AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015444.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015444.01.T01 MTR_3g070180 99.676 309 1 0 1 309 1 309 0.0 624
MsG0380015444.01.T01 MTR_5g081980 95.146 309 15 0 1 309 1 309 0.0 600
MsG0380015444.01.T01 MTR_3g070190 33.210 271 164 6 19 285 25 282 2.81e-35 129
MsG0380015444.01.T01 MTR_5g082000 31.206 282 177 6 8 285 10 278 1.18e-31 119
MsG0380015444.01.T01 MTR_3g009270 25.574 305 189 6 10 285 4 299 1.01e-22 96.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015444.01.T01 AT5G05780 88.961 308 34 0 1 308 1 308 0.0 572
MsG0380015444.01.T01 AT3G11270 88.852 305 34 0 1 305 1 305 0.0 566
MsG0380015444.01.T01 AT5G05780 87.987 308 34 1 1 308 1 305 0.0 561
MsG0380015444.01.T01 AT3G11270 87.869 305 34 1 1 305 1 302 0.0 554
MsG0380015444.01.T01 AT2G39990 28.807 243 156 6 10 248 21 250 5.11e-26 105
MsG0380015444.01.T01 AT4G26430 24.606 317 200 7 10 296 4 311 5.15e-22 94.4
MsG0380015444.01.T01 AT5G56280 23.885 314 200 7 10 295 4 306 6.38e-21 91.7

Find 99 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCTTGATCTTGTTATTGA+TGG 0.232829 3:-70268372 MsG0380015444.01.T01:CDS
GTATAGGATCTCATGGTTTA+AGG 0.233509 3:+70268341 None:intergenic
ATTATAACCAAAACGGGATT+TGG 0.243791 3:+70269111 None:intergenic
TCCATGTTTAAGAGAATAAA+TGG 0.261453 3:-70269587 MsG0380015444.01.T01:intron
AACACGCTTGCGAGTATCTT+TGG 0.301893 3:+70271637 None:intergenic
GCTCATGAGGTTGAGGAAAT+AGG 0.315086 3:-70268824 MsG0380015444.01.T01:intron
GCACATGCACAAAGACCTTT+TGG 0.348447 3:+70268861 None:intergenic
CTATGTTCCAAATCCCGTTT+TGG 0.360839 3:-70269118 MsG0380015444.01.T01:CDS
GTTGGAATTCCCAACTCCTT+AGG 0.364240 3:+70269078 None:intergenic
CGGTCTTGAGCATTTCTGAT+AGG 0.370259 3:-70267562 MsG0380015444.01.T01:three_prime_UTR
TAGATTTCTCTGTTCTTTCT+CGG 0.370842 3:+70271778 None:intergenic
CTCGGTTGCAAGGGTGCTAA+TGG 0.377226 3:+70268624 None:intergenic
CTGCTCGCGTGTTAACTTGA+TGG 0.381299 3:+70267346 None:intergenic
TCTTGCATCCAAACCTTTCA+AGG 0.385551 3:+70268413 None:intergenic
ATCCGAACCAGCGTAGCTAT+TGG 0.391771 3:+70271568 None:intergenic
ACATCAATTATAACCAAAAC+GGG 0.396892 3:+70269105 None:intergenic
GATACTCGCAAGCGTGTTGT+CGG 0.410026 3:-70271632 MsG0380015444.01.T01:CDS
AGATCAGAGACATTGAGATT+TGG 0.417947 3:+70268070 None:intergenic
ACTCACGGCCTTGAAAGGTT+TGG 0.421231 3:-70268421 MsG0380015444.01.T01:CDS
GCGGTGACTGGTTTGGTTAG+TGG 0.424106 3:-70271843 MsG0380015444.01.T01:five_prime_UTR
ATGACAAGGACCCTAGCATT+TGG 0.429351 3:-70269643 MsG0380015444.01.T01:CDS
GCTGCACTTGGTACTGGTGC+TGG 0.431498 3:+70267678 None:intergenic
AACATCAATTATAACCAAAA+CGG 0.431934 3:+70269104 None:intergenic
AAATACAGCGGTGACTGGTT+TGG 0.439247 3:-70271850 MsG0380015444.01.T01:five_prime_UTR
AGACATTGAGATTTGGTAGC+AGG 0.443560 3:+70268077 None:intergenic
TCCTTGTCATCTTCTTCAAA+AGG 0.445298 3:+70269656 None:intergenic
GAAAATGACCTCGACATTCA+TGG 0.450178 3:-70269440 MsG0380015444.01.T01:CDS
CAGGAGTGGAACACTTGCTC+AGG 0.452480 3:-70268663 MsG0380015444.01.T01:CDS
GATGTTGAACCTAAGGAGTT+GGG 0.454883 3:-70269087 MsG0380015444.01.T01:CDS
TTGCTTGGTTCTACTTTCAA+AGG 0.455683 3:-70271605 MsG0380015444.01.T01:CDS
TAAACTAAGAAAATGATCAT+AGG 0.457163 3:+70267457 None:intergenic
TGCAATGGGCTGAGCTCTAA+AGG 0.466972 3:-70267636 MsG0380015444.01.T01:three_prime_UTR
AAGAATCTATTATCAACAAA+TGG 0.468871 3:-70267424 MsG0380015444.01.T01:three_prime_UTR
GTACCAAGTGCAGCTGCATA+AGG 0.470014 3:-70267669 MsG0380015444.01.T01:exon
TGATGTTGAACCTAAGGAGT+TGG 0.470055 3:-70269088 MsG0380015444.01.T01:CDS
TATAGGATCTCATGGTTTAA+GGG 0.477057 3:+70268342 None:intergenic
TATGCAGCTGCACTTGGTAC+TGG 0.477744 3:+70267672 None:intergenic
TATAATTGATGTTGAACCTA+AGG 0.485322 3:-70269094 MsG0380015444.01.T01:CDS
AACAAACCTGCAGATGGTAT+AGG 0.490745 3:+70268325 None:intergenic
GTGGTGGGGTGGTATAGCAC+TGG 0.497402 3:-70269476 MsG0380015444.01.T01:CDS
CTATTATCAACAAATGGATA+AGG 0.498757 3:-70267418 MsG0380015444.01.T01:three_prime_UTR
AGGCACTATGATTGATTCCA+TGG 0.502013 3:-70267616 MsG0380015444.01.T01:three_prime_UTR
AAGGTTTCGACGATTGCAAT+GGG 0.503074 3:-70267650 MsG0380015444.01.T01:three_prime_UTR
AAGCAAAATACAGCGGTGAC+TGG 0.509604 3:-70271855 MsG0380015444.01.T01:five_prime_UTR
TTCCATCAATAACAAGATCA+AGG 0.509830 3:+70268370 None:intergenic
AAACCTTATGCAGCTGCACT+TGG 0.510034 3:+70267666 None:intergenic
CAATGTCTCTGATCTTATCA+AGG 0.514069 3:-70268062 MsG0380015444.01.T01:CDS
GGTCTTGAGCATTTCTGATA+GGG 0.516287 3:-70267561 MsG0380015444.01.T01:three_prime_UTR
TGCTGTTGAGGAGGTTAAAG+AGG 0.520637 3:-70269043 MsG0380015444.01.T01:intron
TGGTCGAGAAACCAAATGCT+AGG 0.522788 3:+70269632 None:intergenic
TGCTCAACAAAGAACATGAA+AGG 0.527873 3:-70267716 MsG0380015444.01.T01:CDS
GATTGCTGCTCATGAGGTTG+AGG 0.529652 3:-70268831 MsG0380015444.01.T01:CDS
