937 2.14e-37 140
MsG0380013754.01.T01 AT2G27210 37.607 234 125 7 2 218 713 942 2.21e-37 139
MsG0380013754.01.T01 AT1G08420 37.607 234 125 7 2 218 724 953 6.86e-37 138
MsG0380013754.01.T01 AT1G08420 37.607 234 125 7 2 218 719 948 7.13e-37 138
MsG0380013754.01.T01 AT5G63870 36.321 212 101 6 2 179 88 299 5.83e-35 127
MsG0380013754.01.T01 AT1G48120 33.217 286 127 7 2 224 664 948 9.55e-35 132
MsG0380013754.01.T01 AT5G10900 33.591 259 135 6 2 224 234 491 2.07e-32 125
MsG0380013754.01.T01 AT5G10900 33.591 259 135 6 2 224 234 491 2.13e-32 125
MsG0380013754.01.T01 AT5G10900 33.591 259 135 6 2 224 234 491 2.41e-32 124
MsG0380013754.01.T01 AT2G42500 37.864 103 61 2 2 101 65 167 3.20e-15 72.0
MsG0380013754.01.T01 AT2G42500 39.394 99 57 2 2 97 65 163 4.63e-15 71.2
MsG0380013754.01.T01 AT2G42500 39.394 99 57 2 2 97 65 163 6.09e-15 71.2
MsG0380013754.01.T02 AT2G42810 92.490 253 19 0 2 254 232 484 6.80e-178 498
MsG0380013754.01.T02 AT2G42810 92.490 253 19 0 2 254 232 484 6.80e-178 498
MsG0380013754.01.T02 AT2G42810 92.490 253 19 0 2 254 232 484 6.80e-178 498
MsG0380013754.01.T02 AT2G42810 92.490 253 19 0 2 254 285 537 2.09e-177 499
MsG0380013754.01.T02 AT2G42810 92.490 253 19 0 2 254 286 538 2.46e-177 499
MsG0380013754.01.T02 AT5G27840 47.706 218 111 3 2 218 70 285 2.37e-64 204
MsG0380013754.01.T02 AT5G27840 47.706 218 111 3 2 218 70 285 2.37e-64 204
MsG0380013754.01.T02 AT5G27840 47.706 218 111 3 2 218 70 285 2.94e-64 204
MsG0380013754.01.T02 AT5G27840 47.059 221 114 3 2 221 70 288 3.02e-64 203
MsG0380013754.01.T02 AT3G46820 46.330 218 114 3 2 218 74 289 1.05e-63 202
MsG0380013754.01.T02 AT2G29400 45.455 220 118 2 2 221 81 298 1.28e-63 202
MsG0380013754.01.T02 AT5G43380 46.330 218 114 3 2 218 64 279 2.11e-63 201
MsG0380013754.01.T02 AT5G43380 46.330 218 114 3 2 218 64 279 2.51e-63 201
MsG0380013754.01.T02 AT5G43380 46.330 218 114 3 2 218 64 279 3.20e-63 201
MsG0380013754.01.T02 AT3G05580 46.606 221 115 3 2 221 70 288 1.09e-62 199
MsG0380013754.01.T02 AT5G59160 42.562 242 132 4 2 242 74 309 1.92e-62 198
MsG0380013754.01.T02 AT5G59160 42.562 242 132 4 2 242 74 309 1.92e-62 198
MsG0380013754.01.T02 AT5G59160 42.562 242 132 4 2 242 74 309 1.92e-62 198
MsG0380013754.01.T02 AT2G39840 46.606 221 115 3 2 221 78 296 4.12e-62 198
MsG0380013754.01.T02 AT1G64040 44.796 221 119 3 2 221 65 283 1.23e-60 194
MsG0380013754.01.T02 AT4G11240 44.037 218 119 3 2 218 65 280 1.99e-59 191
MsG0380013754.01.T02 AT2G42500 41.176 221 127 3 2 221 65 283 3.53e-56 182
MsG0380013754.01.T02 AT4G26720 40.816 245 140 5 2 244 55 296 5.02e-56 182
MsG0380013754.01.T02 AT1G10430 41.176 238 134 5 2 237 58 291 4.60e-55 179
MsG0380013754.01.T02 AT1G10430 41.176 238 134 5 2 237 58 291 4.60e-55 179
MsG0380013754.01.T02 AT5G55260 40.816 245 140 5 2 244 55 296 4.83e-55 179
MsG0380013754.01.T02 AT1G59830 41.176 238 134 5 2 237 58 291 9.37e-55 179
MsG0380013754.01.T02 AT3G58500 40.271 221 129 3 2 221 65 283 3.99e-54 177
MsG0380013754.01.T02 AT1G69960 40.928 237 134 5 2 236 59 291 1.05e-53 176
MsG0380013754.01.T02 AT1G50370 44.344 221 119 4 2 220 54 272 7.21e-53 174
MsG0380013754.01.T02 AT2G42500 39.367 221 132 2 2 221 17 236 7.79e-53 172
MsG0380013754.01.T02 AT3G05580 48.108 185 93 3 2 185 70 252 1.78e-52 171
MsG0380013754.01.T02 AT5G63870 37.584 298 129 11 2 242 88 385 6.62e-52 174
MsG0380013754.01.T02 AT5G63870 37.584 298 129 11 2 242 88 385 6.62e-52 174
MsG0380013754.01.T02 AT3G19980 43.439 221 121 4 2 220 54 272 2.62e-51 169
MsG0380013754.01.T02 AT5G55260 35.315 286 139 7 2 244 55 337 5.82e-48 162
MsG0380013754.01.T02 AT1G59830 43.455 191 103 4 2 190 58 245 2.72e-45 153
MsG0380013754.01.T02 AT1G03445 39.689 257 134 8 2 244 514 763 3.01e-45 162
MsG0380013754.01.T02 AT1G03445 39.689 257 134 8 2 244 514 763 3.81e-45 161
MsG0380013754.01.T02 AT4G03080 38.462 234 123 7 2 218 588 817 1.99e-40 148
MsG0380013754.01.T02 AT2G27210 37.607 234 125 7 2 218 708 937 2.14e-37 140
MsG0380013754.01.T02 AT2G27210 37.607 234 125 7 2 218 713 942 2.21e-37 139
MsG0380013754.01.T02 AT1G08420 37.607 234 125 7 2 218 724 953 6.86e-37 138
MsG0380013754.01.T02 AT1G08420 37.607 234 125 7 2 218 719 948 7.13e-37 138
MsG0380013754.01.T02 AT5G63870 36.321 212 101 6 2 179 88 299 5.83e-35 127
MsG0380013754.01.T02 AT1G48120 33.217 286 127 7 2 224 664 948 9.55e-35 132
