Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017559.01.T01 | XP_003603555.1 | 97.101 | 276 | 8 | 0 | 1 | 276 | 1 | 276 | 0 | 550 |
| MsG0380017559.01.T01 | XP_003603555.1 | 76.503 | 183 | 29 | 3 | 250 | 419 | 325 | 506 | 1.14E-78 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017559.01.T01 | Q9SB75 | 66.78 | 295 | 88 | 5 | 1 | 287 | 1 | 293 | 2.48E-132 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017559.01.T01 | G7J2T7 | 97.101 | 276 | 8 | 0 | 1 | 276 | 1 | 276 | 0.0 | 550 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280010977.01 | MsG0380017559.01 | 0.852894 | 3.420635e-61 | 7.255962e-58 |
| MsG0280011416.01 | MsG0380017559.01 | 0.826332 | 2.874818e-54 | 2.687885e-51 |
| MsG0380016247.01 | MsG0380017559.01 | 0.818369 | 2.032322e-52 | 1.518475e-49 |
| MsG0380016920.01 | MsG0380017559.01 | 0.802382 | 5.760058e-49 | 2.817731e-46 |
| MsG0380017159.01 | MsG0380017559.01 | 0.877126 | 8.066901e-69 | 4.011015e-65 |
| MsG0380017559.01 | MsG0480020597.01 | 0.809098 | 2.238196e-50 | 1.302245e-47 |
| MsG0380017559.01 | MsG0480020699.01 | 0.849529 | 3.050293e-60 | 5.799057e-57 |
| MsG0380017559.01 | MsG0480020847.01 | 0.809712 | 1.652436e-50 | 9.773098e-48 |
| MsG0380017559.01 | MsG0480022045.01 | 0.802382 | 5.760573e-49 | 2.817965e-46 |
| MsG0380017559.01 | MsG0480022952.01 | 0.823772 | 1.157108e-53 | 1.005869e-50 |
| MsG0380017559.01 | MsG0480023146.01 | 0.826779 | 2.249003e-54 | 2.129699e-51 |
| MsG0380017559.01 | MsG0480023463.01 | 0.800593 | 1.340288e-48 | 6.265188e-46 |
| MsG0380017559.01 | MsG0480023647.01 | 0.840973 | 6.295061e-58 | 9.116902e-55 |
| MsG0380017559.01 | MsG0480023671.01 | 0.815211 | 1.038459e-51 | 7.114688e-49 |
| MsG0380017559.01 | MsG0580024109.01 | 0.805692 | 1.180449e-49 | 6.286515e-47 |
| MsG0380017559.01 | MsG0580024317.01 | 0.808079 | 3.693905e-50 | 2.092195e-47 |
| MsG0380017559.01 | MsG0580025645.01 | 0.812523 | 4.061904e-51 | 2.588534e-48 |
| MsG0380017559.01 | MsG0780036752.01 | 0.823701 | 1.201922e-53 | 1.042809e-50 |
| MsG0380017559.01 | MsG0780038332.01 | 0.848552 | 5.701130e-60 | 1.050072e-56 |
| MsG0380017559.01 | MsG0780040472.01 | 0.847956 | 8.328823e-60 | 1.504970e-56 |
| MsG0380017559.01 | MsG0780041735.01 | 0.824174 | 9.312547e-54 | 8.186873e-51 |
| MsG0380017559.01 | MsG0880042091.01 | 0.811080 | 8.372096e-51 | 5.133693e-48 |
| MsG0380017559.01 | MsG0880042544.01 | 0.814743 | 1.319023e-51 | 8.923348e-49 |
| MsG0380017559.01 | MsG0880042773.01 | 0.800049 | 1.729661e-48 | 7.974477e-46 |
| MsG0380017559.01 | MsG0880042791.01 | 0.812631 | 3.847798e-51 | 2.458948e-48 |
| MsG0380017559.01 | MsG0880043614.01 | 0.800003 | 1.766753e-48 | 8.136106e-46 |
| MsG0380017559.01 | MsG0880045483.01 | 0.845387 | 4.193535e-59 | 6.976851e-56 |
| MsG0380017559.01 | MsG0880045915.01 | 0.810287 | 1.242626e-50 | 7.460213e-48 |
| MsG0280009794.01 | MsG0380017559.01 | 0.826725 | 2.316834e-54 | 2.190572e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017559.01.T01 | MTR_3g109040 | 97.101 | 276 | 8 | 0 | 1 | 276 | 1 | 276 | 0.0 | 550 |
| MsG0380017559.01.T01 | MTR_3g109040 | 76.503 | 183 | 29 | 3 | 250 | 419 | 325 | 506 | 1.38e-82 | 267 |
| MsG0380017559.01.T01 | MTR_3g109040 | 96.981 | 265 | 8 | 0 | 12 | 276 | 1 | 265 | 0.0 | 526 |
| MsG0380017559.01.T01 | MTR_3g109040 | 76.503 | 183 | 29 | 3 | 250 | 419 | 314 | 495 | 5.77e-83 | 268 |
| MsG0380017559.01.T01 | MTR_4g006010 | 56.209 | 306 | 112 | 7 | 1 | 287 | 1 | 303 | 8.78e-104 | 323 |
| MsG0380017559.01.T01 | MTR_4g006010 | 77.500 | 160 | 22 | 3 | 273 | 419 | 363 | 521 | 6.05e-76 | 250 |
| MsG0380017559.01.T01 | MTR_3g103500 | 47.917 | 288 | 125 | 7 | 1 | 268 | 1 | 283 | 7.83e-79 | 253 |
| MsG0380017559.01.T01 | MTR_3g103500 | 75.000 | 128 | 18 | 3 | 273 | 387 | 363 | 489 | 2.02e-55 | 191 |
| MsG0380017559.01.T01 | MTR_6g007807 | 66.502 | 203 | 51 | 5 | 231 | 419 | 288 | 487 | 6.19e-78 | 254 |
| MsG0380017559.01.T01 | MTR_6g007807 | 45.312 | 256 | 121 | 6 | 19 | 268 | 7 | 249 | 4.77e-64 | 218 |
| MsG0380017559.01.T01 | MTR_3g103500 | 47.917 | 288 | 125 | 7 | 1 | 268 | 1 | 283 | 1.53e-77 | 254 |
| MsG0380017559.01.T01 | MTR_3g103500 | 76.250 | 160 | 24 | 3 | 273 | 419 | 363 | 521 | 2.90e-74 | 245 |
| MsG0380017559.01.T01 | MTR_8g012320 | 73.750 | 160 | 28 | 3 | 273 | 419 | 366 | 524 | 2.36e-58 | 203 |
| MsG0380017559.01.T01 | MTR_8g012320 | 38.966 | 290 | 147 | 6 | 2 | 268 | 4 | 286 | 1.43e-56 | 198 |
| MsG0380017559.01.T01 | MTR_4g074380 | 53.093 | 194 | 32 | 3 | 42 | 235 | 7 | 141 | 4.04e-51 | 170 |
| MsG0380017559.01.T01 | MTR_7g103590 | 45.625 | 160 | 74 | 3 | 273 | 419 | 222 | 381 | 4.11e-37 | 142 |
| MsG0380017559.01.T01 | MTR_7g103590 | 39.655 | 116 | 67 | 2 | 155 | 268 | 28 | 142 | 9.40e-18 | 85.9 |
| MsG0380017559.01.T01 | MTR_1g061340 | 43.750 | 160 | 77 | 3 | 273 | 419 | 213 | 372 | 9.88e-36 | 138 |
| MsG0380017559.01.T01 | MTR_1g061340 | 40.870 | 115 | 67 | 1 | 155 | 268 | 19 | 133 | 4.34e-18 | 86.7 |
| MsG0380017559.01.T01 | MTR_1g061270 | 44.375 | 160 | 76 | 3 | 273 | 419 | 213 | 372 | 1.04e-35 | 138 |
| MsG0380017559.01.T01 | MTR_1g061270 | 39.655 | 116 | 67 | 2 | 155 | 268 | 19 | 133 | 9.78e-16 | 79.3 |
| MsG0380017559.01.T01 | MTR_1g492700 | 41.848 | 184 | 92 | 4 | 250 | 419 | 197 | 379 | 1.57e-35 | 137 |
| MsG0380017559.01.T01 | MTR_1g492700 | 58.065 | 62 | 26 | 0 | 207 | 268 | 79 | 140 | 2.00e-15 | 78.6 |
| MsG0380017559.01.T01 | MTR_1g061510 | 43.125 | 160 | 78 | 3 | 273 | 419 | 213 | 372 | 5.19e-35 | 136 |
| MsG0380017559.01.T01 | MTR_1g061510 | 39.655 | 116 | 67 | 2 | 155 | 268 | 19 | 133 | 7.31e-17 | 82.8 |
| MsG0380017559.01.T01 | MTR_1g061280 | 43.750 | 160 | 77 | 3 | 273 | 419 | 213 | 372 | 5.51e-35 | 136 |
| MsG0380017559.01.T01 | MTR_1g061280 | 36.601 | 153 | 84 | 4 | 155 | 305 | 19 | 160 | 1.37e-18 | 88.2 |
| MsG0380017559.01.T01 | MTR_4g055520 | 42.857 | 161 | 77 | 4 | 273 | 419 | 142 | 301 | 4.85e-33 | 129 |
| MsG0380017559.01.T01 | MTR_4g055520 | 42.857 | 161 | 77 | 4 | 273 | 419 | 222 | 381 | 6.86e-33 | 129 |
| MsG0380017559.01.T01 | MTR_4g055520 | 38.793 | 116 | 68 | 2 | 155 | 268 | 28 | 142 | 4.06e-15 | 77.4 |
| MsG0380017559.01.T01 | MTR_4g055520 | 42.857 | 161 | 77 | 4 | 273 | 419 | 222 | 381 | 1.20e-32 | 129 |
| MsG0380017559.01.T01 | MTR_4g055520 | 38.793 | 116 | 68 | 2 | 155 | 268 | 28 | 142 | 3.95e-15 | 77.8 |
| MsG0380017559.01.T01 | MTR_7g101950 | 43.478 | 161 | 76 | 4 | 273 | 419 | 218 | 377 | 3.01e-32 | 128 |
| MsG0380017559.01.T01 | MTR_7g101950 | 36.441 | 118 | 69 | 2 | 154 | 268 | 24 | 138 | 2.60e-16 | 81.3 |