CCTTGTTGTTAATCAAGTTG+TGG 0.533219 3:+70267881 None:intergenic
ATGCAAGACTTAAAGAGATA+AGG 0.533289 3:-70268398 MsG0380015444.01.T01:CDS
GGAAAACTCACGGCCTTGAA+AGG 0.535505 3:-70268426 MsG0380015444.01.T01:CDS
ACCATTTATTCTCTTAAACA+TGG 0.539672 3:+70269586 None:intergenic
CTATGATTGATTCCATGGAC+CGG 0.543056 3:-70267611 MsG0380015444.01.T01:three_prime_UTR
AAAATGACCTCGACATTCAT+GGG 0.547978 3:-70269439 MsG0380015444.01.T01:CDS
AATGTAATAATCCCGGTCCA+TGG 0.548731 3:+70267599 None:intergenic
TAAGGTTTCGACGATTGCAA+TGG 0.549840 3:-70267651 MsG0380015444.01.T01:three_prime_UTR
TGCTACTCAGAAAAGCCAAA+AGG 0.554388 3:-70268876 MsG0380015444.01.T01:CDS
GCTCAACAAAGAACATGAAA+GGG 0.556354 3:-70267715 MsG0380015444.01.T01:CDS
TTGGTTAGTGGTGTTGCAGA+GGG 0.558101 3:-70271831 MsG0380015444.01.T01:five_prime_UTR
TGAGATCCTATACCATCTGC+AGG 0.565146 3:-70268331 MsG0380015444.01.T01:intron
TACAGCAAAGGAGCATGTGG+TGG 0.565219 3:-70269492 MsG0380015444.01.T01:intron
CAATTAAAATGTAATAATCC+CGG 0.569283 3:+70267592 None:intergenic
GATGTTTCCAATAGCTACGC+TGG 0.569599 3:-70271575 MsG0380015444.01.T01:intron
TATGATTGATTCCATGGACC+GGG 0.571204 3:-70267610 MsG0380015444.01.T01:three_prime_UTR
ACAGCAAAGGAGCATGTGGT+GGG 0.572446 3:-70269491 MsG0380015444.01.T01:intron
GCAGATGGTATAGGATCTCA+TGG 0.574067 3:+70268334 None:intergenic
AAAAGCATACTATGCTGTTG+AGG 0.577045 3:-70269055 MsG0380015444.01.T01:CDS
ACGTTCGATCGAGAAGGTGG+TGG 0.579416 3:-70271708 MsG0380015444.01.T01:CDS
ATCACGTTCGATCGAGAAGG+TGG 0.579469 3:-70271711 MsG0380015444.01.T01:CDS
CATTAGCACCCTTGCAACCG+AGG 0.585610 3:-70268623 MsG0380015444.01.T01:intron
ACACTTGCTCAGGGATGTGA+AGG 0.595095 3:-70268653 MsG0380015444.01.T01:CDS
CTCATCACGTTCGATCGAGA+AGG 0.595224 3:-70271714 MsG0380015444.01.T01:CDS
CAAAGGAGCATGTGGTGGGG+TGG 0.599420 3:-70269487 MsG0380015444.01.T01:CDS
ACATACAGAAATTAAGCGCA+CGG 0.599520 3:+70267491 None:intergenic
ATGAGAAACAAACCTGCAGA+TGG 0.599707 3:+70268319 None:intergenic
CCACAACTTGATTAACAACA+AGG 0.604169 3:-70267881 MsG0380015444.01.T01:intron
GAAAACGAATGATATGATGC+TGG 0.610132 3:-70267944 MsG0380015444.01.T01:CDS
CGCGTGTTAACTTGATGGAA+AGG 0.611327 3:+70267351 None:intergenic
TTTGGTTAGTGGTGTTGCAG+AGG 0.612079 3:-70271832 MsG0380015444.01.T01:five_prime_UTR
AGCATACTATGCTGTTGAGG+AGG 0.622035 3:-70269052 MsG0380015444.01.T01:CDS
ATAGGTGAGCGGAAAACTCA+CGG 0.624628 3:-70268436 MsG0380015444.01.T01:intron
ATCAGAGATTGCTGCTCATG+AGG 0.625160 3:-70268837 MsG0380015444.01.T01:CDS
CATACAGAAATTAAGCGCAC+GGG 0.627305 3:+70267492 None:intergenic
GGTCGAGAAACCAAATGCTA+GGG 0.629605 3:+70269633 None:intergenic
TCTAAGCTTCGAATTCGCCA+TGG 0.637825 3:-70271759 MsG0380015444.01.T01:exon
GTTTACAGCAAAGGAGCATG+TGG 0.644927 3:-70269495 MsG0380015444.01.T01:intron
TAAATAACCCATGAATGTCG+AGG 0.645744 3:+70269432 None:intergenic
ACATTGCTTCGTGATAATTG+TGG 0.656481 3:+70269612 None:intergenic
CACTTCTAATGAGAGACGAT+AGG 0.662773 3:+70267914 None:intergenic
AGGAGTGGAACACTTGCTCA+GGG 0.663636 3:-70268662 MsG0380015444.01.T01:CDS
GTAGCTATTGGAAACATCAA+CGG 0.667938 3:+70271580 None:intergenic
ACGATGCTGAGCAACACTAG+AGG 0.680391 3:+70271680 None:intergenic
GTAGAGAAATACAAGTAACA+TGG 0.685930 3:-70267539 MsG0380015444.01.T01:three_prime_UTR
CAGCAAAGGAGCATGTGGTG+GGG 0.698587 3:-70269490 MsG0380015444.01.T01:CDS
ACGTTGTGTAGTTAACAATG+AGG 0.702991 3:-70267298 MsG0380015444.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTTGTAAATTTAG+TGG - Chr3:70269840-70269859 MsG0380015444.01.T01:intron 10.0%
!! AATTACTTCAAATATAAATT+TGG - Chr3:70269384-70269403 MsG0380015444.01.T01:intron 10.0%
!!! AAGTTTAATAATTTTATCAT+GGG + Chr3:70270167-70270186 None:intergenic 10.0%
!!! ACTAAATTTACAAATATTTT+TGG + Chr3:70269841-70269860 None:intergenic 10.0%
!!! CTAAATTTACAAATATTTTT+GGG + Chr3:70269840-70269859 None:intergenic 10.0%
!! AAAAAAGAAAATACATTTAC+TGG + Chr3:70268637-70268656 None:intergenic 15.0%
!! AATAAATAAGAATCTGTTTA+AGG + Chr3:70270577-70270596 None:intergenic 15.0%
!! TTTAAATTATTTATGTGAAG+AGG - Chr3:70267763-70267782 MsG0380015444.01.T01:intron 15.0%
!!! GAAGTTTAATAATTTTATCA+TGG + Chr3:70270168-70270187 None:intergenic 15.0%
!!! TATTTTGTTTGTTTTTACTT+GGG - Chr3:70270409-70270428 MsG0380015444.01.T01:intron 15.0%
!!! TTATTTTGTTTGTTTTTACT+TGG - Chr3:70270408-70270427 MsG0380015444.01.T01:intron 15.0%
!!! TTTTTACATAAAACAAAATC+AGG + Chr3:70267838-70267857 None:intergenic 15.0%
!! AAAAATAAAGCAAAATACAG+CGG - Chr3:70267302-70267321 MsG0380015444.01.T01:three_prime_UTR 20.0%
!! AAAGAAATTGCTAATAACTA+TGG + Chr3:70268835-70268854 None:intergenic 20.0%
!! AACAAAATAAAAATGAACCA+TGG + Chr3:70270398-70270417 None:intergenic 20.0%
!! AACATCAATTATAACCAAAA+CGG + Chr3:70270063-70270082 None:intergenic 20.0%
!! AAGAAATTGCTAATAACTAT+GGG + Chr3:70268834-70268853 None:intergenic 20.0%