MsG0380013754.01.T02 AT5G10900 33.591 259 135 6 2 224 234 491 2.07e-32 125
MsG0380013754.01.T02 AT5G10900 33.591 259 135 6 2 224 234 491 2.13e-32 125
MsG0380013754.01.T02 AT5G10900 33.591 259 135 6 2 224 234 491 2.41e-32 124
MsG0380013754.01.T02 AT2G42500 37.864 103 61 2 2 101 65 167 3.20e-15 72.0
MsG0380013754.01.T02 AT2G42500 39.394 99 57 2 2 97 65 163 4.63e-15 71.2
MsG0380013754.01.T02 AT2G42500 39.394 99 57 2 2 97 65 163 6.09e-15 71.2
MsG0380013754.01.T03 AT2G42810 92.490 253 19 0 2 254 232 484 6.80e-178 498
MsG0380013754.01.T03 AT2G42810 92.490 253 19 0 2 254 232 484 6.80e-178 498
MsG0380013754.01.T03 AT2G42810 92.490 253 19 0 2 254 232 484 6.80e-178 498
MsG0380013754.01.T03 AT2G42810 92.490 253 19 0 2 254 285 537 2.09e-177 499
MsG0380013754.01.T03 AT2G42810 92.490 253 19 0 2 254 286 538 2.46e-177 499
MsG0380013754.01.T03 AT5G27840 47.706 218 111 3 2 218 70 285 2.37e-64 204
MsG0380013754.01.T03 AT5G27840 47.706 218 111 3 2 218 70 285 2.37e-64 204
MsG0380013754.01.T03 AT5G27840 47.706 218 111 3 2 218 70 285 2.94e-64 204
MsG0380013754.01.T03 AT5G27840 47.059 221 114 3 2 221 70 288 3.02e-64 203
MsG0380013754.01.T03 AT3G46820 46.330 218 114 3 2 218 74 289 1.05e-63 202
MsG0380013754.01.T03 AT2G29400 45.455 220 118 2 2 221 81 298 1.28e-63 202
MsG0380013754.01.T03 AT5G43380 46.330 218 114 3 2 218 64 279 2.11e-63 201
MsG0380013754.01.T03 AT5G43380 46.330 218 114 3 2 218 64 279 2.51e-63 201
MsG0380013754.01.T03 AT5G43380 46.330 218 114 3 2 218 64 279 3.20e-63 201
MsG0380013754.01.T03 AT3G05580 46.606 221 115 3 2 221 70 288 1.09e-62 199
MsG0380013754.01.T03 AT5G59160 42.562 242 132 4 2 242 74 309 1.92e-62 198
MsG0380013754.01.T03 AT5G59160 42.562 242 132 4 2 242 74 309 1.92e-62 198
MsG0380013754.01.T03 AT5G59160 42.562 242 132 4 2 242 74 309 1.92e-62 198
MsG0380013754.01.T03 AT2G39840 46.606 221 115 3 2 221 78 296 4.12e-62 198
MsG0380013754.01.T03 AT1G64040 44.796 221 119 3 2 221 65 283 1.23e-60 194
MsG0380013754.01.T03 AT4G11240 44.037 218 119 3 2 218 65 280 1.99e-59 191
MsG0380013754.01.T03 AT2G42500 41.176 221 127 3 2 221 65 283 3.53e-56 182
MsG0380013754.01.T03 AT4G26720 40.816 245 140 5 2 244 55 296 5.02e-56 182
MsG0380013754.01.T03 AT1G10430 41.176 238 134 5 2 237 58 291 4.60e-55 179
MsG0380013754.01.T03 AT1G10430 41.176 238 134 5 2 237 58 291 4.60e-55 179
MsG0380013754.01.T03 AT5G55260 40.816 245 140 5 2 244 55 296 4.83e-55 179
MsG0380013754.01.T03 AT1G59830 41.176 238 134 5 2 237 58 291 9.37e-55 179
MsG0380013754.01.T03 AT3G58500 40.271 221 129 3 2 221 65 283 3.99e-54 177
MsG0380013754.01.T03 AT1G69960 40.928 237 134 5 2 236 59 291 1.05e-53 176
MsG0380013754.01.T03 AT1G50370 44.344 221 119 4 2 220 54 272 7.21e-53 174
MsG0380013754.01.T03 AT2G42500 39.367 221 132 2 2 221 17 236 7.79e-53 172
MsG0380013754.01.T03 AT3G05580 48.108 185 93 3 2 185 70 252 1.78e-52 171
MsG0380013754.01.T03 AT5G63870 37.584 298 129 11 2 242 88 385 6.62e-52 174
MsG0380013754.01.T03 AT5G63870 37.584 298 129 11 2 242 88 385 6.62e-52 174
MsG0380013754.01.T03 AT3G19980 43.439 221 121 4 2 220 54 272 2.62e-51 169
MsG0380013754.01.T03 AT5G55260 35.315 286 139 7 2 244 55 337 5.82e-48 162
MsG0380013754.01.T03 AT1G59830 43.455 191 103 4 2 190 58 245 2.72e-45 153
MsG0380013754.01.T03 AT1G03445 39.689 257 134 8 2 244 514 763 3.01e-45 162
MsG0380013754.01.T03 AT1G03445 39.689 257 134 8 2 244 514 763 3.81e-45 161
MsG0380013754.01.T03 AT4G03080 38.462 234 123 7 2 218 588 817 1.99e-40 148
MsG0380013754.01.T03 AT2G27210 37.607 234 125 7 2 218 708 937 2.14e-37 140
MsG0380013754.01.T03 AT2G27210 37.607 234 125 7 2 218 713 942 2.21e-37 139
MsG0380013754.01.T03 AT1G08420 37.607 234 125 7 2 218 724 953 6.86e-37 138
MsG0380013754.01.T03 AT1G08420 37.607 234 125 7 2 218 719 948 7.13e-37 138
MsG0380013754.01.T03 AT5G63870 36.321 212 101 6 2 179 88 299 5.83e-35 127
MsG0380013754.01.T03 AT1G48120 33.217 286 127 7 2 224 664 948 9.55e-35 132
MsG0380013754.01.T03 AT5G10900 33.591 259 135 6 2 224 234 491 2.07e-32 125
MsG0380013754.01.T03 AT5G10900 33.591 259 135 6 2 224 234 491 2.13e-32 125
MsG0380013754.01.T03 AT5G10900 33.591 259 135 6 2 224 234 491 2.41e-32 124
MsG0380013754.01.T03 AT2G42500 37.864 103 61 2 2 101 65 167 3.20e-15 72.0
MsG0380013754.01.T03 AT2G42500 39.394 99 57 2 2 97 65 163 4.63e-15 71.2
MsG0380013754.01.T03 AT2G42500 39.394 99 57 2 2 97 65 163 6.09e-15 71.2