| MsG0380017559.01.T01 | MTR_4g108050 | 77.966 | 59 | 13 | 0 | 42 | 100 | 7 | 65 | 7.98e-23 | 92.0 |
| MsG0380017559.01.T01 | MTR_4g116020 | 80.769 | 52 | 10 | 0 | 189 | 240 | 59 | 110 | 2.23e-20 | 86.7 |
| MsG0380017559.01.T01 | MTR_4g116020 | 85.106 | 47 | 7 | 0 | 189 | 235 | 34 | 80 | 2.04e-19 | 83.6 |
| MsG0380017559.01.T01 | MTR_4g116020 | 85.106 | 47 | 7 | 0 | 189 | 235 | 59 | 105 | 6.08e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017559.01.T01 | AT4G31590 | 66.780 | 295 | 88 | 5 | 1 | 287 | 1 | 293 | 2.53e-133 | 399 |
| MsG0380017559.01.T01 | AT4G31590 | 79.375 | 160 | 19 | 3 | 273 | 419 | 353 | 511 | 1.72e-76 | 251 |
| MsG0380017559.01.T01 | AT2G24630 | 65.201 | 273 | 90 | 4 | 1 | 268 | 1 | 273 | 1.00e-123 | 374 |
| MsG0380017559.01.T01 | AT2G24630 | 66.502 | 203 | 51 | 5 | 231 | 419 | 312 | 511 | 9.28e-77 | 252 |
| MsG0380017559.01.T01 | AT2G24630 | 65.201 | 273 | 90 | 4 | 1 | 268 | 1 | 273 | 1.00e-123 | 374 |
| MsG0380017559.01.T01 | AT2G24630 | 66.502 | 203 | 51 | 5 | 231 | 419 | 312 | 511 | 9.28e-77 | 252 |
| MsG0380017559.01.T01 | AT3G28180 | 81.250 | 160 | 16 | 3 | 273 | 419 | 325 | 483 | 3.79e-80 | 260 |
| MsG0380017559.01.T01 | AT3G28180 | 46.667 | 255 | 114 | 6 | 21 | 268 | 6 | 245 | 4.77e-68 | 228 |
| MsG0380017559.01.T01 | AT4G07960 | 46.048 | 291 | 130 | 7 | 1 | 268 | 1 | 287 | 3.07e-77 | 253 |
| MsG0380017559.01.T01 | AT4G07960 | 76.875 | 160 | 23 | 3 | 273 | 419 | 367 | 525 | 8.34e-62 | 212 |
| MsG0380017559.01.T01 | AT4G07960 | 46.048 | 291 | 130 | 7 | 1 | 268 | 1 | 287 | 3.07e-77 | 253 |
| MsG0380017559.01.T01 | AT4G07960 | 76.875 | 160 | 23 | 3 | 273 | 419 | 367 | 525 | 8.34e-62 | 212 |
| MsG0380017559.01.T01 | AT3G07330 | 73.750 | 160 | 28 | 3 | 273 | 419 | 347 | 505 | 1.94e-69 | 232 |
| MsG0380017559.01.T01 | AT3G07330 | 39.245 | 265 | 154 | 3 | 6 | 268 | 8 | 267 | 4.40e-54 | 191 |
| MsG0380017559.01.T01 | AT3G07330 | 73.750 | 160 | 28 | 3 | 273 | 419 | 347 | 505 | 1.94e-69 | 232 |
| MsG0380017559.01.T01 | AT3G07330 | 39.245 | 265 | 154 | 3 | 6 | 268 | 8 | 267 | 4.40e-54 | 191 |
| MsG0380017559.01.T01 | AT4G16590 | 33.233 | 331 | 162 | 10 | 146 | 419 | 48 | 376 | 2.66e-39 | 148 |
| MsG0380017559.01.T01 | AT5G03760 | 44.375 | 160 | 76 | 3 | 273 | 419 | 223 | 382 | 4.31e-37 | 142 |
| MsG0380017559.01.T01 | AT5G03760 | 41.071 | 112 | 63 | 2 | 159 | 268 | 33 | 143 | 1.02e-17 | 85.5 |
| MsG0380017559.01.T01 | AT3G56000 | 44.099 | 161 | 75 | 4 | 273 | 419 | 221 | 380 | 1.46e-34 | 135 |
| MsG0380017559.01.T01 | AT3G56000 | 37.168 | 113 | 68 | 2 | 159 | 268 | 26 | 138 | 7.21e-14 | 73.9 |
| MsG0380017559.01.T01 | AT1G23480 | 44.375 | 160 | 74 | 4 | 274 | 419 | 102 | 260 | 2.98e-34 | 132 |
| MsG0380017559.01.T01 | AT2G35650 | 43.750 | 160 | 77 | 3 | 273 | 419 | 87 | 246 | 3.09e-34 | 132 |
| MsG0380017559.01.T01 | AT2G35650 | 43.750 | 160 | 77 | 3 | 273 | 419 | 173 | 332 | 8.08e-34 | 132 |
| MsG0380017559.01.T01 | AT2G35650 | 47.872 | 94 | 39 | 3 | 212 | 305 | 37 | 120 | 1.23e-16 | 82.0 |
| MsG0380017559.01.T01 | AT2G35650 | 43.750 | 160 | 77 | 3 | 273 | 419 | 173 | 332 | 8.08e-34 | 132 |
| MsG0380017559.01.T01 | AT2G35650 | 47.872 | 94 | 39 | 3 | 212 | 305 | 37 | 120 | 1.23e-16 | 82.0 |
| MsG0380017559.01.T01 | AT5G22740 | 44.720 | 161 | 74 | 4 | 273 | 419 | 223 | 382 | 8.48e-34 | 132 |
| MsG0380017559.01.T01 | AT5G22740 | 37.931 | 116 | 69 | 2 | 155 | 268 | 29 | 143 | 4.38e-15 | 77.4 |
| MsG0380017559.01.T01 | AT1G23480 | 44.375 | 160 | 74 | 4 | 274 | 419 | 175 | 333 | 9.19e-34 | 132 |
| MsG0380017559.01.T01 | AT1G23480 | 49.333 | 75 | 31 | 1 | 207 | 281 | 33 | 100 | 1.45e-14 | 75.9 |
| MsG0380017559.01.T01 | AT1G23480 | 44.375 | 160 | 74 | 4 | 274 | 419 | 247 | 405 | 1.67e-33 | 132 |
| MsG0380017559.01.T01 | AT1G23480 | 35.556 | 135 | 77 | 3 | 149 | 281 | 46 | 172 | 5.28e-17 | 83.6 |
| MsG0380017559.01.T01 | AT1G23480 | 44.375 | 160 | 74 | 4 | 274 | 419 | 247 | 405 | 1.67e-33 | 132 |
| MsG0380017559.01.T01 | AT1G23480 | 35.556 | 135 | 77 | 3 | 149 | 281 | 46 | 172 | 5.28e-17 | 83.6 |
| MsG0380017559.01.T01 | AT2G35650 | 43.750 | 160 | 77 | 3 | 273 | 419 | 245 | 404 | 1.68e-33 | 132 |
| MsG0380017559.01.T01 | AT2G35650 | 37.821 | 156 | 78 | 5 | 155 | 305 | 51 | 192 | 4.24e-19 | 90.1 |
| MsG0380017559.01.T01 | AT1G24070 | 42.236 | 161 | 78 | 4 | 273 | 419 | 248 | 407 | 1.63e-32 | 129 |
| MsG0380017559.01.T01 | AT1G24070 | 39.823 | 113 | 65 | 2 | 158 | 268 | 57 | 168 | 1.53e-17 | 85.1 |
| MsG0380017559.01.T01 | AT4G13410 | 41.615 | 161 | 79 | 4 | 273 | 419 | 76 | 235 | 5.82e-32 | 125 |
| MsG0380017559.01.T01 | AT4G13410 | 41.615 | 161 | 79 | 4 | 273 | 419 | 237 | 396 | 3.63e-31 | 125 |
| MsG0380017559.01.T01 | AT4G13410 | 38.333 | 120 | 61 | 2 | 155 | 267 | 43 | 156 | 1.13e-16 | 82.4 |
| MsG0380017559.01.T01 | AT5G16190 | 42.282 | 149 | 71 | 4 | 273 | 407 | 139 | 286 | 4.45e-29 | 118 |
| MsG0380017559.01.T01 | AT5G16190 | 57.143 | 56 | 24 | 0 | 212 | 267 | 3 | 58 | 4.40e-13 | 71.2 |
| MsG0380017559.01.T01 | AT5G16190 | 42.282 | 149 | 71 | 4 | 273 | 407 | 200 | 347 | 1.05e-28 | 118 |
| MsG0380017559.01.T01 | AT5G16190 | 40.351 | 114 | 67 | 1 | 155 | 267 | 6 | 119 | 3.95e-16 | 80.9 |
| MsG0380017559.01.T01 | AT5G16190 | 42.282 | 149 | 71 | 4 | 273 | 407 | 200 | 347 | 1.10e-28 | 117 |
| MsG0380017559.01.T01 | AT5G16190 | 40.351 | 114 | 67 | 1 | 155 | 267 | 6 | 119 | 3.77e-16 | 80.5 |
| MsG0380017559.01.T01 | AT5G16190 | 42.282 | 149 | 71 | 4 | 273 | 407 | 200 | 347 | 1.34e-28 | 118 |
| MsG0380017559.01.T01 | AT5G16190 | 40.351 | 114 | 67 | 1 | 155 | 267 | 6 | 119 | 4.00e-16 | 80.9 |
| MsG0380017559.01.T01 | AT1G24070 | 42.188 | 128 | 60 | 3 | 273 | 387 | 248 | 374 | 1.64e-24 | 104 |
| MsG0380017559.01.T01 | AT1G24070 | 39.823 | 113 | 65 | 2 | 158 | 268 | 57 | 168 | 1.75e-17 | 84.3 |
| MsG0380017559.01.T01 | AT4G13410 | 42.188 | 128 | 60 | 3 | 273 | 387 | 237 | 363 | 8.90e-23 | 99.8 |
| MsG0380017559.01.T01 | AT4G13410 | 38.333 | 120 | 61 | 2 | 155 | 267 | 43 | 156 | 6.95e-17 | 82.4 |
Find 166 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCAGTGTCACTAATTT+TGG | 0.054016 | 3:-97868857 | MsG0380017559.01.T01:five_prime_UTR |
| TACTTTCAAGGTTGGCATTT+TGG | 0.120896 | 3:-97868122 | MsG0380017559.01.T01:CDS |
| AATCTTCACAACTGAGAAAT+TGG | 0.125987 | 3:+97868412 | None:intergenic |
| GTTAATTTCTTTGGCTGTTT+TGG | 0.142194 | 3:-97868162 | MsG0380017559.01.T01:CDS |
| ACCGTATGCTTCTTTGTTTC+GGG | 0.170225 | 3:-97867944 | MsG0380017559.01.T01:CDS |
| TTCTCAGTTGTGAAGATTAA+TGG | 0.191808 | 3:-97868407 | MsG0380017559.01.T01:CDS |
| CAGCAACACCGCTGGCATTC+AGG | 0.192229 | 3:-97866553 | MsG0380017559.01.T01:CDS |