!! AAGAATCTATTATCAACAAA+TGG - Chr3:70271740-70271759 MsG0380015444.01.T01:CDS 20.0%
!! AATATTTGTAAATTTAGTGG+CGG - Chr3:70269843-70269862 MsG0380015444.01.T01:intron 20.0%
!! AATTATTTCACACATTCAAT+TGG + Chr3:70269368-70269387 None:intergenic 20.0%
!! ATATTAAGGAATCAATGTAA+GGG + Chr3:70268581-70268600 None:intergenic 20.0%
!! CAAAATATACAAAGAAATGT+AGG + Chr3:70268430-70268449 None:intergenic 20.0%
!! CAAGACTAAAAAAACAAATA+AGG + Chr3:70268919-70268938 None:intergenic 20.0%
!! CAATTAAAATGTAATAATCC+CGG + Chr3:70271575-70271594 None:intergenic 20.0%
!! TAAACTAAGAAAATGATCAT+AGG + Chr3:70271710-70271729 None:intergenic 20.0%
!!! AGAGATTGTTTTATGAAAAA+AGG + Chr3:70270619-70270638 None:intergenic 20.0%
!!! AGCTTTTATATATATTGCTT+TGG - Chr3:70268390-70268409 MsG0380015444.01.T01:CDS 20.0%
!!! ATAATTTTATCATGGGTATA+AGG + Chr3:70270160-70270179 None:intergenic 20.0%
!!! CTACATTTCTTTGTATATTT+TGG - Chr3:70268428-70268447 MsG0380015444.01.T01:CDS 20.0%
!!! TAATGTATTCTTCTCTATTT+TGG - Chr3:70268781-70268800 MsG0380015444.01.T01:intron 20.0%
!!! TAATTTTATCATGGGTATAA+GGG + Chr3:70270159-70270178 None:intergenic 20.0%
!!! TACATTTTAATTGCATTTGT+CGG - Chr3:70271582-70271601 MsG0380015444.01.T01:CDS 20.0%
!!! TTATTTATCTTTGCTGATTT+TGG - Chr3:70271339-70271358 MsG0380015444.01.T01:intron 20.0%
! AATACTCAAACTAAAACCAT+AGG - Chr3:70268261-70268280 MsG0380015444.01.T01:intron 25.0%
! AATTACAGCAAGAAATTAGA+TGG + Chr3:70271050-70271069 None:intergenic 25.0%
! ACATCAATTATAACCAAAAC+GGG + Chr3:70270062-70270081 None:intergenic 25.0%
! ACCATTTATTCTCTTAAACA+TGG + Chr3:70269581-70269600 None:intergenic 25.0%
! ACTAACGATTTATTTCAAGA+AGG - Chr3:70268048-70268067 MsG0380015444.01.T01:intron 25.0%
! AGTTATTAGCAATTTCTTTG+AGG - Chr3:70268836-70268855 MsG0380015444.01.T01:CDS 25.0%
! ATGTACTTTCGTACTTATTA+AGG + Chr3:70268698-70268717 None:intergenic 25.0%
! ATTACAGCAAGAAATTAGAT+GGG + Chr3:70271049-70271068 None:intergenic 25.0%
! ATTCCACTAAGAATAAACAT+TGG + Chr3:70269056-70269075 None:intergenic 25.0%
! ATTGTATATCTCTGACTAAT+TGG - Chr3:70269468-70269487 MsG0380015444.01.T01:CDS 25.0%
! CATATTAAATACTAATCCCT+AGG - Chr3:70270875-70270894 MsG0380015444.01.T01:intron 25.0%
! CTAATGCAGATACTATAAAA+GGG - Chr3:70268196-70268215 MsG0380015444.01.T01:intron 25.0%
! CTATTATCAACAAATGGATA+AGG - Chr3:70271746-70271765 MsG0380015444.01.T01:exon 25.0%
! GATATTAAGGAATCAATGTA+AGG + Chr3:70268582-70268601 None:intergenic 25.0%
! TAATGCAGATACTATAAAAG+GGG - Chr3:70268197-70268216 MsG0380015444.01.T01:intron 25.0%
! TATAATTGATGTTGAACCTA+AGG - Chr3:70270070-70270089 MsG0380015444.01.T01:intron 25.0%
! TCCATGTTTAAGAGAATAAA+TGG - Chr3:70269577-70269596 MsG0380015444.01.T01:intron 25.0%
! TGAAATAAATCGTTAGTACT+AGG + Chr3:70268045-70268064 None:intergenic 25.0%
! TGTTTAGATCAGATATTCAA+TGG + Chr3:70269643-70269662 None:intergenic 25.0%
! TTTAAGGAGAAAAAAAACCT+CGG + Chr3:70270561-70270580 None:intergenic 25.0%
!! AGATTCAGTATCATGAATTT+TGG - Chr3:70271308-70271327 MsG0380015444.01.T01:intron 25.0%
!! AGATTTGACCAATTTTACAT+TGG + Chr3:70268983-70269002 None:intergenic 25.0%
!! ATTGATTCCTTAATATCATG+AGG - Chr3:70268585-70268604 MsG0380015444.01.T01:intron 25.0%
!!! AATCAATGTAAGGGTATTTT+TGG + Chr3:70268572-70268591 None:intergenic 25.0%
!!! ATTTCTTGCTGTAATTTGTT+AGG - Chr3:70271054-70271073 MsG0380015444.01.T01:intron 25.0%
AAAAACGACTCTTCTGTATA+TGG - Chr3:70270213-70270232 MsG0380015444.01.T01:intron 30.0%
AACAATCTAGAAGAGACATT+CGG + Chr3:70271177-70271196 None:intergenic 30.0%
AATGCAGATACTATAAAAGG+GGG - Chr3:70268198-70268217 MsG0380015444.01.T01:intron 30.0%
AATTTGGATAGAGATTGATC+CGG + Chr3:70270003-70270022 None:intergenic 30.0%
ACAAACAATGTTTACAGCAA+AGG - Chr3:70269660-70269679 MsG0380015444.01.T01:CDS 30.0%
ACGATTTATTTCAAGAAGGT+AGG - Chr3:70268052-70268071 MsG0380015444.01.T01:intron 30.0%
AGAGAATAAATGGTATGAGT+TGG - Chr3:70269587-70269606 MsG0380015444.01.T01:intron 30.0%
AGGAGATAACCATTATAATC+AGG - Chr3:70268605-70268624 MsG0380015444.01.T01:intron 30.0%
AGTGAGTATATGGTATGATA+TGG - Chr3:70268742-70268761 MsG0380015444.01.T01:intron 30.0%
ATAAATCGTTAGTACTAGGT+CGG + Chr3:70268041-70268060 None:intergenic 30.0%
ATACAAAGAAATGTAGGTCT+TGG + Chr3:70268424-70268443 None:intergenic 30.0%
ATGAATTGAACCTAACTTCA+TGG - Chr3:70267874-70267893 MsG0380015444.01.T01:intron 30.0%
ATGCAAGACTTAAAGAGATA+AGG - Chr3:70270766-70270785 MsG0380015444.01.T01:intron 30.0%
ATTATAACCAAAACGGGATT+TGG + Chr3:70270056-70270075 None:intergenic 30.0%
ATTGAAACATTACTTCACAC+AGG + Chr3:70269783-70269802 None:intergenic 30.0%
CATCCAATGTTTATTCTTAG+TGG - Chr3:70269050-70269069 MsG0380015444.01.T01:CDS 30.0%
CCTAATGCAGATACTATAAA+AGG - Chr3:70268195-70268214 MsG0380015444.01.T01:intron 30.0%