Find 31 sgRNAs with CRISPR-Local

Find 157 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTATGGTTTAGTTTAAAT+TGG 0.258339 3:+45190495 MsG0380013754.01.T01:intron
AAGCCCTAAGGGCAACATTT+TGG 0.258401 3:+45190284 MsG0380013754.01.T01:three_prime_UTR
GTCAAACAAAGATGAGTAAA+AGG 0.303571 3:-45190547 None:intergenic
CATGAGACAAGAAGTGATTA+TGG 0.305924 3:+45190480 MsG0380013754.01.T01:intron
CTTATTACATAAGCACTTGT+AGG 0.329254 3:+45190667 MsG0380013754.01.T01:three_prime_UTR
GATGGTGACTAGAGAAGATT+TGG 0.332455 3:+45190306 MsG0380013754.01.T01:three_prime_UTR
CAAAAGAAAGTGGCATCATT+TGG 0.356170 3:-45190400 None:intergenic
CATCCAAAATGTTGCCCTTA+GGG 0.366099 3:-45190287 None:intergenic
AAGGAAACTTGTATCTTCAT+TGG 0.372881 3:+45190454 MsG0380013754.01.T01:intron
GTTTAAATTGGTTACATGAA+TGG 0.380757 3:+45190507 MsG0380013754.01.T01:intron
TAAGCCATTGGCTTGACATC+AGG 0.385233 3:-45190161 None:intergenic
TTTGAAGCTTAGGATGCATT+TGG 0.385503 3:+45190610 MsG0380013754.01.T01:three_prime_UTR
TATTTCAATAAACTCTTTAG+TGG 0.385631 3:+45190741 MsG0380013754.01.T01:three_prime_UTR
GATAGATTTATTTGAAGCTT+AGG 0.402279 3:+45190600 MsG0380013754.01.T01:intron
CCATCCAAAATGTTGCCCTT+AGG 0.410743 3:-45190288 None:intergenic
TGCTTACGTTACATCTAAGT+TGG 0.415929 3:+45190638 MsG0380013754.01.T01:three_prime_UTR
TTATTACATAAGCACTTGTA+GGG 0.434429 3:+45190668 MsG0380013754.01.T01:three_prime_UTR
CAAATCAAATCAACAATACT+TGG 0.439005 3:-45190569 None:intergenic
ATTGGTTACATGAATGGCAT+AGG 0.516147 3:+45190513 MsG0380013754.01.T01:intron
TTCAAAGCAGCACCAACCAT+TGG 0.535762 3:-45190248 None:intergenic
AAGTTGTTTGCATAAGCCAT+TGG 0.542638 3:-45190173 None:intergenic
AAGCCATTGGCTTGACATCA+GGG 0.553710 3:-45190160 None:intergenic
AATCTAGAACTGCCAATGGT+TGG 0.561144 3:+45190236 MsG0380013754.01.T01:three_prime_UTR
ATTGGCTTGACATCAGGGTG+TGG 0.600031 3:-45190155 None:intergenic
ACACCCTGATGTCAAGCCAA+TGG 0.616964 3:+45190157 MsG0380013754.01.T01:CDS
TTGATTATGAGAACATTCTG+AGG 0.627087 3:-45190196 None:intergenic
GAAAGTGGCATCATTTGGAG+AGG 0.631480 3:-45190395 None:intergenic
AAAGTGGCATCATTTGGAGA+GGG 0.638466 3:-45190394 None:intergenic
TAGCAATCTAGAACTGCCAA+TGG 0.647447 3:+45190232 MsG0380013754.01.T01:three_prime_UTR
TATTACATAAGCACTTGTAG+GGG 0.660781 3:+45190669 MsG0380013754.01.T01:three_prime_UTR
ATAAGCTGAAATCAACTCAG+AGG 0.666406 3:-45190721 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTATGTATATATGTT+CGG + Chr3:45189215-45189234 MsG0380013754.01.T01:intron 10.0%
!!! GTTTTAATAAAAAATGAAAA+TGG + Chr3:45189817-45189836 MsG0380013754.01.T01:intron 10.0%
!! GATCAATTTAAGAAAAAAAA+TGG - Chr3:45189162-45189181 None:intergenic 15.0%
!!! TTTTGTTTTGTATAATATCT+TGG + Chr3:45190343-45190362 MsG0380013754.01.T01:three_prime_UTR 15.0%
!! AATCACACAATAAACATTAT+TGG - Chr3:45188790-45188809 None:intergenic 20.0%
!! GAAAATCCATATCTATTTAA+TGG + Chr3:45188537-45188556 MsG0380013754.01.T01:CDS 20.0%
!! TATTTCAATAAACTCTTTAG+TGG + Chr3:45190741-45190760 MsG0380013754.01.T01:three_prime_UTR 20.0%
!! TTCTTGAAGGATAATAATTT+AGG + Chr3:45189351-45189370 MsG0380013754.01.T01:CDS 20.0%
!!! AGCTTAAAATGTTGAATTTT+GGG + Chr3:45189961-45189980 MsG0380013754.01.T01:intron 20.0%
!!! ATAAAAGTATTCAAGAAAGA+AGG - Chr3:45189573-45189592 None:intergenic 20.0%
!!! ATACTATTTTTGATACATCA+TGG + Chr3:45188680-45188699 MsG0380013754.01.T01:intron 20.0%
!!! GATTATGGTTTAGTTTAAAT+TGG + Chr3:45190495-45190514 MsG0380013754.01.T01:intron 20.0%
!!! TAGCTTAAAATGTTGAATTT+TGG + Chr3:45189960-45189979 MsG0380013754.01.T01:intron 20.0%
!!! TTCTTTCTTGAATACTTTTA+TGG + Chr3:45189572-45189591 MsG0380013754.01.T01:intron 20.0%
!!! TTTGTACTTTTTGTTTCTTT+TGG + Chr3:45190419-45190438 MsG0380013754.01.T01:intron 20.0%
! AAGTCACCATTAAATAGATA+TGG - Chr3:45188546-45188565 None:intergenic 25.0%