| ATGGGGTGTTCTTAATTTCT+TGG | 0.202836 | 3:-97866922 | MsG0380017559.01.T01:CDS |
| CAGAGGCAGAAATTCCTTTA+TGG | 0.207578 | 3:-97866054 | MsG0380017559.01.T01:three_prime_UTR |
| CTTGGTTAGTAACTGTTCTT+TGG | 0.224084 | 3:-97868280 | MsG0380017559.01.T01:CDS |
| TTAGCTTTCTTAACAGGTTC+TGG | 0.235289 | 3:+97865713 | None:intergenic |
| AAATAAGGTGAAGGAGTAAA+AGG | 0.246621 | 3:+97866106 | None:intergenic |
| TTCTTTGTTTCGGGTGGTTT+TGG | 0.256673 | 3:-97867935 | MsG0380017559.01.T01:CDS |
| GGAAGCATAAATTTATGTTT+TGG | 0.261801 | 3:+97866969 | None:intergenic |
| AAATTTAATGCAATGGTATC+TGG | 0.270707 | 3:-97865923 | MsG0380017559.01.T01:three_prime_UTR |
| CCTGCTGTTCTACTTCAAAA+TGG | 0.273610 | 3:+97866948 | None:intergenic |
| AGATTCGTAGTTGATGTTAT+TGG | 0.273969 | 3:+97868689 | None:intergenic |
| CAGGGAGTGGCTGTTGAAAA+AGG | 0.279089 | 3:-97868218 | MsG0380017559.01.T01:CDS |
| ATGCATTTATCCAATGGTTT+TGG | 0.280954 | 3:-97867841 | MsG0380017559.01.T01:CDS |
| GACCGTATGCTTCTTTGTTT+CGG | 0.285549 | 3:-97867945 | MsG0380017559.01.T01:CDS |
| ATCTTGTTAGCTTTCTTAAC+AGG | 0.305652 | 3:+97865707 | None:intergenic |
| GAGGTTGTTGCTTACTTTCA+AGG | 0.311089 | 3:-97868134 | MsG0380017559.01.T01:CDS |
| ACCTCAGATTTCAAAATTGC+TGG | 0.313915 | 3:+97866502 | None:intergenic |
| CTGAGTCATATGAAGCTTAC+AGG | 0.314147 | 3:-97866579 | MsG0380017559.01.T01:CDS |
| GCTTTGTGCTATTGTATTGC+TGG | 0.320170 | 3:+97865369 | None:intergenic |
| CTTGTAGGCCTTGATTTGAT+TGG | 0.321359 | 3:-97865572 | MsG0380017559.01.T01:three_prime_UTR |
| CAAAATTAGTGACACTGAAA+TGG | 0.329704 | 3:+97868858 | None:intergenic |
| AACACCAGTGGTGGTGAAAA+TGG | 0.333264 | 3:-97868441 | MsG0380017559.01.T01:CDS |
| ATGAACTCTGCTCAGACATT+TGG | 0.344263 | 3:+97865056 | None:intergenic |
| GTGCCGTTGGTTGTGTTACT+TGG | 0.350606 | 3:-97868298 | MsG0380017559.01.T01:CDS |
| TCTTAATTTCTTGGTTTCAA+TGG | 0.351998 | 3:-97866913 | MsG0380017559.01.T01:CDS |
| ATTTACAATGGCTCCAAGAT+TGG | 0.353231 | 3:-97868501 | MsG0380017559.01.T01:exon |
| CATGAGTTAAGTAAATAAAA+TGG | 0.353932 | 3:-97864906 | MsG0380017559.01.T01:three_prime_UTR |
| AACATAAAAGGAAAAGATTT+AGG | 0.354467 | 3:+97865981 | None:intergenic |
| CTACATTGCTCCACCAATTC+AGG | 0.355815 | 3:-97868012 | MsG0380017559.01.T01:CDS |
| AAACCATATGGAACCACCTT+TGG | 0.363318 | 3:+97868063 | None:intergenic |
| AAGAAGGATTATGCAAAATA+AGG | 0.367833 | 3:+97866091 | None:intergenic |
| TCCATATGGTTTATGTTGCT+TGG | 0.374551 | 3:-97868052 | MsG0380017559.01.T01:CDS |
| AAGGAGGTAAGGAACATAAA+AGG | 0.374596 | 3:+97865969 | None:intergenic |
| TTGGTTAGTAACTGTTCTTT+GGG | 0.379476 | 3:-97868279 | MsG0380017559.01.T01:CDS |
| ATCAAAGCCCTAGAAGAATC+TGG | 0.380417 | 3:-97866872 | MsG0380017559.01.T01:CDS |
| ATCTTCACAACTGAGAAATT+GGG | 0.381353 | 3:+97868413 | None:intergenic |
| TTTCTGCCTCTGGAACAAAA+TGG | 0.387674 | 3:+97866065 | None:intergenic |
| AGCAACACCGCTGGCATTCA+GGG | 0.390128 | 3:-97866552 | MsG0380017559.01.T01:CDS |
| ATAACAGAGAAACCTTGTTT+TGG | 0.396626 | 3:+97865276 | None:intergenic |
| GGGATGACATTCTTCCTTGT+AGG | 0.398447 | 3:-97865587 | MsG0380017559.01.T01:three_prime_UTR |
| CTTGGTTTCAATGGAACTGC+TGG | 0.399364 | 3:-97866904 | MsG0380017559.01.T01:CDS |
| GGTATCTGGACTCTTCCAAT+TGG | 0.403642 | 3:-97865909 | MsG0380017559.01.T01:three_prime_UTR |
| AATTGGGAAGCTCTTATGAA+TGG | 0.404164 | 3:-97865892 | MsG0380017559.01.T01:three_prime_UTR |
| AATGGATCCCCATTGATCAT+TGG | 0.406112 | 3:+97867891 | None:intergenic |
| CTAGGTTTGGTCCAGCTAGA+TGG | 0.407679 | 3:-97867030 | MsG0380017559.01.T01:intron |
| TTAGGTGCAGGAGAATGTTA+AGG | 0.410426 | 3:+97865999 | None:intergenic |
| TGGAACGTGAAACACACTAT+TGG | 0.412899 | 3:+97865491 | None:intergenic |
| GAGAACAACTGTAGAAGATA+TGG | 0.416414 | 3:-97866837 | MsG0380017559.01.T01:CDS |
| TTTCCAAAGGTGGTTCCATA+TGG | 0.418411 | 3:-97868066 | MsG0380017559.01.T01:CDS |
| TCTATATAGGCACTGGTCAC+TGG | 0.418415 | 3:-97865207 | MsG0380017559.01.T01:three_prime_UTR |
| CAACACGGGTTCAGCATCCT+TGG | 0.430491 | 3:+97865471 | None:intergenic |
| GCAAGAATGCTAAACAAGTT+AGG | 0.432413 | 3:-97868346 | MsG0380017559.01.T01:CDS |
| AGTATGAGGAATGTGCAAAT+TGG | 0.435051 | 3:+97868094 | None:intergenic |
| AGGTTAAGCCAATGATCAAT+GGG | 0.437598 | 3:-97867899 | MsG0380017559.01.T01:CDS |
| GAAGTAGAACAGCAGGTCAA+TGG | 0.438411 | 3:-97866941 | MsG0380017559.01.T01:CDS |
| GAAAAGGCTGGTTCGTAGAC+AGG | 0.438680 | 3:-97868237 | MsG0380017559.01.T01:CDS |
| AACTTCGAAAGTGCCTGAAT+TGG | 0.444764 | 3:+97867999 | None:intergenic |
| AATTTCTGCAGTGTGTCAAA+TGG | 0.446405 | 3:-97867421 | MsG0380017559.01.T01:CDS |
| TTCGAAAGTGCCTGAATTGG+TGG | 0.450121 | 3:+97868002 | None:intergenic |
| ACCAAGCAACATAAACCATA+TGG | 0.452313 | 3:+97868051 | None:intergenic |
| AAGTAGAACAGCAGGTCAAT+GGG | 0.453067 | 3:-97866940 | MsG0380017559.01.T01:CDS |
| CATAAAGGAATTTCTGCCTC+TGG | 0.453923 | 3:+97866055 | None:intergenic |
| ATTGGAAAAGGCACATTATG+AGG | 0.455854 | 3:+97868753 | None:intergenic |
| ACATAGCAGATCAACCATAA+AGG | 0.458153 | 3:+97866040 | None:intergenic |
| GAATAAGACACAAACTTTCA+AGG | 0.461463 | 3:+97868784 | None:intergenic |
| TGCTTGGTGCTATTAAGAAA+AGG | 0.466972 | 3:-97868253 | MsG0380017559.01.T01:CDS |
| GGAATTTGAACCAAAACCAT+TGG | 0.468674 | 3:+97867831 | None:intergenic |
| TCAACATCATCAACCTTGAA+TGG | 0.468739 | 3:+97867873 | None:intergenic |
| AAGACACCTAACATTGGAAA+AGG | 0.469988 | 3:+97868741 | None:intergenic |
| GACATTTGGAATGGTGAGAT+AGG | 0.474946 | 3:+97865070 | None:intergenic |
| ATCTGTATGCATTTATCCAA+TGG | 0.475291 | 3:-97867847 | MsG0380017559.01.T01:CDS |
| AAAATTAGTGACACTGAAAT+GGG | 0.475685 | 3:+97868859 | None:intergenic |
| AAGGTTAAGCCAATGATCAA+TGG | 0.477569 | 3:-97867900 | MsG0380017559.01.T01:CDS |
| ATTCATAAGAGCTTCCCAAT+TGG | 0.477893 | 3:+97865894 | None:intergenic |
| TCCAATGTGCAATGAGAAAG+AGG | 0.482610 | 3:-97867811 | MsG0380017559.01.T01:intron |
| ACTGTTCTTTGGGATTTGCT+TGG | 0.488047 | 3:-97868269 | MsG0380017559.01.T01:CDS |
| CGTGTCAGCGCACAATTGAA+TGG | 0.488875 | 3:+97865429 | None:intergenic |
| GTGACACTGAAATGGGTACT+AGG | 0.489931 | 3:+97868866 | None:intergenic |
| ATTAAGTTTGCTTTCTTCCA+CGG | 0.493411 | 3:+97866164 | None:intergenic |
| GAAGCATACGGTCCACGGAT+TGG | 0.496178 | 3:+97867955 | None:intergenic |
| TTCATCACAAGTATCTATAT+AGG | 0.497816 | 3:-97865220 | MsG0380017559.01.T01:three_prime_UTR |
| AATAAGGTGAAGGAGTAAAA+GGG | 0.501255 | 3:+97866107 | None:intergenic |
| AAAGGAAAAGATTTAGGTGC+AGG | 0.501525 | 3:+97865987 | None:intergenic |
| GATCAATGGGGATCCATTCA+AGG | 0.501987 | 3:-97867886 | MsG0380017559.01.T01:CDS |