GAGATAACCATTATAATCAG+GGG - Chr3:70268607-70268626 MsG0380015444.01.T01:intron 30.0%
GAGATATTAAAGCCTAAATG+GGG + Chr3:70269818-70269837 None:intergenic 30.0%
GGAGATAACCATTATAATCA+GGG - Chr3:70268606-70268625 MsG0380015444.01.T01:intron 30.0%
GGAGATATTAAAGCCTAAAT+GGG + Chr3:70269819-70269838 None:intergenic 30.0%
GTAGAGAAATACAAGTAACA+TGG - Chr3:70271625-70271644 MsG0380015444.01.T01:CDS 30.0%
GTGAAAATGTTGTCATGATT+TGG - Chr3:70269890-70269909 MsG0380015444.01.T01:intron 30.0%
GTTATCTCCTCATGATATTA+AGG + Chr3:70268595-70268614 None:intergenic 30.0%
TAGATTTCTCTGTTCTTTCT+CGG + Chr3:70267389-70267408 None:intergenic 30.0%
TATAGGATCTCATGGTTTAA+GGG + Chr3:70270825-70270844 None:intergenic 30.0%
TATCCAAATTGATCATGCTT+TGG - Chr3:70270013-70270032 MsG0380015444.01.T01:intron 30.0%
TCAACAACCAACATAAAACT+TGG - Chr3:70269121-70269140 MsG0380015444.01.T01:CDS 30.0%
TCTTTAACTGTTCAGTATGA+TGG - Chr3:70269002-70269021 MsG0380015444.01.T01:intron 30.0%
TTACAGCAAGAAATTAGATG+GGG + Chr3:70271048-70271067 None:intergenic 30.0%
TTCCATCAATAACAAGATCA+AGG + Chr3:70270797-70270816 None:intergenic 30.0%
TTCTATATGTTGCTGCTATT+GGG - Chr3:70269932-70269951 MsG0380015444.01.T01:intron 30.0%
TTTATTTCAAGAAGGTAGGA+CGG - Chr3:70268056-70268075 MsG0380015444.01.T01:CDS 30.0%
TTTCTATATGTTGCTGCTAT+TGG - Chr3:70269931-70269950 MsG0380015444.01.T01:intron 30.0%
! ATCATGACAACATTTTCACA+AGG + Chr3:70269889-70269908 None:intergenic 30.0%
! CATTTTATGAGACAACTTGT+GGG + Chr3:70268458-70268477 None:intergenic 30.0%
! CCTTTTATAGTATCTGCATT+AGG + Chr3:70268198-70268217 None:intergenic 30.0%
! TCATGACAACATTTTCACAA+GGG + Chr3:70269888-70269907 None:intergenic 30.0%
!! AAATGTTGTCATGATTTGGT+TGG - Chr3:70269894-70269913 MsG0380015444.01.T01:intron 30.0%
!! AACATTTTCACAAGGGTATA+AGG + Chr3:70269881-70269900 None:intergenic 30.0%
!! ACATTTTCACAAGGGTATAA+GGG + Chr3:70269880-70269899 None:intergenic 30.0%
!! ACTTAGCCTTGCTAAAATTA+GGG + Chr3:70267704-70267723 None:intergenic 30.0%
!! GATTGAACCAAGTTTTATGT+TGG + Chr3:70269131-70269150 None:intergenic 30.0%
!! TACCTTGATCTTGTTATTGA+TGG - Chr3:70270792-70270811 MsG0380015444.01.T01:intron 30.0%
!! TACTTAGCCTTGCTAAAATT+AGG + Chr3:70267705-70267724 None:intergenic 30.0%
!! TTTGAGTATTGAGTGTGTAA+TGG + Chr3:70268251-70268270 None:intergenic 30.0%
!!! CTGATTTTGGCTCTATATTT+AGG - Chr3:70271352-70271371 MsG0380015444.01.T01:intron 30.0%
AAAAAAAACCTCGGTTGCAA+GGG + Chr3:70270552-70270571 None:intergenic 35.0%
AAAATGACCTCGACATTCAT+GGG - Chr3:70269725-70269744 MsG0380015444.01.T01:intron 35.0%
AACCATGAGACATAAATGGA+TGG - Chr3:70270959-70270978 MsG0380015444.01.T01:intron 35.0%
AACTAATAGAAGCCCAAATG+TGG + Chr3:70269244-70269263 None:intergenic 35.0%
AATTCTTCTTATCCTTGTGC+AGG - Chr3:70270482-70270501 MsG0380015444.01.T01:intron 35.0%
ACATACAGAAATTAAGCGCA+CGG + Chr3:70271676-70271695 None:intergenic 35.0%
ACATTGCTTCGTGATAATTG+TGG + Chr3:70269555-70269574 None:intergenic 35.0%
ACGAAGGATAGAATATTCCT+TGG - Chr3:70268119-70268138 MsG0380015444.01.T01:intron 35.0%
ACGTTGTGTAGTTAACAATG+AGG - Chr3:70271866-70271885 MsG0380015444.01.T01:five_prime_UTR 35.0%
AGACAATAATGCAAGTGAAG+AGG + Chr3:70269962-70269981 None:intergenic 35.0%
AGATCAGAGACATTGAGATT+TGG + Chr3:70271097-70271116 None:intergenic 35.0%
AGGAATATTCTATCCTTCGT+TGG + Chr3:70268119-70268138 None:intergenic 35.0%
AGTCCAAAGCATGATCAATT+TGG + Chr3:70270019-70270038 None:intergenic 35.0%
ATGTTCAGCAAGCAACTATA+TGG + Chr3:70270448-70270467 None:intergenic 35.0%
ATTTGGATAGAGATTGATCC+GGG + Chr3:70270002-70270021 None:intergenic 35.0%
CAAACCAGCCTTAAATATCA+GGG - Chr3:70268284-70268303 MsG0380015444.01.T01:intron 35.0%
CAATGTCTCTGATCTTATCA+AGG - Chr3:70271102-70271121 MsG0380015444.01.T01:intron 35.0%
CCACAAGTTGTCTCATAAAA+TGG - Chr3:70268456-70268475 MsG0380015444.01.T01:intron 35.0%
CGAAGGATAGAATATTCCTT+GGG - Chr3:70268120-70268139 MsG0380015444.01.T01:intron 35.0%
GAAAACGAATGATATGATGC+TGG - Chr3:70271220-70271239 MsG0380015444.01.T01:intron 35.0%
GATGGTTGAAATGTTTCGTT+AGG - Chr3:70269095-70269114 MsG0380015444.01.T01:CDS 35.0%
GCTCAACAAAGAACATGAAA+GGG - Chr3:70271449-70271468 MsG0380015444.01.T01:intron 35.0%
GGGAGATATTAAAGCCTAAA+TGG + Chr3:70269820-70269839 None:intergenic 35.0%
GTAGCTATTGGAAACATCAA+CGG + Chr3:70267587-70267606 None:intergenic 35.0%
GTATAGGATCTCATGGTTTA+AGG + Chr3:70270826-70270845 None:intergenic 35.0%
GTTGGCAACCAATGTAAAAT+TGG - Chr3:70268972-70268991 MsG0380015444.01.T01:intron 35.0%
TAAATAACCCATGAATGTCG+AGG + Chr3:70269735-70269754 None:intergenic 35.0%
TACAGCAAGAAATTAGATGG+GGG + Chr3:70271047-70271066 None:intergenic 35.0%
TCCTTGTCATCTTCTTCAAA+AGG + Chr3:70269511-70269530 None:intergenic 35.0%
TCTTTACCTTTACCCCATTT+AGG - Chr3:70269803-70269822 MsG0380015444.01.T01:intron 35.0%
