Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024792.01.T01 | XP_003611674.1 | 100 | 250 | 0 | 0 | 1 | 250 | 1 | 250 | 0 | 518 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024792.01.T01 | P52427 | 90 | 250 | 25 | 0 | 1 | 250 | 1 | 250 | 7.57E-173 | 479 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024792.01.T01 | G7K595 | 100.000 | 250 | 0 | 0 | 1 | 250 | 1 | 250 | 0.0 | 518 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047814.01 | MsG0580024792.01 | 0.854777 | 9.818341e-62 | 2.217593e-58 |
MsG0080048058.01 | MsG0580024792.01 | 0.805476 | 1.310857e-49 | 6.941762e-47 |
MsG0080048383.01 | MsG0580024792.01 | 0.805387 | 1.367848e-49 | 7.227097e-47 |
MsG0080048638.01 | MsG0580024792.01 | 0.815110 | 1.093164e-51 | 7.469063e-49 |
MsG0180000001.01 | MsG0580024792.01 | 0.849670 | 2.785511e-60 | 5.320843e-57 |
MsG0180000195.01 | MsG0580024792.01 | 0.807420 | 5.100203e-50 | 2.839418e-47 |
MsG0180000235.01 | MsG0580024792.01 | 0.855456 | 6.233364e-62 | 1.440057e-58 |
MsG0180001237.01 | MsG0580024792.01 | 0.815706 | 8.056949e-52 | 5.595999e-49 |
MsG0180001260.01 | MsG0580024792.01 | 0.854126 | 1.514810e-61 | 3.349203e-58 |
MsG0180001294.01 | MsG0580024792.01 | 0.811394 | 7.157358e-51 | 4.425281e-48 |
MsG0180001599.01 | MsG0580024792.01 | 0.817933 | 2.550153e-52 | 1.882531e-49 |
MsG0180003031.01 | MsG0580024792.01 | 0.830223 | 3.314955e-55 | 3.471100e-52 |
MsG0180003627.01 | MsG0580024792.01 | 0.833934 | 4.008463e-56 | 4.686048e-53 |
MsG0180003744.01 | MsG0580024792.01 | 0.828587 | 8.276845e-55 | 8.262230e-52 |
MsG0180004050.01 | MsG0580024792.01 | 0.825676 | 4.116567e-54 | 3.777702e-51 |
MsG0180004180.01 | MsG0580024792.01 | 0.818607 | 1.794880e-52 | 1.349729e-49 |
MsG0180004389.01 | MsG0580024792.01 | 0.807361 | 5.247559e-50 | 2.916940e-47 |
MsG0180004598.01 | MsG0580024792.01 | 0.809808 | 1.575541e-50 | 9.341797e-48 |
MsG0180004767.01 | MsG0580024792.01 | 0.835859 | 1.313062e-56 | 1.626029e-53 |
MsG0180004779.01 | MsG0580024792.01 | 0.805043 | 1.614761e-49 | 8.456710e-47 |
MsG0180005407.01 | MsG0580024792.01 | 0.813767 | 2.167017e-51 | 1.427761e-48 |
MsG0180005504.01 | MsG0580024792.01 | 0.801680 | 8.033381e-49 | 3.859776e-46 |
MsG0180005765.01 | MsG0580024792.01 | 0.818694 | 1.715209e-52 | 1.292933e-49 |
MsG0180005944.01 | MsG0580024792.01 | 0.811709 | 6.113944e-51 | 3.811544e-48 |
MsG0180005993.01 | MsG0580024792.01 | 0.811039 | 8.546516e-51 | 5.235073e-48 |
MsG0180006128.01 | MsG0580024792.01 | 0.810433 | 1.155614e-50 | 6.964700e-48 |
MsG0180006155.01 | MsG0580024792.01 | 0.834994 | 2.172598e-56 | 2.621550e-53 |
MsG0180006235.01 | MsG0580024792.01 | 0.827357 | 1.635611e-54 | 1.575530e-51 |
MsG0280006313.01 | MsG0580024792.01 | 0.807505 | 4.892801e-50 | 2.730017e-47 |
MsG0280010698.01 | MsG0580024792.01 | 0.807734 | 4.374065e-50 | 2.455138e-47 |
MsG0280011003.01 | MsG0580024792.01 | 0.841661 | 4.150158e-58 | 6.140201e-55 |
MsG0280011013.01 | MsG0580024792.01 | 0.846997 | 1.527444e-59 | 2.676650e-56 |
MsG0280011014.01 | MsG0580024792.01 | 0.823954 | 1.048492e-53 | 9.160908e-51 |
MsG0280011141.01 | MsG0580024792.01 | 0.826516 | 2.598949e-54 | 2.442657e-51 |
MsG0280011182.01 | MsG0580024792.01 | 0.824420 | 8.149007e-54 | 7.213850e-51 |
MsG0280011220.01 | MsG0580024792.01 | 0.841055 | 5.991081e-58 | 8.697931e-55 |
MsG0280011293.01 | MsG0580024792.01 | 0.801586 | 8.394872e-49 | 4.023939e-46 |
MsG0280011336.01 | MsG0580024792.01 | 0.813001 | 3.192461e-51 | 2.060219e-48 |
MsG0380012460.01 | MsG0580024792.01 | 0.818189 | 2.232361e-52 | 1.659541e-49 |
MsG0380013754.01 | MsG0580024792.01 | 0.861413 | 1.044001e-63 | 2.951878e-60 |
MsG0380013834.01 | MsG0580024792.01 | 0.802628 | 5.126278e-49 | 2.523269e-46 |