| TGGATTGTCACAAAGAAAGC+TGG | 0.503165 | 3:-97865872 | MsG0380017559.01.T01:three_prime_UTR |
| ATATTTACAGTGATCAATCA+TGG | 0.503419 | 3:+97868814 | None:intergenic |
| ATGGTGCAGATGCTGCATTT+AGG | 0.506624 | 3:-97868388 | MsG0380017559.01.T01:CDS |
| GTAAATAAAATGGTGTCGGC+AGG | 0.506989 | 3:-97864896 | MsG0380017559.01.T01:three_prime_UTR |
| TCAAAGCCCTAGAAGAATCT+GGG | 0.507079 | 3:-97866871 | MsG0380017559.01.T01:CDS |
| TCCAACCATTGAGGTGAGCT+CGG | 0.507425 | 3:+97866804 | None:intergenic |
| AATGGGTCAAACAGAAATGA+AGG | 0.507855 | 3:+97864987 | None:intergenic |
| TTGTTGCTTACTTTCAAGGT+TGG | 0.508405 | 3:-97868130 | MsG0380017559.01.T01:CDS |
| CTCATACTTCTGATTTCCAA+AGG | 0.508694 | 3:-97868079 | MsG0380017559.01.T01:CDS |
| TTCAATGGAACTGCTGGTGT+TGG | 0.508839 | 3:-97866898 | MsG0380017559.01.T01:CDS |
| TGGAACAAAATGGTTAAAGA+AGG | 0.516226 | 3:+97866075 | None:intergenic |
| GTATCTGGACTCTTCCAATT+GGG | 0.517060 | 3:-97865908 | MsG0380017559.01.T01:three_prime_UTR |
| TTCAAGGTTGATGATGTTGA+AGG | 0.517442 | 3:-97867870 | MsG0380017559.01.T01:CDS |
| CTTAAAGCTCATCGTGCCGT+TGG | 0.518642 | 3:-97868311 | MsG0380017559.01.T01:CDS |
| ATAGTGTGTTTCACGTTCCA+AGG | 0.526080 | 3:-97865488 | MsG0380017559.01.T01:three_prime_UTR |
| CTTTGGAAATCAGAAGTATG+AGG | 0.527295 | 3:+97868080 | None:intergenic |
| GCTGTCCGAGCTCACCTCAA+TGG | 0.528881 | 3:-97866809 | MsG0380017559.01.T01:intron |
| CAATCAAATCAAGGCCTACA+AGG | 0.531066 | 3:+97865573 | None:intergenic |
| ACCTCTTTCTCATTGCACAT+TGG | 0.537709 | 3:+97867810 | None:intergenic |
| ACAAAGAAGCATACGGTCCA+CGG | 0.540829 | 3:+97867950 | None:intergenic |
| AAAAGGCTGGTTCGTAGACA+GGG | 0.541112 | 3:-97868236 | MsG0380017559.01.T01:CDS |
| TCTGCTCTCCAATCAAATCA+AGG | 0.541124 | 3:+97865564 | None:intergenic |
| TGTTGAGTTACAGCAATTGA+AGG | 0.542426 | 3:-97865753 | MsG0380017559.01.T01:three_prime_UTR |
| TGGTGCTATTAAGAAAAGGC+TGG | 0.543425 | 3:-97868249 | MsG0380017559.01.T01:CDS |
| CTGTTCTGAGAGTTTCAGAA+AGG | 0.544450 | 3:+97865327 | None:intergenic |
| AGATAAATTTCCAACCATTG+AGG | 0.544758 | 3:+97866795 | None:intergenic |
| ACAAGGAAGAATGTCATCCC+TGG | 0.547571 | 3:+97865590 | None:intergenic |
| CTGCAGTGTGTCAAATGGAT+TGG | 0.548428 | 3:-97867416 | MsG0380017559.01.T01:CDS |
| GACTGCAACTTATAGAGTGT+GGG | 0.549186 | 3:+97865391 | None:intergenic |
| TTAAGGATTGACATGCATAC+AGG | 0.551931 | 3:+97866016 | None:intergenic |
| TTTGTTTCTTATCCAATCCG+TGG | 0.553534 | 3:-97867967 | MsG0380017559.01.T01:CDS |
| TTCACAAAAGACCATCTAGC+TGG | 0.554017 | 3:+97867019 | None:intergenic |
| GAATGCTAAACAAGTTAGGT+GGG | 0.557662 | 3:-97868342 | MsG0380017559.01.T01:CDS |
| GCTGGTTCGTAGACAGGGAG+TGG | 0.560932 | 3:-97868231 | MsG0380017559.01.T01:CDS |
| TGAATCAGTAAACGATCCCT+TGG | 0.561328 | 3:+97867393 | None:intergenic |
| TGTGTCAAATGGATTGGCCA+AGG | 0.564789 | 3:-97867410 | MsG0380017559.01.T01:CDS |
| ACAAGTATCTATATAGGCAC+TGG | 0.569592 | 3:-97865214 | MsG0380017559.01.T01:three_prime_UTR |
| AGAATGCTAAACAAGTTAGG+TGG | 0.573310 | 3:-97868343 | MsG0380017559.01.T01:CDS |
| TGCAGATGCTGCATTTAGGC+CGG | 0.573889 | 3:-97868384 | MsG0380017559.01.T01:CDS |
| TCTTCACAACTGAGAAATTG+GGG | 0.578230 | 3:+97868414 | None:intergenic |
| ACAGGAAGCAGCAACACCGC+TGG | 0.578674 | 3:-97866561 | MsG0380017559.01.T01:CDS |
| GTATGCTTCTTTGTTTCGGG+TGG | 0.578929 | 3:-97867941 | MsG0380017559.01.T01:CDS |
| CTGTAAGCTTCATATGACTC+AGG | 0.579123 | 3:+97866580 | None:intergenic |
| TTAAGTAAATAAAATGGTGT+CGG | 0.583799 | 3:-97864900 | MsG0380017559.01.T01:three_prime_UTR |
| TGGATGAAGGATTCACAGAA+AGG | 0.587309 | 3:-97868464 | MsG0380017559.01.T01:CDS |
| CTTGTTTAGCATTCTTGCCG+CGG | 0.588225 | 3:+97868351 | None:intergenic |
| CTCTGCTCAGACATTTGGAA+TGG | 0.590647 | 3:+97865061 | None:intergenic |
| ATACTTCTGATTTCCAAAGG+TGG | 0.593673 | 3:-97868076 | MsG0380017559.01.T01:CDS |
| TGTGACTAAATTTAATGCAA+TGG | 0.593823 | 3:-97865930 | MsG0380017559.01.T01:three_prime_UTR |
| GATTATGCAAAATAAGGTGA+AGG | 0.598839 | 3:+97866097 | None:intergenic |
| AGGTGAAGGAGTAAAAGGGA+AGG | 0.604134 | 3:+97866111 | None:intergenic |
| CAAAGCCCTAGAAGAATCTG+GGG | 0.611476 | 3:-97866870 | MsG0380017559.01.T01:CDS |
| CACAGAGGAGCTTCTGACAG+TGG | 0.622297 | 3:-97865778 | MsG0380017559.01.T01:three_prime_UTR |
| TAACCAAGTAACACAACCAA+CGG | 0.623439 | 3:+97868295 | None:intergenic |
| GTGTCAAATGGATTGGCCAA+GGG | 0.623875 | 3:-97867409 | MsG0380017559.01.T01:CDS |
| TACATATAGTTGATTCAACA+CGG | 0.632486 | 3:+97865456 | None:intergenic |
| ACCCGAAACAAAGAAGCATA+CGG | 0.633312 | 3:+97867943 | None:intergenic |
| GGACTGCAACTTATAGAGTG+TGG | 0.638385 | 3:+97865390 | None:intergenic |
| ACAGAAAGGAACACCAGTGG+TGG | 0.639233 | 3:-97868450 | MsG0380017559.01.T01:CDS |
| ATTAAATTTAGTCACAGACA+TGG | 0.642279 | 3:+97865937 | None:intergenic |
| ATATTAATCAGCAGAAGATG+TGG | 0.643498 | 3:+97865514 | None:intergenic |
| TGTGAAACTGTGATTTACAA+TGG | 0.643682 | 3:-97868513 | MsG0380017559.01.T01:exon |
| GACAACAAAGAGTAAAGACA+TGG | 0.646506 | 3:+97868642 | None:intergenic |
| AGAAGTCTGTTATCTGCACA+AGG | 0.657709 | 3:-97865636 | MsG0380017559.01.T01:three_prime_UTR |
| ACATATAGTTGATTCAACAC+GGG | 0.660206 | 3:+97865457 | None:intergenic |
| GCATAGGCCCTGAATGCCAG+CGG | 0.672215 | 3:+97866545 | None:intergenic |
| CACAGCCTAAAAGTTTGCAT+AGG | 0.673445 | 3:+97866529 | None:intergenic |
| TTGTCACAAAGAAAGCTGGA+AGG | 0.675157 | 3:-97865868 | MsG0380017559.01.T01:three_prime_UTR |
| ACCAGTGGTGGTGAAAATGG+AGG | 0.695679 | 3:-97868438 | MsG0380017559.01.T01:CDS |
| AGTAGAACAGCAGGTCAATG+GGG | 0.717208 | 3:-97866939 | MsG0380017559.01.T01:CDS |
| TTCACAGAAAGGAACACCAG+TGG | 0.722164 | 3:-97868453 | MsG0380017559.01.T01:CDS |
| GAACAACAAAAGATTCACAG+AGG | 0.731952 | 3:-97865793 | MsG0380017559.01.T01:three_prime_UTR |
| AAAGCCCTAGAAGAATCTGG+GGG | 0.740097 | 3:-97866869 | MsG0380017559.01.T01:CDS |
| TTTAACTGCAGGTGTCACCG+TGG | 0.746704 | 3:-97866181 | MsG0380017559.01.T01:intron |
| GGTTAAGCCAATGATCAATG+GGG | 0.761083 | 3:-97867898 | MsG0380017559.01.T01:CDS |
| CTGATGATAAGAGCATACAG+TGG | 0.761449 | 3:-97867356 | MsG0380017559.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACAAAGAAAAACAAA+TGG | + | Chr3:97868835-97868854 | None:intergenic | 15.0% |
| !! | AAAAACAAAGAAAAACAAAT+GGG | + | Chr3:97868834-97868853 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTGTTAATTTCTT+TGG | - | Chr3:97865630-97865649 | MsG0380017559.01.T01:three_prime_UTR | 15.0% |
| !! | AACATAAAAGGAAAAGATTT+AGG | + | Chr3:97867823-97867842 | None:intergenic | 20.0% |