TGCTCAACAAAGAACATGAA+AGG - Chr3:70271448-70271467 MsG0380015444.01.T01:intron 35.0%
TGTCAACCATGAGACATAAA+TGG - Chr3:70270955-70270974 MsG0380015444.01.T01:intron 35.0%
TGTTCTATGTGATGACTGAA+GGG - Chr3:70268937-70268956 MsG0380015444.01.T01:intron 35.0%
TTAAAGCCTAAATGGGGTAA+AGG + Chr3:70269812-70269831 None:intergenic 35.0%
TTCCATCCATTTATGTCTCA+TGG + Chr3:70270964-70270983 None:intergenic 35.0%
TTGTTCTATGTGATGACTGA+AGG - Chr3:70268936-70268955 MsG0380015444.01.T01:intron 35.0%
! AAAAGCATACTATGCTGTTG+AGG - Chr3:70270109-70270128 MsG0380015444.01.T01:intron 35.0%
! AACCATTTTGTGACAACTTG+TGG + Chr3:70268487-70268506 None:intergenic 35.0%
! ACAGCATAGTATGCTTTTGT+TGG + Chr3:70270107-70270126 None:intergenic 35.0%
! ACCATTTTGTGACAACTTGT+GGG + Chr3:70268486-70268505 None:intergenic 35.0%
! AGAACTTCTGCAATTTTCCA+TGG - Chr3:70270378-70270397 MsG0380015444.01.T01:intron 35.0%
! CCATTTTATGAGACAACTTG+TGG + Chr3:70268459-70268478 None:intergenic 35.0%
! TACGCTGTAGCTTTTTACAT+AGG - Chr3:70270710-70270729 MsG0380015444.01.T01:intron 35.0%
! TAGCTTTTTACATAGGTGAG+CGG - Chr3:70270717-70270736 MsG0380015444.01.T01:intron 35.0%
! TGTGTTCTAAACCAGAACAT+TGG - Chr3:70268321-70268340 MsG0380015444.01.T01:intron 35.0%
! TTGAAGGGTTTTCTTAGCTT+TGG - Chr3:70269174-70269193 MsG0380015444.01.T01:intron 35.0%
! TTGAGTCTAGAGTGAGTATA+TGG - Chr3:70268732-70268751 MsG0380015444.01.T01:intron 35.0%
! TTGCGTTTTTATCACATCCA+TGG + Chr3:70267425-70267444 None:intergenic 35.0%
!! TGTATGACAGTTTTGTGTGA+TGG - Chr3:70269077-70269096 MsG0380015444.01.T01:CDS 35.0%
!! TTGCTTGGTTCTACTTTCAA+AGG - Chr3:70267559-70267578 MsG0380015444.01.T01:three_prime_UTR 35.0%
!! TTTGTGCCCTAATTTTAGCA+AGG - Chr3:70267695-70267714 MsG0380015444.01.T01:CDS 35.0%
AACAAACCTGCAGATGGTAT+AGG + Chr3:70270842-70270861 None:intergenic 40.0%
AAGGTTTCGACGATTGCAAT+GGG - Chr3:70271514-70271533 MsG0380015444.01.T01:intron 40.0%
AATGTAATAATCCCGGTCCA+TGG + Chr3:70271568-70271587 None:intergenic 40.0%
ACAGATGTAGGGACTGAATT+AGG - Chr3:70267976-70267995 MsG0380015444.01.T01:intron 40.0%
ACAGCAAGAAATTAGATGGG+GGG + Chr3:70271046-70271065 None:intergenic 40.0%
ACCCACACTTCATATGGATT+TGG - Chr3:70268143-70268162 MsG0380015444.01.T01:intron 40.0%
ACGACTCTTCTGTATATGGA+CGG - Chr3:70270217-70270236 MsG0380015444.01.T01:intron 40.0%
AGTTCTGTGTGATGGTTGAA+GGG - Chr3:70269159-70269178 MsG0380015444.01.T01:intron 40.0%
ATCCTTCGTTGGCAATGATT+AGG + Chr3:70268108-70268127 None:intergenic 40.0%
ATGAGAAACAAACCTGCAGA+TGG + Chr3:70270848-70270867 None:intergenic 40.0%
ATGGTTGACAATTAGAGGTG+GGG + Chr3:70270945-70270964 None:intergenic 40.0%
CAACTCAGTAAACAGATCAG+TGG + Chr3:70269340-70269359 None:intergenic 40.0%
CACTGATCTGTTTACTGAGT+TGG - Chr3:70269338-70269357 MsG0380015444.01.T01:intron 40.0%
CACTTCTAATGAGAGACGAT+AGG + Chr3:70271253-70271272 None:intergenic 40.0%
CATACAGAAATTAAGCGCAC+GGG + Chr3:70271675-70271694 None:intergenic 40.0%
CATGGTTGACAATTAGAGGT+GGG + Chr3:70270946-70270965 None:intergenic 40.0%
CCACACTTCATATGGATTTG+GGG - Chr3:70268145-70268164 MsG0380015444.01.T01:intron 40.0%
CCCAAATCCATATGAAGTGT+GGG + Chr3:70268147-70268166 None:intergenic 40.0%
CCCACACTTCATATGGATTT+GGG - Chr3:70268144-70268163 MsG0380015444.01.T01:intron 40.0%
CTGTTCAGTATGATGGTTGA+AGG - Chr3:70269009-70269028 MsG0380015444.01.T01:intron 40.0%
CTTCAACCATCACACATAAC+TGG + Chr3:70268360-70268379 None:intergenic 40.0%
CTTCGAATTGTTCGTGAATG+TGG - Chr3:70270898-70270917 MsG0380015444.01.T01:intron 40.0%
GAAAAAAAACCTCGGTTGCA+AGG + Chr3:70270553-70270572 None:intergenic 40.0%
GAAAATGACCTCGACATTCA+TGG - Chr3:70269724-70269743 MsG0380015444.01.T01:intron 40.0%
GAAGACAGCTTACCACATTT+GGG - Chr3:70269229-70269248 MsG0380015444.01.T01:intron 40.0%
GATGGGGGGAAAAACAATAA+TGG + Chr3:70271032-70271051 None:intergenic 40.0%
GATGGTTGAAGGATTGTGTT+AGG - Chr3:70269020-70269039 MsG0380015444.01.T01:intron 40.0%
GATGTTGAACCTAAGGAGTT+GGG - Chr3:70270077-70270096 MsG0380015444.01.T01:intron 40.0%
GCAAACCAGCCTTAAATATC+AGG - Chr3:70268283-70268302 MsG0380015444.01.T01:intron 40.0%
GGGATCAGCATTATTTACGT+TGG + Chr3:70270925-70270944 None:intergenic 40.0%
GGTCTTGAGCATTTCTGATA+GGG - Chr3:70271603-70271622 MsG0380015444.01.T01:CDS 40.0%
GTCTCATGGTTGACAATTAG+AGG + Chr3:70270950-70270969 None:intergenic 40.0%
TAAGGTTTCGACGATTGCAA+TGG - Chr3:70271513-70271532 MsG0380015444.01.T01:intron 40.0%
TACACAGAGTAGCAAACATG+TGG + Chr3:70268808-70268827 None:intergenic 40.0%
TCATGGTTGACAATTAGAGG+TGG + Chr3:70270947-70270966 None:intergenic 40.0%
TCCCACAAGTTGTCACAAAA+TGG - Chr3:70268482-70268501 MsG0380015444.01.T01:intron 40.0%
TCTATGACAGTTCTGTGTGA+TGG - Chr3:70269151-70269170 MsG0380015444.01.T01:intron 40.0%
TCTTGCATCCAAACCTTTCA+AGG + Chr3:70270754-70270773 None:intergenic 40.0%
