Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038587.01.T02 | XP_013448778.1 | 100 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 8.58E-90 | 269 |
| MsG0780038587.01.T01 | XP_013448778.1 | 99.301 | 143 | 1 | 0 | 1 | 143 | 1 | 143 | 3.98E-99 | 295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038587.01.T01 | Q9FKC0 | 91.608 | 143 | 12 | 0 | 1 | 143 | 1 | 143 | 3.41E-95 | 278 |
| MsG0780038587.01.T02 | Q9FKC0 | 92.308 | 130 | 10 | 0 | 1 | 130 | 1 | 130 | 3.21E-87 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038587.01.T01 | B7FGF9 | 99.301 | 143 | 1 | 0 | 1 | 143 | 1 | 143 | 1.90e-99 | 295 |
| MsG0780038587.01.T02 | B7FGF9 | 100.000 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 4.10e-90 | 269 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0780038587.01 | 0.800369 | 1.488943e-48 | 6.920930e-46 |
| MsG0080048197.01 | MsG0780038587.01 | 0.851414 | 9.016922e-61 | 1.823777e-57 |
| MsG0080048216.01 | MsG0780038587.01 | 0.819219 | 1.302795e-52 | 9.964264e-50 |
| MsG0080048687.01 | MsG0780038587.01 | 0.920090 | 1.986146e-87 | 6.605208e-83 |
| MsG0080048968.01 | MsG0780038587.01 | 0.833671 | 4.664350e-56 | 5.408913e-53 |
| MsG0080048971.01 | MsG0780038587.01 | 0.922842 | 5.807268e-89 | 2.248514e-84 |
| MsG0080049135.01 | MsG0780038587.01 | 0.818392 | 2.007660e-52 | 1.500980e-49 |
| MsG0180000139.01 | MsG0780038587.01 | 0.841885 | 3.621525e-58 | 5.396157e-55 |
| MsG0180000318.01 | MsG0780038587.01 | -0.812911 | 3.339829e-51 | 2.150110e-48 |
| MsG0180000339.01 | MsG0780038587.01 | 0.913660 | 4.752965e-84 | 1.136265e-79 |
| MsG0180000575.01 | MsG0780038587.01 | 0.869923 | 2.150937e-66 | 8.213457e-63 |
| MsG0180000614.01 | MsG0780038587.01 | 0.852695 | 3.898998e-61 | 8.214983e-58 |
| MsG0180000615.01 | MsG0780038587.01 | 0.832384 | 9.749088e-56 | 1.087904e-52 |
| MsG0180000743.01 | MsG0780038587.01 | 0.866932 | 1.985423e-65 | 6.809982e-62 |
| MsG0180000824.01 | MsG0780038587.01 | 0.809571 | 1.771429e-50 | 1.043792e-47 |
| MsG0180001260.01 | MsG0780038587.01 | 0.811597 | 6.466924e-51 | 4.019625e-48 |
| MsG0180003115.01 | MsG0780038587.01 | 0.836664 | 8.198326e-57 | 1.040084e-53 |
| MsG0180003117.01 | MsG0780038587.01 | 0.818888 | 1.549779e-52 | 1.174628e-49 |
| MsG0180003302.01 | MsG0780038587.01 | 0.837119 | 6.271884e-57 | 8.067249e-54 |
| MsG0180003313.01 | MsG0780038587.01 | 0.837499 | 5.015369e-57 | 6.527434e-54 |
| MsG0180003612.01 | MsG0780038587.01 | 0.806076 | 9.802955e-50 | 5.271883e-47 |
| MsG0180003651.01 | MsG0780038587.01 | 0.809489 | 1.844987e-50 | 1.084705e-47 |
| MsG0180003793.01 | MsG0780038587.01 | 0.929674 | 4.947322e-93 | 2.799738e-88 |
| MsG0180004009.01 | MsG0780038587.01 | 0.867109 | 1.743909e-65 | 6.016898e-62 |
| MsG0180004050.01 | MsG0780038587.01 | 0.828953 | 6.748537e-55 | 6.808695e-52 |
| MsG0180004129.01 | MsG0780038587.01 | 0.876843 | 1.011595e-68 | 4.978609e-65 |
| MsG0180004130.01 | MsG0780038587.01 | 0.895558 | 8.548494e-76 | 8.914986e-72 |
| MsG0180004335.01 | MsG0780038587.01 | -0.825378 | 4.844497e-54 | 4.407962e-51 |
| MsG0180004481.01 | MsG0780038587.01 | 0.832977 | 6.946212e-56 | 7.890181e-53 |
| MsG0180004482.01 | MsG0780038587.01 | 0.817687 | 2.897374e-52 | 2.124481e-49 |
| MsG0180004509.01 | MsG0780038587.01 | 0.879238 | 1.466543e-69 | 7.892251e-66 |
| MsG0180004622.01 | MsG0780038587.01 | 0.813563 | 2.403098e-51 | 1.574613e-48 |
| MsG0180004767.01 | MsG0780038587.01 | 0.815316 | 9.841780e-52 | 6.762640e-49 |
| MsG0180004854.01 | MsG0780038587.01 | 0.871479 | 6.625289e-67 | 2.676794e-63 |
| MsG0180004861.01 | MsG0780038587.01 | 0.857145 | 1.992521e-62 | 4.869894e-59 |
| MsG0180004991.01 | MsG0780038587.01 | 0.804597 | 2.001846e-49 | 1.036369e-46 |
| MsG0180005361.01 | MsG0780038587.01 | 0.848534 | 5.765589e-60 | 1.061372e-56 |
| MsG0180005366.01 | MsG0780038587.01 | 0.855678 | 5.371236e-62 | 1.250035e-58 |
| MsG0180005407.01 | MsG0780038587.01 | 0.805396 | 1.362040e-49 | 7.198046e-47 |
| MsG0180005426.01 | MsG0780038587.01 | 0.902327 | 1.086254e-78 | 1.529959e-74 |
| MsG0180005659.01 | MsG0780038587.01 | 0.816015 | 6.876114e-52 | 4.816345e-49 |
| MsG0180005851.01 | MsG0780038587.01 | 0.846776 | 1.756392e-59 | 3.056384e-56 |
| MsG0180006013.01 | MsG0780038587.01 | 0.848466 | 6.020011e-60 | 1.105929e-56 |
| MsG0180006041.01 | MsG0780038587.01 | 0.841723 | 3.997464e-58 | 5.925521e-55 |
| MsG0280006406.01 | MsG0780038587.01 | 0.814256 | 1.689960e-51 | 1.128379e-48 |
| MsG0280006422.01 | MsG0780038587.01 | 0.820765 | 5.768539e-53 | 4.606064e-50 |
| MsG0280006424.01 | MsG0780038587.01 | 0.864354 | 1.291680e-64 | 4.043578e-61 |
| MsG0280010776.01 | MsG0780038587.01 | 0.844023 | 9.768655e-59 | 1.556812e-55 |
| MsG0280010801.01 | MsG0780038587.01 | 0.934452 | 3.954399e-96 | 2.986679e-91 |