| !! | CATGAGTTAAGTAAATAAAA+TGG | - | Chr3:97868895-97868914 | MsG0380017559.01.T01:five_prime_UTR | 20.0% |
| !! | GAATGAATGAAAAATTGATA+GGG | + | Chr3:97868555-97868574 | None:intergenic | 20.0% |
| !! | TCTTAAATTTATTTAACTGC+AGG | - | Chr3:97867609-97867628 | MsG0380017559.01.T01:intron | 20.0% |
| !! | TGAATGAATGAAAAATTGAT+AGG | + | Chr3:97868556-97868575 | None:intergenic | 20.0% |
| !! | TTAAGTAAATAAAATGGTGT+CGG | - | Chr3:97868901-97868920 | MsG0380017559.01.T01:five_prime_UTR | 20.0% |
| !! | TTATATTATGTATGCCTAAA+GGG | - | Chr3:97867586-97867605 | MsG0380017559.01.T01:intron | 20.0% |
| !!! | AAATAAATTTAAGACCCTTT+AGG | + | Chr3:97867603-97867622 | None:intergenic | 20.0% |
| !!! | CTTAATTTGTGTTAAATTTC+AGG | - | Chr3:97867185-97867204 | MsG0380017559.01.T01:intron | 20.0% |
| !!! | GTTTTCTTTATTTTGTTCTT+TGG | - | Chr3:97868676-97868695 | MsG0380017559.01.T01:five_prime_UTR | 20.0% |
| !!! | TCTTTGTTTTTTTTTGTTAC+TGG | - | Chr3:97868843-97868862 | MsG0380017559.01.T01:five_prime_UTR | 20.0% |
| !!! | TTATTTTAAGTACCAAAACA+AGG | - | Chr3:97868513-97868532 | MsG0380017559.01.T01:exon | 20.0% |
| ! | AAAATTAGTGACACTGAAAT+GGG | + | Chr3:97864945-97864964 | None:intergenic | 25.0% |
| ! | AAATTTAATGCAATGGTATC+TGG | - | Chr3:97867878-97867897 | MsG0380017559.01.T01:CDS | 25.0% |
| ! | AAGAAGGATTATGCAAAATA+AGG | + | Chr3:97867713-97867732 | None:intergenic | 25.0% |
| ! | ACTATTACATTGAAACTTAC+TGG | + | Chr3:97866079-97866098 | None:intergenic | 25.0% |
| ! | AGATTGCAGAAAATTCTTAA+GGG | + | Chr3:97866208-97866227 | None:intergenic | 25.0% |
| ! | ATATTTACAGTGATCAATCA+TGG | + | Chr3:97864990-97865009 | None:intergenic | 25.0% |
| ! | ATTAAATTTAGTCACAGACA+TGG | + | Chr3:97867867-97867886 | None:intergenic | 25.0% |
| ! | ATTTATCTTCCTAAATGTCA+AGG | - | Chr3:97867021-97867040 | MsG0380017559.01.T01:CDS | 25.0% |
| ! | GTATAAAAGTTGTCAAATAG+CGG | - | Chr3:97867458-97867477 | MsG0380017559.01.T01:intron | 25.0% |
| ! | GTTATATTATGTATGCCTAA+AGG | - | Chr3:97867585-97867604 | MsG0380017559.01.T01:intron | 25.0% |
| ! | TACTGAGTATTTGCAATTAT+TGG | - | Chr3:97867563-97867582 | MsG0380017559.01.T01:intron | 25.0% |
| ! | TATTATGCACTATGAAAGAA+AGG | + | Chr3:97867090-97867109 | None:intergenic | 25.0% |
| ! | TCAATGACATTGACAAAATA+TGG | - | Chr3:97866301-97866320 | MsG0380017559.01.T01:intron | 25.0% |
| ! | TCTTAATTTCTTGGTTTCAA+TGG | - | Chr3:97866888-97866907 | MsG0380017559.01.T01:CDS | 25.0% |
| ! | TGTGACTAAATTTAATGCAA+TGG | - | Chr3:97867871-97867890 | MsG0380017559.01.T01:CDS | 25.0% |
| ! | TTCATCACAAGTATCTATAT+AGG | - | Chr3:97868581-97868600 | MsG0380017559.01.T01:five_prime_UTR | 25.0% |
| !! | AGTTTTGCTTAAGAAAATCA+GGG | + | Chr3:97866641-97866660 | None:intergenic | 25.0% |
| !! | ATATAAAAAAGAGCTGACTT+TGG | - | Chr3:97868117-97868136 | MsG0380017559.01.T01:CDS | 25.0% |
| !! | ATTTTGTTCTTTGGTTGTAT+TGG | - | Chr3:97868685-97868704 | MsG0380017559.01.T01:five_prime_UTR | 25.0% |
| !! | TACATATAGTTGATTCAACA+CGG | + | Chr3:97868348-97868367 | None:intergenic | 25.0% |
| !! | TTTTGTTCTTTGGTTGTATT+GGG | - | Chr3:97868686-97868705 | MsG0380017559.01.T01:five_prime_UTR | 25.0% |
| !!! | ATTTCAACACTGTTTTTTTC+AGG | - | Chr3:97864902-97864921 | MsG0380017559.01.T01:three_prime_UTR | 25.0% |
| !!! | ATTTCAGTGTCACTAATTTT+GGG | - | Chr3:97864945-97864964 | MsG0380017559.01.T01:three_prime_UTR | 25.0% |
| !!! | GGAAGCATAAATTTATGTTT+TGG | + | Chr3:97866835-97866854 | None:intergenic | 25.0% |
| AAATAAGGTGAAGGAGTAAA+AGG | + | Chr3:97867698-97867717 | None:intergenic | 30.0% | |
| AATAAGGTGAAGGAGTAAAA+GGG | + | Chr3:97867697-97867716 | None:intergenic | 30.0% | |
| AATCTTCACAACTGAGAAAT+TGG | + | Chr3:97865392-97865411 | None:intergenic | 30.0% | |
| AGATAAATTTCCAACCATTG+AGG | + | Chr3:97867009-97867028 | None:intergenic | 30.0% | |
| AGGGAATCAACATAATCTAT+CGG | - | Chr3:97866503-97866522 | MsG0380017559.01.T01:intron | 30.0% | |
| ATATTAATCAGCAGAAGATG+TGG | + | Chr3:97868290-97868309 | None:intergenic | 30.0% | |
| ATCTGTATGCATTTATCCAA+TGG | - | Chr3:97865954-97865973 | MsG0380017559.01.T01:three_prime_UTR | 30.0% | |
| ATCTTCACAACTGAGAAATT+GGG | + | Chr3:97865391-97865410 | None:intergenic | 30.0% | |
| CAAAATTAGTGACACTGAAA+TGG | + | Chr3:97864946-97864965 | None:intergenic | 30.0% | |
| CAACTTGAAAAATCCAATCT+TGG | + | Chr3:97865316-97865335 | None:intergenic | 30.0% | |
| GAAATTTAAGAGAGTTCTTC+AGG | + | Chr3:97867166-97867185 | None:intergenic | 30.0% | |
| GAATAAGACACAAACTTTCA+AGG | + | Chr3:97865020-97865039 | None:intergenic | 30.0% | |
| GAGATTGCAGAAAATTCTTA+AGG | + | Chr3:97866209-97866228 | None:intergenic | 30.0% | |
| GATTATGCAAAATAAGGTGA+AGG | + | Chr3:97867707-97867726 | None:intergenic | 30.0% | |
| TAAAAACCTCATAGCAAAAC+TGG | + | Chr3:97866038-97866057 | None:intergenic | 30.0% | |
| TAAAACAACACAGCATCAAA+TGG | + | Chr3:97866257-97866276 | None:intergenic | 30.0% | |
| TGGAACAAAATGGTTAAAGA+AGG | + | Chr3:97867729-97867748 | None:intergenic | 30.0% | |
| TGTGAAACTGTGATTTACAA+TGG | - | Chr3:97865288-97865307 | MsG0380017559.01.T01:three_prime_UTR | 30.0% | |
| TTATGATCACCTTGACATTT+AGG | + | Chr3:97867033-97867052 | None:intergenic | 30.0% | |
| TTCTCAGTTGTGAAGATTAA+TGG | - | Chr3:97865394-97865413 | MsG0380017559.01.T01:three_prime_UTR | 30.0% | |
| TTGGTTAGTAACTGTTCTTT+GGG | - | Chr3:97865522-97865541 | MsG0380017559.01.T01:three_prime_UTR | 30.0% | |
| TTTGCAAATGACTTGATTAC+AGG | - | Chr3:97866737-97866756 | MsG0380017559.01.T01:intron | 30.0% | |
| ! | ACATATAGTTGATTCAACAC+GGG | + | Chr3:97868347-97868366 | None:intergenic | 30.0% |
| ! | AGATTCGTAGTTGATGTTAT+TGG | + | Chr3:97865115-97865134 | None:intergenic | 30.0% |
| ! | ATGCATTTATCCAATGGTTT+TGG | - | Chr3:97865960-97865979 | MsG0380017559.01.T01:three_prime_UTR | 30.0% |
| ! | ATTAAGTTTGCTTTCTTCCA+CGG | + | Chr3:97867640-97867659 | None:intergenic | 30.0% |
| ! | CAGTTTTGCTTAAGAAAATC+AGG | + | Chr3:97866642-97866661 | None:intergenic | 30.0% |
| ! | GTTAATTTCTTTGGCTGTTT+TGG | - | Chr3:97865639-97865658 | MsG0380017559.01.T01:three_prime_UTR | 30.0% |
| !! | ATAACAGAGAAACCTTGTTT+TGG | + | Chr3:97868528-97868547 | None:intergenic | 30.0% |
| !! | ATCTTGTTAGCTTTCTTAAC+AGG | + | Chr3:97868097-97868116 | None:intergenic | 30.0% |
| !! | ATTCTACTTTCTGTTTTTCC+AGG | - | Chr3:97868193-97868212 | MsG0380017559.01.T01:CDS | 30.0% |
| !! | CATTTCAGTGTCACTAATTT+TGG | - | Chr3:97864944-97864963 | MsG0380017559.01.T01:three_prime_UTR | 30.0% |
| !! | GTTTTGGATCAAATTCAAGA+AGG | - | Chr3:97865882-97865901 | MsG0380017559.01.T01:three_prime_UTR | 30.0% |