MsG0380014248.01 | MsG0580024792.01 | 0.821100 | 4.830212e-53 | 3.893070e-50 |
MsG0380014489.01 | MsG0580024792.01 | 0.855414 | 6.409616e-62 | 1.478745e-58 |
MsG0380014537.01 | MsG0580024792.01 | 0.814572 | 1.439209e-51 | 9.691948e-49 |
MsG0480018462.01 | MsG0580024792.01 | 0.832211 | 1.075664e-55 | 1.194172e-52 |
MsG0480018640.01 | MsG0580024792.01 | 0.818628 | 1.774918e-52 | 1.335506e-49 |
MsG0480018641.01 | MsG0580024792.01 | 0.825517 | 4.488968e-54 | 4.100809e-51 |
MsG0480019670.01 | MsG0580024792.01 | 0.808346 | 3.240355e-50 | 1.848348e-47 |
MsG0480020739.01 | MsG0580024792.01 | 0.800118 | 1.674429e-48 | 7.733418e-46 |
MsG0480021240.01 | MsG0580024792.01 | 0.813530 | 2.443285e-51 | 1.599608e-48 |
MsG0480021409.01 | MsG0580024792.01 | 0.806345 | 8.607195e-50 | 4.660534e-47 |
MsG0480021452.01 | MsG0580024792.01 | 0.813038 | 3.132756e-51 | 2.023690e-48 |
MsG0480021465.01 | MsG0580024792.01 | 0.821937 | 3.096003e-53 | 2.554455e-50 |
MsG0480021772.01 | MsG0580024792.01 | 0.815888 | 7.340616e-52 | 5.123455e-49 |
MsG0480021812.01 | MsG0580024792.01 | 0.889488 | 2.316755e-73 | 1.872919e-69 |
MsG0480021914.01 | MsG0580024792.01 | 0.831352 | 1.752195e-55 | 1.896591e-52 |
MsG0480021953.01 | MsG0580024792.01 | 0.802414 | 5.674668e-49 | 2.778135e-46 |
MsG0480022164.01 | MsG0580024792.01 | 0.810415 | 1.165787e-50 | 7.022713e-48 |
MsG0480022467.01 | MsG0580024792.01 | 0.803964 | 2.710791e-49 | 1.380814e-46 |
MsG0480022481.01 | MsG0580024792.01 | 0.804321 | 2.285228e-49 | 1.174704e-46 |
MsG0480022620.01 | MsG0580024792.01 | 0.824485 | 7.866850e-54 | 6.977501e-51 |
MsG0480022678.01 | MsG0580024792.01 | 0.843373 | 1.458604e-58 | 2.277569e-55 |
MsG0480022696.01 | MsG0580024792.01 | 0.819758 | 9.816979e-53 | 7.622417e-50 |
MsG0480022717.01 | MsG0580024792.01 | 0.854859 | 9.296007e-62 | 2.105353e-58 |
MsG0480023245.01 | MsG0580024792.01 | 0.809987 | 1.441920e-50 | 8.589972e-48 |
MsG0480023258.01 | MsG0580024792.01 | 0.815726 | 7.974064e-52 | 5.541709e-49 |
MsG0480023412.01 | MsG0580024792.01 | 0.875630 | 2.648533e-68 | 1.245647e-64 |
MsG0480023600.01 | MsG0580024792.01 | 0.849266 | 3.611489e-60 | 6.808812e-57 |
MsG0480023873.01 | MsG0580024792.01 | 0.845797 | 3.245342e-59 | 5.472070e-56 |
MsG0580024036.01 | MsG0580024792.01 | 0.819997 | 8.655001e-53 | 6.765227e-50 |
MsG0580024353.01 | MsG0580024792.01 | 0.835510 | 1.609223e-56 | 1.972016e-53 |
MsG0580024536.01 | MsG0580024792.01 | 0.808511 | 2.988081e-50 | 1.711745e-47 |
MsG0580024618.01 | MsG0580024792.01 | 0.867021 | 1.859255e-65 | 6.395328e-62 |
MsG0580024682.01 | MsG0580024792.01 | 0.800146 | 1.652888e-48 | 7.639273e-46 |
MsG0580024733.01 | MsG0580024792.01 | 0.804858 | 1.764960e-49 | 9.200053e-47 |
MsG0580024792.01 | MsG0580024819.01 | 0.811997 | 5.290849e-51 | 3.324035e-48 |
MsG0580024792.01 | MsG0580025489.01 | 0.810123 | 1.347847e-50 | 8.057748e-48 |
MsG0580024792.01 | MsG0580025989.01 | 0.804840 | 1.781074e-49 | 9.279547e-47 |
MsG0580024792.01 | MsG0580026225.01 | 0.818395 | 2.004208e-52 | 1.498564e-49 |
MsG0580024792.01 | MsG0580028394.01 | 0.806421 | 8.293640e-50 | 4.499538e-47 |
MsG0580024792.01 | MsG0580029189.01 | 0.837843 | 4.092639e-57 | 5.383300e-54 |
MsG0580024792.01 | MsG0580029594.01 | 0.804636 | 1.963812e-49 | 1.017724e-46 |
MsG0580024792.01 | MsG0580029658.01 | 0.819017 | 1.448039e-52 | 1.101497e-49 |
MsG0580024792.01 | MsG0580029762.01 | 0.815968 | 7.042806e-52 | 4.926728e-49 |
MsG0580024792.01 | MsG0580030003.01 | 0.815058 | 1.123127e-51 | 7.662848e-49 |
MsG0580024792.01 | MsG0680031506.01 | 0.847200 | 1.343985e-59 | 2.370603e-56 |
MsG0580024792.01 | MsG0680031507.01 | 0.870500 | 1.392320e-66 | 5.428171e-63 |
MsG0580024792.01 | MsG0680031508.01 | 0.874023 | 9.336191e-68 | 4.137872e-64 |
MsG0580024792.01 | MsG0680031699.01 | 0.819482 | 1.134850e-52 | 8.744081e-50 |