| MsG0280011234.01 | MsG0780038587.01 | 0.879981 | 7.989114e-70 | 4.424294e-66 |
| MsG0280011387.01 | MsG0780038587.01 | 0.807804 | 4.225674e-50 | 2.376173e-47 |
| MsG0380011614.01 | MsG0780038587.01 | 0.834588 | 2.748189e-56 | 3.276129e-53 |
| MsG0380012073.01 | MsG0780038587.01 | 0.957382 | 3.102641e-115 | 1.069605e-109 |
| MsG0380012108.01 | MsG0780038587.01 | 0.816975 | 4.190310e-52 | 3.013378e-49 |
| MsG0380014330.01 | MsG0780038587.01 | 0.801065 | 1.073424e-48 | 5.078480e-46 |
| MsG0380014539.01 | MsG0780038587.01 | 0.841315 | 5.120388e-58 | 7.494022e-55 |
| MsG0680031615.01 | MsG0780038587.01 | 0.810079 | 1.377650e-50 | 8.226285e-48 |
| MsG0680031628.01 | MsG0780038587.01 | 0.815182 | 1.053679e-51 | 7.213477e-49 |
| MsG0680031763.01 | MsG0780038587.01 | 0.818974 | 1.480871e-52 | 1.125186e-49 |
| MsG0680032430.01 | MsG0780038587.01 | 0.804588 | 2.010342e-49 | 1.040533e-46 |
| MsG0680032770.01 | MsG0780038587.01 | 0.910227 | 2.370743e-82 | 4.793149e-78 |
| MsG0680034061.01 | MsG0780038587.01 | 0.834466 | 2.949439e-56 | 3.503274e-53 |
| MsG0680034671.01 | MsG0780038587.01 | 0.859952 | 2.896200e-63 | 7.785694e-60 |
| MsG0680035306.01 | MsG0780038587.01 | 0.837117 | 6.280432e-57 | 8.077801e-54 |
| MsG0480018477.01 | MsG0780038587.01 | 0.908725 | 1.249164e-81 | 2.350120e-77 |
| MsG0480018894.01 | MsG0780038587.01 | 0.815017 | 1.146499e-51 | 7.814116e-49 |
| MsG0480019486.01 | MsG0780038587.01 | 0.840942 | 6.415994e-58 | 9.282749e-55 |
| MsG0480019670.01 | MsG0780038587.01 | 0.808503 | 2.999199e-50 | 1.717824e-47 |
| MsG0480020959.01 | MsG0780038587.01 | 0.861790 | 8.011480e-64 | 2.293444e-60 |
| MsG0480021006.01 | MsG0780038587.01 | 0.887082 | 1.949695e-72 | 1.429187e-68 |
| MsG0480021159.01 | MsG0780038587.01 | 0.862560 | 4.647688e-64 | 1.366857e-60 |
| MsG0480021448.01 | MsG0780038587.01 | 0.817102 | 3.925245e-52 | 2.832283e-49 |
| MsG0480021453.01 | MsG0780038587.01 | 0.816143 | 6.436505e-52 | 4.524244e-49 |
| MsG0480021812.01 | MsG0780038587.01 | 0.806782 | 6.960414e-50 | 3.811266e-47 |
| MsG0480021832.01 | MsG0780038587.01 | 0.872613 | 2.778880e-67 | 1.170381e-63 |
| MsG0480021842.01 | MsG0780038587.01 | 0.800476 | 1.416028e-48 | 6.599532e-46 |
| MsG0480022035.01 | MsG0780038587.01 | 0.815196 | 1.046319e-51 | 7.165680e-49 |
| MsG0480022223.01 | MsG0780038587.01 | 0.815806 | 7.655814e-52 | 5.331796e-49 |
| MsG0480022836.01 | MsG0780038587.01 | 0.804168 | 2.458436e-49 | 1.258803e-46 |
| MsG0480022913.01 | MsG0780038587.01 | 0.846839 | 1.688105e-59 | 2.943378e-56 |
| MsG0480022960.01 | MsG0780038587.01 | 0.877642 | 5.332799e-69 | 2.701538e-65 |
| MsG0480023149.01 | MsG0780038587.01 | 0.937778 | 1.991230e-98 | 1.841008e-93 |
| MsG0480023221.01 | MsG0780038587.01 | 0.817468 | 3.245966e-52 | 2.366018e-49 |
| MsG0480023361.01 | MsG0780038587.01 | 0.804556 | 2.040977e-49 | 1.055527e-46 |
| MsG0480023399.01 | MsG0780038587.01 | 0.863334 | 2.681465e-64 | 8.100199e-61 |
| MsG0480023467.01 | MsG0780038587.01 | 0.914833 | 1.204505e-84 | 3.053837e-80 |
| MsG0480023559.01 | MsG0780038587.01 | 0.921537 | 3.150075e-88 | 1.133853e-83 |
| MsG0480023726.01 | MsG0780038587.01 | 0.813347 | 2.679883e-51 | 1.745799e-48 |
| MsG0480023771.01 | MsG0780038587.01 | 0.870840 | 1.076366e-66 | 4.248394e-63 |
| MsG0580024084.01 | MsG0780038587.01 | 0.808784 | 2.612210e-50 | 1.507092e-47 |
| MsG0580024191.01 | MsG0780038587.01 | 0.808881 | 2.490396e-50 | 1.440506e-47 |
| MsG0580024369.01 | MsG0780038587.01 | 0.898539 | 4.803688e-77 | 5.702451e-73 |
| MsG0580024754.01 | MsG0780038587.01 | 0.813843 | 2.084193e-51 | 1.376072e-48 |
| MsG0580025400.01 | MsG0780038587.01 | 0.814569 | 1.441417e-51 | 9.706061e-49 |
| MsG0580025408.01 | MsG0780038587.01 | 0.816165 | 6.365988e-52 | 4.477246e-49 |
| MsG0380015027.01 | MsG0780038587.01 | 0.861407 | 1.048629e-63 | 2.964261e-60 |
| MsG0380015435.01 | MsG0780038587.01 | 0.809298 | 2.027588e-50 | 1.186039e-47 |
| MsG0380015512.01 | MsG0780038587.01 | 0.840195 | 1.006213e-57 | 1.422614e-54 |
| MsG0380015598.01 | MsG0780038587.01 | -0.801466 | 8.887870e-49 | 4.247381e-46 |
| MsG0380015818.01 | MsG0780038587.01 | 0.832739 | 7.959603e-56 | 8.976748e-53 |
| MsG0380015922.01 | MsG0780038587.01 | 0.805113 | 1.561483e-49 | 8.192303e-47 |
| MsG0380016067.01 | MsG0780038587.01 | 0.803151 | 3.997832e-49 | 1.994241e-46 |
| MsG0380016290.01 | MsG0780038587.01 | 0.850757 | 1.381401e-60 | 2.734325e-57 |
| MsG0380016389.01 | MsG0780038587.01 | 0.884036 | 2.702447e-71 | 1.755145e-67 |
| MsG0380016559.01 | MsG0780038587.01 | 0.824352 | 8.454738e-54 | 7.469964e-51 |
| MsG0380016560.01 | MsG0780038587.01 | 0.813301 | 2.743796e-51 | 1.785088e-48 |
| MsG0380016604.01 | MsG0780038587.01 | 0.833499 | 5.150738e-56 | 5.942370e-53 |