| !! | TTCTACTTTCTGTTTTTCCA+GGG | - | Chr3:97868194-97868213 | MsG0380017559.01.T01:CDS | 30.0% |
| !! | TTTTTGAAGACACCTAACAT+TGG | + | Chr3:97865069-97865088 | None:intergenic | 30.0% |
| !!! | AGATTATGTTGATTCCCTTT+TGG | + | Chr3:97866501-97866520 | None:intergenic | 30.0% |
| !!! | CAAGATTGGATTTTTCAAGT+TGG | - | Chr3:97865314-97865333 | MsG0380017559.01.T01:three_prime_UTR | 30.0% |
| !!! | CTTTTGTTGTTCTATTGACT+CGG | + | Chr3:97868000-97868019 | None:intergenic | 30.0% |
| !!! | TTCTGCTATTTTTTCTGCTA+AGG | - | Chr3:97867659-97867678 | MsG0380017559.01.T01:intron | 30.0% |
| AAAACTGGAATGCAGAAGTT+CGG | + | Chr3:97866023-97866042 | None:intergenic | 35.0% | |
| AAAGGAAAAGATTTAGGTGC+AGG | + | Chr3:97867817-97867836 | None:intergenic | 35.0% | |
| AAGACACCTAACATTGGAAA+AGG | + | Chr3:97865063-97865082 | None:intergenic | 35.0% | |
| AAGGAGGTAAGGAACATAAA+AGG | + | Chr3:97867835-97867854 | None:intergenic | 35.0% | |
| AAGGTTAAGCCAATGATCAA+TGG | - | Chr3:97865901-97865920 | MsG0380017559.01.T01:three_prime_UTR | 35.0% | |
| AATGGGTCAAACAGAAATGA+AGG | + | Chr3:97868817-97868836 | None:intergenic | 35.0% | |
| AATTGGGAAGCTCTTATGAA+TGG | - | Chr3:97867909-97867928 | MsG0380017559.01.T01:CDS | 35.0% | |
| AATTTCTGCAGTGTGTCAAA+TGG | - | Chr3:97866380-97866399 | MsG0380017559.01.T01:intron | 35.0% | |
| ACAAGTATCTATATAGGCAC+TGG | - | Chr3:97868587-97868606 | MsG0380017559.01.T01:five_prime_UTR | 35.0% | |
| ACAGAAGTTCGATTTCATGA+AGG | + | Chr3:97867128-97867147 | None:intergenic | 35.0% | |
| ACATAGCAGATCAACCATAA+AGG | + | Chr3:97867764-97867783 | None:intergenic | 35.0% | |
| ACCAAGCAACATAAACCATA+TGG | + | Chr3:97865753-97865772 | None:intergenic | 35.0% | |
| ACCTCAGATTTCAAAATTGC+TGG | + | Chr3:97867302-97867321 | None:intergenic | 35.0% | |
| AGAATGCTAAACAAGTTAGG+TGG | - | Chr3:97865458-97865477 | MsG0380017559.01.T01:three_prime_UTR | 35.0% | |
| AGAGCATACAGTGGTTAATT+AGG | - | Chr3:97866454-97866473 | MsG0380017559.01.T01:intron | 35.0% | |
| AGGTTAAGCCAATGATCAAT+GGG | - | Chr3:97865902-97865921 | MsG0380017559.01.T01:three_prime_UTR | 35.0% | |
| AGTATGAGGAATGTGCAAAT+TGG | + | Chr3:97865710-97865729 | None:intergenic | 35.0% | |
| ATACTTCTGATTTCCAAAGG+TGG | - | Chr3:97865725-97865744 | MsG0380017559.01.T01:three_prime_UTR | 35.0% | |
| ATCTTCACTAACCTTGAATG+TGG | + | Chr3:97866667-97866686 | None:intergenic | 35.0% | |
| ATTCATAAGAGCTTCCCAAT+TGG | + | Chr3:97867910-97867929 | None:intergenic | 35.0% | |
| ATTTACAATGGCTCCAAGAT+TGG | - | Chr3:97865300-97865319 | MsG0380017559.01.T01:three_prime_UTR | 35.0% | |
| CTCATACTTCTGATTTCCAA+AGG | - | Chr3:97865722-97865741 | MsG0380017559.01.T01:three_prime_UTR | 35.0% | |
| CTTGGTTAGTAACTGTTCTT+TGG | - | Chr3:97865521-97865540 | MsG0380017559.01.T01:three_prime_UTR | 35.0% | |
| GAACAACAAAAGATTCACAG+AGG | - | Chr3:97868008-97868027 | MsG0380017559.01.T01:CDS | 35.0% | |
| GAATGCTAAACAAGTTAGGT+GGG | - | Chr3:97865459-97865478 | MsG0380017559.01.T01:three_prime_UTR | 35.0% | |
| GACAACAAAGAGTAAAGACA+TGG | + | Chr3:97865162-97865181 | None:intergenic | 35.0% | |
| GAGAACAACTGTAGAAGATA+TGG | - | Chr3:97866964-97866983 | MsG0380017559.01.T01:CDS | 35.0% | |
| GCAAGAATGCTAAACAAGTT+AGG | - | Chr3:97865455-97865474 | MsG0380017559.01.T01:three_prime_UTR | 35.0% | |
| GGAATTTGAACCAAAACCAT+TGG | + | Chr3:97865973-97865992 | None:intergenic | 35.0% | |
| TAACCAAGTAACACAACCAA+CGG | + | Chr3:97865509-97865528 | None:intergenic | 35.0% | |
| TCAACATCATCAACCTTGAA+TGG | + | Chr3:97865931-97865950 | None:intergenic | 35.0% | |
| TCCATATGGTTTATGTTGCT+TGG | - | Chr3:97865749-97865768 | MsG0380017559.01.T01:three_prime_UTR | 35.0% | |
| TCTTCACAACTGAGAAATTG+GGG | + | Chr3:97865390-97865409 | None:intergenic | 35.0% | |
| TGAGCAATGTTGTCAAATAG+CGG | - | Chr3:97867379-97867398 | MsG0380017559.01.T01:CDS | 35.0% | |
| TGCTTAAGAAAATCAGGGTT+TGG | + | Chr3:97866636-97866655 | None:intergenic | 35.0% | |
| TGTTGAGTTACAGCAATTGA+AGG | - | Chr3:97868048-97868067 | MsG0380017559.01.T01:CDS | 35.0% | |
| TTAAGGATTGACATGCATAC+AGG | + | Chr3:97867788-97867807 | None:intergenic | 35.0% | |
| TTACAGGATAATCCTGAACT+AGG | - | Chr3:97866753-97866772 | MsG0380017559.01.T01:intron | 35.0% | |
| TTCTCTAAGTGGAACCAAAA+GGG | - | Chr3:97866484-97866503 | MsG0380017559.01.T01:intron | 35.0% | |
| TTGCAGATCGCAAAAAATAG+TGG | + | Chr3:97867530-97867549 | None:intergenic | 35.0% | |
| TTTCTCTAAGTGGAACCAAA+AGG | - | Chr3:97866483-97866502 | MsG0380017559.01.T01:intron | 35.0% | |
| ! | AATGTGCCTTTTCCAATGTT+AGG | - | Chr3:97865054-97865073 | MsG0380017559.01.T01:three_prime_UTR | 35.0% |
| ! | ACAGACATGGTGTTTTCAAA+AGG | + | Chr3:97867854-97867873 | None:intergenic | 35.0% |
| ! | ACTTTCAAGGTTGGCATTTT+GGG | - | Chr3:97865680-97865699 | MsG0380017559.01.T01:three_prime_UTR | 35.0% |
| ! | ATGGGGTGTTCTTAATTTCT+TGG | - | Chr3:97866879-97866898 | MsG0380017559.01.T01:CDS | 35.0% |
| ! | ATTGGAAAAGGCACATTATG+AGG | + | Chr3:97865051-97865070 | None:intergenic | 35.0% |
| ! | CTTTAACCATTTTGTTCCAG+AGG | - | Chr3:97867730-97867749 | MsG0380017559.01.T01:intron | 35.0% |
| ! | CTTTGGAAATCAGAAGTATG+AGG | + | Chr3:97865724-97865743 | None:intergenic | 35.0% |
| ! | GCATTTGTGTTTCTGAGTTT+AGG | + | Chr3:97866231-97866250 | None:intergenic | 35.0% |
| ! | TACTTTCAAGGTTGGCATTT+TGG | - | Chr3:97865679-97865698 | MsG0380017559.01.T01:three_prime_UTR | 35.0% |
| ! | TAGATGGTCTTTTGTGAACA+AGG | - | Chr3:97866787-97866806 | MsG0380017559.01.T01:intron | 35.0% |
| ! | TGCACAAATTGACTTTATGC+AGG | - | Chr3:97866344-97866363 | MsG0380017559.01.T01:intron | 35.0% |
| ! | TTAGCTTTCTTAACAGGTTC+TGG | + | Chr3:97868091-97868110 | None:intergenic | 35.0% |
| ! | TTGTTGCTTACTTTCAAGGT+TGG | - | Chr3:97865671-97865690 | MsG0380017559.01.T01:three_prime_UTR | 35.0% |
| ! | TTTGTTTCTTATCCAATCCG+TGG | - | Chr3:97865834-97865853 | MsG0380017559.01.T01:three_prime_UTR | 35.0% |
| !! | TGCTTGGTGCTATTAAGAAA+AGG | - | Chr3:97865548-97865567 | MsG0380017559.01.T01:three_prime_UTR | 35.0% |
| !! | TTCAAGGTTGATGATGTTGA+AGG | - | Chr3:97865931-97865950 | MsG0380017559.01.T01:three_prime_UTR | 35.0% |
| !!! | GATTGGATTTTTCAAGTTGG+TGG | - | Chr3:97865317-97865336 | MsG0380017559.01.T01:three_prime_UTR | 35.0% |
| !!! | TCCAGCAATTTTGAAATCTG+AGG | - | Chr3:97867298-97867317 | MsG0380017559.01.T01:intron | 35.0% |
| !!! | TTTTTCAAGTTGGTGGATGA+AGG | - | Chr3:97865324-97865343 | MsG0380017559.01.T01:three_prime_UTR | 35.0% |
| AAACCATATGGAACCACCTT+TGG | + | Chr3:97865741-97865760 | None:intergenic | 40.0% | |
| AAGTAGAACAGCAGGTCAAT+GGG | - | Chr3:97866861-97866880 | MsG0380017559.01.T01:CDS | 40.0% | |
| AATGGATCCCCATTGATCAT+TGG | + | Chr3:97865913-97865932 | None:intergenic | 40.0% | |
| ACCTCTTTCTCATTGCACAT+TGG | + | Chr3:97865994-97866013 | None:intergenic | 40.0% | |
| AGAAGTCTGTTATCTGCACA+AGG | - | Chr3:97868165-97868184 | MsG0380017559.01.T01:CDS | 40.0% | |
| AGAGAGTTCTTCAGGATCTT+TGG | + | Chr3:97867158-97867177 | None:intergenic | 40.0% | |
| ATAGTGTGTTTCACGTTCCA+AGG | - | Chr3:97868313-97868332 | MsG0380017559.01.T01:CDS | 40.0% | |
| ATCAAAGCCCTAGAAGAATC+TGG | - | Chr3:97866929-97866948 | MsG0380017559.01.T01:CDS | 40.0% | |
| ATGAACTCTGCTCAGACATT+TGG | + | Chr3:97868748-97868767 | None:intergenic | 40.0% | |
| CAATCAAATCAAGGCCTACA+AGG | + | Chr3:97868231-97868250 | None:intergenic | 40.0% | |
| CACAGCCTAAAAGTTTGCAT+AGG | + | Chr3:97867275-97867294 | None:intergenic | 40.0% | |
| CAGAGGCAGAAATTCCTTTA+TGG | - | Chr3:97867747-97867766 | MsG0380017559.01.T01:intron | 40.0% | |
| CATAAAGGAATTTCTGCCTC+TGG | + | Chr3:97867749-97867768 | None:intergenic | 40.0% | |
| CCTGCTGTTCTACTTCAAAA+TGG | + | Chr3:97866856-97866875 | None:intergenic | 40.0% | |
| CTGAGTCATATGAAGCTTAC+AGG | - | Chr3:97867222-97867241 | MsG0380017559.01.T01:intron | 40.0% | |
| CTGTAAGCTTCATATGACTC+AGG | + | Chr3:97867224-97867243 | None:intergenic | 40.0% | |
| GACTGCAACTTATAGAGTGT+GGG | + | Chr3:97868413-97868432 | None:intergenic | 40.0% | |
| GGAACAAAAATGCAGAGTGA+GGG | + | Chr3:97865094-97865113 | None:intergenic | 40.0% | |
| GGATAATCCTGAACTAGGTT+TGG | - | Chr3:97866758-97866777 | MsG0380017559.01.T01:intron | 40.0% | |
| GGTTAAGCCAATGATCAATG+GGG | - | Chr3:97865903-97865922 | MsG0380017559.01.T01:three_prime_UTR | 40.0% | |
| GTATCTGGACTCTTCCAATT+GGG | - | Chr3:97867893-97867912 | MsG0380017559.01.T01:CDS | 40.0% | |
| TACAGTGGTTAATTAGGCTG+AGG | - | Chr3:97866460-97866479 | MsG0380017559.01.T01:intron | 40.0% | |
| TATGTTGTAGAGCTATAGCG+TGG | + | Chr3:97867490-97867509 | None:intergenic | 40.0% | |
| TCAAAGCCCTAGAAGAATCT+GGG | - | Chr3:97866930-97866949 | MsG0380017559.01.T01:CDS | 40.0% | |
| TCCAATGTGCAATGAGAAAG+AGG | - | Chr3:97865990-97866009 | MsG0380017559.01.T01:three_prime_UTR | 40.0% | |
| TCTGCTCTCCAATCAAATCA+AGG | + | Chr3:97868240-97868259 | None:intergenic | 40.0% | |
| TGAATCAGTAAACGATCCCT+TGG | + | Chr3:97866411-97866430 | None:intergenic | 40.0% | |
| TGGAACAAAAATGCAGAGTG+AGG | + | Chr3:97865095-97865114 | None:intergenic | 40.0% | |
| TGGAACGTGAAACACACTAT+TGG | + | Chr3:97868313-97868332 | None:intergenic | 40.0% | |
| TGGATGAAGGATTCACAGAA+AGG | - | Chr3:97865337-97865356 | MsG0380017559.01.T01:three_prime_UTR | 40.0% | |
| TGGATTGTCACAAAGAAAGC+TGG | - | Chr3:97867929-97867948 | MsG0380017559.01.T01:CDS | 40.0% | |
| TTAGGTGCAGGAGAATGTTA+AGG | + | Chr3:97867805-97867824 | None:intergenic | 40.0% | |
| TTCACAAAAGACCATCTAGC+TGG | + | Chr3:97866785-97866804 | None:intergenic | 40.0% | |
| TTGTCACAAAGAAAGCTGGA+AGG | - | Chr3:97867933-97867952 | MsG0380017559.01.T01:CDS | 40.0% | |
| TTTCCAAAGGTGGTTCCATA+TGG | - | Chr3:97865735-97865754 | MsG0380017559.01.T01:three_prime_UTR | 40.0% | |
| ! | ACCCGAAACAAAGAAGCATA+CGG | + | Chr3:97865861-97865880 | None:intergenic | 40.0% |
| ! | ACCGTATGCTTCTTTGTTTC+GGG | - | Chr3:97865857-97865876 | MsG0380017559.01.T01:three_prime_UTR | 40.0% |
| ! | CTGATGATAAGAGCATACAG+TGG | - | Chr3:97866445-97866464 | MsG0380017559.01.T01:intron | 40.0% |
| ! | CTTGTAGGCCTTGATTTGAT+TGG | - | Chr3:97868229-97868248 | MsG0380017559.01.T01:CDS | 40.0% |
| ! | GACATGGTGTTTTCAAAAGG+AGG | + | Chr3:97867851-97867870 | None:intergenic | 40.0% |
| ! | GACATTTGGAATGGTGAGAT+AGG | + | Chr3:97868734-97868753 | None:intergenic | 40.0% |
| ! | GACCGTATGCTTCTTTGTTT+CGG | - | Chr3:97865856-97865875 | MsG0380017559.01.T01:three_prime_UTR | 40.0% |
| ! | GAGGTTGTTGCTTACTTTCA+AGG | - | Chr3:97865667-97865686 | MsG0380017559.01.T01:three_prime_UTR | 40.0% |
| ! | GCTTTGTGCTATTGTATTGC+TGG | + | Chr3:97868435-97868454 | None:intergenic | 40.0% |
| ! | GGTGTTTTCAAAAGGAGGTA+AGG | + | Chr3:97867846-97867865 | None:intergenic | 40.0% |
| !! | AACTTCGAAAGTGCCTGAAT+TGG | + | Chr3:97865805-97865824 | None:intergenic | 40.0% |
| !! | ACTGTTCTTTGGGATTTGCT+TGG | - | Chr3:97865532-97865551 | MsG0380017559.01.T01:three_prime_UTR | 40.0% |
| !! | CTGTTCTGAGAGTTTCAGAA+AGG | + | Chr3:97868477-97868496 | None:intergenic | 40.0% |
| !! | GTAAATAAAATGGTGTCGGC+AGG | - | Chr3:97868905-97868924 | MsG0380017559.01.T01:five_prime_UTR | 40.0% |
| !! | TGCATTCCAGTTTTGCTATG+AGG | - | Chr3:97866029-97866048 | MsG0380017559.01.T01:three_prime_UTR | 40.0% |
| !! | TGGTGCTATTAAGAAAAGGC+TGG | - | Chr3:97865552-97865571 | MsG0380017559.01.T01:three_prime_UTR | 40.0% |
| !! | TTCTTTGTTTCGGGTGGTTT+TGG | - | Chr3:97865866-97865885 | MsG0380017559.01.T01:three_prime_UTR | 40.0% |
| !! | TTTCTGCCTCTGGAACAAAA+TGG | + | Chr3:97867739-97867758 | None:intergenic | 40.0% |
| !!! | CCATTTTGAAGTAGAACAGC+AGG | - | Chr3:97866853-97866872 | MsG0380017559.01.T01:CDS | 40.0% |
| !!! | TTTGGCTGTTTTGGCTTTTG+AGG | - | Chr3:97865648-97865667 | MsG0380017559.01.T01:three_prime_UTR | 40.0% |
| AAAGCCCTAGAAGAATCTGG+GGG | - | Chr3:97866932-97866951 | MsG0380017559.01.T01:CDS | 45.0% | |
| ACAAGGAAGAATGTCATCCC+TGG | + | Chr3:97868214-97868233 | None:intergenic | 45.0% | |
| AGGGAGTGGCTGTTGAAAAA+GGG | - | Chr3:97865584-97865603 | MsG0380017559.01.T01:three_prime_UTR | 45.0% | |
| AGGTGAAGGAGTAAAAGGGA+AGG | + | Chr3:97867693-97867712 | None:intergenic | 45.0% | |
| AGTAGAACAGCAGGTCAATG+GGG | - | Chr3:97866862-97866881 | MsG0380017559.01.T01:CDS | 45.0% | |
| ATGGTGCAGATGCTGCATTT+AGG | - | Chr3:97865413-97865432 | MsG0380017559.01.T01:three_prime_UTR | 45.0% | |
| CAAAGCCCTAGAAGAATCTG+GGG | - | Chr3:97866931-97866950 | MsG0380017559.01.T01:CDS | 45.0% | |
| CATAATCTATCGGCATCGCT+TGG | - | Chr3:97866513-97866532 | MsG0380017559.01.T01:CDS | 45.0% | |
| CTACATTGCTCCACCAATTC+AGG | - | Chr3:97865789-97865808 | MsG0380017559.01.T01:three_prime_UTR | 45.0% | |
| CTCTGCTCAGACATTTGGAA+TGG | + | Chr3:97868743-97868762 | None:intergenic | 45.0% | |
| CTGCAGTGTGTCAAATGGAT+TGG | - | Chr3:97866385-97866404 | MsG0380017559.01.T01:intron | 45.0% | |
| CTTGGTTTCAATGGAACTGC+TGG | - | Chr3:97866897-97866916 | MsG0380017559.01.T01:CDS | 45.0% | |
| CTTGTTTAGCATTCTTGCCG+CGG | + | Chr3:97865453-97865472 | None:intergenic | 45.0% | |
| GAAGTAGAACAGCAGGTCAA+TGG | - | Chr3:97866860-97866879 | MsG0380017559.01.T01:CDS | 45.0% | |
| GATCAATGGGGATCCATTCA+AGG | - | Chr3:97865915-97865934 | MsG0380017559.01.T01:three_prime_UTR | 45.0% | |
| GCAAAACTGTGCCACATTCA+AGG | - | Chr3:97866653-97866672 | MsG0380017559.01.T01:intron | 45.0% | |
| GGACTGCAACTTATAGAGTG+TGG | + | Chr3:97868414-97868433 | None:intergenic | 45.0% | |
| GGGATGACATTCTTCCTTGT+AGG | - | Chr3:97868214-97868233 | MsG0380017559.01.T01:CDS | 45.0% | |
| GGTATCTGGACTCTTCCAAT+TGG | - | Chr3:97867892-97867911 | MsG0380017559.01.T01:CDS | 45.0% | |
| GTGACACTGAAATGGGTACT+AGG | + | Chr3:97864938-97864957 | None:intergenic | 45.0% | |
| TAGGCTGAGGTTTCTCTAAG+TGG | - | Chr3:97866473-97866492 | MsG0380017559.01.T01:intron | 45.0% | |
| TTCAATGGAACTGCTGGTGT+TGG | - | Chr3:97866903-97866922 | MsG0380017559.01.T01:CDS | 45.0% | |
| TTCACAGAAAGGAACACCAG+TGG | - | Chr3:97865348-97865367 | MsG0380017559.01.T01:three_prime_UTR | 45.0% | |
| ! | AACACCAGTGGTGGTGAAAA+TGG | - | Chr3:97865360-97865379 | MsG0380017559.01.T01:three_prime_UTR | 45.0% |
| ! | ACAAAGAAGCATACGGTCCA+CGG | + | Chr3:97865854-97865873 | None:intergenic | 45.0% |
| ! | CAGGGCCTATGCAAACTTTT+AGG | - | Chr3:97867267-97867286 | MsG0380017559.01.T01:intron | 45.0% |
| ! | GTATGCTTCTTTGTTTCGGG+TGG | - | Chr3:97865860-97865879 | MsG0380017559.01.T01:three_prime_UTR | 45.0% |
| ! | TTGCCGCGGTTTTTATCTAC+CGG | + | Chr3:97865439-97865458 | None:intergenic | 45.0% |
| !! | AAAAGGCTGGTTCGTAGACA+GGG | - | Chr3:97865565-97865584 | MsG0380017559.01.T01:three_prime_UTR | 45.0% |
| !! | GTGTCAAATGGATTGGCCAA+GGG | - | Chr3:97866392-97866411 | MsG0380017559.01.T01:intron | 45.0% |
| !! | TCTATATAGGCACTGGTCAC+TGG | - | Chr3:97868594-97868613 | MsG0380017559.01.T01:five_prime_UTR | 45.0% |
| !! | TGTGTCAAATGGATTGGCCA+AGG | - | Chr3:97866391-97866410 | MsG0380017559.01.T01:intron | 45.0% |
| !! | TTCGAAAGTGCCTGAATTGG+TGG | + | Chr3:97865802-97865821 | None:intergenic | 45.0% |
| ACAGAAAGGAACACCAGTGG+TGG | - | Chr3:97865351-97865370 | MsG0380017559.01.T01:three_prime_UTR | 50.0% | |
| AGCTGGACCAAACCTAGTTC+AGG | + | Chr3:97866768-97866787 | None:intergenic | 50.0% | |
| AGGCCGGTAGATAAAAACCG+CGG | - | Chr3:97865433-97865452 | MsG0380017559.01.T01:three_prime_UTR | 50.0% | |
| CAGGGAGTGGCTGTTGAAAA+AGG | - | Chr3:97865583-97865602 | MsG0380017559.01.T01:three_prime_UTR | 50.0% | |
| CGTGTCAGCGCACAATTGAA+TGG | + | Chr3:97868375-97868394 | None:intergenic | 50.0% | |
| CTTAAAGCTCATCGTGCCGT+TGG | - | Chr3:97865490-97865509 | MsG0380017559.01.T01:three_prime_UTR | 50.0% | |
| GGTCAGGACTGGATATAAGC+TGG | - | Chr3:97866534-97866553 | MsG0380017559.01.T01:CDS | 50.0% | |
| TCCAACCATTGAGGTGAGCT+CGG | + | Chr3:97867000-97867019 | None:intergenic | 50.0% | |
| TGCAGATGCTGCATTTAGGC+CGG | - | Chr3:97865417-97865436 | MsG0380017559.01.T01:three_prime_UTR | 50.0% | |
| ! | ACCAGTGGTGGTGAAAATGG+AGG | - | Chr3:97865363-97865382 | MsG0380017559.01.T01:three_prime_UTR | 50.0% |
| ! | CTAGGTTTGGTCCAGCTAGA+TGG | - | Chr3:97866771-97866790 | MsG0380017559.01.T01:intron | 50.0% |
| ! | GTGCCGTTGGTTGTGTTACT+TGG | - | Chr3:97865503-97865522 | MsG0380017559.01.T01:three_prime_UTR | 50.0% |
| ! | TCCTCCATTTTCACCACCAC+TGG | + | Chr3:97865367-97865386 | None:intergenic | 50.0% |
| ! | TTTAACTGCAGGTGTCACCG+TGG | - | Chr3:97867620-97867639 | MsG0380017559.01.T01:intron | 50.0% |
| !! | GAAAAGGCTGGTTCGTAGAC+AGG | - | Chr3:97865564-97865583 | MsG0380017559.01.T01:three_prime_UTR | 50.0% |
| AGCAACACCGCTGGCATTCA+GGG | - | Chr3:97867249-97867268 | MsG0380017559.01.T01:intron | 55.0% | |
| CAACACGGGTTCAGCATCCT+TGG | + | Chr3:97868333-97868352 | None:intergenic | 55.0% | |
| CACAGAGGAGCTTCTGACAG+TGG | - | Chr3:97868023-97868042 | MsG0380017559.01.T01:CDS | 55.0% | |
| CCAGCCCCCAGATTCTTCTA+GGG | + | Chr3:97866939-97866958 | None:intergenic | 55.0% | |
| GAAGCATACGGTCCACGGAT+TGG | + | Chr3:97865849-97865868 | None:intergenic | 55.0% | |
| TCCGAGCTCACCTCAATGGT+TGG | - | Chr3:97866996-97867015 | MsG0380017559.01.T01:CDS | 55.0% | |
| TCTATCGGCATCGCTTGGTC+AGG | - | Chr3:97866518-97866537 | MsG0380017559.01.T01:CDS | 55.0% | |
| ACAGGAAGCAGCAACACCGC+TGG | - | Chr3:97867240-97867259 | MsG0380017559.01.T01:intron | 60.0% | |
| CAGCAACACCGCTGGCATTC+AGG | - | Chr3:97867248-97867267 | MsG0380017559.01.T01:intron | 60.0% | |
| CCCTAGAAGAATCTGGGGGC+TGG | - | Chr3:97866936-97866955 | MsG0380017559.01.T01:CDS | 60.0% | |
| GCATAGGCCCTGAATGCCAG+CGG | + | Chr3:97867259-97867278 | None:intergenic | 60.0% | |
| GCCAGCCCCCAGATTCTTCT+AGG | + | Chr3:97866940-97866959 | None:intergenic | 60.0% | |
| GCTGTCCGAGCTCACCTCAA+TGG | - | Chr3:97866992-97867011 | MsG0380017559.01.T01:CDS | 60.0% | |
| ! | AGAAGAATCTGGGGGCTGGC+TGG | - | Chr3:97866940-97866959 | MsG0380017559.01.T01:CDS | 60.0% |
| !! | GCTGGTTCGTAGACAGGGAG+TGG | - | Chr3:97865570-97865589 | MsG0380017559.01.T01:three_prime_UTR | 60.0% |
| CGGCATCGCTTGGTCAGGAC+TGG | - | Chr3:97866523-97866542 | MsG0380017559.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 97864890 | 97868933 | 97864890 | ID=MsG0380017559.01;Name=MsG0380017559.01 |
| Chr3 | mRNA | 97864890 | 97868933 | 97864890 | ID=MsG0380017559.01.T01;Parent=MsG0380017559.01;Name=MsG0380017559.01.T01;_AED=0.09;_eAED=0.09;_QI=417|0.5|0.6|1|0.75|0.8|5|1198|420 |
| Chr3 | exon | 97864890 | 97866192 | 97864890 | ID=MsG0380017559.01.T01:exon:21403;Parent=MsG0380017559.01.T01 |
| Chr3 | exon | 97866504 | 97866616 | 97866504 | ID=MsG0380017559.01.T01:exon:21402;Parent=MsG0380017559.01.T01 |
| Chr3 | exon | 97866810 | 97867048 | 97866810 | ID=MsG0380017559.01.T01:exon:21401;Parent=MsG0380017559.01.T01 |
| Chr3 | exon | 97867357 | 97867457 | 97867357 | ID=MsG0380017559.01.T01:exon:21400;Parent=MsG0380017559.01.T01 |
| Chr3 | exon | 97867812 | 97868933 | 97867812 | ID=MsG0380017559.01.T01:exon:21399;Parent=MsG0380017559.01.T01 |
| Chr3 | five_prime_UTR | 97868517 | 97868933 | 97868517 | ID=MsG0380017559.01.T01:five_prime_utr;Parent=MsG0380017559.01.T01 |
| Chr3 | CDS | 97867812 | 97868516 | 97867812 | ID=MsG0380017559.01.T01:cds;Parent=MsG0380017559.01.T01 |
| Chr3 | CDS | 97867357 | 97867457 | 97867357 | ID=MsG0380017559.01.T01:cds;Parent=MsG0380017559.01.T01 |
| Chr3 | CDS | 97866810 | 97867048 | 97866810 | ID=MsG0380017559.01.T01:cds;Parent=MsG0380017559.01.T01 |
| Chr3 | CDS | 97866504 | 97866616 | 97866504 | ID=MsG0380017559.01.T01:cds;Parent=MsG0380017559.01.T01 |
| Chr3 | CDS | 97866088 | 97866192 | 97866088 | ID=MsG0380017559.01.T01:cds;Parent=MsG0380017559.01.T01 |
| Chr3 | three_prime_UTR | 97864890 | 97866087 | 97864890 | ID=MsG0380017559.01.T01:three_prime_utr;Parent=MsG0380017559.01.T01 |
| Gene Sequence |
| Protein sequence |