TGAAGACAGCTTACCACATT+TGG - Chr3:70269228-70269247 MsG0380015444.01.T01:intron 40.0%
TGATGTTGAACCTAAGGAGT+TGG - Chr3:70270076-70270095 MsG0380015444.01.T01:intron 40.0%
TGCTACTCAGAAAAGCCAAA+AGG - Chr3:70270288-70270307 MsG0380015444.01.T01:intron 40.0%
TGGTCTACCCCTGATTATAA+TGG + Chr3:70268617-70268636 None:intergenic 40.0%
TTCATCTGTGCTTTGTATCC+CGG - Chr3:70269981-70270000 MsG0380015444.01.T01:intron 40.0%
TTGAGGAGGTTAAAGAGGTA+GGG - Chr3:70270126-70270145 MsG0380015444.01.T01:intron 40.0%
! AGACATTGAGATTTGGTAGC+AGG + Chr3:70271090-70271109 None:intergenic 40.0%
! AGGCACTATGATTGATTCCA+TGG - Chr3:70271548-70271567 MsG0380015444.01.T01:intron 40.0%
! AGGCATCGTTTAGTATGAGA+TGG - Chr3:70268856-70268875 MsG0380015444.01.T01:CDS 40.0%
! ATTTGGGGCTGACAAATGAT+TGG - Chr3:70268160-70268179 MsG0380015444.01.T01:intron 40.0%
! CTATGATTGATTCCATGGAC+CGG - Chr3:70271553-70271572 MsG0380015444.01.T01:intron 40.0%
! CTATGTTCCAAATCCCGTTT+TGG - Chr3:70270046-70270065 MsG0380015444.01.T01:intron 40.0%
! GATCTTATCAAGGCTTTTGC+AGG - Chr3:70271112-70271131 MsG0380015444.01.T01:intron 40.0%
! TATGATTGATTCCATGGACC+GGG - Chr3:70271554-70271573 MsG0380015444.01.T01:intron 40.0%
! TGGTTTAGAACACAGTCCTA+GGG + Chr3:70268315-70268334 None:intergenic 40.0%
!! AAACCACAACAAAGCATTGC+AGG + Chr3:70270659-70270678 None:intergenic 40.0%
!! AACCACAACAAAGCATTGCA+GGG + Chr3:70270658-70270677 None:intergenic 40.0%
!! ATTTAAGGCTGGTTTGCCTA+TGG + Chr3:70268280-70268299 None:intergenic 40.0%
!! GCCTTTTGAAGAAGATGACA+AGG - Chr3:70269507-70269526 MsG0380015444.01.T01:intron 40.0%
AAAAGGGGGACTTTGCTTCT+GGG - Chr3:70268212-70268231 MsG0380015444.01.T01:intron 45.0%
AAACCTTATGCAGCTGCACT+TGG + Chr3:70271501-70271520 None:intergenic 45.0%
AAATATCAGGGCCAAACCCT+AGG - Chr3:70268296-70268315 MsG0380015444.01.T01:intron 45.0%
AACACGCTTGCGAGTATCTT+TGG + Chr3:70267530-70267549 None:intergenic 45.0%
AAGCAAAATACAGCGGTGAC+TGG - Chr3:70267309-70267328 MsG0380015444.01.T01:three_prime_UTR 45.0%
AAGGTAGGACGGACATTACA+TGG - Chr3:70268067-70268086 MsG0380015444.01.T01:CDS 45.0%
ACTCTTCTGTATATGGACGG+TGG - Chr3:70270220-70270239 MsG0380015444.01.T01:intron 45.0%
AGCATACTATGCTGTTGAGG+AGG - Chr3:70270112-70270131 MsG0380015444.01.T01:intron 45.0%
ATAGGTGAGCGGAAAACTCA+CGG - Chr3:70270728-70270747 MsG0380015444.01.T01:intron 45.0%
ATCAGAGATTGCTGCTCATG+AGG - Chr3:70270327-70270346 MsG0380015444.01.T01:intron 45.0%
ATGACAAGGACCCTAGCATT+TGG - Chr3:70269521-70269540 MsG0380015444.01.T01:intron 45.0%
CACGAACAATTCGAAGCCTA+GGG + Chr3:70270894-70270913 None:intergenic 45.0%
CAGAGATTCGACCAATGTTC+TGG + Chr3:70268335-70268354 None:intergenic 45.0%
CAGTTCTGTGTGATGGTTGA+AGG - Chr3:70269158-70269177 MsG0380015444.01.T01:intron 45.0%
CCCCAAATCCATATGAAGTG+TGG + Chr3:70268148-70268167 None:intergenic 45.0%
CCTAACTTCATGGCTCAAAG+CGG - Chr3:70267884-70267903 MsG0380015444.01.T01:CDS 45.0%
CGGTCTTGAGCATTTCTGAT+AGG - Chr3:70271602-70271621 MsG0380015444.01.T01:CDS 45.0%
CTCTTCTGTATATGGACGGT+GGG - Chr3:70270221-70270240 MsG0380015444.01.T01:intron 45.0%
GATGACTGAAGGGTTGTGTT+AGG - Chr3:70268947-70268966 MsG0380015444.01.T01:intron 45.0%
GATGTTTCCAATAGCTACGC+TGG - Chr3:70267589-70267608 MsG0380015444.01.T01:three_prime_UTR 45.0%
GCAGATGGTATAGGATCTCA+TGG + Chr3:70270833-70270852 None:intergenic 45.0%
GCTCATGAGGTTGAGGAAAT+AGG - Chr3:70270340-70270359 MsG0380015444.01.T01:intron 45.0%
GGCAATGATTAGGCATAGCA+CGG + Chr3:70268098-70268117 None:intergenic 45.0%
GGCTGACAAATGATTGGAAG+AGG - Chr3:70268166-70268185 MsG0380015444.01.T01:intron 45.0%
GGGTTCCTATGCCCTTTATT+GGG + Chr3:70267917-70267936 None:intergenic 45.0%
GGGTTTGGCCCTGATATTTA+AGG + Chr3:70268295-70268314 None:intergenic 45.0%
GGTCGAGAAACCAAATGCTA+GGG + Chr3:70269534-70269553 None:intergenic 45.0%
GTTGAGGAGGTTAAAGAGGT+AGG - Chr3:70270125-70270144 MsG0380015444.01.T01:intron 45.0%
GTTGGAATTCCCAACTCCTT+AGG + Chr3:70270089-70270108 None:intergenic 45.0%
TAAAAGGGGGACTTTGCTTC+TGG - Chr3:70268211-70268230 MsG0380015444.01.T01:intron 45.0%
TAAACTGACAAGGTGGAACG+TGG - Chr3:70267952-70267971 MsG0380015444.01.T01:intron 45.0%
TAGAACACAGTCCTAGGGTT+TGG + Chr3:70268310-70268329 None:intergenic 45.0%
TCACGAACAATTCGAAGCCT+AGG + Chr3:70270895-70270914 None:intergenic 45.0%
TCCACCTTGTCAGTTTAGCT+CGG + Chr3:70267949-70267968 None:intergenic 45.0%
TCTAAGCTTCGAATTCGCCA+TGG - Chr3:70267405-70267424 MsG0380015444.01.T01:three_prime_UTR 45.0%
TCTGTGCCAGTTATGTGTGA+TGG - Chr3:70268351-70268370 MsG0380015444.01.T01:CDS 45.0%
TGAGATCCTATACCATCTGC+AGG - Chr3:70270833-70270852 MsG0380015444.01.T01:intron 45.0%
TGCCTAATCATTGCCAACGA+AGG - Chr3:70268103-70268122 MsG0380015444.01.T01:intron 45.0%
TGCTGTTGAGGAGGTTAAAG+AGG - Chr3:70270121-70270140 MsG0380015444.01.T01:intron 45.0%
TGGAACGTGGAACAGATGTA+GGG - Chr3:70267965-70267984 MsG0380015444.01.T01:intron 45.0%