| MsG0380016733.01 | MsG0780038587.01 | 0.837093 | 6.369520e-57 | 8.186343e-54 |
| MsG0380016775.01 | MsG0780038587.01 | 0.848855 | 4.697982e-60 | 8.739194e-57 |
| MsG0380017382.01 | MsG0780038587.01 | 0.926593 | 3.790864e-91 | 1.804084e-86 |
| MsG0380017556.01 | MsG0780038587.01 | 0.857132 | 2.009649e-62 | 4.909407e-59 |
| MsG0480018084.01 | MsG0780038587.01 | 0.878932 | 1.881213e-69 | 1.000579e-65 |
| MsG0480018252.01 | MsG0780038587.01 | 0.813140 | 2.975407e-51 | 1.927249e-48 |
| MsG0580026157.01 | MsG0780038587.01 | 0.845319 | 4.375105e-59 | 7.263147e-56 |
| MsG0580026226.01 | MsG0780038587.01 | 0.824409 | 8.198222e-54 | 7.255027e-51 |
| MsG0580027043.01 | MsG0780038587.01 | 0.895809 | 6.733442e-76 | 7.090645e-72 |
| MsG0580029132.01 | MsG0780038587.01 | 0.944047 | 3.985152e-103 | 5.580260e-98 |
| MsG0580029283.01 | MsG0780038587.01 | 0.844512 | 7.219144e-59 | 1.168236e-55 |
| MsG0580029300.01 | MsG0780038587.01 | 0.872556 | 2.905507e-67 | 1.221276e-63 |
| MsG0580029370.01 | MsG0780038587.01 | 0.818443 | 1.955047e-52 | 1.463783e-49 |
| MsG0580029702.01 | MsG0780038587.01 | 0.800323 | 1.520931e-48 | 7.061469e-46 |
| MsG0580030003.01 | MsG0780038587.01 | 0.803711 | 3.059708e-49 | 1.548328e-46 |
| MsG0680030408.01 | MsG0780038587.01 | 0.808607 | 2.850723e-50 | 1.637082e-47 |
| MsG0280006741.01 | MsG0780038587.01 | 0.837926 | 3.896812e-57 | 5.138393e-54 |
| MsG0280006759.01 | MsG0780038587.01 | 0.811205 | 7.865926e-51 | 4.839140e-48 |
| MsG0280006819.01 | MsG0780038587.01 | 0.882796 | 7.710843e-71 | 4.764065e-67 |
| MsG0280006836.01 | MsG0780038587.01 | 0.837249 | 5.809869e-57 | 7.502391e-54 |
| MsG0280006993.01 | MsG0780038587.01 | 0.865489 | 5.688700e-65 | 1.854107e-61 |
| MsG0280007024.01 | MsG0780038587.01 | 0.837075 | 6.436738e-57 | 8.268234e-54 |
| MsG0280007161.01 | MsG0780038587.01 | 0.826331 | 2.876542e-54 | 2.689416e-51 |
| MsG0280007440.01 | MsG0780038587.01 | 0.804313 | 2.293525e-49 | 1.178751e-46 |
| MsG0280007634.01 | MsG0780038587.01 | 0.816433 | 5.544570e-52 | 3.928028e-49 |
| MsG0280007847.01 | MsG0780038587.01 | 0.832704 | 8.118511e-56 | 9.146828e-53 |
| MsG0280008118.01 | MsG0780038587.01 | 0.909540 | 5.085383e-82 | 9.943578e-78 |
| MsG0280008283.01 | MsG0780038587.01 | 0.816742 | 4.727993e-52 | 3.378098e-49 |
| MsG0280008327.01 | MsG0780038587.01 | 0.832899 | 7.263733e-56 | 8.231089e-53 |
| MsG0280009141.01 | MsG0780038587.01 | 0.847608 | 1.038451e-59 | 1.855773e-56 |
| MsG0280009230.01 | MsG0780038587.01 | 0.801591 | 8.377348e-49 | 4.016047e-46 |
| MsG0280009372.01 | MsG0780038587.01 | 0.802585 | 5.231596e-49 | 2.572296e-46 |
| MsG0280009375.01 | MsG0780038587.01 | 0.929850 | 3.843866e-93 | 2.196122e-88 |
| MsG0280009575.01 | MsG0780038587.01 | 0.820714 | 5.928370e-53 | 4.726729e-50 |
| MsG0280009591.01 | MsG0780038587.01 | 0.820209 | 7.741471e-53 | 6.086693e-50 |
| MsG0280010002.01 | MsG0780038587.01 | 0.822915 | 1.834316e-53 | 1.556332e-50 |
| MsG0280010258.01 | MsG0780038587.01 | 0.850694 | 1.438922e-60 | 2.842163e-57 |
| MsG0280010383.01 | MsG0780038587.01 | 0.809877 | 1.522394e-50 | 9.043015e-48 |
| MsG0280010495.01 | MsG0780038587.01 | 0.886651 | 2.840068e-72 | 2.046464e-68 |
| MsG0280010525.01 | MsG0780038587.01 | 0.842761 | 2.123069e-58 | 3.251309e-55 |
| MsG0680035848.01 | MsG0780038587.01 | 0.924308 | 8.380835e-90 | 3.514386e-85 |
| MsG0680035854.01 | MsG0780038587.01 | 0.838326 | 3.073373e-57 | 4.102036e-54 |
| MsG0680035888.01 | MsG0780038587.01 | 0.813491 | 2.492067e-51 | 1.629840e-48 |
| MsG0780036240.01 | MsG0780038587.01 | 0.904702 | 9.311568e-80 | 1.457645e-75 |
| MsG0780036547.01 | MsG0780038587.01 | 0.813993 | 1.931511e-51 | 1.280461e-48 |
| MsG0780036822.01 | MsG0780038587.01 | 0.860829 | 1.572380e-63 | 4.356168e-60 |
| MsG0780037240.01 | MsG0780038587.01 | 0.821522 | 3.861058e-53 | 3.148447e-50 |
| MsG0780037590.01 | MsG0780038587.01 | -0.819195 | 1.319388e-52 | 1.008434e-49 |
| MsG0780038400.01 | MsG0780038587.01 | 0.923551 | 2.287969e-89 | 9.214598e-85 |
| MsG0780038587.01 | MsG0780038645.01 | 0.833457 | 5.275196e-56 | 6.078468e-53 |
| MsG0780038587.01 | MsG0780039271.01 | 0.859657 | 3.553120e-63 | 9.455268e-60 |
| MsG0780038587.01 | MsG0780039340.01 | 0.838929 | 2.147218e-57 | 2.919307e-54 |
| MsG0780038587.01 | MsG0780039643.01 | 0.829697 | 4.451504e-55 | 4.591071e-52 |
| MsG0780038587.01 | MsG0780039844.01 | 0.804322 | 2.283848e-49 | 1.174040e-46 |
| MsG0780038587.01 | MsG0780039848.01 | 0.839041 | 2.008029e-57 | 2.739359e-54 |
| MsG0780038587.01 | MsG0780039943.01 | 0.800938 | 1.139640e-48 | 5.374357e-46 |
| MsG0780038587.01 | MsG0780040070.01 | 0.805278 | 1.442101e-49 | 7.597873e-47 |
| MsG0780038587.01 | MsG0780040338.01 | 0.870676 | 1.218482e-66 | 4.780154e-63 |
| MsG0780038587.01 | MsG0780040511.01 | 0.855191 | 7.442494e-62 | 1.704021e-58 |