! AATACATTAAGCATCTAATC+AGG - Chr3:45188735-45188754 None:intergenic 25.0%
! ACTTAAATGCAAACAAAGTA+AGG - Chr3:45188602-45188621 None:intergenic 25.0%
! AGTATATAGATTACCTTCAT+AGG - Chr3:45189650-45189669 None:intergenic 25.0%
! ATAGTATAATGAAACCTAAC+AGG - Chr3:45188667-45188686 None:intergenic 25.0%
! ATATCTTCATTCAATTTGTG+AGG + Chr3:45190076-45190095 MsG0380013754.01.T01:intron 25.0%
! CAAATCAAATCAACAATACT+TGG - Chr3:45190572-45190591 None:intergenic 25.0%
! GTTTAAATTGGTTACATGAA+TGG + Chr3:45190507-45190526 MsG0380013754.01.T01:intron 25.0%
! TTATTACATAAGCACTTGTA+GGG + Chr3:45190668-45190687 MsG0380013754.01.T01:three_prime_UTR 25.0%
!! AACATTTGTTGAACTATTTG+CGG + Chr3:45188987-45189006 MsG0380013754.01.T01:CDS 25.0%
!! ACAAAAAGTACAAAAGAAAG+TGG - Chr3:45190413-45190432 None:intergenic 25.0%
!! ACATTAATATAAGAAGTGTG+TGG - Chr3:45189606-45189625 None:intergenic 25.0%
!! GACATACTTTCTTATTGATT+TGG + Chr3:45190111-45190130 MsG0380013754.01.T01:intron 25.0%
!! GATAGATTTATTTGAAGCTT+AGG + Chr3:45190600-45190619 MsG0380013754.01.T01:intron 25.0%
!! TTTCATTGTTTTCTGTAGAT+GGG + Chr3:45189674-45189693 MsG0380013754.01.T01:intron 25.0%
!! TTTTCATTGTTTTCTGTAGA+TGG + Chr3:45189673-45189692 MsG0380013754.01.T01:intron 25.0%
!!! AACAAGATATATGGTTTTGA+GGG + Chr3:45188940-45188959 MsG0380013754.01.T01:CDS 25.0%
!!! GTTGATTTGATTTGAGTTTT+TGG + Chr3:45190578-45190597 MsG0380013754.01.T01:intron 25.0%
AAGGAAACTTGTATCTTCAT+TGG + Chr3:45190454-45190473 MsG0380013754.01.T01:intron 30.0%
AATCACTTATCTTCCTATGA+AGG + Chr3:45189634-45189653 MsG0380013754.01.T01:intron 30.0%
AGAAAGAAGGTTGTAACAAA+AGG - Chr3:45189560-45189579 None:intergenic 30.0%
AGAATCATGTTGTCAAATAC+TGG + Chr3:45189843-45189862 MsG0380013754.01.T01:intron 30.0%
ATATATGTTCGGTATGTGTA+GGG + Chr3:45189226-45189245 MsG0380013754.01.T01:intron 30.0%
ATTCAATTTGTGAGGTTATG+TGG + Chr3:45190084-45190103 MsG0380013754.01.T01:intron 30.0%
CACAAAACCGATTAATTGAT+CGG - Chr3:45189113-45189132 None:intergenic 30.0%
CTGAAATCCGATCAATTAAT+CGG + Chr3:45189103-45189122 MsG0380013754.01.T01:CDS 30.0%
CTTATTACATAAGCACTTGT+AGG + Chr3:45190667-45190686 MsG0380013754.01.T01:three_prime_UTR 30.0%
CTTTCTTTATTAAGCCTGTT+AGG + Chr3:45188650-45188669 MsG0380013754.01.T01:intron 30.0%
GAAAGAAGGTTGTAACAAAA+GGG - Chr3:45189559-45189578 None:intergenic 30.0%
GCTTAATAAAGAAAGAGCTA+GGG - Chr3:45188645-45188664 None:intergenic 30.0%
GTCAAACAAAGATGAGTAAA+AGG - Chr3:45190550-45190569 None:intergenic 30.0%
TATATATGTTCGGTATGTGT+AGG + Chr3:45189225-45189244 MsG0380013754.01.T01:intron 30.0%
TATTACATAAGCACTTGTAG+GGG + Chr3:45190669-45190688 MsG0380013754.01.T01:three_prime_UTR 30.0%
TCTATTTAATGGTGACTTTG+TGG + Chr3:45188548-45188567 MsG0380013754.01.T01:CDS 30.0%
TGTTACAAAAAGGTTCTTGA+AGG + Chr3:45189338-45189357 MsG0380013754.01.T01:CDS 30.0%
TTGATTATGAGAACATTCTG+AGG - Chr3:45190199-45190218 None:intergenic 30.0%
! AAGAGCATGAACAAGATATA+TGG + Chr3:45188931-45188950 MsG0380013754.01.T01:CDS 30.0%
! AATTTAGGTATGTTTTCCAC+TGG + Chr3:45189366-45189385 MsG0380013754.01.T01:intron 30.0%
! CTTTTGGTAAACAAAGTGTA+AGG + Chr3:45190435-45190454 MsG0380013754.01.T01:intron 30.0%
!! CTGAATATTTTTGAGCTCAA+CGG + Chr3:45188501-45188520 MsG0380013754.01.T01:CDS 30.0%
!! GAACAAGATATATGGTTTTG+AGG + Chr3:45188939-45188958 MsG0380013754.01.T01:CDS 30.0%
!! TGAATATTTTTGAGCTCAAC+GGG + Chr3:45188502-45188521 MsG0380013754.01.T01:CDS 30.0%
AAGTTGTTTGCATAAGCCAT+TGG - Chr3:45190176-45190195 None:intergenic 35.0%
AGGTTGTAACAAAAGGGATA+TGG - Chr3:45189553-45189572 None:intergenic 35.0%
ATAAGCTGAAATCAACTCAG+AGG - Chr3:45190724-45190743 None:intergenic 35.0%
ATTGGTTACATGAATGGCAT+AGG + Chr3:45190513-45190532 MsG0380013754.01.T01:intron 35.0%
CAAAAGAAAGTGGCATCATT+TGG - Chr3:45190403-45190422 None:intergenic 35.0%
CATGAGACAAGAAGTGATTA+TGG + Chr3:45190480-45190499 MsG0380013754.01.T01:intron 35.0%
GAAATTAAGTATCAGACCAG+TGG - Chr3:45189385-45189404 None:intergenic 35.0%
GATATTTCACATCTGTCACA+TGG + Chr3:45189898-45189917 MsG0380013754.01.T01:intron 35.0%
GCTGCAAATGTAGTAATGTT+GGG - Chr3:45189743-45189762 None:intergenic 35.0%
GGCTTAATAAAGAAAGAGCT+AGG - Chr3:45188646-45188665 None:intergenic 35.0%
GTAATGTTGGGTTTCAAATC+AGG - Chr3:45189731-45189750 None:intergenic 35.0%
GTTACCTGATCACAGTAATT+TGG - Chr3:45189531-45189550 None:intergenic 35.0%
TCAGCTATATATCTAGCTAG+AGG + Chr3:45188895-45188914 MsG0380013754.01.T01:intron 35.0%
TCTGTAATCGATAACACTGT+AGG + Chr3:45190004-45190023 MsG0380013754.01.T01:intron 35.0%
TGCTGCAAATGTAGTAATGT+TGG - Chr3:45189744-45189763 None:intergenic 35.0%
TGCTTACGTTACATCTAAGT+TGG + Chr3:45190638-45190657 MsG0380013754.01.T01:three_prime_UTR 35.0%
TTCAATTCACTCAGTTAGCT+GGG + Chr3:45188840-45188859 MsG0380013754.01.T01:intron 35.0%
TTTCAATTCACTCAGTTAGC+TGG + Chr3:45188839-45188858 MsG0380013754.01.T01:intron 35.0%
TTTCTGTAGATGGGTAACAA+AGG + Chr3:45189683-45189702 MsG0380013754.01.T01:intron 35.0%
! AATATAAGAAGTGTGTGGCA+CGG - Chr3:45189601-45189620 None:intergenic 35.0%
! ACAGTGTTATCGATTACAGA+TGG - Chr3:45190004-45190023 None:intergenic 35.0%
! AGAAAGTTTTCGTAGTCCAT+GGG + Chr3:45189049-45189068 MsG0380013754.01.T01:CDS 35.0%
! AGATATGGATTTTCTTCCGA+AGG - Chr3:45188531-45188550 None:intergenic 35.0%
! AGTATTCTGCTGTTTACCTT+TGG + Chr3:45189011-45189030 MsG0380013754.01.T01:CDS 35.0%
! TTTGAAGCTTAGGATGCATT+TGG + Chr3:45190610-45190629 MsG0380013754.01.T01:three_prime_UTR 35.0%
!!! GTCTAAGTTTTAAGCCCTAA+GGG + Chr3:45190273-45190292 MsG0380013754.01.T01:three_prime_UTR 35.0%
!!! TGTCTAAGTTTTAAGCCCTA+AGG + Chr3:45190272-45190291 MsG0380013754.01.T01:three_prime_UTR 35.0%
AAAGTGGCATCATTTGGAGA+GGG - Chr3:45190397-45190416 None:intergenic 40.0%
AATGGTGACTTTGTGGATAG+AGG + Chr3:45188555-45188574 MsG0380013754.01.T01:CDS 40.0%
AATTAGCCATGGTGTTTCCA+TGG - Chr3:45189869-45189888 None:intergenic 40.0%
AGGCGCTTCAAAACGAATAA+AGG - Chr3:45189711-45189730 None:intergenic 40.0%
ATCTCATGAAGTAAAGGACG+AGG + Chr3:45189458-45189477 MsG0380013754.01.T01:CDS 40.0%
ATGTTGTCAAATACTGGCCA+TGG + Chr3:45189849-45189868 MsG0380013754.01.T01:intron 40.0%
CATCCAAAATGTTGCCCTTA+GGG - Chr3:45190290-45190309 None:intergenic 40.0%
CATGGCCAATTTGTGAATGA+TGG + Chr3:45189916-45189935 MsG0380013754.01.T01:intron 40.0%
CATTACTACATTTGCAGCAG+TGG + Chr3:45189745-45189764 MsG0380013754.01.T01:CDS 40.0%
GATGGTGACTAGAGAAGATT+TGG + Chr3:45190306-45190325 MsG0380013754.01.T01:three_prime_UTR 40.0%
TAAGCTACCATAGAACACCA+TGG - Chr3:45189947-45189966 None:intergenic 40.0%
TCGTTTATCACATGAGCCAA+AGG - Chr3:45189030-45189049 None:intergenic 40.0%
TCTCATGAAGTAAAGGACGA+GGG + Chr3:45189459-45189478 MsG0380013754.01.T01:CDS 40.0%
TGCCACCATCATTCACAAAT+TGG - Chr3:45189924-45189943 None:intergenic 40.0%
TGCTCCAAATTACTGTGATC+AGG + Chr3:45189524-45189543 MsG0380013754.01.T01:CDS 40.0%
TGGCTGCAAATTCAACAAAG+TGG - Chr3:45190138-45190157 None:intergenic 40.0%
TGTGCGATCTCATGAAGTAA+AGG + Chr3:45189452-45189471 MsG0380013754.01.T01:CDS 40.0%
TTTAAGTGCATGTCTCCATC+AGG + Chr3:45188615-45188634 MsG0380013754.01.T01:CDS 40.0%
! AAAGTTTTCGTAGTCCATGG+GGG + Chr3:45189051-45189070 MsG0380013754.01.T01:CDS 40.0%
! AATCTAGAACTGCCAATGGT+TGG + Chr3:45190236-45190255 MsG0380013754.01.T01:three_prime_UTR 40.0%
! GAAAGTTTTCGTAGTCCATG+GGG + Chr3:45189050-45189069 MsG0380013754.01.T01:CDS 40.0%
! GAGAAAGTTTTCGTAGTCCA+TGG + Chr3:45189048-45189067 MsG0380013754.01.T01:CDS 40.0%
! GGATAGAGGATCGTTTTCTT+TGG + Chr3:45188569-45188588 MsG0380013754.01.T01:CDS 40.0%
! GGTTATGAGGTTGATCATGA+CGG + Chr3:45189480-45189499 MsG0380013754.01.T01:CDS 40.0%
! TAGCAATCTAGAACTGCCAA+TGG + Chr3:45190232-45190251 MsG0380013754.01.T01:three_prime_UTR 40.0%
!!! GATATATGGTTTTGAGGGTG+AGG + Chr3:45188945-45188964 MsG0380013754.01.T01:CDS 40.0%
!!! GGGGTCTTTTTAGTGTTGAT+GGG + Chr3:45189070-45189089 MsG0380013754.01.T01:CDS 40.0%
!!! GGGTCTTTTTAGTGTTGATG+GGG + Chr3:45189071-45189090 MsG0380013754.01.T01:CDS 40.0%
AACACCATGGCTAATTGCAG+TGG + Chr3:45189873-45189892 MsG0380013754.01.T01:intron 45.0%
AAGAGCTAGGGTTTACCTGA+TGG - Chr3:45188633-45188652 None:intergenic 45.0%
AGTAAAGGACGAGGGTTATG+AGG + Chr3:45189467-45189486 MsG0380013754.01.T01:CDS 45.0%
CAACACTAAAAAGACCCCCA+TGG - Chr3:45189068-45189087 None:intergenic 45.0%
CCATCCAAAATGTTGCCCTT+AGG - Chr3:45190291-45190310 None:intergenic 45.0%
GAAAGTGGCATCATTTGGAG+AGG - Chr3:45190398-45190417 None:intergenic 45.0%
GGCCAATTTGTGAATGATGG+TGG + Chr3:45189919-45189938 MsG0380013754.01.T01:intron 45.0%
TAACATCCCCACCGAAAGAA+AGG - Chr3:45189323-45189342 None:intergenic 45.0%
TCGGTGGGGATGTTACAAAA+AGG + Chr3:45189328-45189347 MsG0380013754.01.T01:CDS 45.0%
TGGTGCATCTATACCTTCCT+CGG - Chr3:45189142-45189161 None:intergenic 45.0%
TTCAAAGCAGCACCAACCAT+TGG - Chr3:45190251-45190270 None:intergenic 45.0%
! AAGCCCTAAGGGCAACATTT+TGG + Chr3:45190284-45190303 MsG0380013754.01.T01:three_prime_UTR 45.0%
! CCTAAGGGCAACATTTTGGA+TGG + Chr3:45190288-45190307 MsG0380013754.01.T01:three_prime_UTR 45.0%
! GGTTGATGTGTGAGTTGCTA+TGG + Chr3:45189247-45189266 MsG0380013754.01.T01:CDS 45.0%
!! AAGCCATTGGCTTGACATCA+GGG - Chr3:45190163-45190182 None:intergenic 45.0%
!! GGGGGTCTTTTTAGTGTTGA+TGG + Chr3:45189069-45189088 MsG0380013754.01.T01:CDS 45.0%
!! TAAGCCATTGGCTTGACATC+AGG - Chr3:45190164-45190183 None:intergenic 45.0%
ACACCCTGATGTCAAGCCAA+TGG + Chr3:45190157-45190176 MsG0380013754.01.T01:CDS 50.0%
CGATTACAGATGGCAGACGA+GGG - Chr3:45189994-45190013 None:intergenic 50.0%
CGTGGTGTAGGCCTTTCTTT+CGG + Chr3:45189309-45189328 MsG0380013754.01.T01:CDS 50.0%
GGTGCATCTATACCTTCCTC+GGG - Chr3:45189141-45189160 None:intergenic 50.0%
GTGTAGGCCTTTCTTTCGGT+GGG + Chr3:45189313-45189332 MsG0380013754.01.T01:CDS 50.0%
TACTGGCCATGGAAACACCA+TGG + Chr3:45189860-45189879 MsG0380013754.01.T01:intron 50.0%
TCGATTACAGATGGCAGACG+AGG - Chr3:45189995-45190014 None:intergenic 50.0%
TCTGCCACTGCAATTAGCCA+TGG - Chr3:45189880-45189899 None:intergenic 50.0%
TGTAGGCCTTTCTTTCGGTG+GGG + Chr3:45189314-45189333 MsG0380013754.01.T01:CDS 50.0%
!! ATTGGCTTGACATCAGGGTG+TGG - Chr3:45190158-45190177 None:intergenic 50.0%
!! TGTGAATGATGGTGGCACCA+TGG + Chr3:45189927-45189946 MsG0380013754.01.T01:intron 50.0%
GCATCTATACCTTCCTCGGG+AGG - Chr3:45189138-45189157 None:intergenic 55.0%
GGTGGCACCATGGTGTTCTA+TGG + Chr3:45189937-45189956 MsG0380013754.01.T01:intron 55.0%
GGTGTAGGCCTTTCTTTCGG+TGG + Chr3:45189312-45189331 MsG0380013754.01.T01:CDS 55.0%
TCCTCTTCCAGGGAGAGGTT+GGG - Chr3:45189280-45189299 None:intergenic 55.0%
! GCTTGCTAGGTCCTCTTCCA+GGG - Chr3:45189290-45189309 None:intergenic 55.0%
! TTTTGTGAGCCTCCCGAGGA+AGG + Chr3:45189126-45189145 MsG0380013754.01.T01:CDS 55.0%
AGGCCTACACCACGCTTGCT+AGG - Chr3:45189303-45189322 None:intergenic 60.0%
AGTGATCCCCAACCTCTCCC+TGG + Chr3:45189270-45189289 MsG0380013754.01.T01:CDS 60.0%
CCTCTTCCAGGGAGAGGTTG+GGG - Chr3:45189279-45189298 None:intergenic 60.0%
CTAGGTCCTCTTCCAGGGAG+AGG - Chr3:45189285-45189304 None:intergenic 60.0%
GGAAGAGGACCTAGCAAGCG+TGG + Chr3:45189291-45189310 MsG0380013754.01.T01:CDS 60.0%
GGACCTAGCAAGCGTGGTGT+AGG + Chr3:45189297-45189316 MsG0380013754.01.T01:CDS 60.0%
GTCCTCTTCCAGGGAGAGGT+TGG - Chr3:45189281-45189300 None:intergenic 60.0%
! CGCTTGCTAGGTCCTCTTCC+AGG - Chr3:45189291-45189310 None:intergenic 60.0%
!! TCGGTTTTGTGAGCCTCCCG+AGG + Chr3:45189122-45189141 MsG0380013754.01.T01:CDS 60.0%
!! TGAGCTCAACGGGCTGCCTT+CGG + Chr3:45188512-45188531 MsG0380013754.01.T01:CDS 60.0%
CCCCAACCTCTCCCTGGAAG+AGG + Chr3:45189276-45189295 MsG0380013754.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 45188483 45190806 45188483 ID=MsG0380013754.01;Name=MsG0380013754.01
Chr3 mRNA 45188483 45190806 45188483 ID=MsG0380013754.01.T01;Parent=MsG0380013754.01;Name=MsG0380013754.01.T01;_AED=0.47;_eAED=0.47;_QI=0|1|0.85|1|0.66|0.57|7|350|254
Chr3 exon 45190155 45190362 45190155 ID=MsG0380013754.01.T01:exon:4650;Parent=MsG0380013754.01.T01
Chr3 exon 45190605 45190806 45190605 ID=MsG0380013754.01.T01:exon:4651;Parent=MsG0380013754.01.T01
Chr3 CDS 45188483 45188636 45188483 ID=MsG0380013754.01.T01:cds;Parent=MsG0380013754.01.T01
Chr3 CDS 45188899 45189147 45188899 ID=MsG0380013754.01.T01:cds;Parent=MsG0380013754.01.T01
Chr3 CDS 45189247 45189372 45189247 ID=MsG0380013754.01.T01:cds;Parent=MsG0380013754.01.T01
Chr3 CDS 45189445 45189545 45189445 ID=MsG0380013754.01.T01:cds;Parent=MsG0380013754.01.T01
Chr3 CDS 45189692 45189766 45189692 ID=MsG0380013754.01.T01:cds;Parent=MsG0380013754.01.T01
Chr3 CDS 45190155 45190214 45190155 ID=MsG0380013754.01.T01:cds;Parent=MsG0380013754.01.T01
Chr3 three_prime_UTR 45190215 45190362 45190215 ID=MsG0380013754.01.T01:three_prime_utr;Parent=MsG0380013754.01.T01
Chr3 three_prime_UTR 45190605 45190806 45190605 ID=MsG0380013754.01.T01:three_prime_utr;Parent=MsG0380013754.01.T01
Chr3 mRNA 45188483 45190509 45188483 ID=MsG0380013754.01.T02;Parent=MsG0380013754.01;Name=MsG0380013754.01.T02;_AED=0.47;_eAED=0.47;_QI=0|1|0.85|1|0.66|0.57|7|253|254
Chr3 exon 45190155 45190305 45190155 ID=MsG0380013754.01.T02:exon:4652;Parent=MsG0380013754.01.T02
Chr3 exon 45190348 45190509 45190348 ID=MsG0380013754.01.T02:exon:4653;Parent=MsG0380013754.01.T02
Chr3 CDS 45188483 45188636 45188483 ID=MsG0380013754.01.T02:cds;Parent=MsG0380013754.01.T02
Chr3 CDS 45188899 45189147 45188899 ID=MsG0380013754.01.T02:cds;Parent=MsG0380013754.01.T02
Chr3 CDS 45189247 45189372 45189247 ID=MsG0380013754.01.T02:cds;Parent=MsG0380013754.01.T02
Chr3 CDS 45189445 45189545 45189445 ID=MsG0380013754.01.T02:cds;Parent=MsG0380013754.01.T02
Chr3 CDS 45189692 45189766 45189692 ID=MsG0380013754.01.T02:cds;Parent=MsG0380013754.01.T02
Chr3 CDS 45190155 45190214 45190155 ID=MsG0380013754.01.T02:cds;Parent=MsG0380013754.01.T02
Chr3 three_prime_UTR 45190215 45190305 45190215 ID=MsG0380013754.01.T02:three_prime_utr;Parent=MsG0380013754.01.T02
Chr3 three_prime_UTR 45190348 45190509 45190348 ID=MsG0380013754.01.T02:three_prime_utr;Parent=MsG0380013754.01.T02
Chr3 mRNA 45188483 45190590 45188483 ID=MsG0380013754.01.T03;Parent=MsG0380013754.01;Name=MsG0380013754.01.T03;_AED=0.47;_eAED=0.47;_QI=0|1|0.83|1|0.8|0.66|6|376|254
Chr3 exon 45190155 45190590 45190155 ID=MsG0380013754.01.T03:exon:4654;Parent=MsG0380013754.01.T03
Chr3 CDS 45188483 45188636 45188483 ID=MsG0380013754.01.T03:cds;Parent=MsG0380013754.01.T03
Chr3 CDS 45188899 45189147 45188899 ID=MsG0380013754.01.T03:cds;Parent=MsG0380013754.01.T03
Chr3 CDS 45189247 45189372 45189247 ID=MsG0380013754.01.T03:cds;Parent=MsG0380013754.01.T03
Chr3 CDS 45189445 45189545 45189445 ID=MsG0380013754.01.T03:cds;Parent=MsG0380013754.01.T03
Chr3 CDS 45189692 45189766 45189692 ID=MsG0380013754.01.T03:cds;Parent=MsG0380013754.01.T03
Chr3 CDS 45190155 45190214 45190155 ID=MsG0380013754.01.T03:cds;Parent=MsG0380013754.01.T03
Chr3 three_prime_UTR 45190215 45190590 45190215 ID=MsG0380013754.01.T03:three_prime_utr;Parent=MsG0380013754.01.T03
Gene Sequence

>MsG0380013754.01.T01

CTGCAGTTCTACGATCTTCTGAATATTTTTGAGCTCAACGGGCTGCCTTCGGAAGAAAATCCATATCTATTTAATGGTGACTTTGTGGATAGAGGATCGTTTTCTTTGGAAGTCATCCTTACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCTATATATCTAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATATGGTTTTGAGGGTGAGGTGCGCTCAAAGCTGAATGAAACATTTGTTGAACTATTTGCGGAAGTATTCTGCTGTTTACCTTTGGCTCATGTGATAAACGAGAAAGTTTTCGTAGTCCATGGGGGTCTTTTTAGTGTTGATGGGGTCAAACTCTCTGAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCCGAGGAAGGGTTGATGTGTGAGTTGCTATGGAGTGATCCCCAACCTCTCCCTGGAAGAGGACCTAGCAAGCGTGGTGTAGGCCTTTCTTTCGGTGGGGATGTTACAAAAAGGTTCTTGAAGGATAATAATTTAGATTTAGTTGTGCGATCTCATGAAGTAAAGGACGAGGGTTATGAGGTTGATCATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGATGGGTAACAAAGGTGCCTTTATTCGTTTTGAAGCGCCTGATTTGAAACCCAACATTACTACATTTGCAGCAGTGCCACACCCTGATGTCAAGCCAATGGCTTATGCAAACAACTTCCTCAGAATGTTCTCATAA

>MsG0380013754.01.T02

CTGCAGTTCTACGATCTTCTGAATATTTTTGAGCTCAACGGGCTGCCTTCGGAAGAAAATCCATATCTATTTAATGGTGACTTTGTGGATAGAGGATCGTTTTCTTTGGAAGTCATCCTTACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCTATATATCTAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATATGGTTTTGAGGGTGAGGTGCGCTCAAAGCTGAATGAAACATTTGTTGAACTATTTGCGGAAGTATTCTGCTGTTTACCTTTGGCTCATGTGATAAACGAGAAAGTTTTCGTAGTCCATGGGGGTCTTTTTAGTGTTGATGGGGTCAAACTCTCTGAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCCGAGGAAGGGTTGATGTGTGAGTTGCTATGGAGTGATCCCCAACCTCTCCCTGGAAGAGGACCTAGCAAGCGTGGTGTAGGCCTTTCTTTCGGTGGGGATGTTACAAAAAGGTTCTTGAAGGATAATAATTTAGATTTAGTTGTGCGATCTCATGAAGTAAAGGACGAGGGTTATGAGGTTGATCATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGATGGGTAACAAAGGTGCCTTTATTCGTTTTGAAGCGCCTGATTTGAAACCCAACATTACTACATTTGCAGCAGTGCCACACCCTGATGTCAAGCCAATGGCTTATGCAAACAACTTCCTCAGAATGTTCTCATAA

>MsG0380013754.01.T03

CTGCAGTTCTACGATCTTCTGAATATTTTTGAGCTCAACGGGCTGCCTTCGGAAGAAAATCCATATCTATTTAATGGTGACTTTGTGGATAGAGGATCGTTTTCTTTGGAAGTCATCCTTACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCTATATATCTAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATATGGTTTTGAGGGTGAGGTGCGCTCAAAGCTGAATGAAACATTTGTTGAACTATTTGCGGAAGTATTCTGCTGTTTACCTTTGGCTCATGTGATAAACGAGAAAGTTTTCGTAGTCCATGGGGGTCTTTTTAGTGTTGATGGGGTCAAACTCTCTGAAATCCGATCAATTAATCGGTTTTGTGAGCCTCCCGAGGAAGGGTTGATGTGTGAGTTGCTATGGAGTGATCCCCAACCTCTCCCTGGAAGAGGACCTAGCAAGCGTGGTGTAGGCCTTTCTTTCGGTGGGGATGTTACAAAAAGGTTCTTGAAGGATAATAATTTAGATTTAGTTGTGCGATCTCATGAAGTAAAGGACGAGGGTTATGAGGTTGATCATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGATGGGTAACAAAGGTGCCTTTATTCGTTTTGAAGCGCCTGATTTGAAACCCAACATTACTACATTTGCAGCAGTGCCACACCCTGATGTCAAGCCAATGGCTTATGCAAACAACTTCCTCAGAATGTTCTCATAA

Protein sequence

>MsG0380013754.01.T01

LQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLNETFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSEIRSINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGGDVTKRFLKDNNLDLVVRSHEVKDEGYEVDHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNITTFAAVPHPDVKPMAYANNFLRMFS*

>MsG0380013754.01.T02

LQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLNETFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSEIRSINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGGDVTKRFLKDNNLDLVVRSHEVKDEGYEVDHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNITTFAAVPHPDVKPMAYANNFLRMFS*

>MsG0380013754.01.T03

LQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLNETFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSEIRSINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGGDVTKRFLKDNNLDLVVRSHEVKDEGYEVDHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNITTFAAVPHPDVKPMAYANNFLRMFS*