MsG0580024792.01 | MsG0680035306.01 | 0.809288 | 2.037701e-50 | 1.191635e-47 |
MsG0580024792.01 | MsG0680035574.01 | 0.862475 | 4.937181e-64 | 1.447930e-60 |
MsG0580024792.01 | MsG0780036663.01 | 0.846820 | 1.708311e-59 | 2.976868e-56 |
MsG0580024792.01 | MsG0780037360.01 | 0.821972 | 3.038321e-53 | 2.509366e-50 |
MsG0580024792.01 | MsG0780038401.01 | 0.828206 | 1.022466e-54 | 1.009494e-51 |
MsG0580024792.01 | MsG0780039243.01 | 0.805661 | 1.198701e-49 | 6.378224e-47 |
MsG0580024792.01 | MsG0780039845.01 | 0.823114 | 1.648453e-53 | 1.406538e-50 |
MsG0580024792.01 | MsG0780039858.01 | 0.813097 | 3.041831e-51 | 1.967922e-48 |
MsG0580024792.01 | MsG0780040030.01 | 0.829952 | 3.859603e-55 | 4.009671e-52 |
MsG0580024792.01 | MsG0780040044.01 | 0.801290 | 9.652770e-49 | 4.592734e-46 |
MsG0580024792.01 | MsG0780040312.01 | 0.833841 | 4.229542e-56 | 4.930639e-53 |
MsG0580024792.01 | MsG0780040411.01 | 0.839631 | 1.411619e-57 | 1.960994e-54 |
MsG0580024792.01 | MsG0780040597.01 | 0.813047 | 3.118229e-51 | 2.014777e-48 |
MsG0580024792.01 | MsG0780040841.01 | 0.836591 | 8.556752e-57 | 1.083231e-53 |
MsG0580024792.01 | MsG0780040845.01 | 0.851686 | 7.548473e-61 | 1.540072e-57 |
MsG0580024792.01 | MsG0780041239.01 | 0.830822 | 2.364681e-55 | 2.519769e-52 |
MsG0580024792.01 | MsG0780041305.01 | 0.802744 | 4.851688e-49 | 2.395230e-46 |
MsG0580024792.01 | MsG0780041392.01 | 0.820804 | 5.650526e-53 | 4.516851e-50 |
MsG0580024792.01 | MsG0780041469.01 | 0.812372 | 4.381732e-51 | 2.781068e-48 |
MsG0580024792.01 | MsG0780041490.01 | 0.831331 | 1.773574e-55 | 1.918476e-52 |
MsG0580024792.01 | MsG0780041535.01 | 0.812438 | 4.239103e-51 | 2.695525e-48 |
MsG0580024792.01 | MsG0780041796.01 | 0.851864 | 6.722175e-61 | 1.379000e-57 |
MsG0580024792.01 | MsG0880042052.01 | 0.815360 | 9.622155e-52 | 6.619744e-49 |
MsG0580024792.01 | MsG0880042552.01 | 0.859848 | 3.114172e-63 | 8.341968e-60 |
MsG0580024792.01 | MsG0880042760.01 | 0.808691 | 2.734818e-50 | 1.573997e-47 |
MsG0580024792.01 | MsG0880042829.01 | 0.807022 | 6.191131e-50 | 3.411254e-47 |
MsG0580024792.01 | MsG0880042848.01 | 0.847529 | 1.091780e-59 | 1.946419e-56 |
MsG0580024792.01 | MsG0880043532.01 | 0.805762 | 1.141704e-49 | 6.091013e-47 |
MsG0580024792.01 | MsG0880044075.01 | 0.813386 | 2.627468e-51 | 1.713496e-48 |
MsG0580024792.01 | MsG0880044565.01 | 0.816833 | 4.509313e-52 | 3.229950e-49 |
MsG0580024792.01 | MsG0880044917.01 | 0.815704 | 8.067370e-52 | 5.602790e-49 |
MsG0580024792.01 | MsG0880044990.01 | 0.827315 | 1.674723e-54 | 1.611095e-51 |
MsG0580024792.01 | MsG0880045106.01 | 0.806070 | 9.834076e-50 | 5.287790e-47 |
MsG0580024792.01 | MsG0880045145.01 | 0.819215 | 1.305709e-52 | 9.985569e-50 |
MsG0580024792.01 | MsG0880045393.01 | 0.831419 | 1.687165e-55 | 1.829792e-52 |
MsG0580024792.01 | MsG0880045619.01 | 0.871988 | 4.492176e-67 | 1.847973e-63 |
MsG0580024792.01 | MsG0880045754.01 | 0.825442 | 4.677817e-54 | 4.263903e-51 |
MsG0580024792.01 | MsG0880046027.01 | 0.806816 | 6.846191e-50 | 3.752161e-47 |
MsG0580024792.01 | MsG0880046113.01 | 0.829192 | 5.904879e-55 | 6.000600e-52 |
MsG0580024792.01 | MsG0880046132.01 | 0.802147 | 6.440324e-49 | 3.131459e-46 |
MsG0580024792.01 | MsG0880046253.01 | 0.824429 | 8.110184e-54 | 7.181380e-51 |
MsG0580024792.01 | MsG0880047012.01 | 0.816798 | 4.592217e-52 | 3.286078e-49 |
MsG0580024792.01 | MsG0880047192.01 | 0.853490 | 2.309151e-61 | 4.998087e-58 |
MsG0580024792.01 | MsG0880047470.01 | 0.809257 | 2.068992e-50 | 1.208931e-47 |
MsG0580024792.01 | MsG0880047472.01 | 0.831671 | 1.462551e-55 | 1.598181e-52 |
MsG0380015168.01 | MsG0580024792.01 | 0.807568 | 4.744412e-50 | 2.651406e-47 |
MsG0380015444.01 | MsG0580024792.01 | 0.875688 | 2.530104e-68 | 1.192472e-64 |