TGGTCGAGAAACCAAATGCT+AGG + Chr3:70269535-70269554 None:intergenic 45.0%
TTCTTATCCTTGTGCAGGAG+TGG - Chr3:70270487-70270506 MsG0380015444.01.T01:intron 45.0%
! AAATACAGCGGTGACTGGTT+TGG - Chr3:70267314-70267333 MsG0380015444.01.T01:three_prime_UTR 45.0%
! AGCATGATGCGACTTGTTTG+TGG - Chr3:70268884-70268903 MsG0380015444.01.T01:intron 45.0%
! CGCGTGTTAACTTGATGGAA+AGG + Chr3:70271816-70271835 None:intergenic 45.0%
! CTGGTTTAGAACACAGTCCT+AGG + Chr3:70268316-70268335 None:intergenic 45.0%
! GATTGCCCAATAAAGGGCAT+AGG - Chr3:70267909-70267928 MsG0380015444.01.T01:CDS 45.0%
! GCACATGCACAAAGACCTTT+TGG + Chr3:70270306-70270325 None:intergenic 45.0%
! GTTTACAGCAAAGGAGCATG+TGG - Chr3:70269669-70269688 MsG0380015444.01.T01:intron 45.0%
! TTCCAATAGCTACGCTGGTT+CGG - Chr3:70267594-70267613 MsG0380015444.01.T01:three_prime_UTR 45.0%
! TTCCCTGCAATGCTTTGTTG+TGG - Chr3:70270653-70270672 MsG0380015444.01.T01:intron 45.0%
! TTGGCCCTGATATTTAAGGC+TGG + Chr3:70268291-70268310 None:intergenic 45.0%
!! AGGTCATTTTCACGCAGCTT+TGG + Chr3:70269715-70269734 None:intergenic 45.0%
!! TTGGTTAGTGGTGTTGCAGA+GGG - Chr3:70267333-70267352 MsG0380015444.01.T01:three_prime_UTR 45.0%
!! TTTGGTTAGTGGTGTTGCAG+AGG - Chr3:70267332-70267351 MsG0380015444.01.T01:three_prime_UTR 45.0%
!! TTCATTATTATATTATATTT+AGG - Chr3:70271376-70271395 MsG0380015444.01.T01:intron 5.0%
AAAGGGGGACTTTGCTTCTG+GGG - Chr3:70268213-70268232 MsG0380015444.01.T01:intron 50.0%
AACTTCATGGCTCAAAGCGG+AGG - Chr3:70267887-70267906 MsG0380015444.01.T01:CDS 50.0%
AAGTGTTCCACTCCTGCACA+AGG + Chr3:70270497-70270516 None:intergenic 50.0%
ACACTTGCTCAGGGATGTGA+AGG - Chr3:70270511-70270530 MsG0380015444.01.T01:intron 50.0%
ACCGAGCTAAACTGACAAGG+TGG - Chr3:70267945-70267964 MsG0380015444.01.T01:CDS 50.0%
ACGACCGAGCTAAACTGACA+AGG - Chr3:70267942-70267961 MsG0380015444.01.T01:CDS 50.0%
ACGATGCTGAGCAACACTAG+AGG + Chr3:70267487-70267506 None:intergenic 50.0%
ACTCACGGCCTTGAAAGGTT+TGG - Chr3:70270743-70270762 MsG0380015444.01.T01:intron 50.0%
AGCGGAGGATTGCCCAATAA+AGG - Chr3:70267902-70267921 MsG0380015444.01.T01:CDS 50.0%
AGGAGTGGAACACTTGCTCA+GGG - Chr3:70270502-70270521 MsG0380015444.01.T01:intron 50.0%
ATCACGTTCGATCGAGAAGG+TGG - Chr3:70267453-70267472 MsG0380015444.01.T01:three_prime_UTR 50.0%
ATCCGAACCAGCGTAGCTAT+TGG + Chr3:70267599-70267618 None:intergenic 50.0%
CAAACACCAGCCCTTGTTAC+TGG - Chr3:70268011-70268030 MsG0380015444.01.T01:intron 50.0%
CATATGAAGTGTGGGTCCCA+AGG + Chr3:70268139-70268158 None:intergenic 50.0%
CTCATCACGTTCGATCGAGA+AGG - Chr3:70267450-70267469 MsG0380015444.01.T01:three_prime_UTR 50.0%
CTTGGGACCCACACTTCATA+TGG - Chr3:70268137-70268156 MsG0380015444.01.T01:intron 50.0%
GAAGGGTTGTGTTAGGCAGT+TGG - Chr3:70268954-70268973 MsG0380015444.01.T01:intron 50.0%
GATACTCGCAAGCGTGTTGT+CGG - Chr3:70267532-70267551 MsG0380015444.01.T01:three_prime_UTR 50.0%
GATTGCTGCTCATGAGGTTG+AGG - Chr3:70270333-70270352 MsG0380015444.01.T01:intron 50.0%
GCGGAGGATTGCCCAATAAA+GGG - Chr3:70267903-70267922 MsG0380015444.01.T01:CDS 50.0%
GGAAAACTCACGGCCTTGAA+AGG - Chr3:70270738-70270757 MsG0380015444.01.T01:intron 50.0%
GGGGTTCCTATGCCCTTTAT+TGG + Chr3:70267918-70267937 None:intergenic 50.0%
GTACCAAGTGCAGCTGCATA+AGG - Chr3:70271495-70271514 MsG0380015444.01.T01:intron 50.0%
GTGGAACGTGGAACAGATGT+AGG - Chr3:70267964-70267983 MsG0380015444.01.T01:intron 50.0%
TATGCAGCTGCACTTGGTAC+TGG + Chr3:70271495-70271514 None:intergenic 50.0%
! ACAGCAAAGGAGCATGTGGT+GGG - Chr3:70269673-70269692 MsG0380015444.01.T01:intron 50.0%
! ATAAAGGGCATAGGAACCCC+TGG - Chr3:70267918-70267937 MsG0380015444.01.T01:CDS 50.0%
! CAGTAACAAGGGCTGGTGTT+TGG + Chr3:70268013-70268032 None:intergenic 50.0%
! CCGCTTTGAGCCATGAAGTT+AGG + Chr3:70267887-70267906 None:intergenic 50.0%
! CTGCTCGCGTGTTAACTTGA+TGG + Chr3:70271821-70271840 None:intergenic 50.0%
! TAAAGGGCATAGGAACCCCT+GGG - Chr3:70267919-70267938 MsG0380015444.01.T01:CDS 50.0%
! TACAGCAAAGGAGCATGTGG+TGG - Chr3:70269672-70269691 MsG0380015444.01.T01:intron 50.0%
!! CGTGTTGTCGGTGTTTTGCT+TGG - Chr3:70267544-70267563 MsG0380015444.01.T01:three_prime_UTR 50.0%
!! GGACTTTGCTTCTGGGGTAA+GGG - Chr3:70268219-70268238 MsG0380015444.01.T01:intron 50.0%
!! TGCAATGGGCTGAGCTCTAA+AGG - Chr3:70271528-70271547 MsG0380015444.01.T01:intron 50.0%
ACGTTCGATCGAGAAGGTGG+TGG - Chr3:70267456-70267475 MsG0380015444.01.T01:three_prime_UTR 55.0%
CACCAGCCCTTGTTACTGGA+CGG - Chr3:70268015-70268034 MsG0380015444.01.T01:intron 55.0%
CAGGAGTGGAACACTTGCTC+AGG - Chr3:70270501-70270520 MsG0380015444.01.T01:intron 55.0%
CATTAGCACCCTTGCAACCG+AGG - Chr3:70270541-70270560 MsG0380015444.01.T01:intron 55.0%
! AGTTTAGCTCGGTCGTCCCA+GGG + Chr3:70267938-70267957 None:intergenic 55.0%