| MsG0780038587.01 | MsG0780040718.01 | 0.824995 | 5.967001e-54 | 5.370911e-51 |
| MsG0780038587.01 | MsG0780040782.01 | 0.817681 | 2.906865e-52 | 2.131040e-49 |
| MsG0780038587.01 | MsG0780040900.01 | 0.830742 | 2.474866e-55 | 2.630876e-52 |
| MsG0780038587.01 | MsG0780041147.01 | 0.869972 | 2.072901e-66 | 7.929010e-63 |
| MsG0780038587.01 | MsG0780041209.01 | 0.801175 | 1.019312e-48 | 4.835716e-46 |
| MsG0780038587.01 | MsG0780041223.01 | 0.915887 | 3.447134e-85 | 9.218586e-81 |
| MsG0780038587.01 | MsG0780041224.01 | 0.845861 | 3.117569e-59 | 5.267419e-56 |
| MsG0780038587.01 | MsG0780041295.01 | 0.871175 | 8.346928e-67 | 3.334472e-63 |
| MsG0780038587.01 | MsG0780041423.01 | 0.804413 | 2.186620e-49 | 1.126656e-46 |
| MsG0780038587.01 | MsG0780041462.01 | 0.868137 | 8.163519e-66 | 2.921447e-62 |
| MsG0780038587.01 | MsG0780041490.01 | 0.821468 | 3.973239e-53 | 3.235037e-50 |
| MsG0780038587.01 | MsG0780041519.01 | 0.847235 | 1.314382e-59 | 2.321073e-56 |
| MsG0780038587.01 | MsG0880041967.01 | 0.824540 | 7.637439e-54 | 6.784975e-51 |
| MsG0780038587.01 | MsG0880042125.01 | 0.864559 | 1.114315e-64 | 3.513367e-61 |
| MsG0780038587.01 | MsG0880042128.01 | 0.824194 | 9.212895e-54 | 8.103616e-51 |
| MsG0780038587.01 | MsG0880042519.01 | 0.838393 | 2.953967e-57 | 3.951002e-54 |
| MsG0780038587.01 | MsG0880042604.01 | 0.818330 | 2.074125e-52 | 1.547944e-49 |
| MsG0780038587.01 | MsG0880042848.01 | 0.822757 | 1.997253e-53 | 1.687047e-50 |
| MsG0780038587.01 | MsG0880042991.01 | 0.835252 | 1.869768e-56 | 2.273950e-53 |
| MsG0780038587.01 | MsG0880043517.01 | 0.827337 | 1.653903e-54 | 1.592189e-51 |
| MsG0780038587.01 | MsG0880043592.01 | 0.805402 | 1.358505e-49 | 7.180569e-47 |
| MsG0780038587.01 | MsG0880043770.01 | 0.909371 | 6.134924e-82 | 1.189383e-77 |
| MsG0780038587.01 | MsG0880045072.01 | 0.814982 | 1.167343e-51 | 7.948526e-49 |
| MsG0780038587.01 | MsG0880045619.01 | 0.800521 | 1.386220e-48 | 6.468154e-46 |
| MsG0780038587.01 | MsG0880045631.01 | 0.803656 | 3.140960e-49 | 1.587247e-46 |
| MsG0780038587.01 | MsG0880045656.01 | 0.841276 | 5.242106e-58 | 7.663090e-55 |
| MsG0780038587.01 | MsG0880046068.01 | 0.800046 | 1.731701e-48 | 7.983386e-46 |
| MsG0780038587.01 | MsG0880046074.01 | 0.806515 | 7.925177e-50 | 4.309978e-47 |
| MsG0780038587.01 | MsG0880046177.01 | 0.922572 | 8.255011e-89 | 3.145731e-84 |
| MsG0780038587.01 | MsG0880046253.01 | 0.819311 | 1.241605e-52 | 9.519921e-50 |
| MsG0780038587.01 | MsG0880046444.01 | 0.893029 | 9.188908e-75 | 8.610081e-71 |
| MsG0780038587.01 | MsG0880046575.01 | 0.828458 | 8.889317e-55 | 8.841256e-52 |
| MsG0780038587.01 | MsG0880046879.01 | 0.861770 | 8.125015e-64 | 2.324438e-60 |
| MsG0780038587.01 | MsG0880046933.01 | 0.881073 | 3.248343e-70 | 1.876047e-66 |
| MsG0780038587.01 | MsG0880047082.01 | 0.800721 | 1.261815e-48 | 5.917522e-46 |
| MsG0780038587.01 | MsG0880047388.01 | 0.849685 | 2.759051e-60 | 5.272864e-57 |
| MsG0780038587.01 | MsG0880047427.01 | 0.841080 | 5.902091e-58 | 8.574831e-55 |
| MsG0780038587.01 | MsG0880047428.01 | 0.842620 | 2.313083e-58 | 3.526981e-55 |
| MsG0780038587.01 | MsG0880047607.01 | 0.835145 | 1.990082e-56 | 2.412103e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038587.01.T02 | MTR_7g057770 | 100.000 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 1.04e-93 | 269 |
| MsG0780038587.01.T02 | MTR_1g023590 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 7.07e-93 | 267 |
| MsG0780038587.01.T02 | MTR_5g083790 | 96.154 | 130 | 5 | 0 | 1 | 130 | 1 | 130 | 1.42e-90 | 261 |
| MsG0780038587.01.T01 | MTR_7g057770 | 99.301 | 143 | 1 | 0 | 1 | 143 | 1 | 143 | 4.82e-103 | 295 |
| MsG0780038587.01.T01 | MTR_1g023590 | 98.601 | 143 | 2 | 0 | 1 | 143 | 1 | 143 | 9.08e-102 | 291 |
| MsG0780038587.01.T01 | MTR_5g083790 | 95.105 | 143 | 7 | 0 | 1 | 143 | 1 | 143 | 7.34e-99 | 284 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038587.01.T02 | AT5G48760 | 92.308 | 130 | 10 | 0 | 1 | 130 | 1 | 130 | 3.27e-88 | 255 |
| MsG0780038587.01.T02 | AT5G48760 | 92.308 | 130 | 10 | 0 | 1 | 130 | 1 | 130 | 3.27e-88 | 255 |
| MsG0780038587.01.T02 | AT3G24830 | 90.000 | 130 | 13 | 0 | 1 | 130 | 1 | 130 | 2.74e-87 | 253 |
| MsG0780038587.01.T02 | AT4G13170 | 91.538 | 130 | 11 | 0 | 1 | 130 | 1 | 130 | 5.12e-87 | 252 |
| MsG0780038587.01.T02 | AT3G07110 | 90.000 | 130 | 13 | 0 | 1 | 130 | 1 | 130 | 1.73e-86 | 251 |
| MsG0780038587.01.T02 | AT3G07110 | 90.000 | 130 | 13 | 0 | 1 | 130 | 1 | 130 | 1.91e-86 | 251 |
| MsG0780038587.01.T01 | AT5G48760 | 91.608 | 143 | 12 | 0 | 1 | 143 | 1 | 143 | 3.47e-96 | 278 |
| MsG0780038587.01.T01 | AT5G48760 | 91.608 | 143 | 12 | 0 | 1 | 143 | 1 | 143 | 3.47e-96 | 278 |
| MsG0780038587.01.T01 | AT3G24830 | 89.510 | 143 | 15 | 0 | 1 | 143 | 1 | 143 | 2.34e-95 | 275 |
| MsG0780038587.01.T01 | AT4G13170 | 90.909 | 143 | 13 | 0 | 1 | 143 | 1 | 143 | 3.82e-95 | 275 |
| MsG0780038587.01.T01 | AT3G07110 | 89.510 | 143 | 15 | 0 | 1 | 143 | 1 | 143 | 1.56e-94 | 273 |
| MsG0780038587.01.T01 | AT3G07110 | 89.510 | 143 | 15 | 0 | 1 | 143 | 1 | 143 | 1.70e-94 | 273 |
Find 53 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTGTAACGTCATATATT+TGG | 0.237290 | 7:-49260064 | MsG0780038587.01.T01:three_prime_UTR |
| TTGATAGTGTGTTGGCTCTT+TGG | 0.265631 | 7:-49260083 | MsG0780038587.01.T01:three_prime_UTR |
| ATTCCATTTCAGTTCAGTTT+TGG | 0.300578 | 7:-49260198 | MsG0780038587.01.T01:three_prime_UTR |
| GCGATCGAAGCAATAATATA+AGG | 0.320161 | 7:-49259881 | MsG0780038587.01.T01:three_prime_UTR |
| CTTCGATCGCTTGAATTTCA+AGG | 0.330356 | 7:+49259894 | None:intergenic |
| CGACCAAAACTGAACTGAAA+TGG | 0.364424 | 7:+49260195 | None:intergenic |
| TAACACAAAGATTCATAGTA+TGG | 0.370640 | 7:+49260024 | None:intergenic |
| GGTCGTTATTTAATGTTTGT+TGG | 0.383334 | 7:-49260177 | MsG0780038587.01.T01:three_prime_UTR |
| ACCAAAATAACTCACCTTGA+TGG | 0.392748 | 7:+49260491 | None:intergenic |
| CATATATTTGGATTTGTTTG+TGG | 0.404205 | 7:-49260052 | MsG0780038587.01.T01:three_prime_UTR |
| TAGGGTGTTGAGGCTTCAAA+AGG | 0.434306 | 7:-49260573 | MsG0780038587.01.T01:CDS |
| AAATACTACTCAGTACTTAA+CGG | 0.437826 | 7:+49260263 | None:intergenic |
| GTGGAGAGGCGGCACTTGCC+AGG | 0.444845 | 7:-49260747 | MsG0780038587.01.T01:CDS |
| CTCCATATGACAAAATTAAG+AGG | 0.448931 | 7:-49260699 | MsG0780038587.01.T01:CDS |
| TACTCTAGAAATGACAATCT+TGG | 0.450998 | 7:-49260154 | MsG0780038587.01.T01:three_prime_UTR |
| TGCCAGGATGAAGGTGTATG+AGG | 0.452984 | 7:-49260731 | MsG0780038587.01.T01:CDS |
| AATACTACTCAGTACTTAAC+GGG | 0.453354 | 7:+49260264 | None:intergenic |
| CGGGAGCAAGAATTTCAAGT+TGG | 0.456903 | 7:+49260283 | None:intergenic |
| GGGAGCAAGAATTTCAAGTT+GGG | 0.464166 | 7:+49260284 | None:intergenic |
| AGAAGCAGATCAATAAATTG+AGG | 0.485847 | 7:-49260344 | MsG0780038587.01.T01:exon |
| AATACTTACTTAAGAGCATC+GGG | 0.507877 | 7:+49260667 | None:intergenic |
| GGCGGCACTTGCCAGGATGA+AGG | 0.510750 | 7:-49260740 | MsG0780038587.01.T01:CDS |
| AATTGTCCGCAGAGGTTGGA+TGG | 0.512881 | 7:-49260527 | MsG0780038587.01.T01:CDS |
| TCTCCACGCTTTGTCTTGTG+TGG | 0.517762 | 7:+49260763 | None:intergenic |
| TTGTGTCCGTCTTAATACTC+TGG | 0.520113 | 7:-49259931 | MsG0780038587.01.T01:three_prime_UTR |
| TGGAGACAAAGAGGAAGGAA+AGG | 0.523797 | 7:-49260389 | MsG0780038587.01.T01:CDS |
| GAAGCAGATCAATAAATTGA+GGG | 0.524740 | 7:-49260343 | MsG0780038587.01.T01:exon |
| TGTGTATGTAAGATGCATAT+AGG | 0.525574 | 7:-49259965 | MsG0780038587.01.T01:three_prime_UTR |
| CAATACTTACTTAAGAGCAT+CGG | 0.537113 | 7:+49260666 | None:intergenic |
| GGACAATTGTCCGCAGAGGT+TGG | 0.541294 | 7:-49260531 | MsG0780038587.01.T01:CDS |
| ATAACTCACCTTGATGGTGC+CGG | 0.561236 | 7:+49260497 | None:intergenic |
| ACCCTCATACACCTTCATCC+TGG | 0.561860 | 7:+49260729 | None:intergenic |
| TGGTTGAAATTAGGGTGTTG+AGG | 0.577187 | 7:-49260583 | MsG0780038587.01.T01:intron |
| GAACTACGCCGGCACCATCA+AGG | 0.577844 | 7:-49260505 | MsG0780038587.01.T01:intron |
| CAAGACAAAGCGTGGAGAGG+CGG | 0.579684 | 7:-49260758 | MsG0780038587.01.T01:CDS |
| AACAGGAGCTGGAGACAAAG+AGG | 0.580730 | 7:-49260398 | MsG0780038587.01.T01:intron |
| ATATGACAAAATTAAGAGGA+TGG | 0.585968 | 7:-49260695 | MsG0780038587.01.T01:CDS |
| GCCAGGATGAAGGTGTATGA+GGG | 0.597406 | 7:-49260730 | MsG0780038587.01.T01:CDS |
| GGAGACAAAGAGGAAGGAAA+GGG | 0.597942 | 7:-49260388 | MsG0780038587.01.T01:CDS |
| CACAATATTCAGTCTCCTAG+AGG | 0.611494 | 7:+49259984 | None:intergenic |
| GAAGCAATAATATAAGGCTG+AGG | 0.614680 | 7:-49259875 | MsG0780038587.01.T01:three_prime_UTR |
| GGGACACAAATACTGCACCT+TGG | 0.616368 | 7:-49260552 | MsG0780038587.01.T01:CDS |
| AGGGTGTTGAGGCTTCAAAA+GGG | 0.617854 | 7:-49260572 | MsG0780038587.01.T01:CDS |
| GGAGCTGGAGACAAAGAGGA+AGG | 0.618380 | 7:-49260394 | MsG0780038587.01.T01:CDS |
| ATTCCACACAAGACAAAGCG+TGG | 0.632644 | 7:-49260766 | MsG0780038587.01.T01:CDS |
| GGAGCAAGAATTTCAAGTTG+GGG | 0.639957 | 7:+49260285 | None:intergenic |
| TCAGCACCAGAGTATTAAGA+CGG | 0.655699 | 7:+49259925 | None:intergenic |
| CCTCTGCGGACAATTGTCCA+AGG | 0.658974 | 7:+49260535 | None:intergenic |
| ACACAAGACAAAGCGTGGAG+AGG | 0.661685 | 7:-49260761 | MsG0780038587.01.T01:CDS |
| CCTTGGACAATTGTCCGCAG+AGG | 0.672294 | 7:-49260535 | MsG0780038587.01.T01:CDS |
| AGAGTATTAAGACGGACACA+AGG | 0.673254 | 7:+49259933 | None:intergenic |
| GAGGTTGGATGGAACTACGC+CGG | 0.675697 | 7:-49260516 | MsG0780038587.01.T01:CDS |
| GTAGTTCCATCCAACCTCTG+CGG | 0.754715 | 7:+49260521 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAGAATTTTTATTGAAT+TGG | - | Chr7:49261094-49261113 | MsG0780038587.01.T01:intron | 10.0% |
| !! | TATTGTTTAATGTTTGTAAT+TGG | - | Chr7:49260412-49260431 | MsG0780038587.01.T01:intron | 15.0% |
| !! | TTGTATTTGATAAATAACAG+CGG | - | Chr7:49261271-49261290 | MsG0780038587.01.T01:intron | 20.0% |
| !! | TTTAATGTTTGTAATTGGTT+TGG | - | Chr7:49260417-49260436 | MsG0780038587.01.T01:intron | 20.0% |
| !!! | TTAATTCATTAATCGCATTT+TGG | - | Chr7:49260296-49260315 | MsG0780038587.01.T01:three_prime_UTR | 20.0% |
| !!! | TTAATTTTTCTCTTGTTAAC+AGG | - | Chr7:49261304-49261323 | MsG0780038587.01.T01:intron | 20.0% |
| !!! | TTAGTTTTTGTGTTGTTTTT+TGG | - | Chr7:49260542-49260561 | MsG0780038587.01.T01:CDS | 20.0% |
| !!! | TTTTTGTTAAATCGCATTTT+TGG | - | Chr7:49260213-49260232 | MsG0780038587.01.T01:three_prime_UTR | 20.0% |
| ! | AAATACTACTCAGTACTTAA+CGG | + | Chr7:49261459-49261478 | None:intergenic | 25.0% |
| ! | ATATGACAAAATTAAGAGGA+TGG | - | Chr7:49261024-49261043 | MsG0780038587.01.T01:intron | 25.0% |
| ! | TAACACAAAGATTCATAGTA+TGG | + | Chr7:49261698-49261717 | None:intergenic | 25.0% |
| ! | TGAAGTATATGAGATTTCTT+AGG | - | Chr7:49260077-49260096 | MsG0780038587.01.T01:three_prime_UTR | 25.0% |
| ! | TTGATTATTGTGTTCTTTGT+TGG | - | Chr7:49260657-49260676 | MsG0780038587.01.T01:intron | 25.0% |
| !! | ATCCTCTTAATTTTGTCATA+TGG | + | Chr7:49261025-49261044 | None:intergenic | 25.0% |
| !! | ATCGCATTTTGGATATTATT+AGG | - | Chr7:49260307-49260326 | MsG0780038587.01.T01:three_prime_UTR | 25.0% |
| !! | CATATATTTGGATTTGTTTG+TGG | - | Chr7:49261667-49261686 | MsG0780038587.01.T01:CDS | 25.0% |
| !! | GTGTTGTTGAATATTGTATT+TGG | - | Chr7:49260578-49260597 | MsG0780038587.01.T01:intron | 25.0% |
| !! | TTGTTTAAGGATAGTTGTTT+TGG | - | Chr7:49260458-49260477 | MsG0780038587.01.T01:intron | 25.0% |
| !!! | ATATTACTAGGTTGTTGTTT+TGG | - | Chr7:49260236-49260255 | MsG0780038587.01.T01:three_prime_UTR | 25.0% |
| !!! | ATTACTTTTTGATAGTGTGT+TGG | - | Chr7:49261628-49261647 | MsG0780038587.01.T01:CDS | 25.0% |
| !!! | TGTTTAAGGATAGTTGTTTT+GGG | - | Chr7:49260459-49260478 | MsG0780038587.01.T01:intron | 25.0% |
| !!! | TTTTAACGTGGATTTGTTTA+AGG | - | Chr7:49260445-49260464 | MsG0780038587.01.T01:intron | 25.0% |
| !!! | TTTTTGAGTAGTAATGTTGT+TGG | - | Chr7:49260735-49260754 | MsG0780038587.01.T01:CDS | 25.0% |
| AATACTACTCAGTACTTAAC+GGG | + | Chr7:49261458-49261477 | None:intergenic | 30.0% | |
| AGAAGCAGATCAATAAATTG+AGG | - | Chr7:49261375-49261394 | MsG0780038587.01.T01:intron | 30.0% | |
| ATATGAGATTTCTTAGGAAG+AGG | - | Chr7:49260083-49260102 | MsG0780038587.01.T01:three_prime_UTR | 30.0% | |
| ATTATTGTGTTCTTTGTTGG+AGG | - | Chr7:49260660-49260679 | MsG0780038587.01.T01:intron | 30.0% | |
| CTCCATATGACAAAATTAAG+AGG | - | Chr7:49261020-49261039 | MsG0780038587.01.T01:intron | 30.0% | |
| GAAGCAGATCAATAAATTGA+GGG | - | Chr7:49261376-49261395 | MsG0780038587.01.T01:intron | 30.0% | |
| GAATTTGAATACTGAATGAG+TGG | - | Chr7:49261116-49261135 | MsG0780038587.01.T01:intron | 30.0% | |
| GGTCGTTATTTAATGTTTGT+TGG | - | Chr7:49261542-49261561 | MsG0780038587.01.T01:intron | 30.0% | |
| TGAATGAGTGGTTGAAATTA+GGG | - | Chr7:49261128-49261147 | MsG0780038587.01.T01:intron | 30.0% | |
| TGTGTATGTAAGATGCATAT+AGG | - | Chr7:49261754-49261773 | MsG0780038587.01.T01:CDS | 30.0% | |
| TTATTGTGTTCTTTGTTGGA+GGG | - | Chr7:49260661-49260680 | MsG0780038587.01.T01:intron | 30.0% | |
| TTGGTGTAACGTCATATATT+TGG | - | Chr7:49261655-49261674 | MsG0780038587.01.T01:CDS | 30.0% | |
| ! | ACTGCGTTTTTGATATTACT+AGG | - | Chr7:49260265-49260284 | MsG0780038587.01.T01:three_prime_UTR | 30.0% |
| ! | ATTCCATTTCAGTTCAGTTT+TGG | - | Chr7:49261521-49261540 | MsG0780038587.01.T01:intron | 30.0% |
| ! | CAATACTTACTTAAGAGCAT+CGG | + | Chr7:49261056-49261075 | None:intergenic | 30.0% |
| ! | CTCTTAATTTTGTCATATGG+AGG | + | Chr7:49261022-49261041 | None:intergenic | 30.0% |
| ! | TACTCTAGAAATGACAATCT+TGG | - | Chr7:49261565-49261584 | MsG0780038587.01.T01:CDS | 30.0% |
| ! | TCATGGTCCTATTCATTTTA+GGG | - | Chr7:49260123-49260142 | MsG0780038587.01.T01:three_prime_UTR | 30.0% |
| ! | TTAATTTTGTCATATGGAGG+TGG | + | Chr7:49261019-49261038 | None:intergenic | 30.0% |
| !! | AATACTTACTTAAGAGCATC+GGG | + | Chr7:49261055-49261074 | None:intergenic | 30.0% |
| !! | TCGCATTTTTGGATATTACT+AGG | - | Chr7:49260224-49260243 | MsG0780038587.01.T01:three_prime_UTR | 30.0% |
| !! | TGAGTGATGTGTTATTGTTT+TGG | - | Chr7:49260893-49260912 | MsG0780038587.01.T01:intron | 30.0% |
| !!! | AGAAATGTTGTGCTGTTTTT+TGG | - | Chr7:49260614-49260633 | MsG0780038587.01.T01:intron | 30.0% |
| !!! | GGTTTGGTTATTTTTTAACG+TGG | - | Chr7:49260433-49260452 | MsG0780038587.01.T01:intron | 30.0% |
| AAATGAATAGGACCATGAGA+AGG | + | Chr7:49260121-49260140 | None:intergenic | 35.0% | |
| ACCAAAATAACTCACCTTGA+TGG | + | Chr7:49261231-49261250 | None:intergenic | 35.0% | |
| AGAAGAAGATCGAGCAAAAA+TGG | - | Chr7:49259889-49259908 | MsG0780038587.01.T01:three_prime_UTR | 35.0% | |
| CTGAATGAGTGGTTGAAATT+AGG | - | Chr7:49261127-49261146 | MsG0780038587.01.T01:intron | 35.0% | |
| GAAGCAATAATATAAGGCTG+AGG | - | Chr7:49261844-49261863 | MsG0780038587.01.T01:five_prime_UTR | 35.0% | |
| GATCTTCTTCTTCTTCTTTG+TGG | + | Chr7:49259880-49259899 | None:intergenic | 35.0% | |
| GCGATCGAAGCAATAATATA+AGG | - | Chr7:49261838-49261857 | MsG0780038587.01.T01:five_prime_UTR | 35.0% | |
| ! | ACCATCAAGGTGAGTTATTT+TGG | - | Chr7:49261227-49261246 | MsG0780038587.01.T01:intron | 35.0% |
| ! | CTCATGGTCCTATTCATTTT+AGG | - | Chr7:49260122-49260141 | MsG0780038587.01.T01:three_prime_UTR | 35.0% |
| !! | CTTTTGTGGATGATTTTGAC+AGG | - | Chr7:49260777-49260796 | MsG0780038587.01.T01:intron | 35.0% |
| !! | TTGAGTGTTGTGTTCTTTTG+TGG | - | Chr7:49260763-49260782 | MsG0780038587.01.T01:CDS | 35.0% |
| !! | TTTCGATTGATTTTGCCTCT+AGG | - | Chr7:49261720-49261739 | MsG0780038587.01.T01:CDS | 35.0% |
| !!! | AGTGTTGTGTTGTTTTTGGA+GGG | - | Chr7:49260712-49260731 | MsG0780038587.01.T01:CDS | 35.0% |
| !!! | TGTGAGTGTTGTGTTGTTTT+TGG | - | Chr7:49260708-49260727 | MsG0780038587.01.T01:CDS | 35.0% |
| !!! | TTAAGGATAGTTGTTTTGGG+AGG | - | Chr7:49260462-49260481 | MsG0780038587.01.T01:intron | 35.0% |
| AGTACGCCAAAAGATCTTAC+TGG | + | Chr7:49260152-49260171 | None:intergenic | 40.0% | |
| ATGAACACAAAGCCTTCTCA+TGG | - | Chr7:49260106-49260125 | MsG0780038587.01.T01:three_prime_UTR | 40.0% | |
| CACAATATTCAGTCTCCTAG+AGG | + | Chr7:49261738-49261757 | None:intergenic | 40.0% | |
| CGACCAAAACTGAACTGAAA+TGG | + | Chr7:49261527-49261546 | None:intergenic | 40.0% | |
| CTTCGATCGCTTGAATTTCA+AGG | + | Chr7:49261828-49261847 | None:intergenic | 40.0% | |
| GTACGCCAAAAGATCTTACT+GGG | + | Chr7:49260151-49260170 | None:intergenic | 40.0% | |
| TCTTCTTCTTCTTTGTGGCT+CGG | + | Chr7:49259875-49259894 | None:intergenic | 40.0% | |
| TGTGAAGAGATTTGTGCTTC+TGG | - | Chr7:49260034-49260053 | MsG0780038587.01.T01:three_prime_UTR | 40.0% | |
| TTGTGTCCGTCTTAATACTC+TGG | - | Chr7:49261788-49261807 | MsG0780038587.01.T01:CDS | 40.0% | |
| TTTCTCTTGTTAACAGGAGC+TGG | - | Chr7:49261310-49261329 | MsG0780038587.01.T01:intron | 40.0% | |
| ! | AGAGTATTAAGACGGACACA+AGG | + | Chr7:49261789-49261808 | None:intergenic | 40.0% |
| ! | TCAGCACCAGAGTATTAAGA+CGG | + | Chr7:49261797-49261816 | None:intergenic | 40.0% |
| !! | GAGTGTTGTCTTTTGAGAAG+TGG | - | Chr7:49260816-49260835 | MsG0780038587.01.T01:intron | 40.0% |
| !! | GGAGCAAGAATTTCAAGTTG+GGG | + | Chr7:49261437-49261456 | None:intergenic | 40.0% |
| !! | GGGAGCAAGAATTTCAAGTT+GGG | + | Chr7:49261438-49261457 | None:intergenic | 40.0% |
| !! | TGGTTGAAATTAGGGTGTTG+AGG | - | Chr7:49261136-49261155 | MsG0780038587.01.T01:intron | 40.0% |
| !! | TTGAGTGTCGTGTTCTCTTT+TGG | - | Chr7:49260844-49260863 | MsG0780038587.01.T01:intron | 40.0% |
| !! | TTGATAGTGTGTTGGCTCTT+TGG | - | Chr7:49261636-49261655 | MsG0780038587.01.T01:CDS | 40.0% |
| !!! | GAGTGTTGTGTTGTTTTTGG+AGG | - | Chr7:49260711-49260730 | MsG0780038587.01.T01:CDS | 40.0% |
| ATTCCACACAAGACAAAGCG+TGG | - | Chr7:49260953-49260972 | MsG0780038587.01.T01:intron | 45.0% | |
| CTGGGAGCCCTAAAATGAAT+AGG | + | Chr7:49260133-49260152 | None:intergenic | 45.0% | |
| GAAGAGATTTGTGCTTCTGG+TGG | - | Chr7:49260037-49260056 | MsG0780038587.01.T01:three_prime_UTR | 45.0% | |
| GATCGAGCAAAAATGGTGTC+TGG | - | Chr7:49259896-49259915 | MsG0780038587.01.T01:three_prime_UTR | 45.0% | |
| GGAGACAAAGAGGAAGGAAA+GGG | - | Chr7:49261331-49261350 | MsG0780038587.01.T01:intron | 45.0% | |
| GTTGCAAAGGAGCTTCTCAA+TGG | - | Chr7:49259989-49260008 | MsG0780038587.01.T01:three_prime_UTR | 45.0% | |
| TGGAGACAAAGAGGAAGGAA+AGG | - | Chr7:49261330-49261349 | MsG0780038587.01.T01:intron | 45.0% | |
| TTCAGGTATCTGCGCAAAGA+GGG | - | Chr7:49259919-49259938 | MsG0780038587.01.T01:three_prime_UTR | 45.0% | |
| ! | ATCTTTTGGCGTACTGTTCG+TGG | - | Chr7:49260157-49260176 | MsG0780038587.01.T01:three_prime_UTR | 45.0% |
| ! | CGGGAGCAAGAATTTCAAGT+TGG | + | Chr7:49261439-49261458 | None:intergenic | 45.0% |
| ! | GCAAAAATGGTGTCTGGTTC+AGG | - | Chr7:49259902-49259921 | MsG0780038587.01.T01:three_prime_UTR | 45.0% |
| ! | TCTTTTGGCGTACTGTTCGT+GGG | - | Chr7:49260158-49260177 | MsG0780038587.01.T01:three_prime_UTR | 45.0% |
| !! | AGGGTGTTGAGGCTTCAAAA+GGG | - | Chr7:49261147-49261166 | MsG0780038587.01.T01:intron | 45.0% |
| !! | ATAACTCACCTTGATGGTGC+CGG | + | Chr7:49261225-49261244 | None:intergenic | 45.0% |
| !! | TAGGGTGTTGAGGCTTCAAA+AGG | - | Chr7:49261146-49261165 | MsG0780038587.01.T01:intron | 45.0% |
| AACAGGAGCTGGAGACAAAG+AGG | - | Chr7:49261321-49261340 | MsG0780038587.01.T01:intron | 50.0% | |
| AAGCTCCTTTGCAACGATGG+AGG | + | Chr7:49259984-49260003 | None:intergenic | 50.0% | |
| AATTGTCCGCAGAGGTTGGA+TGG | - | Chr7:49261192-49261211 | MsG0780038587.01.T01:intron | 50.0% | |
| ACACAAGACAAAGCGTGGAG+AGG | - | Chr7:49260958-49260977 | MsG0780038587.01.T01:intron | 50.0% | |
| ACCCTCATACACCTTCATCC+TGG | + | Chr7:49260993-49261012 | None:intergenic | 50.0% | |
| ACTTGCCTCCATCGTTGCAA+AGG | - | Chr7:49259976-49259995 | MsG0780038587.01.T01:three_prime_UTR | 50.0% | |
| AGGCAAGTCTACCTAGCATG+TGG | + | Chr7:49259964-49259983 | None:intergenic | 50.0% | |
| GAGAAGCTCCTTTGCAACGA+TGG | + | Chr7:49259987-49260006 | None:intergenic | 50.0% | |
| GGAGCTTCTCAATGGACAGA+AGG | - | Chr7:49259997-49260016 | MsG0780038587.01.T01:three_prime_UTR | 50.0% | |
| GGGACACAAATACTGCACCT+TGG | - | Chr7:49261167-49261186 | MsG0780038587.01.T01:intron | 50.0% | |
| GTAGTTCCATCCAACCTCTG+CGG | + | Chr7:49261201-49261220 | None:intergenic | 50.0% | |
| GTTCAGGTATCTGCGCAAAG+AGG | - | Chr7:49259918-49259937 | MsG0780038587.01.T01:three_prime_UTR | 50.0% | |
| TCTCCACGCTTTGTCTTGTG+TGG | + | Chr7:49260959-49260978 | None:intergenic | 50.0% | |
| ! | GCCAGGATGAAGGTGTATGA+GGG | - | Chr7:49260989-49261008 | MsG0780038587.01.T01:intron | 50.0% |
| ! | GGGCTCCCAGTAAGATCTTT+TGG | - | Chr7:49260143-49260162 | MsG0780038587.01.T01:three_prime_UTR | 50.0% |
| ! | TGCCAGGATGAAGGTGTATG+AGG | - | Chr7:49260988-49261007 | MsG0780038587.01.T01:intron | 50.0% |
| !! | GTGCTTCTGGTGGTCTTGTT+AGG | - | Chr7:49260047-49260066 | MsG0780038587.01.T01:three_prime_UTR | 50.0% |
| AGAGGGTGGTGATCGATGCA+AGG | - | Chr7:49259936-49259955 | MsG0780038587.01.T01:three_prime_UTR | 55.0% | |
| AGGTATCTGCGCAAAGAGGG+TGG | - | Chr7:49259922-49259941 | MsG0780038587.01.T01:three_prime_UTR | 55.0% | |
| CAAGACAAAGCGTGGAGAGG+CGG | - | Chr7:49260961-49260980 | MsG0780038587.01.T01:intron | 55.0% | |
| CCTCTGCGGACAATTGTCCA+AGG | + | Chr7:49261187-49261206 | None:intergenic | 55.0% | |
| CCTTGGACAATTGTCCGCAG+AGG | - | Chr7:49261184-49261203 | MsG0780038587.01.T01:intron | 55.0% | |
| GAGGTTGGATGGAACTACGC+CGG | - | Chr7:49261203-49261222 | MsG0780038587.01.T01:intron | 55.0% | |
| GGACAATTGTCCGCAGAGGT+TGG | - | Chr7:49261188-49261207 | MsG0780038587.01.T01:intron | 55.0% | |
| GGAGCTGGAGACAAAGAGGA+AGG | - | Chr7:49261325-49261344 | MsG0780038587.01.T01:intron | 55.0% | |
| ! | GATGCAAGGCACCACATGCT+AGG | - | Chr7:49259950-49259969 | MsG0780038587.01.T01:three_prime_UTR | 55.0% |
| GAACTACGCCGGCACCATCA+AGG | - | Chr7:49261214-49261233 | MsG0780038587.01.T01:intron | 60.0% | |
| GGCGGCACTTGCCAGGATGA+AGG | - | Chr7:49260979-49260998 | MsG0780038587.01.T01:intron | 65.0% | |
| GTGGAGAGGCGGCACTTGCC+AGG | - | Chr7:49260972-49260991 | MsG0780038587.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 49259870 | 49261871 | 49259870 | ID=MsG0780038587.01;Name=MsG0780038587.01 |
| Chr7 | mRNA | 49259870 | 49261871 | 49259870 | ID=MsG0780038587.01.T01;Parent=MsG0780038587.01;Name=MsG0780038587.01.T01;_AED=0.49;_eAED=0.49;_QI=38|1|1|1|0.66|0.75|4|476|181 |
| Chr7 | exon | 49259870 | 49260415 | 49259870 | ID=MsG0780038587.01.T01:exon:5386;Parent=MsG0780038587.01.T01 |
| Chr7 | exon | 49260506 | 49260592 | 49260506 | ID=MsG0780038587.01.T01:exon:5385;Parent=MsG0780038587.01.T01 |
| Chr7 | exon | 49260676 | 49260792 | 49260676 | ID=MsG0780038587.01.T01:exon:5384;Parent=MsG0780038587.01.T01 |
| Chr7 | five_prime_UTR | 49261834 | 49261871 | 49261834 | ID=MsG0780038587.01.T01:five_prime_utr;Parent=MsG0780038587.01.T01 |
| Chr7 | CDS | 49261562 | 49261833 | 49261562 | ID=MsG0780038587.01.T01:cds;Parent=MsG0780038587.01.T01 |
| Chr7 | CDS | 49260676 | 49260792 | 49260676 | ID=MsG0780038587.01.T01:cds;Parent=MsG0780038587.01.T01 |
| Chr7 | CDS | 49260506 | 49260592 | 49260506 | ID=MsG0780038587.01.T01:cds;Parent=MsG0780038587.01.T01 |
| Chr7 | CDS | 49260346 | 49260415 | 49260346 | ID=MsG0780038587.01.T01:cds;Parent=MsG0780038587.01.T01 |
| Chr7 | three_prime_UTR | 49259870 | 49260345 | 49259870 | ID=MsG0780038587.01.T01:three_prime_utr;Parent=MsG0780038587.01.T01 |
| Chr7 | mRNA | 49260672 | 49261871 | 49260672 | ID=MsG0780038587.01.T02;Parent=MsG0780038587.01;Name=MsG0780038587.01.T02;_AED=0.50;_eAED=0.50;_QI=38|1|0.5|1|1|1|2|0|130 |
| Chr7 | exon | 49260672 | 49260792 | 49260672 | ID=MsG0780038587.01.T02:exon:5387;Parent=MsG0780038587.01.T02 |
| Chr7 | five_prime_UTR | 49261834 | 49261871 | 49261834 | ID=MsG0780038587.01.T02:five_prime_utr;Parent=MsG0780038587.01.T02 |
| Chr7 | CDS | 49261562 | 49261833 | 49261562 | ID=MsG0780038587.01.T02:cds;Parent=MsG0780038587.01.T02 |
| Chr7 | CDS | 49260672 | 49260792 | 49260672 | ID=MsG0780038587.01.T02:cds;Parent=MsG0780038587.01.T02 |
| Gene Sequence |
| Protein sequence |