MsG0380015512.01 | MsG0580024792.01 | 0.801883 | 7.296127e-49 | 3.524030e-46 |
MsG0380015564.01 | MsG0580024792.01 | 0.824951 | 6.111702e-54 | 5.494160e-51 |
MsG0380015713.01 | MsG0580024792.01 | 0.858802 | 6.413368e-63 | 1.657039e-59 |
MsG0380016389.01 | MsG0580024792.01 | 0.805356 | 1.388789e-49 | 7.332022e-47 |
MsG0380016859.01 | MsG0580024792.01 | 0.807466 | 4.987023e-50 | 2.779776e-47 |
MsG0380016970.01 | MsG0580024792.01 | 0.801476 | 8.845717e-49 | 4.228429e-46 |
MsG0380016971.01 | MsG0580024792.01 | 0.858795 | 6.446812e-63 | 1.665256e-59 |
MsG0380017049.01 | MsG0580024792.01 | 0.845801 | 3.237685e-59 | 5.459863e-56 |
MsG0380017195.01 | MsG0580024792.01 | 0.800162 | 1.640263e-48 | 7.583794e-46 |
MsG0380017330.01 | MsG0580024792.01 | 0.801637 | 8.197521e-49 | 3.934422e-46 |
MsG0380017375.01 | MsG0580024792.01 | 0.828303 | 9.688765e-55 | 9.592010e-52 |
MsG0380017719.01 | MsG0580024792.01 | 0.803717 | 3.051062e-49 | 1.544214e-46 |
MsG0480018126.01 | MsG0580024792.01 | 0.807119 | 5.905326e-50 | 3.261895e-47 |
MsG0280006595.01 | MsG0580024792.01 | 0.800471 | 1.419379e-48 | 6.614251e-46 |
MsG0280006759.01 | MsG0580024792.01 | 0.801515 | 8.684232e-49 | 4.155277e-46 |
MsG0280007089.01 | MsG0580024792.01 | 0.806149 | 9.461981e-50 | 5.098066e-47 |
MsG0280007321.01 | MsG0580024792.01 | 0.803716 | 3.052349e-49 | 1.544829e-46 |
MsG0280007529.01 | MsG0580024792.01 | 0.817897 | 2.598711e-52 | 1.916446e-49 |
MsG0280007564.01 | MsG0580024792.01 | 0.855004 | 8.438323e-62 | 1.920215e-58 |
MsG0280007585.01 | MsG0580024792.01 | 0.813637 | 2.314313e-51 | 1.519497e-48 |
MsG0280007648.01 | MsG0580024792.01 | 0.801976 | 6.984342e-49 | 3.381012e-46 |
MsG0280007790.01 | MsG0580024792.01 | 0.813418 | 2.585937e-51 | 1.687814e-48 |
MsG0280007876.01 | MsG0580024792.01 | 0.814639 | 1.390355e-51 | 9.380179e-49 |
MsG0280008327.01 | MsG0580024792.01 | 0.828733 | 7.630445e-55 | 7.648905e-52 |
MsG0280008502.01 | MsG0580024792.01 | 0.810123 | 1.347847e-50 | 8.057748e-48 |
MsG0280009996.01 | MsG0580024792.01 | 0.809330 | 1.996204e-50 | 1.168671e-47 |
MsG0280010233.01 | MsG0580024792.01 | 0.807348 | 5.280577e-50 | 2.934360e-47 |
MsG0280010447.01 | MsG0580024792.01 | 0.824517 | 7.731868e-54 | 6.864343e-51 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024792.01.T01 | MTR_5g016590 | 100.000 | 250 | 0 | 0 | 1 | 250 | 1 | 250 | 0.0 | 518 |
MsG0580024792.01.T01 | MTR_7g070070 | 98.000 | 250 | 5 | 0 | 1 | 250 | 1 | 250 | 0.0 | 509 |
MsG0580024792.01.T01 | MTR_1g112250 | 42.324 | 241 | 121 | 7 | 5 | 239 | 8 | 236 | 6.44e-59 | 187 |
MsG0580024792.01.T01 | MTR_8g075320 | 42.500 | 200 | 112 | 3 | 4 | 202 | 3 | 200 | 4.51e-53 | 172 |
MsG0580024792.01.T01 | MTR_2g016050 | 41.500 | 200 | 114 | 3 | 4 | 202 | 3 | 200 | 9.48e-51 | 166 |
MsG0580024792.01.T01 | MTR_0167s0060 | 36.325 | 234 | 142 | 4 | 4 | 237 | 5 | 231 | 4.55e-48 | 159 |
MsG0580024792.01.T01 | MTR_1g022410 | 38.785 | 214 | 125 | 3 | 4 | 215 | 5 | 214 | 3.34e-43 | 148 |
MsG0580024792.01.T01 | MTR_8g464460 | 41.709 | 199 | 112 | 3 | 5 | 200 | 9 | 206 | 3.34e-43 | 147 |
MsG0580024792.01.T01 | MTR_2g060830 | 36.975 | 238 | 138 | 6 | 5 | 237 | 9 | 239 | 1.22e-40 | 140 |
MsG0580024792.01.T01 | MTR_6g024135 | 35.071 | 211 | 135 | 2 | 5 | 215 | 8 | 216 | 2.17e-37 | 132 |
MsG0580024792.01.T01 | MTR_4g012740 | 28.968 | 252 | 135 | 6 | 4 | 215 | 236 | 483 | 6.59e-22 | 94.7 |
MsG0580024792.01.T01 | MTR_6g013300 | 32.821 | 195 | 112 | 8 | 33 | 220 | 138 | 320 | 1.11e-16 | 78.6 |
MsG0580024792.01.T01 | MTR_4g057090 | 29.947 | 187 | 119 | 5 | 26 | 207 | 110 | 289 | 3.19e-14 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024792.01.T01 | AT3G22110 | 90.400 | 250 | 24 | 0 | 1 | 250 | 1 | 250 | 3.79e-173 | 477 |
MsG0580024792.01.T01 | AT4G15165 | 72.000 | 250 | 28 | 1 | 1 | 250 | 1 | 208 | 3.91e-127 | 359 |
MsG0580024792.01.T01 | AT3G14290 | 42.149 | 242 | 122 | 7 | 4 | 239 | 7 | 236 | 1.90e-59 | 188 |
MsG0580024792.01.T01 | AT1G53850 | 41.322 | 242 | 124 | 7 | 4 | 239 | 7 | 236 | 1.21e-58 | 186 |
MsG0580024792.01.T01 | AT1G53850 | 41.322 | 242 | 124 | 7 | 4 | 239 | 7 | 236 | 1.21e-58 | 186 |
MsG0580024792.01.T01 | AT5G66140 | 42.000 | 200 | 113 | 3 | 4 | 202 | 3 | 200 | 1.84e-52 | 171 |
MsG0580024792.01.T01 | AT3G51260 | 42.500 | 200 | 112 | 3 | 4 | 202 | 3 | 200 | 2.19e-52 | 171 |
MsG0580024792.01.T01 | AT3G51260 | 42.500 | 200 | 112 | 3 | 4 | 202 | 3 | 200 | 2.39e-52 | 170 |
MsG0580024792.01.T01 | AT1G16470 | 37.264 | 212 | 130 | 3 | 4 | 215 | 5 | 213 | 1.37e-46 | 155 |
MsG0580024792.01.T01 | AT1G16470 | 37.264 | 212 | 130 | 3 | 4 | 215 | 5 | 213 | 1.37e-46 | 155 |
MsG0580024792.01.T01 | AT1G79210 | 37.264 | 212 | 130 | 3 | 4 | 215 | 5 | 213 | 1.61e-46 | 155 |
MsG0580024792.01.T01 | AT1G79210 | 37.264 | 212 | 130 | 3 | 4 | 215 | 5 | 213 | 1.61e-46 | 155 |
MsG0580024792.01.T01 | AT1G79210 | 37.264 | 212 | 130 | 3 | 4 | 215 | 5 | 213 | 1.61e-46 | 155 |
MsG0580024792.01.T01 | AT5G42790 | 39.320 | 206 | 119 | 3 | 4 | 207 | 5 | 206 | 5.83e-44 | 150 |
MsG0580024792.01.T01 | AT1G47250 | 38.350 | 206 | 121 | 3 | 4 | 207 | 5 | 206 | 3.15e-43 | 148 |
MsG0580024792.01.T01 | AT5G35590 | 40.201 | 199 | 115 | 3 | 5 | 200 | 9 | 206 | 2.16e-41 | 142 |
MsG0580024792.01.T01 | AT2G05840 | 37.688 | 199 | 120 | 3 | 5 | 200 | 9 | 206 | 5.38e-38 | 132 |
MsG0580024792.01.T01 | AT2G05840 | 37.688 | 199 | 120 | 3 | 5 | 200 | 9 | 206 | 6.10e-38 | 133 |
MsG0580024792.01.T01 | AT2G05840 | 37.745 | 204 | 116 | 4 | 5 | 205 | 9 | 204 | 3.44e-37 | 130 |
MsG0580024792.01.T01 | AT2G27020 | 32.314 | 229 | 150 | 4 | 5 | 233 | 8 | 231 | 2.85e-36 | 129 |
MsG0580024792.01.T01 | AT2G27020 | 32.314 | 229 | 150 | 4 | 5 | 233 | 110 | 333 | 3.33e-35 | 129 |
Find 75 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGTCTCTTTCCTGTTTGC+AGG | 0.211747 | 5:+9719111 | MsG0580024792.01.T01:CDS |
CTCTTTCCTGTTTGCAGGAT+GGG | 0.248276 | 5:+9719116 | MsG0580024792.01.T01:CDS |
ACTAAGCTGTTGGTGAAGTC+TGG | 0.280754 | 5:+9719420 | MsG0580024792.01.T01:CDS |
CATGTTGCATGTGCTGTTGC+TGG | 0.302104 | 5:+9718931 | MsG0580024792.01.T01:CDS |
AAGCAAGGTTACACACAATT+TGG | 0.305332 | 5:+9719072 | MsG0580024792.01.T01:CDS |
GGATCCTAGCAGTGTTGATT+AGG | 0.325400 | 5:-9718975 | None:intergenic |
GTCGAAGGATGGGGTTGTTC+TGG | 0.338789 | 5:+9718834 | MsG0580024792.01.T01:CDS |
AGCAGTCTCTGTTGCTGGTT+GGG | 0.364107 | 5:-9719448 | None:intergenic |
GAGGTGTTTCTTGCACCATC+TGG | 0.378354 | 5:+9719360 | MsG0580024792.01.T01:CDS |
GAAAGTTCTGAGCAAAACTA+TGG | 0.379385 | 5:+9719299 | MsG0580024792.01.T01:CDS |
AACAGCTTAGTCAAGTTCTC+TGG | 0.381164 | 5:-9719408 | None:intergenic |
AGCTAAGCAGTCTCTGTTGC+TGG | 0.412030 | 5:-9719453 | None:intergenic |
TTTGGTGGTCTCCGTCCGTT+TGG | 0.423167 | 5:+9719090 | MsG0580024792.01.T01:CDS |
GGTTGGAAAGCCGGTGCTAT+TGG | 0.431124 | 5:+9719192 | MsG0580024792.01.T01:CDS |
TGATTGTGCTGCCTGGTTGT+TGG | 0.432231 | 5:-9719217 | None:intergenic |
AGCACAATCAATTCTAAAAC+AGG | 0.435611 | 5:+9719230 | MsG0580024792.01.T01:CDS |
GATTGAACCAACTGTTCAAC+AGG | 0.438880 | 5:-9719036 | None:intergenic |
GTTCAACAGGCATTGGCTCT+TGG | 0.441840 | 5:-9719023 | None:intergenic |
AACTATGGCGGTTGGAAAGC+CGG | 0.449553 | 5:+9719183 | MsG0580024792.01.T01:CDS |
CTAAGCTGTTGGTGAAGTCT+GGG | 0.453484 | 5:+9719421 | MsG0580024792.01.T01:CDS |
AGCGATCCTAGTGGAAACTA+TGG | 0.459227 | 5:+9719168 | MsG0580024792.01.T01:CDS |
TCTCTTTCCTGTTTGCAGGA+TGG | 0.460327 | 5:+9719115 | MsG0580024792.01.T01:CDS |
AAGCAGTCTCTGTTGCTGGT+TGG | 0.471981 | 5:-9719449 | None:intergenic |
ATGTTGCATGTGCTGTTGCT+GGG | 0.490338 | 5:+9718932 | MsG0580024792.01.T01:CDS |
TGTTCTGGTTGGCGAAAAGA+AGG | 0.492197 | 5:+9718849 | MsG0580024792.01.T01:CDS |
TGCTCAGAACTTTCAGTGCA+AGG | 0.496408 | 5:-9719290 | None:intergenic |
ACAGCTTAGTCAAGTTCTCT+GGG | 0.496829 | 5:-9719407 | None:intergenic |
AGCAGTGTTGATTAGGATGT+TGG | 0.496912 | 5:-9718968 | None:intergenic |
GCCAATGCCTGTTGAACAGT+TGG | 0.499789 | 5:+9719029 | MsG0580024792.01.T01:CDS |
TTAGAATTGATTGTGCTGCC+TGG | 0.504956 | 5:-9719224 | None:intergenic |
AAGCTTATCCGAGGTAAGAC+TGG | 0.507716 | 5:-9719328 | None:intergenic |
TGTTGAGGTTTGCAGAAGCT+TGG | 0.509366 | 5:-9718878 | None:intergenic |
ACTTGGTAAAGACGTCCTTC+AGG | 0.509793 | 5:-9718760 | None:intergenic |
CAACCGCCATAGTTTCCACT+AGG | 0.512105 | 5:-9719174 | None:intergenic |
TAGGAATCTTGTCGAAGGAT+GGG | 0.512721 | 5:+9718824 | MsG0580024792.01.T01:CDS |
CAAATGAGTAACGTTGTGCT+TGG | 0.513670 | 5:-9718996 | None:intergenic |
AAGGATGGGGTTGTTCTGGT+TGG | 0.521102 | 5:+9718838 | MsG0580024792.01.T01:CDS |
ACCAACTGTTCAACAGGCAT+TGG | 0.523493 | 5:-9719030 | None:intergenic |
GGAAATGCTGGTACTGCCAT+AGG | 0.528749 | 5:+9718805 | MsG0580024792.01.T01:CDS |
ATAGGAATCTTGTCGAAGGA+TGG | 0.537221 | 5:+9718823 | MsG0580024792.01.T01:CDS |
TGCTATTGGTGCCAACAACC+AGG | 0.540083 | 5:+9719206 | MsG0580024792.01.T01:CDS |
CTAGTGGAAACTATGGCGGT+TGG | 0.542853 | 5:+9719175 | MsG0580024792.01.T01:CDS |
ATCCTTCGACAAGATTCCTA+TGG | 0.544761 | 5:-9718821 | None:intergenic |
ATGGAGGCCATTGGAAATGC+TGG | 0.546199 | 5:+9718793 | MsG0580024792.01.T01:CDS |
AAATTGTGTGTAACCTTGCT+TGG | 0.550671 | 5:-9719070 | None:intergenic |
CCTCCATTGCATACTCCACT+TGG | 0.550938 | 5:-9718777 | None:intergenic |
AATTCTAAAACAGGACTACA+AGG | 0.553479 | 5:+9719239 | MsG0580024792.01.T01:CDS |
AGGAATCTTGTCGAAGGATG+GGG | 0.558136 | 5:+9718825 | MsG0580024792.01.T01:CDS |
ACATCCTAATCAACACTGCT+AGG | 0.565540 | 5:+9718971 | MsG0580024792.01.T01:CDS |
CAAGGTTACACACAATTTGG+TGG | 0.565666 | 5:+9719075 | MsG0580024792.01.T01:CDS |
GTTGTTGGCACCAATAGCAC+CGG | 0.570780 | 5:-9719202 | None:intergenic |
GTTTCTTGCACCATCTGGAA+AGG | 0.578192 | 5:+9719365 | MsG0580024792.01.T01:CDS |
GTTGATTAGGATGTTGGCAT+CGG | 0.579727 | 5:-9718962 | None:intergenic |
AACAGGAAAGAGACTCCAAA+CGG | 0.582222 | 5:-9719105 | None:intergenic |
CAGGAGAGAAGATTGTTGTA+CGG | 0.584834 | 5:-9718741 | None:intergenic |
CCAAGTGGAGTATGCAATGG+AGG | 0.586792 | 5:+9718777 | MsG0580024792.01.T01:CDS |
GAGTATGCAATGGAGGCCAT+TGG | 0.587807 | 5:+9718784 | MsG0580024792.01.T01:CDS |
AGAGAACTTGACTAAGCTGT+TGG | 0.594383 | 5:+9719410 | MsG0580024792.01.T01:CDS |
ACAACAATCTTCTCTCCTGA+AGG | 0.598896 | 5:+9718745 | MsG0580024792.01.T01:CDS |
TTACCAAGTGGAGTATGCAA+TGG | 0.599728 | 5:+9718774 | MsG0580024792.01.T01:CDS |
TCTCTTTGTGATACCAAGCA+AGG | 0.600349 | 5:+9719057 | MsG0580024792.01.T01:CDS |
GGAAAGAGACTCCAAACGGA+CGG | 0.606946 | 5:-9719101 | None:intergenic |
TGCCATAGGAATCTTGTCGA+AGG | 0.620793 | 5:+9718819 | MsG0580024792.01.T01:CDS |
GGCAGTACCAGCATTTCCAA+TGG | 0.624766 | 5:-9718800 | None:intergenic |
GGATAAGCTTGAACTTGCAG+AGG | 0.632561 | 5:+9719341 | MsG0580024792.01.T01:CDS |
TGATACTTGACCTTTCCAGA+TGG | 0.634603 | 5:-9719375 | None:intergenic |
TGCAAGTTCAAGCTTATCCG+AGG | 0.657193 | 5:-9719337 | None:intergenic |
TGAAGGACGTCTTTACCAAG+TGG | 0.670157 | 5:+9718762 | MsG0580024792.01.T01:CDS |
CTTTACATGAGCGATCCTAG+TGG | 0.672737 | 5:+9719159 | MsG0580024792.01.T01:CDS |
GGACAGCACCAGTCTTACCT+CGG | 0.676388 | 5:+9719320 | MsG0580024792.01.T01:CDS |
TAAGCTGTTGGTGAAGTCTG+GGG | 0.680201 | 5:+9719422 | MsG0580024792.01.T01:CDS |
ACTACAAGGATGATATCACA+AGG | 0.683851 | 5:+9719253 | MsG0580024792.01.T01:CDS |
GATCCTAGTGGAAACTATGG+CGG | 0.705334 | 5:+9719171 | MsG0580024792.01.T01:CDS |
CAGCTTAGTCAAGTTCTCTG+GGG | 0.728921 | 5:-9719406 | None:intergenic |
CTACAAGGATGATATCACAA+GGG | 0.766354 | 5:+9719254 | MsG0580024792.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTCTAAAACAGGACTACA+AGG | + | Chr5:9719239-9719258 | MsG0580024792.01.T01:CDS | 30.0% |
!! | AGCACAATCAATTCTAAAAC+AGG | + | Chr5:9719230-9719249 | MsG0580024792.01.T01:CDS | 30.0% |
AAATTGTGTGTAACCTTGCT+TGG | - | Chr5:9719073-9719092 | None:intergenic | 35.0% | |
AAGCAAGGTTACACACAATT+TGG | + | Chr5:9719072-9719091 | MsG0580024792.01.T01:CDS | 35.0% | |
ACTACAAGGATGATATCACA+AGG | + | Chr5:9719253-9719272 | MsG0580024792.01.T01:CDS | 35.0% | |
CTACAAGGATGATATCACAA+GGG | + | Chr5:9719254-9719273 | MsG0580024792.01.T01:CDS | 35.0% | |
!! | CATTTTCTCAGTTGATGTTG+AGG | - | Chr5:9718896-9718915 | None:intergenic | 35.0% |
!! | GAAAGTTCTGAGCAAAACTA+TGG | + | Chr5:9719299-9719318 | MsG0580024792.01.T01:CDS | 35.0% |
AACAGCTTAGTCAAGTTCTC+TGG | - | Chr5:9719411-9719430 | None:intergenic | 40.0% | |
AACAGGAAAGAGACTCCAAA+CGG | - | Chr5:9719108-9719127 | None:intergenic | 40.0% | |
ACAACAATCTTCTCTCCTGA+AGG | + | Chr5:9718745-9718764 | MsG0580024792.01.T01:CDS | 40.0% | |
ACAGCTTAGTCAAGTTCTCT+GGG | - | Chr5:9719410-9719429 | None:intergenic | 40.0% | |
ACATCCTAATCAACACTGCT+AGG | + | Chr5:9718971-9718990 | MsG0580024792.01.T01:CDS | 40.0% | |
AGAGAACTTGACTAAGCTGT+TGG | + | Chr5:9719410-9719429 | MsG0580024792.01.T01:CDS | 40.0% | |
ATAGGAATCTTGTCGAAGGA+TGG | + | Chr5:9718823-9718842 | MsG0580024792.01.T01:CDS | 40.0% | |
ATCCTTCGACAAGATTCCTA+TGG | - | Chr5:9718824-9718843 | None:intergenic | 40.0% | |
CAAATGAGTAACGTTGTGCT+TGG | - | Chr5:9718999-9719018 | None:intergenic | 40.0% | |
CAAGGTTACACACAATTTGG+TGG | + | Chr5:9719075-9719094 | MsG0580024792.01.T01:CDS | 40.0% | |
CAGGAGAGAAGATTGTTGTA+CGG | - | Chr5:9718744-9718763 | None:intergenic | 40.0% | |
GATTGAACCAACTGTTCAAC+AGG | - | Chr5:9719039-9719058 | None:intergenic | 40.0% | |
GTTGATTAGGATGTTGGCAT+CGG | - | Chr5:9718965-9718984 | None:intergenic | 40.0% | |
TAGGAATCTTGTCGAAGGAT+GGG | + | Chr5:9718824-9718843 | MsG0580024792.01.T01:CDS | 40.0% | |
TCTCTTTGTGATACCAAGCA+AGG | + | Chr5:9719057-9719076 | MsG0580024792.01.T01:CDS | 40.0% | |
TGATACTTGACCTTTCCAGA+TGG | - | Chr5:9719378-9719397 | None:intergenic | 40.0% | |
TTACCAAGTGGAGTATGCAA+TGG | + | Chr5:9718774-9718793 | MsG0580024792.01.T01:CDS | 40.0% | |
TTAGAATTGATTGTGCTGCC+TGG | - | Chr5:9719227-9719246 | None:intergenic | 40.0% | |
!! | AGCAGTGTTGATTAGGATGT+TGG | - | Chr5:9718971-9718990 | None:intergenic | 40.0% |
AAGCTTATCCGAGGTAAGAC+TGG | - | Chr5:9719331-9719350 | None:intergenic | 45.0% | |
ACCAACTGTTCAACAGGCAT+TGG | - | Chr5:9719033-9719052 | None:intergenic | 45.0% | |
ACTTGGTAAAGACGTCCTTC+AGG | - | Chr5:9718763-9718782 | None:intergenic | 45.0% | |
AGCGATCCTAGTGGAAACTA+TGG | + | Chr5:9719168-9719187 | MsG0580024792.01.T01:CDS | 45.0% | |
AGGAATCTTGTCGAAGGATG+GGG | + | Chr5:9718825-9718844 | MsG0580024792.01.T01:CDS | 45.0% | |
CAGCTTAGTCAAGTTCTCTG+GGG | - | Chr5:9719409-9719428 | None:intergenic | 45.0% | |
CTCTTTCCTGTTTGCAGGAT+GGG | + | Chr5:9719116-9719135 | MsG0580024792.01.T01:CDS | 45.0% | |
CTTTACATGAGCGATCCTAG+TGG | + | Chr5:9719159-9719178 | MsG0580024792.01.T01:CDS | 45.0% | |
GATCCTAGTGGAAACTATGG+CGG | + | Chr5:9719171-9719190 | MsG0580024792.01.T01:CDS | 45.0% | |
GCAGGATGGGACAAAAACTT+CGG | + | Chr5:9719129-9719148 | MsG0580024792.01.T01:CDS | 45.0% | |
GGATAAGCTTGAACTTGCAG+AGG | + | Chr5:9719341-9719360 | MsG0580024792.01.T01:CDS | 45.0% | |
GTTTCTTGCACCATCTGGAA+AGG | + | Chr5:9719365-9719384 | MsG0580024792.01.T01:CDS | 45.0% | |
TCTCTTTCCTGTTTGCAGGA+TGG | + | Chr5:9719115-9719134 | MsG0580024792.01.T01:CDS | 45.0% | |
TGAAGGACGTCTTTACCAAG+TGG | + | Chr5:9718762-9718781 | MsG0580024792.01.T01:CDS | 45.0% | |
TGCAAGTTCAAGCTTATCCG+AGG | - | Chr5:9719340-9719359 | None:intergenic | 45.0% | |
TGCCATAGGAATCTTGTCGA+AGG | + | Chr5:9718819-9718838 | MsG0580024792.01.T01:CDS | 45.0% | |
TGCTCAGAACTTTCAGTGCA+AGG | - | Chr5:9719293-9719312 | None:intergenic | 45.0% | |
TGTTGAGGTTTGCAGAAGCT+TGG | - | Chr5:9718881-9718900 | None:intergenic | 45.0% | |
! | ACTAAGCTGTTGGTGAAGTC+TGG | + | Chr5:9719420-9719439 | MsG0580024792.01.T01:CDS | 45.0% |
! | ATGTTGCATGTGCTGTTGCT+GGG | + | Chr5:9718932-9718951 | MsG0580024792.01.T01:CDS | 45.0% |
! | CTAAGCTGTTGGTGAAGTCT+GGG | + | Chr5:9719421-9719440 | MsG0580024792.01.T01:CDS | 45.0% |
! | TAAGCTGTTGGTGAAGTCTG+GGG | + | Chr5:9719422-9719441 | MsG0580024792.01.T01:CDS | 45.0% |
! | TGTTCTGGTTGGCGAAAAGA+AGG | + | Chr5:9718849-9718868 | MsG0580024792.01.T01:CDS | 45.0% |
! | TTTTGTCCCATCCTGCAAAC+AGG | - | Chr5:9719125-9719144 | None:intergenic | 45.0% |
!! | GGATCCTAGCAGTGTTGATT+AGG | - | Chr5:9718978-9718997 | None:intergenic | 45.0% |
AACTATGGCGGTTGGAAAGC+CGG | + | Chr5:9719183-9719202 | MsG0580024792.01.T01:CDS | 50.0% | |
AAGCAGTCTCTGTTGCTGGT+TGG | - | Chr5:9719452-9719471 | None:intergenic | 50.0% | |
AAGGATGGGGTTGTTCTGGT+TGG | + | Chr5:9718838-9718857 | MsG0580024792.01.T01:CDS | 50.0% | |
ATGGAGGCCATTGGAAATGC+TGG | + | Chr5:9718793-9718812 | MsG0580024792.01.T01:CDS | 50.0% | |
CAACCGCCATAGTTTCCACT+AGG | - | Chr5:9719177-9719196 | None:intergenic | 50.0% | |
CCAAGTGGAGTATGCAATGG+AGG | + | Chr5:9718777-9718796 | MsG0580024792.01.T01:CDS | 50.0% | |
CCTCCATTGCATACTCCACT+TGG | - | Chr5:9718780-9718799 | None:intergenic | 50.0% | |
CTAGTGGAAACTATGGCGGT+TGG | + | Chr5:9719175-9719194 | MsG0580024792.01.T01:CDS | 50.0% | |
GAGTATGCAATGGAGGCCAT+TGG | + | Chr5:9718784-9718803 | MsG0580024792.01.T01:CDS | 50.0% | |
GCCAATGCCTGTTGAACAGT+TGG | + | Chr5:9719029-9719048 | MsG0580024792.01.T01:CDS | 50.0% | |
GGAAAGAGACTCCAAACGGA+CGG | - | Chr5:9719104-9719123 | None:intergenic | 50.0% | |
GGAAATGCTGGTACTGCCAT+AGG | + | Chr5:9718805-9718824 | MsG0580024792.01.T01:CDS | 50.0% | |
GGAGTCTCTTTCCTGTTTGC+AGG | + | Chr5:9719111-9719130 | MsG0580024792.01.T01:CDS | 50.0% | |
GGCAGTACCAGCATTTCCAA+TGG | - | Chr5:9718803-9718822 | None:intergenic | 50.0% | |
GTTGTTGGCACCAATAGCAC+CGG | - | Chr5:9719205-9719224 | None:intergenic | 50.0% | |
TGATTGTGCTGCCTGGTTGT+TGG | - | Chr5:9719220-9719239 | None:intergenic | 50.0% | |
! | AGCAGTCTCTGTTGCTGGTT+GGG | - | Chr5:9719451-9719470 | None:intergenic | 50.0% |
! | CATGTTGCATGTGCTGTTGC+TGG | + | Chr5:9718931-9718950 | MsG0580024792.01.T01:CDS | 50.0% |
! | GAGGTGTTTCTTGCACCATC+TGG | + | Chr5:9719360-9719379 | MsG0580024792.01.T01:CDS | 50.0% |
!! | GTTCAACAGGCATTGGCTCT+TGG | - | Chr5:9719026-9719045 | None:intergenic | 50.0% |
!! | TGCTATTGGTGCCAACAACC+AGG | + | Chr5:9719206-9719225 | MsG0580024792.01.T01:CDS | 50.0% |
GGACAGCACCAGTCTTACCT+CGG | + | Chr5:9719320-9719339 | MsG0580024792.01.T01:CDS | 55.0% | |
GTCGAAGGATGGGGTTGTTC+TGG | + | Chr5:9718834-9718853 | MsG0580024792.01.T01:CDS | 55.0% | |
! | TTTGGTGGTCTCCGTCCGTT+TGG | + | Chr5:9719090-9719109 | MsG0580024792.01.T01:CDS | 55.0% |
!! | GGTTGGAAAGCCGGTGCTAT+TGG | + | Chr5:9719192-9719211 | MsG0580024792.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 9718721 | 9719473 | 9718721 | ID=MsG0580024792.01;Name=MsG0580024792.01 |
Chr5 | mRNA | 9718721 | 9719473 | 9718721 | ID=MsG0580024792.01.T01;Parent=MsG0580024792.01;Name=MsG0580024792.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|250 |
Chr5 | exon | 9718721 | 9719473 | 9718721 | ID=MsG0580024792.01.T01:exon:1749;Parent=MsG0580024792.01.T01 |
Chr5 | CDS | 9718721 | 9719473 | 9718721 | ID=MsG0580024792.01.T01:cds;Parent=MsG0580024792.01.T01 |
Gene Sequence |
Protein sequence |