! CAGCAAAGGAGCATGTGGTG+GGG - Chr3:70269674-70269693 MsG0380015444.01.T01:intron 55.0%
!! CTCGGTTGCAAGGGTGCTAA+TGG + Chr3:70270543-70270562 None:intergenic 55.0%
!! GCGGTGACTGGTTTGGTTAG+TGG - Chr3:70267321-70267340 MsG0380015444.01.T01:three_prime_UTR 55.0%
!! GGGACTTTGCTTCTGGGGTA+AGG - Chr3:70268218-70268237 MsG0380015444.01.T01:intron 55.0%
AGGTCGGCCGTCCAGTAACA+AGG + Chr3:70268025-70268044 None:intergenic 60.0%
GGTCGGCCGTCCAGTAACAA+GGG + Chr3:70268024-70268043 None:intergenic 60.0%
! CAAAGGAGCATGTGGTGGGG+TGG - Chr3:70269677-70269696 MsG0380015444.01.T01:intron 60.0%
! CAGTTTAGCTCGGTCGTCCC+AGG + Chr3:70267939-70267958 None:intergenic 60.0%
! GTGGTGGGGTGGTATAGCAC+TGG - Chr3:70269688-70269707 MsG0380015444.01.T01:intron 60.0%
! GTTTAGCTCGGTCGTCCCAG+GGG + Chr3:70267937-70267956 None:intergenic 60.0%
!! GCTGCACTTGGTACTGGTGC+TGG + Chr3:70271489-70271508 None:intergenic 60.0%
GGCCGTCCAGTAACAAGGGC+TGG + Chr3:70268020-70268039 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 70267288 70271898 70267288 ID=MsG0380015444.01;Name=MsG0380015444.01
Chr3 mRNA 70267288 70271898 70267288 ID=MsG0380015444.01.T01;Parent=MsG0380015444.01;Name=MsG0380015444.01.T01;_AED=0.36;_eAED=0.36;_QI=136|1|1|1|0.66|0.8|10|383|309
Chr3 exon 70267288 70267739 70267288 ID=MsG0380015444.01.T01:exon:389;Parent=MsG0380015444.01.T01
Chr3 exon 70267882 70267967 70267882 ID=MsG0380015444.01.T01:exon:388;Parent=MsG0380015444.01.T01
Chr3 exon 70268053 70268110 70268053 ID=MsG0380015444.01.T01:exon:387;Parent=MsG0380015444.01.T01
Chr3 exon 70268332 70268454 70268332 ID=MsG0380015444.01.T01:exon:386;Parent=MsG0380015444.01.T01
Chr3 exon 70268624 70268682 70268624 ID=MsG0380015444.01.T01:exon:385;Parent=MsG0380015444.01.T01
Chr3 exon 70268825 70268900 70268825 ID=MsG0380015444.01.T01:exon:384;Parent=MsG0380015444.01.T01
Chr3 exon 70269044 70269140 70269044 ID=MsG0380015444.01.T01:exon:383;Parent=MsG0380015444.01.T01
Chr3 exon 70269428 70269509 70269428 ID=MsG0380015444.01.T01:exon:382;Parent=MsG0380015444.01.T01
Chr3 exon 70269588 70269680 70269588 ID=MsG0380015444.01.T01:exon:381;Parent=MsG0380015444.01.T01
Chr3 exon 70271576 70271898 70271576 ID=MsG0380015444.01.T01:exon:380;Parent=MsG0380015444.01.T01
Chr3 five_prime_UTR 70271763 70271898 70271763 ID=MsG0380015444.01.T01:five_prime_utr;Parent=MsG0380015444.01.T01
Chr3 CDS 70271576 70271762 70271576 ID=MsG0380015444.01.T01:cds;Parent=MsG0380015444.01.T01
Chr3 CDS 70269588 70269680 70269588 ID=MsG0380015444.01.T01:cds;Parent=MsG0380015444.01.T01
Chr3 CDS 70269428 70269509 70269428 ID=MsG0380015444.01.T01:cds;Parent=MsG0380015444.01.T01
Chr3 CDS 70269044 70269140 70269044 ID=MsG0380015444.01.T01:cds;Parent=MsG0380015444.01.T01
Chr3 CDS 70268825 70268900 70268825 ID=MsG0380015444.01.T01:cds;Parent=MsG0380015444.01.T01
Chr3 CDS 70268624 70268682 70268624 ID=MsG0380015444.01.T01:cds;Parent=MsG0380015444.01.T01
Chr3 CDS 70268332 70268454 70268332 ID=MsG0380015444.01.T01:cds;Parent=MsG0380015444.01.T01
Chr3 CDS 70268053 70268110 70268053 ID=MsG0380015444.01.T01:cds;Parent=MsG0380015444.01.T01
Chr3 CDS 70267882 70267967 70267882 ID=MsG0380015444.01.T01:cds;Parent=MsG0380015444.01.T01
Chr3 CDS 70267671 70267739 70267671 ID=MsG0380015444.01.T01:cds;Parent=MsG0380015444.01.T01
Chr3 three_prime_UTR 70267288 70267670 70267288 ID=MsG0380015444.01.T01:three_prime_utr;Parent=MsG0380015444.01.T01
Gene Sequence

>MsG0380015444.01.T01

ATGGATGTGATAAAAACGCAACAAATCTCATCACGTTCGATCGAGAAGGTGGTGGTTCATCCTCTAGTGTTGCTCAGCATCGTCGATAACTACAACAGAGTCGCCAAAGATACTCGCAAGCGTGTTGTCGGTGTTTTGCTTGGTTCTACTTTCAAAGGCACCGTTGATGTTTCCAATAGCTACGCTGTGCCTTTTGAAGAAGATGACAAGGACCCTAGCATTTGGTTTCTCGACCACAATTATCACGAAGCAATGTTTTCCATGTTTAAGAGAATAAATGCAAAGGAGCATGTGGTGGGGTGGTATAGCACTGGTCCAAAGCTGCGTGAAAATGACCTCGACATTCATGGGTTATTTAATGACTATGTTCCAAATCCCGTTTTGGTTATAATTGATGTTGAACCTAAGGAGTTGGGAATTCCAACAAAAGCATACTATGCTGTTGAGGAGGTTAAAGAGAATGCTACTCAGAAAAGCCAAAAGGTCTTTGTGCATGTGCAATCAGAGATTGCTGCTCATGAGGTTGAGGAAATAGGAGTGGAACACTTGCTCAGGGATGTGAAGGATACAACCATTAGCACCCTTGCAACCGAGGTGAGCGGAAAACTCACGGCCTTGAAAGGTTTGGATGCAAGACTTAAAGAGATAAGGAGTTACCTTGATCTTGTTATTGATGGAAAGCTTCCCTTAAACCATGAGATCCTATACCATCTGCAGGACGTGTTCAACCTGCTACCAAATCTCAATGTCTCTGATCTTATCAAGGCTTTTGCAGTGAAAACGAATGATATGATGCTGGTAATATACCTATCGTCTCTCATTAGAAGTGTAATTGCACTCCACAACTTGATTAACAACAAGATGCTCAACAAAGAACATGAAAGGGCAGAAGACTCAAAACCAGCACCAGTACCAAGTGCAGCTGCATAA

Protein sequence

>MsG0380015444.01.T01

MDVIKTQQISSRSIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSTFKGTVDVSNSYAVPFEEDDKDPSIWFLDHNYHEAMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFNDYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSGKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSDLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSKPAPVPSAAA*