Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025463.01.T01 | XP_003612656.3 | 93.534 | 232 | 15 | 0 | 1 | 232 | 1 | 232 | 1.56E-159 | 453 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025463.01.T01 | C0SVS4 | 58.216 | 213 | 80 | 6 | 2 | 208 | 1 | 210 | 5.43E-69 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025463.01.T01 | A0A396HMZ0 | 93.534 | 232 | 15 | 0 | 1 | 232 | 1 | 232 | 7.43e-160 | 453 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048633.01 | MsG0580025463.01 | 0.805475 | 1.311189e-49 | 6.943445e-47 |
| MsG0180000556.01 | MsG0580025463.01 | 0.825285 | 5.094482e-54 | 4.623528e-51 |
| MsG0180004124.01 | MsG0580025463.01 | -0.813238 | 2.832133e-51 | 1.839319e-48 |
| MsG0180004125.01 | MsG0580025463.01 | -0.812278 | 4.594405e-51 | 2.908819e-48 |
| MsG0180004559.01 | MsG0580025463.01 | 0.800286 | 1.547703e-48 | 7.178950e-46 |
| MsG0180004688.01 | MsG0580025463.01 | 0.805886 | 1.075005e-49 | 5.753285e-47 |
| MsG0180005369.01 | MsG0580025463.01 | -0.808597 | 2.864221e-50 | 1.644458e-47 |
| MsG0280010617.01 | MsG0580025463.01 | 0.816748 | 4.711970e-52 | 3.367290e-49 |
| MsG0480021175.01 | MsG0580025463.01 | 0.828998 | 6.581445e-55 | 6.648707e-52 |
| MsG0480023575.01 | MsG0580025463.01 | 0.800339 | 1.509396e-48 | 7.010791e-46 |
| MsG0580025463.01 | MsG0880043261.01 | 0.808612 | 2.843389e-50 | 1.633090e-47 |
| MsG0580025463.01 | MsG0880046174.01 | -0.805903 | 1.066083e-49 | 5.708014e-47 |
| MsG0380016031.01 | MsG0580025463.01 | 0.816977 | 4.186516e-52 | 3.010822e-49 |
| MsG0380016845.01 | MsG0580025463.01 | 0.808262 | 3.376518e-50 | 1.921814e-47 |
| MsG0380017231.01 | MsG0580025463.01 | 0.801629 | 8.227436e-49 | 3.947997e-46 |
| MsG0380017380.01 | MsG0580025463.01 | 0.807114 | 5.921651e-50 | 3.270431e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025463.01.T01 | MTR_5g027440 | 93.534 | 232 | 15 | 0 | 1 | 232 | 1 | 232 | 1.99e-163 | 452 |
| MsG0580025463.01.T01 | MTR_2g086450 | 50.000 | 194 | 71 | 4 | 18 | 193 | 38 | 223 | 4.34e-52 | 173 |
| MsG0580025463.01.T01 | MTR_6g444980 | 48.744 | 199 | 74 | 6 | 10 | 193 | 22 | 207 | 7.12e-52 | 172 |
| MsG0580025463.01.T01 | MTR_6g032990 | 49.500 | 200 | 77 | 5 | 18 | 204 | 35 | 223 | 6.43e-50 | 168 |
| MsG0580025463.01.T01 | MTR_6g444980 | 49.718 | 177 | 74 | 4 | 10 | 184 | 22 | 185 | 1.08e-48 | 163 |
| MsG0580025463.01.T01 | MTR_7g088070 | 54.545 | 143 | 52 | 1 | 25 | 167 | 50 | 179 | 1.58e-48 | 161 |
| MsG0580025463.01.T01 | MTR_7g088070 | 55.862 | 145 | 51 | 3 | 25 | 167 | 50 | 183 | 8.96e-47 | 156 |
| MsG0580025463.01.T01 | MTR_4g081710 | 46.196 | 184 | 88 | 4 | 18 | 194 | 10 | 189 | 3.74e-45 | 154 |
| MsG0580025463.01.T01 | MTR_1g090670 | 51.923 | 156 | 67 | 4 | 18 | 171 | 37 | 186 | 4.64e-43 | 147 |
| MsG0580025463.01.T01 | MTR_2g027800 | 50.000 | 170 | 75 | 5 | 7 | 171 | 20 | 184 | 8.79e-43 | 147 |
| MsG0580025463.01.T01 | MTR_5g041350 | 50.000 | 156 | 72 | 4 | 19 | 171 | 9 | 161 | 1.35e-42 | 147 |
| MsG0580025463.01.T01 | MTR_2g027860 | 51.049 | 143 | 60 | 1 | 25 | 167 | 49 | 181 | 2.97e-42 | 146 |
| MsG0580025463.01.T01 | MTR_2g027800 | 46.988 | 166 | 72 | 4 | 7 | 171 | 20 | 170 | 1.59e-39 | 138 |
| MsG0580025463.01.T01 | MTR_7g098250 | 49.645 | 141 | 59 | 2 | 25 | 165 | 262 | 390 | 5.45e-37 | 135 |
| MsG0580025463.01.T01 | MTR_7g115530 | 46.012 | 163 | 76 | 3 | 25 | 187 | 218 | 368 | 6.04e-37 | 134 |
| MsG0580025463.01.T01 | MTR_1g080330 | 45.270 | 148 | 69 | 2 | 18 | 165 | 168 | 303 | 1.91e-34 | 127 |
| MsG0580025463.01.T01 | MTR_1g053835 | 44.755 | 143 | 65 | 2 | 25 | 167 | 258 | 386 | 3.11e-33 | 124 |
| MsG0580025463.01.T01 | MTR_7g093030 | 39.735 | 151 | 70 | 4 | 25 | 171 | 212 | 345 | 1.42e-30 | 117 |
| MsG0580025463.01.T01 | MTR_1g080330 | 45.669 | 127 | 57 | 2 | 18 | 144 | 168 | 282 | 8.83e-28 | 107 |
| MsG0580025463.01.T01 | MTR_7g115530 | 48.333 | 120 | 50 | 3 | 25 | 144 | 218 | 325 | 5.35e-27 | 106 |
| MsG0580025463.01.T01 | MTR_7g068600 | 39.161 | 143 | 68 | 3 | 25 | 162 | 13 | 141 | 2.71e-24 | 97.1 |
| MsG0580025463.01.T01 | MTR_7g115530 | 56.923 | 65 | 28 | 0 | 25 | 89 | 218 | 282 | 5.73e-21 | 89.4 |
| MsG0580025463.01.T01 | MTR_7g115530 | 51.316 | 76 | 36 | 1 | 25 | 100 | 218 | 292 | 3.00e-20 | 88.2 |
| MsG0580025463.01.T01 | MTR_7g093030 | 57.895 | 57 | 24 | 0 | 25 | 81 | 212 | 268 | 4.83e-20 | 87.0 |
| MsG0580025463.01.T01 | MTR_1g053800 | 33.714 | 175 | 92 | 4 | 12 | 178 | 159 | 317 | 7.28e-20 | 86.7 |
| MsG0580025463.01.T01 | MTR_1g053830 | 55.357 | 56 | 25 | 0 | 27 | 82 | 20 | 75 | 3.74e-19 | 79.7 |
| MsG0580025463.01.T01 | MTR_2g023580 | 61.905 | 63 | 24 | 0 | 16 | 78 | 46 | 108 | 4.54e-19 | 83.2 |
| MsG0580025463.01.T01 | MTR_1g112370 | 55.128 | 78 | 32 | 1 | 1 | 78 | 1 | 75 | 1.09e-18 | 83.6 |
| MsG0580025463.01.T01 | MTR_7g069660 | 62.069 | 58 | 22 | 0 | 21 | 78 | 67 | 124 | 1.49e-18 | 83.6 |
| MsG0580025463.01.T01 | MTR_0223s0040 | 58.209 | 67 | 28 | 0 | 12 | 78 | 5 | 71 | 1.67e-18 | 82.4 |
| MsG0580025463.01.T01 | MTR_7g115530 | 65.385 | 52 | 18 | 0 | 25 | 76 | 218 | 269 | 2.41e-18 | 82.0 |
| MsG0580025463.01.T01 | MTR_6g071625 | 61.667 | 60 | 23 | 0 | 26 | 85 | 203 | 262 | 8.45e-18 | 81.6 |
| MsG0580025463.01.T01 | MTR_8g066310 | 69.811 | 53 | 16 | 0 | 26 | 78 | 174 | 226 | 1.22e-17 | 80.9 |
| MsG0580025463.01.T01 | MTR_7g115530 | 62.264 | 53 | 20 | 0 | 25 | 77 | 218 | 270 | 1.36e-17 | 80.1 |
| MsG0580025463.01.T01 | MTR_5g029470 | 69.811 | 53 | 16 | 0 | 26 | 78 | 220 | 272 | 3.99e-17 | 79.7 |
| MsG0580025463.01.T01 | MTR_1g021520 | 67.925 | 53 | 17 | 0 | 26 | 78 | 127 | 179 | 4.78e-17 | 78.6 |
| MsG0580025463.01.T01 | MTR_8g086410 | 51.389 | 72 | 28 | 1 | 7 | 78 | 100 | 164 | 5.76e-17 | 79.7 |
| MsG0580025463.01.T01 | MTR_2g084230 | 60.345 | 58 | 23 | 0 | 21 | 78 | 93 | 150 | 5.83e-17 | 78.6 |
| MsG0580025463.01.T01 | MTR_2g084230 | 51.316 | 76 | 31 | 1 | 3 | 78 | 81 | 150 | 6.25e-17 | 79.3 |
| MsG0580025463.01.T01 | MTR_8g086410 | 51.389 | 72 | 28 | 1 | 7 | 78 | 98 | 162 | 6.55e-17 | 79.3 |
| MsG0580025463.01.T01 | MTR_3g064840 | 67.925 | 53 | 17 | 0 | 26 | 78 | 275 | 327 | 1.09e-16 | 79.0 |
| MsG0580025463.01.T01 | MTR_3g450310 | 48.611 | 72 | 30 | 1 | 7 | 78 | 8 | 72 | 1.10e-16 | 76.3 |
| MsG0580025463.01.T01 | MTR_1g090670 | 43.590 | 117 | 58 | 4 | 57 | 171 | 1 | 111 | 2.41e-16 | 75.5 |
| MsG0580025463.01.T01 | MTR_2g016220 | 49.333 | 75 | 38 | 0 | 4 | 78 | 68 | 142 | 5.94e-16 | 76.3 |
| MsG0580025463.01.T01 | MTR_2g016220 | 49.333 | 75 | 38 | 0 | 4 | 78 | 68 | 142 | 6.57e-16 | 76.3 |
| MsG0580025463.01.T01 | MTR_8g086410 | 48.611 | 72 | 30 | 1 | 7 | 78 | 100 | 164 | 1.20e-15 | 75.9 |
| MsG0580025463.01.T01 | MTR_7g093010 | 36.242 | 149 | 73 | 5 | 25 | 168 | 213 | 344 | 3.58e-15 | 73.9 |
| MsG0580025463.01.T01 | MTR_2g016220 | 48.611 | 72 | 37 | 0 | 4 | 75 | 68 | 139 | 2.01e-14 | 72.0 |
| MsG0580025463.01.T01 | MTR_4g121020 | 58.182 | 55 | 22 | 1 | 25 | 79 | 111 | 164 | 2.57e-13 | 68.9 |
| MsG0580025463.01.T01 | MTR_4g121020 | 58.182 | 55 | 22 | 1 | 25 | 79 | 215 | 268 | 3.09e-13 | 68.9 |
| MsG0580025463.01.T01 | MTR_4g121020 | 58.182 | 55 | 22 | 1 | 25 | 79 | 215 | 268 | 3.12e-13 | 68.9 |
| MsG0580025463.01.T01 | MTR_5g017980 | 47.222 | 72 | 36 | 1 | 25 | 96 | 193 | 262 | 2.31e-12 | 65.9 |
| MsG0580025463.01.T01 | MTR_2g450070 | 52.727 | 55 | 25 | 1 | 25 | 79 | 213 | 266 | 3.49e-12 | 65.9 |
| MsG0580025463.01.T01 | MTR_7g089010 | 56.364 | 55 | 23 | 1 | 25 | 79 | 91 | 144 | 3.80e-12 | 65.1 |
| MsG0580025463.01.T01 | MTR_2g450070 | 52.727 | 55 | 25 | 1 | 25 | 79 | 213 | 266 | 3.84e-12 | 65.9 |
| MsG0580025463.01.T01 | MTR_4g113140 | 40.196 | 102 | 48 | 2 | 25 | 115 | 235 | 334 | 4.50e-12 | 65.1 |
| MsG0580025463.01.T01 | MTR_4g021790 | 47.692 | 65 | 31 | 2 | 25 | 89 | 168 | 229 | 4.65e-12 | 64.3 |
| MsG0580025463.01.T01 | MTR_1g032570 | 52.727 | 55 | 25 | 1 | 25 | 79 | 131 | 184 | 7.44e-12 | 64.7 |
| MsG0580025463.01.T01 | MTR_1g093080 | 50.820 | 61 | 28 | 1 | 25 | 85 | 211 | 269 | 7.53e-12 | 64.3 |
| MsG0580025463.01.T01 | MTR_4g064730 | 54.545 | 55 | 24 | 1 | 25 | 79 | 131 | 184 | 7.77e-12 | 63.9 |
| MsG0580025463.01.T01 | MTR_1g032570 | 52.727 | 55 | 25 | 1 | 25 | 79 | 200 | 253 | 8.83e-12 | 64.7 |
| MsG0580025463.01.T01 | MTR_4g086835 | 54.098 | 61 | 26 | 1 | 25 | 85 | 274 | 332 | 1.34e-11 | 63.9 |
| MsG0580025463.01.T01 | MTR_1g013170 | 54.237 | 59 | 26 | 1 | 21 | 79 | 187 | 244 | 1.50e-11 | 63.9 |
| MsG0580025463.01.T01 | MTR_4g131600 | 52.727 | 55 | 25 | 1 | 25 | 79 | 201 | 254 | 3.39e-11 | 62.8 |
| MsG0580025463.01.T01 | MTR_5g014040 | 44.286 | 70 | 38 | 1 | 27 | 96 | 313 | 381 | 4.79e-11 | 62.4 |
| MsG0580025463.01.T01 | MTR_5g017980 | 47.222 | 72 | 35 | 2 | 25 | 96 | 193 | 261 | 5.48e-11 | 61.6 |
| MsG0580025463.01.T01 | MTR_5g017980 | 47.222 | 72 | 35 | 2 | 25 | 96 | 192 | 260 | 5.78e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025463.01.T01 | AT5G45580 | 58.216 | 213 | 80 | 6 | 2 | 208 | 1 | 210 | 5.53e-70 | 216 |
| MsG0580025463.01.T01 | AT5G45580 | 60.000 | 195 | 70 | 5 | 20 | 208 | 2 | 194 | 8.30e-68 | 210 |
| MsG0580025463.01.T01 | AT3G24120 | 51.648 | 182 | 84 | 3 | 16 | 194 | 32 | 212 | 2.44e-57 | 184 |
| MsG0580025463.01.T01 | AT4G13640 | 49.143 | 175 | 87 | 1 | 16 | 188 | 28 | 202 | 1.99e-56 | 182 |
| MsG0580025463.01.T01 | AT3G24120 | 50.811 | 185 | 84 | 4 | 16 | 194 | 32 | 215 | 3.31e-55 | 179 |
| MsG0580025463.01.T01 | AT4G13640 | 48.315 | 178 | 87 | 2 | 16 | 188 | 28 | 205 | 2.81e-54 | 176 |
| MsG0580025463.01.T01 | AT3G04030 | 47.739 | 199 | 83 | 4 | 7 | 193 | 29 | 218 | 8.96e-53 | 175 |
| MsG0580025463.01.T01 | AT5G18240 | 47.396 | 192 | 94 | 3 | 7 | 193 | 29 | 218 | 2.96e-51 | 171 |
| MsG0580025463.01.T01 | AT5G18240 | 47.396 | 192 | 94 | 3 | 7 | 193 | 29 | 218 | 2.96e-51 | 171 |
| MsG0580025463.01.T01 | AT3G04030 | 46.734 | 199 | 84 | 5 | 7 | 193 | 29 | 217 | 1.07e-49 | 167 |
| MsG0580025463.01.T01 | AT1G79430 | 49.704 | 169 | 60 | 4 | 10 | 171 | 21 | 171 | 1.53e-48 | 163 |
| MsG0580025463.01.T01 | AT3G12730 | 46.667 | 165 | 70 | 4 | 18 | 173 | 16 | 171 | 3.24e-48 | 159 |
| MsG0580025463.01.T01 | AT3G04030 | 45.729 | 199 | 81 | 5 | 7 | 193 | 29 | 212 | 6.49e-48 | 162 |
| MsG0580025463.01.T01 | AT5G18240 | 46.354 | 192 | 94 | 4 | 7 | 193 | 29 | 216 | 7.09e-48 | 162 |
| MsG0580025463.01.T01 | AT5G18240 | 45.312 | 192 | 92 | 4 | 7 | 193 | 29 | 212 | 3.06e-46 | 158 |
| MsG0580025463.01.T01 | AT5G18240 | 45.312 | 192 | 92 | 4 | 7 | 193 | 29 | 212 | 3.06e-46 | 158 |
| MsG0580025463.01.T01 | AT1G69580 | 48.503 | 167 | 79 | 3 | 18 | 178 | 27 | 192 | 1.79e-44 | 152 |
| MsG0580025463.01.T01 | AT1G69580 | 47.619 | 168 | 80 | 3 | 18 | 178 | 27 | 193 | 1.02e-43 | 150 |
| MsG0580025463.01.T01 | AT2G01060 | 54.545 | 143 | 54 | 2 | 25 | 167 | 15 | 146 | 5.41e-43 | 147 |
| MsG0580025463.01.T01 | AT3G13040 | 45.000 | 160 | 78 | 2 | 25 | 181 | 241 | 393 | 1.99e-37 | 136 |
| MsG0580025463.01.T01 | AT3G13040 | 45.000 | 160 | 78 | 2 | 25 | 181 | 241 | 393 | 1.99e-37 | 136 |
| MsG0580025463.01.T01 | AT3G13040 | 45.000 | 160 | 78 | 2 | 25 | 181 | 241 | 393 | 1.99e-37 | 136 |
| MsG0580025463.01.T01 | AT4G28610 | 43.750 | 160 | 78 | 3 | 25 | 184 | 225 | 372 | 3.36e-34 | 127 |
| MsG0580025463.01.T01 | AT3G04450 | 46.154 | 143 | 68 | 2 | 25 | 167 | 198 | 331 | 7.10e-33 | 123 |
| MsG0580025463.01.T01 | AT3G04450 | 46.154 | 143 | 68 | 2 | 25 | 167 | 198 | 331 | 7.10e-33 | 123 |
| MsG0580025463.01.T01 | AT3G04450 | 46.154 | 143 | 68 | 2 | 25 | 167 | 238 | 371 | 1.20e-32 | 123 |
| MsG0580025463.01.T01 | AT5G06800 | 44.056 | 143 | 72 | 3 | 25 | 167 | 192 | 326 | 1.40e-32 | 122 |
| MsG0580025463.01.T01 | AT5G29000 | 45.139 | 144 | 68 | 3 | 25 | 167 | 188 | 321 | 2.56e-32 | 121 |
| MsG0580025463.01.T01 | AT5G29000 | 45.139 | 144 | 68 | 3 | 25 | 167 | 188 | 321 | 2.56e-32 | 121 |
| MsG0580025463.01.T01 | AT5G06800 | 44.755 | 143 | 66 | 3 | 25 | 167 | 192 | 321 | 4.08e-32 | 120 |
| MsG0580025463.01.T01 | AT5G29000 | 45.139 | 144 | 68 | 3 | 25 | 167 | 231 | 364 | 4.19e-32 | 121 |
| MsG0580025463.01.T01 | AT3G04030 | 45.638 | 149 | 62 | 3 | 57 | 193 | 1 | 142 | 5.30e-30 | 114 |
| MsG0580025463.01.T01 | AT2G20400 | 42.446 | 139 | 69 | 2 | 27 | 165 | 233 | 360 | 5.52e-27 | 107 |
| MsG0580025463.01.T01 | AT2G20400 | 42.446 | 139 | 68 | 2 | 27 | 165 | 233 | 359 | 4.55e-26 | 104 |
| MsG0580025463.01.T01 | AT3G04030 | 42.953 | 149 | 60 | 4 | 57 | 193 | 1 | 136 | 2.54e-25 | 101 |
| MsG0580025463.01.T01 | AT5G45580 | 46.479 | 142 | 68 | 5 | 73 | 208 | 16 | 155 | 3.68e-25 | 99.4 |
| MsG0580025463.01.T01 | AT5G18240 | 41.549 | 142 | 72 | 3 | 57 | 193 | 1 | 136 | 1.68e-24 | 99.4 |
| MsG0580025463.01.T01 | AT2G06020 | 52.941 | 85 | 34 | 1 | 3 | 81 | 58 | 142 | 1.35e-22 | 94.0 |
| MsG0580025463.01.T01 | AT1G79430 | 44.262 | 122 | 45 | 3 | 57 | 171 | 1 | 106 | 1.88e-22 | 93.6 |
| MsG0580025463.01.T01 | AT3G12730 | 38.095 | 126 | 60 | 4 | 57 | 173 | 1 | 117 | 2.02e-21 | 88.2 |
| MsG0580025463.01.T01 | AT2G01060 | 48.148 | 108 | 45 | 2 | 60 | 167 | 1 | 97 | 2.77e-21 | 89.4 |
| MsG0580025463.01.T01 | AT5G06800 | 58.621 | 58 | 24 | 0 | 25 | 82 | 192 | 249 | 5.75e-20 | 86.7 |
| MsG0580025463.01.T01 | AT2G42660 | 69.811 | 53 | 16 | 0 | 26 | 78 | 51 | 103 | 1.42e-19 | 85.1 |
| MsG0580025463.01.T01 | AT4G04605 | 55.556 | 63 | 28 | 0 | 16 | 78 | 5 | 67 | 2.70e-19 | 83.6 |
| MsG0580025463.01.T01 | AT2G02060 | 51.765 | 85 | 37 | 1 | 1 | 81 | 1 | 85 | 3.33e-19 | 84.0 |
| MsG0580025463.01.T01 | AT2G02060 | 51.765 | 85 | 37 | 1 | 1 | 81 | 1 | 85 | 3.33e-19 | 84.0 |
| MsG0580025463.01.T01 | AT1G14600 | 56.000 | 75 | 31 | 1 | 6 | 78 | 2 | 76 | 1.10e-18 | 82.4 |
| MsG0580025463.01.T01 | AT3G04450 | 56.897 | 58 | 25 | 0 | 25 | 82 | 238 | 295 | 2.15e-18 | 82.8 |
| MsG0580025463.01.T01 | AT2G40260 | 57.812 | 64 | 27 | 0 | 15 | 78 | 72 | 135 | 2.18e-18 | 83.6 |
| MsG0580025463.01.T01 | AT5G29000 | 52.174 | 69 | 33 | 0 | 25 | 93 | 231 | 299 | 2.81e-18 | 82.4 |
| MsG0580025463.01.T01 | AT1G32240 | 69.811 | 53 | 16 | 0 | 26 | 78 | 214 | 266 | 2.37e-17 | 80.5 |
| MsG0580025463.01.T01 | AT1G32240 | 69.811 | 53 | 16 | 0 | 26 | 78 | 214 | 266 | 3.01e-17 | 80.1 |
| MsG0580025463.01.T01 | AT4G04580 | 49.231 | 65 | 33 | 0 | 14 | 78 | 3 | 67 | 3.20e-17 | 76.6 |
| MsG0580025463.01.T01 | AT5G16560 | 67.925 | 53 | 17 | 0 | 26 | 78 | 220 | 272 | 4.00e-17 | 80.1 |
| MsG0580025463.01.T01 | AT5G42630 | 66.038 | 53 | 18 | 0 | 26 | 78 | 106 | 158 | 5.13e-17 | 77.4 |
| MsG0580025463.01.T01 | AT2G38300 | 60.345 | 58 | 23 | 0 | 21 | 78 | 50 | 107 | 7.07e-17 | 79.0 |
| MsG0580025463.01.T01 | AT5G42630 | 66.038 | 53 | 18 | 0 | 26 | 78 | 106 | 158 | 1.22e-16 | 77.4 |
| MsG0580025463.01.T01 | AT4G17695 | 66.038 | 53 | 18 | 0 | 26 | 78 | 165 | 217 | 2.03e-16 | 77.4 |
| MsG0580025463.01.T01 | AT4G37180 | 55.932 | 59 | 24 | 1 | 27 | 85 | 212 | 268 | 1.86e-13 | 68.9 |
| MsG0580025463.01.T01 | AT4G37180 | 55.932 | 59 | 24 | 1 | 27 | 85 | 219 | 275 | 2.15e-13 | 68.9 |
| MsG0580025463.01.T01 | AT3G10760 | 51.351 | 74 | 31 | 3 | 6 | 79 | 90 | 158 | 4.33e-13 | 67.8 |
| MsG0580025463.01.T01 | AT1G49560 | 48.780 | 82 | 40 | 1 | 25 | 106 | 192 | 271 | 4.58e-13 | 67.8 |
| MsG0580025463.01.T01 | AT4G04555 | 46.032 | 63 | 34 | 0 | 16 | 78 | 5 | 67 | 1.09e-12 | 62.8 |
| MsG0580025463.01.T01 | AT5G05090 | 56.364 | 55 | 23 | 1 | 25 | 79 | 81 | 134 | 1.39e-12 | 65.9 |
| MsG0580025463.01.T01 | AT3G25790 | 38.393 | 112 | 52 | 4 | 30 | 128 | 201 | 308 | 2.84e-12 | 65.9 |
| MsG0580025463.01.T01 | AT5G58080 | 56.364 | 55 | 23 | 1 | 25 | 79 | 194 | 247 | 3.05e-12 | 65.9 |
| MsG0580025463.01.T01 | AT3G46640 | 54.545 | 55 | 24 | 1 | 25 | 79 | 144 | 197 | 3.06e-12 | 65.5 |
| MsG0580025463.01.T01 | AT3G46640 | 54.545 | 55 | 24 | 1 | 25 | 79 | 144 | 197 | 3.06e-12 | 65.5 |
| MsG0580025463.01.T01 | AT5G59570 | 54.545 | 55 | 24 | 1 | 25 | 79 | 141 | 194 | 3.36e-12 | 65.1 |
| MsG0580025463.01.T01 | AT5G59570 | 54.545 | 55 | 24 | 1 | 25 | 79 | 141 | 194 | 3.36e-12 | 65.1 |
| MsG0580025463.01.T01 | AT3G46640 | 54.545 | 55 | 24 | 1 | 25 | 79 | 144 | 197 | 3.52e-12 | 65.1 |
| MsG0580025463.01.T01 | AT2G40970 | 56.364 | 55 | 23 | 1 | 25 | 79 | 105 | 158 | 5.69e-12 | 63.9 |
| MsG0580025463.01.T01 | AT3G16857 | 52.727 | 55 | 25 | 1 | 25 | 79 | 167 | 220 | 1.59e-11 | 63.9 |
| MsG0580025463.01.T01 | AT2G03500 | 54.098 | 61 | 26 | 1 | 25 | 85 | 233 | 291 | 1.61e-11 | 63.5 |
| MsG0580025463.01.T01 | AT3G16857 | 52.727 | 55 | 25 | 1 | 25 | 79 | 237 | 290 | 1.85e-11 | 63.9 |
| MsG0580025463.01.T01 | AT3G16857 | 52.727 | 55 | 25 | 1 | 25 | 79 | 237 | 290 | 1.89e-11 | 63.5 |
| MsG0580025463.01.T01 | AT1G13300 | 50.820 | 61 | 28 | 1 | 25 | 85 | 181 | 239 | 2.70e-11 | 62.8 |
| MsG0580025463.01.T01 | AT2G01760 | 52.727 | 55 | 25 | 1 | 25 | 79 | 135 | 188 | 3.31e-11 | 62.4 |
| MsG0580025463.01.T01 | AT2G01760 | 52.727 | 55 | 25 | 1 | 25 | 79 | 200 | 253 | 6.75e-11 | 61.6 |
| MsG0580025463.01.T01 | AT4G31920 | 40.541 | 74 | 41 | 2 | 25 | 98 | 183 | 253 | 9.08e-11 | 61.6 |
Find 75 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAAGACTTTCTCTTAT+TGG | 0.118942 | 5:-19111219 | MsG0580025463.01.T01:five_prime_UTR |
| CTTGAGCATGATTCTTATTA+TGG | 0.152516 | 5:+19107986 | None:intergenic |
| CTCAGCTTTGTCAAATTTCA+TGG | 0.192891 | 5:-19108058 | MsG0580025463.01.T01:CDS |
| TGCCTTAGTGCTTCTCCTAT+TGG | 0.203121 | 5:+19108643 | None:intergenic |
| ATTAACCTTAGAACAGATTT+AGG | 0.207865 | 5:+19110625 | None:intergenic |
| TAAATCTGTTCTAAGGTTAA+TGG | 0.217308 | 5:-19110623 | MsG0580025463.01.T01:CDS |
| AATTTCAGCAACCATTCTTT+AGG | 0.235538 | 5:-19108919 | MsG0580025463.01.T01:CDS |
| GCCTTAGTGCTTCTCCTATT+GGG | 0.237177 | 5:+19108644 | None:intergenic |
| CTAAGGTTAATGGGATTAAA+AGG | 0.242641 | 5:-19110613 | MsG0580025463.01.T01:CDS |
| GTCCACCTCAGCCTCGGCTT+CGG | 0.273883 | 5:+19111075 | None:intergenic |
| CAGCTAGACTTAAACATTAA+AGG | 0.275731 | 5:-19107890 | MsG0580025463.01.T01:three_prime_UTR |
| ATCAAATATGGTTTCATATA+GGG | 0.282950 | 5:-19107828 | MsG0580025463.01.T01:three_prime_UTR |
| AGAGGCTCAAGGGAAGTATT+TGG | 0.284186 | 5:-19108169 | MsG0580025463.01.T01:CDS |
| TCCACCTCAGCCTCGGCTTC+GGG | 0.297458 | 5:+19111076 | None:intergenic |
| TCATTTGAAGAGCCATTTAC+AGG | 0.303807 | 5:-19110578 | MsG0580025463.01.T01:intron |
| ATTTCAGCAACCATTCTTTA+GGG | 0.314555 | 5:-19108918 | MsG0580025463.01.T01:CDS |
| AAATCTGTTCTAAGGTTAAT+GGG | 0.321195 | 5:-19110622 | MsG0580025463.01.T01:CDS |
| CAACAATAGAGAGAAAATTA+TGG | 0.344224 | 5:+19107704 | None:intergenic |
| AGCTGAAATGGAATCAAATA+TGG | 0.349100 | 5:-19107840 | MsG0580025463.01.T01:three_prime_UTR |
| TTAGGGACTAATACCAACTA+TGG | 0.349561 | 5:-19108901 | MsG0580025463.01.T01:CDS |
| AATCAAATATGGTTTCATAT+AGG | 0.356297 | 5:-19107829 | MsG0580025463.01.T01:three_prime_UTR |
| TACTAGGGACAGAAGAAATA+AGG | 0.361135 | 5:-19107945 | MsG0580025463.01.T01:CDS |
| GGAGGGAGAGGAGGAATTGA+AGG | 0.362824 | 5:-19111132 | MsG0580025463.01.T01:CDS |
| TAGAAGTTGTTACCTGTAAA+TGG | 0.368392 | 5:+19110566 | None:intergenic |
| AATTAAAGTTCAAAAGAGAT+TGG | 0.393386 | 5:-19108617 | MsG0580025463.01.T01:CDS |
| TAATGCATCAAAAGCTCAAC+TGG | 0.394563 | 5:-19108091 | MsG0580025463.01.T01:CDS |
| CGACTCCTAAATCTGTTCTA+AGG | 0.397762 | 5:-19110630 | MsG0580025463.01.T01:CDS |
| GAGAAAGTCTTCAAAGGTAT+AGG | 0.425471 | 5:+19111226 | None:intergenic |
| AAGTAGAATATTCACTTCAA+TGG | 0.434993 | 5:+19107775 | None:intergenic |
| TTCATTATCACCTCCATAGT+TGG | 0.436053 | 5:+19108888 | None:intergenic |
| ATCTGTAGATGGAGCTGAAA+TGG | 0.439210 | 5:-19107852 | MsG0580025463.01.T01:three_prime_UTR |
| TGCTCTGTCCATCTTGAGAA+AGG | 0.439571 | 5:+19108118 | None:intergenic |
| ATGATGGAAAGTGGAGGGAG+AGG | 0.439956 | 5:-19111144 | MsG0580025463.01.T01:CDS |
| TTCAATTATCAAGAAGTACT+AGG | 0.442529 | 5:-19107961 | MsG0580025463.01.T01:CDS |
| CTTTCCATCATACTTCCAAA+TGG | 0.460986 | 5:+19111156 | None:intergenic |
| GGAGGAATTGAAGGGTATGA+TGG | 0.463626 | 5:-19111123 | MsG0580025463.01.T01:CDS |
| GAACTAAAGCCTCAAGTTGA+AGG | 0.464648 | 5:-19107923 | MsG0580025463.01.T01:exon |
| GTCGACGCTGTCACAAAGCT+TGG | 0.467980 | 5:-19111030 | MsG0580025463.01.T01:CDS |
| AAATTATGGAATACATATGT+AGG | 0.478889 | 5:+19107718 | None:intergenic |
| TAAATTGCAAATGAGAATAG+AGG | 0.480939 | 5:-19108187 | MsG0580025463.01.T01:CDS |
| ACCCGAAGCCGAGGCTGAGG+TGG | 0.491348 | 5:-19111077 | MsG0580025463.01.T01:CDS |
| ATTCACAGAGAAATCCCAAT+AGG | 0.498124 | 5:-19108658 | MsG0580025463.01.T01:intron |
| TGGTATTAGTCCCTAAAGAA+TGG | 0.498256 | 5:+19108908 | None:intergenic |
| AATGAACTTGTATCTGTAGA+TGG | 0.501826 | 5:-19107863 | MsG0580025463.01.T01:three_prime_UTR |
| GAGACCCGAAGCCGAGGCTG+AGG | 0.504025 | 5:-19111080 | MsG0580025463.01.T01:CDS |
| ATGGAAAGTGGAGGGAGAGG+AGG | 0.521924 | 5:-19111141 | MsG0580025463.01.T01:CDS |
| AACTATGGAGGTGATAATGA+AGG | 0.530299 | 5:-19108886 | MsG0580025463.01.T01:CDS |
| GATAGTAAAGAAAACATACT+AGG | 0.533466 | 5:-19108021 | MsG0580025463.01.T01:CDS |
| GAGGGAGAGGAGGAATTGAA+GGG | 0.537312 | 5:-19111131 | MsG0580025463.01.T01:CDS |
| AACTAAAGCCTCAAGTTGAA+GGG | 0.540564 | 5:-19107922 | MsG0580025463.01.T01:exon |
| GACGCTGTCACAAAGCTTGG+TGG | 0.544188 | 5:-19111027 | MsG0580025463.01.T01:CDS |
| TTTGGAAGTATGATGGAAAG+TGG | 0.549681 | 5:-19111153 | MsG0580025463.01.T01:exon |
| TCAATTATCAAGAAGTACTA+GGG | 0.553916 | 5:-19107960 | MsG0580025463.01.T01:CDS |
| ACTAAAGCCTCAAGTTGAAG+GGG | 0.554788 | 5:-19107921 | MsG0580025463.01.T01:exon |
| TCCCAATAGGAGAAGCACTA+AGG | 0.559258 | 5:-19108645 | MsG0580025463.01.T01:CDS |
| CAAACAAGCCTTTCTCAAGA+TGG | 0.560229 | 5:-19108126 | MsG0580025463.01.T01:CDS |
| GACAAAGCGGTCATGAAGAT+CGG | 0.565953 | 5:+19111050 | None:intergenic |
| ACTATGGAGGTGATAATGAA+GGG | 0.578144 | 5:-19108885 | MsG0580025463.01.T01:CDS |
| GGCTCAAGGGAAGTATTTGG+AGG | 0.583375 | 5:-19108166 | MsG0580025463.01.T01:CDS |
| TCGGTTGTCCACCTCAGCCT+CGG | 0.594438 | 5:+19111069 | None:intergenic |
| GGAAGTATGATGGAAAGTGG+AGG | 0.597009 | 5:-19111150 | MsG0580025463.01.T01:exon |
| CAATAAGAGAAAGTCTTCAA+AGG | 0.601240 | 5:+19111220 | None:intergenic |
| TGACGAGAGACCCGAAGCCG+AGG | 0.603102 | 5:-19111086 | MsG0580025463.01.T01:CDS |
| GAAGTATGATGGAAAGTGGA+GGG | 0.607603 | 5:-19111149 | MsG0580025463.01.T01:exon |
| AAATGAGAATAGAGGCTCAA+GGG | 0.615268 | 5:-19108179 | MsG0580025463.01.T01:CDS |
| CAAATGAGAATAGAGGCTCA+AGG | 0.629250 | 5:-19108180 | MsG0580025463.01.T01:CDS |
| AGAAGAGGTACATACTGTCA+GGG | 0.640171 | 5:+19111004 | None:intergenic |
| CTATGGAGGTGATAATGAAG+GGG | 0.661113 | 5:-19108884 | MsG0580025463.01.T01:CDS |
| GGGACTAATACCAACTATGG+AGG | 0.669862 | 5:-19108898 | MsG0580025463.01.T01:CDS |
| CTAGACTTAAACATTAAAGG+TGG | 0.670077 | 5:-19107887 | MsG0580025463.01.T01:three_prime_UTR |
| ATGGAGGTGATAATGAAGGG+GGG | 0.671828 | 5:-19108882 | MsG0580025463.01.T01:intron |
| TATGGAGGTGATAATGAAGG+GGG | 0.676383 | 5:-19108883 | MsG0580025463.01.T01:CDS |
| GAGATTGGAAGAACAACTTG+AGG | 0.683401 | 5:-19108602 | MsG0580025463.01.T01:intron |
| TTGTGACAGCGTCGACAAAG+CGG | 0.689498 | 5:+19111037 | None:intergenic |
| CTAAAGCCTCAAGTTGAAGG+GGG | 0.707595 | 5:-19107920 | MsG0580025463.01.T01:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATCTCTTATTATAATTA+TGG | + | Chr5:19108967-19108986 | None:intergenic | 10.0% |
| !!! | AAAATTATTTCTATTACATT+TGG | - | Chr5:19109947-19109966 | MsG0580025463.01.T01:intron | 10.0% |
| !!! | ATTTTATTTTTTGACTAAAA+AGG | + | Chr5:19108395-19108414 | None:intergenic | 10.0% |
| !!! | TAAAAATAGGTTTTTTTTTT+TGG | - | Chr5:19108491-19108510 | MsG0580025463.01.T01:intron | 10.0% |
| !!! | TCTAAATATTTTCTTATTAA+TGG | - | Chr5:19108191-19108210 | MsG0580025463.01.T01:CDS | 10.0% |
| !! | AATTAAAATGCTAATTACAT+AGG | + | Chr5:19110209-19110228 | None:intergenic | 15.0% |
| !! | ATAAACTAGTAGTTAAAAAT+AGG | - | Chr5:19108478-19108497 | MsG0580025463.01.T01:intron | 15.0% |
| !! | ATGATATATTTACTTTATGA+AGG | - | Chr5:19108454-19108473 | MsG0580025463.01.T01:intron | 15.0% |
| !! | TATTATTATTAATTAGAGCA+TGG | - | Chr5:19108517-19108536 | MsG0580025463.01.T01:intron | 15.0% |
| !!! | AAAGATTTGCTAAAAAAAAT+AGG | - | Chr5:19108985-19109004 | MsG0580025463.01.T01:intron | 15.0% |
| !!! | ATTTTTTATCAAAGAATTCA+AGG | + | Chr5:19109298-19109317 | None:intergenic | 15.0% |
| !!! | CAAACACAAATTTTAAATAA+AGG | + | Chr5:19108064-19108083 | None:intergenic | 15.0% |
| !!! | GTAATTAGCATTTTAATTTT+AGG | - | Chr5:19110211-19110230 | MsG0580025463.01.T01:intron | 15.0% |
| !!! | GTTAATTGTCATTTAAATTA+TGG | + | Chr5:19108945-19108964 | None:intergenic | 15.0% |
| !! | AAATATTAATGATCATGACT+AGG | - | Chr5:19108625-19108644 | MsG0580025463.01.T01:CDS | 20.0% |
| !! | AAATTATGGAATACATATGT+AGG | + | Chr5:19111217-19111236 | None:intergenic | 20.0% |
| !! | AACTTGAACTTTATATAGTT+CGG | - | Chr5:19108778-19108797 | MsG0580025463.01.T01:intron | 20.0% |
| !! | AATATTAATGATCATGACTA+GGG | - | Chr5:19108626-19108645 | MsG0580025463.01.T01:CDS | 20.0% |
| !! | AATCAAATATGGTTTCATAT+AGG | - | Chr5:19111103-19111122 | MsG0580025463.01.T01:CDS | 20.0% |
| !! | AATTAAAGTTCAAAAGAGAT+TGG | - | Chr5:19110315-19110334 | MsG0580025463.01.T01:intron | 20.0% |
| !! | AGCATATGATAATTCAAAAA+TGG | + | Chr5:19111134-19111153 | None:intergenic | 20.0% |
| !! | ATCAAATATGGTTTCATATA+GGG | - | Chr5:19111104-19111123 | MsG0580025463.01.T01:CDS | 20.0% |
| !! | TATATCATCACTATGTAAAA+AGG | + | Chr5:19108442-19108461 | None:intergenic | 20.0% |
| !! | TCTGCAAAATTAATAGAAAA+TGG | + | Chr5:19109720-19109739 | None:intergenic | 20.0% |
| !!! | AGAAATTTTAGATGAGAATT+TGG | + | Chr5:19110184-19110203 | None:intergenic | 20.0% |
| !!! | ATTCATTTGAATTTTCCATT+TGG | - | Chr5:19107761-19107780 | MsG0580025463.01.T01:three_prime_UTR | 20.0% |
| !!! | TTATTTTTTGACTAAAAAGG+TGG | + | Chr5:19108392-19108411 | None:intergenic | 20.0% |
| !!! | TTTTGTCTTTTCATCTTTTT+AGG | - | Chr5:19109977-19109996 | MsG0580025463.01.T01:intron | 20.0% |
| ! | AAGTAGAATATTCACTTCAA+TGG | + | Chr5:19111160-19111179 | None:intergenic | 25.0% |
| ! | ATAGTTTAACAATGTTGACA+AGG | - | Chr5:19109040-19109059 | MsG0580025463.01.T01:intron | 25.0% |
| ! | ATGTAAAAAGGCAAAAGAAA+AGG | + | Chr5:19108430-19108449 | None:intergenic | 25.0% |
| ! | ATTAACCTTAGAACAGATTT+AGG | + | Chr5:19108310-19108329 | None:intergenic | 25.0% |
| ! | CAACAATAGAGAGAAAATTA+TGG | + | Chr5:19111231-19111250 | None:intergenic | 25.0% |
| ! | CTATATATACCAATTCTTTG+AGG | + | Chr5:19109683-19109702 | None:intergenic | 25.0% |
| ! | CTCAAAGAATTGGTATATAT+AGG | - | Chr5:19109681-19109700 | MsG0580025463.01.T01:intron | 25.0% |
| ! | GATAGTAAAGAAAACATACT+AGG | - | Chr5:19110911-19110930 | MsG0580025463.01.T01:intron | 25.0% |
| ! | GTTAACTCAATTAAACAAGT+AGG | - | Chr5:19108859-19108878 | MsG0580025463.01.T01:intron | 25.0% |
| ! | TAAATTGCAAATGAGAATAG+AGG | - | Chr5:19110745-19110764 | MsG0580025463.01.T01:intron | 25.0% |
| ! | TAAGGATATATATACTCCTT+AGG | + | Chr5:19110672-19110691 | None:intergenic | 25.0% |
| ! | TGATTAGAAAGTCATGATTA+GGG | + | Chr5:19109504-19109523 | None:intergenic | 25.0% |
| ! | TTAGTTTAACAACAATAGAG+AGG | - | Chr5:19109121-19109140 | MsG0580025463.01.T01:intron | 25.0% |
| ! | TTCTCAATTGTCAATTACAT+AGG | + | Chr5:19110442-19110461 | None:intergenic | 25.0% |
| ! | TTCTCTCCAAAAAAAATGTA+GGG | + | Chr5:19111184-19111203 | None:intergenic | 25.0% |
| ! | TTGATTAGAAAGTCATGATT+AGG | + | Chr5:19109505-19109524 | None:intergenic | 25.0% |
| ! | TTTATCAAAGAATTCAAGGA+CGG | + | Chr5:19109294-19109313 | None:intergenic | 25.0% |
| ! | TTTCTCTCCAAAAAAAATGT+AGG | + | Chr5:19111185-19111204 | None:intergenic | 25.0% |
| !! | ACATTCAAGTTAACTTGAAA+GGG | - | Chr5:19108088-19108107 | MsG0580025463.01.T01:CDS | 25.0% |
| !! | ATTTGGCTCATGAAAAATAT+AGG | + | Chr5:19110130-19110149 | None:intergenic | 25.0% |
| !! | CATAATTTTCTCTCTATTGT+TGG | - | Chr5:19111229-19111248 | MsG0580025463.01.T01:five_prime_UTR | 25.0% |
| !!! | AAATCTGTTCTAAGGTTAAT+GGG | - | Chr5:19108310-19108329 | MsG0580025463.01.T01:intron | 25.0% |
| !!! | TAAATCTGTTCTAAGGTTAA+TGG | - | Chr5:19108309-19108328 | MsG0580025463.01.T01:intron | 25.0% |
| !!! | TACTTTCCCTACATTTTTTT+TGG | - | Chr5:19111175-19111194 | MsG0580025463.01.T01:five_prime_UTR | 25.0% |
| !!! | TCAATTATCAAGAAGTACTA+GGG | - | Chr5:19110972-19110991 | MsG0580025463.01.T01:intron | 25.0% |
| !!! | TTCAATTATCAAGAAGTACT+AGG | - | Chr5:19110971-19110990 | MsG0580025463.01.T01:intron | 25.0% |
| !!! | TTTAGGTTTTTCTATGTCTT+TGG | + | Chr5:19108014-19108033 | None:intergenic | 25.0% |
| !!! | TTTTGAAAGAGATGAGAATT+TGG | + | Chr5:19110147-19110166 | None:intergenic | 25.0% |
| AAGACCACTAATGATGAAAA+TGG | + | Chr5:19109238-19109257 | None:intergenic | 30.0% | |
| AAGTGTCTCAAATAAGTGAA+GGG | - | Chr5:19109822-19109841 | MsG0580025463.01.T01:intron | 30.0% | |
| AATGAACTTGTATCTGTAGA+TGG | - | Chr5:19111069-19111088 | MsG0580025463.01.T01:CDS | 30.0% | |
| AATTCAGAGAAGCTATACAT+TGG | - | Chr5:19109569-19109588 | MsG0580025463.01.T01:intron | 30.0% | |
| AATTTCAGCAACCATTCTTT+AGG | - | Chr5:19110013-19110032 | MsG0580025463.01.T01:intron | 30.0% | |
| ACAAAACTAGATGAAAGAAG+AGG | + | Chr5:19107946-19107965 | None:intergenic | 30.0% | |
| AGCTGAAATGGAATCAAATA+TGG | - | Chr5:19111092-19111111 | MsG0580025463.01.T01:CDS | 30.0% | |
| ATTTCAGCAACCATTCTTTA+GGG | - | Chr5:19110014-19110033 | MsG0580025463.01.T01:intron | 30.0% | |
| CAACTCAACTCAATAAGAAT+TGG | + | Chr5:19109443-19109462 | None:intergenic | 30.0% | |
| CAATAAGAGAAAGTCTTCAA+AGG | + | Chr5:19107715-19107734 | None:intergenic | 30.0% | |
| CAATTGGACTGTTTAATTCT+AGG | - | Chr5:19110715-19110734 | MsG0580025463.01.T01:intron | 30.0% | |
| CAGCTAGACTTAAACATTAA+AGG | - | Chr5:19111042-19111061 | MsG0580025463.01.T01:CDS | 30.0% | |
| CATCTCTATGTGTAACATAT+TGG | - | Chr5:19109165-19109184 | MsG0580025463.01.T01:CDS | 30.0% | |
| CTAAGGTTAATGGGATTAAA+AGG | - | Chr5:19108319-19108338 | MsG0580025463.01.T01:intron | 30.0% | |
| CTAGAATTAAACAGTCCAAT+TGG | + | Chr5:19110717-19110736 | None:intergenic | 30.0% | |
| CTAGACTTAAACATTAAAGG+TGG | - | Chr5:19111045-19111064 | MsG0580025463.01.T01:CDS | 30.0% | |
| CTAGTGAATTTCTAACCAAT+TGG | - | Chr5:19110699-19110718 | MsG0580025463.01.T01:intron | 30.0% | |
| CTTGAGCATGATTCTTATTA+TGG | + | Chr5:19110949-19110968 | None:intergenic | 30.0% | |
| GAATCATAAGCTTTCACAAT+TGG | + | Chr5:19108173-19108192 | None:intergenic | 30.0% | |
| GAATTGTCGTTAAACTAGTT+AGG | + | Chr5:19110258-19110277 | None:intergenic | 30.0% | |
| GAGGAGAAAACAACATTATT+AGG | + | Chr5:19109664-19109683 | None:intergenic | 30.0% | |
| GATAAAGTATGTACATGTTG+TGG | - | Chr5:19108594-19108613 | MsG0580025463.01.T01:intron | 30.0% | |
| GGTTAGAAATTCACTAGTTA+GGG | + | Chr5:19110696-19110715 | None:intergenic | 30.0% | |
| GTCTTATAATAAGAGACCTA+AGG | - | Chr5:19110653-19110672 | MsG0580025463.01.T01:intron | 30.0% | |
| GTTGTTAAACTAAACGATGT+GGG | + | Chr5:19109114-19109133 | None:intergenic | 30.0% | |
| TAGAAGTTGTTACCTGTAAA+TGG | + | Chr5:19108369-19108388 | None:intergenic | 30.0% | |
| TCAATTAAACAAGTAGGAAG+AGG | - | Chr5:19108865-19108884 | MsG0580025463.01.T01:intron | 30.0% | |
| TCATCATTAGTGTCATAGAT+TGG | - | Chr5:19109627-19109646 | MsG0580025463.01.T01:intron | 30.0% | |
| TGGTTAGAAATTCACTAGTT+AGG | + | Chr5:19110697-19110716 | None:intergenic | 30.0% | |
| TGGTTAGATTTGACATTGAA+AGG | - | Chr5:19108121-19108140 | MsG0580025463.01.T01:CDS | 30.0% | |
| TGTTGTTAAACTAAACGATG+TGG | + | Chr5:19109115-19109134 | None:intergenic | 30.0% | |
| TTTATAGTTCACGAACAACT+CGG | + | Chr5:19109359-19109378 | None:intergenic | 30.0% | |
| ! | AAAGTGTCTCAAATAAGTGA+AGG | - | Chr5:19109821-19109840 | MsG0580025463.01.T01:intron | 30.0% |
| ! | ATGATGATGTAATGAACTTC+TGG | + | Chr5:19109614-19109633 | None:intergenic | 30.0% |
| ! | CACATTCAAGTTAACTTGAA+AGG | - | Chr5:19108087-19108106 | MsG0580025463.01.T01:CDS | 30.0% |
| ! | CTTTGAAGACTTTCTCTTAT+TGG | - | Chr5:19107713-19107732 | MsG0580025463.01.T01:three_prime_UTR | 30.0% |
| ! | GACTCACATACTAATTTTAG+TGG | + | Chr5:19110636-19110655 | None:intergenic | 30.0% |
| ! | TTGTTTTCTCCTCAAAGAAT+TGG | - | Chr5:19109671-19109690 | MsG0580025463.01.T01:intron | 30.0% |
| !! | ATTTTGCAGAAGTATAGACT+TGG | - | Chr5:19109730-19109749 | MsG0580025463.01.T01:intron | 30.0% |
| !! | TTGTTTGCTTTTGTGTTTAG+AGG | - | Chr5:19108279-19108298 | MsG0580025463.01.T01:intron | 30.0% |
| !! | TTTTCCATTTGGAAGTATGA+TGG | - | Chr5:19107772-19107791 | MsG0580025463.01.T01:three_prime_UTR | 30.0% |
| !!! | CTTGAAAGGGAAGTTTTTTT+TGG | - | Chr5:19108101-19108120 | MsG0580025463.01.T01:CDS | 30.0% |
| !!! | TTGTAGTTGTAGTTTTGTTG+CGG | - | Chr5:19107979-19107998 | MsG0580025463.01.T01:CDS | 30.0% |
| AAATGAGAATAGAGGCTCAA+GGG | - | Chr5:19110753-19110772 | MsG0580025463.01.T01:intron | 35.0% | |
| AAATTCACTAGTTAGGGCTA+AGG | + | Chr5:19110690-19110709 | None:intergenic | 35.0% | |
| AACAAGTAGGAAGAGGAATA+AGG | - | Chr5:19108872-19108891 | MsG0580025463.01.T01:intron | 35.0% | |
| ACCACTAATGATGAAAATGG+TGG | + | Chr5:19109235-19109254 | None:intergenic | 35.0% | |
| AGAGCATGGTACACTTTAAA+GGG | - | Chr5:19108531-19108550 | MsG0580025463.01.T01:intron | 35.0% | |
| ATTCACAGAGAAATCCCAAT+AGG | - | Chr5:19110274-19110293 | MsG0580025463.01.T01:intron | 35.0% | |
| CTTTCCATCATACTTCCAAA+TGG | + | Chr5:19107779-19107798 | None:intergenic | 35.0% | |
| GACAATTAACTCGTTGAACT+TGG | - | Chr5:19108695-19108714 | MsG0580025463.01.T01:intron | 35.0% | |
| GTATGTACATGTTGTGGAAT+TGG | - | Chr5:19108600-19108619 | MsG0580025463.01.T01:intron | 35.0% | |
| GTTTAACAACAATAGAGAGG+AGG | - | Chr5:19109124-19109143 | MsG0580025463.01.T01:intron | 35.0% | |
| TAATGCATCAAAAGCTCAAC+TGG | - | Chr5:19110841-19110860 | MsG0580025463.01.T01:intron | 35.0% | |
| TACTAGGGACAGAAGAAATA+AGG | - | Chr5:19110987-19111006 | MsG0580025463.01.T01:intron | 35.0% | |
| TAGAGCATGGTACACTTTAA+AGG | - | Chr5:19108530-19108549 | MsG0580025463.01.T01:intron | 35.0% | |
| TATAGCTTCTCTGAATTGAG+AGG | + | Chr5:19109566-19109585 | None:intergenic | 35.0% | |
| TCATTTGAAGAGCCATTTAC+AGG | - | Chr5:19108354-19108373 | MsG0580025463.01.T01:intron | 35.0% | |
| TCGAACTCGAGCTTAAAAAA+AGG | - | Chr5:19109383-19109402 | MsG0580025463.01.T01:intron | 35.0% | |
| TCTAGAAGAGTCCTATTGTA+TGG | + | Chr5:19110555-19110574 | None:intergenic | 35.0% | |
| TGGTATTAGTCCCTAAAGAA+TGG | + | Chr5:19110027-19110046 | None:intergenic | 35.0% | |
| TTAGGGACTAATACCAACTA+TGG | - | Chr5:19110031-19110050 | MsG0580025463.01.T01:intron | 35.0% | |
| TTCATTATCACCTCCATAGT+TGG | + | Chr5:19110047-19110066 | None:intergenic | 35.0% | |
| ! | AACTATGGAGGTGATAATGA+AGG | - | Chr5:19110046-19110065 | MsG0580025463.01.T01:intron | 35.0% |
| ! | ACCACCATTTTCATCATTAG+TGG | - | Chr5:19109231-19109250 | MsG0580025463.01.T01:intron | 35.0% |
| ! | ACTATGGAGGTGATAATGAA+GGG | - | Chr5:19110047-19110066 | MsG0580025463.01.T01:intron | 35.0% |
| ! | AGGAAGTATGATGGAGAATT+TGG | - | Chr5:19108141-19108160 | MsG0580025463.01.T01:CDS | 35.0% |
| ! | CTCAGCTTTGTCAAATTTCA+TGG | - | Chr5:19110874-19110893 | MsG0580025463.01.T01:intron | 35.0% |
| ! | GACATTGAAAGGAAGTATGA+TGG | - | Chr5:19108132-19108151 | MsG0580025463.01.T01:CDS | 35.0% |
| ! | GAGAAAGTCTTCAAAGGTAT+AGG | + | Chr5:19107709-19107728 | None:intergenic | 35.0% |
| ! | GGAAGTATGATGGAGAATTT+GGG | - | Chr5:19108142-19108161 | MsG0580025463.01.T01:CDS | 35.0% |
| ! | TTTATATAGTTCGGCTCGTT+TGG | - | Chr5:19108787-19108806 | MsG0580025463.01.T01:intron | 35.0% |
| ! | TTTGGAAGTATGATGGAAAG+TGG | - | Chr5:19107779-19107798 | MsG0580025463.01.T01:three_prime_UTR | 35.0% |
| !! | AACTAAAGCCTCAAGTTGAA+GGG | - | Chr5:19111010-19111029 | MsG0580025463.01.T01:intron | 35.0% |
| ATCTGTAGATGGAGCTGAAA+TGG | - | Chr5:19111080-19111099 | MsG0580025463.01.T01:CDS | 40.0% | |
| CAAACAAGCCTTTCTCAAGA+TGG | - | Chr5:19110806-19110825 | MsG0580025463.01.T01:intron | 40.0% | |
| CAAATGAGAATAGAGGCTCA+AGG | - | Chr5:19110752-19110771 | MsG0580025463.01.T01:intron | 40.0% | |
| CGAACTAGAGCGCAATATTT+AGG | + | Chr5:19108031-19108050 | None:intergenic | 40.0% | |
| CGACTCCTAAATCTGTTCTA+AGG | - | Chr5:19108302-19108321 | MsG0580025463.01.T01:intron | 40.0% | |
| GAGATTGGAAGAACAACTTG+AGG | - | Chr5:19110330-19110349 | MsG0580025463.01.T01:intron | 40.0% | |
| GAGCCAACTCGAATATAGTT+CGG | - | Chr5:19108662-19108681 | MsG0580025463.01.T01:intron | 40.0% | |
| GGCTTGATTGATGTATGTAG+TGG | - | Chr5:19108212-19108231 | MsG0580025463.01.T01:intron | 40.0% | |
| GTTCCGAACTATATTCGAGT+TGG | + | Chr5:19108668-19108687 | None:intergenic | 40.0% | |
| TAGAAAGTCATGATTAGGGC+TGG | + | Chr5:19109500-19109519 | None:intergenic | 40.0% | |
| TAGCTCAAGTTCAGCTCATT+TGG | + | Chr5:19108729-19108748 | None:intergenic | 40.0% | |
| TAGTGGTCTTTAACTCTAGC+AGG | - | Chr5:19109248-19109267 | MsG0580025463.01.T01:intron | 40.0% | |
| TGCCTATAATGTATCATGCC+CGG | - | Chr5:19110508-19110527 | MsG0580025463.01.T01:intron | 40.0% | |
| TTAATGATCATGACTAGGGC+TGG | - | Chr5:19108630-19108649 | MsG0580025463.01.T01:CDS | 40.0% | |
| ! | AAGAAGAGGTACATACTGTC+AGG | + | Chr5:19107932-19107951 | None:intergenic | 40.0% |
| ! | AATTGGTTCAGCTCGAAACT+CGG | + | Chr5:19109426-19109445 | None:intergenic | 40.0% |
| ! | AGAAGAGGTACATACTGTCA+GGG | + | Chr5:19107931-19107950 | None:intergenic | 40.0% |
| ! | CTATGGAGGTGATAATGAAG+GGG | - | Chr5:19110048-19110067 | MsG0580025463.01.T01:intron | 40.0% |
| ! | GAAGTATGATGGAAAGTGGA+GGG | - | Chr5:19107783-19107802 | MsG0580025463.01.T01:three_prime_UTR | 40.0% |
| ! | TAGCAGGACGGTTAATCTTT+TGG | - | Chr5:19109264-19109283 | MsG0580025463.01.T01:intron | 40.0% |
| ! | TATGGAGGTGATAATGAAGG+GGG | - | Chr5:19110049-19110068 | MsG0580025463.01.T01:intron | 40.0% |
| !! | ACTAAAGCCTCAAGTTGAAG+GGG | - | Chr5:19111011-19111030 | MsG0580025463.01.T01:intron | 40.0% |
| !! | GAACTAAAGCCTCAAGTTGA+AGG | - | Chr5:19111009-19111028 | MsG0580025463.01.T01:intron | 40.0% |
| !! | GAACTATATTCGAGTTGGCT+CGG | + | Chr5:19108663-19108682 | None:intergenic | 40.0% |
| AGTCCTATTGTATGGTGCGA+AGG | + | Chr5:19110547-19110566 | None:intergenic | 45.0% | |
| AGTTCACGAACAACTCGGTT+CGG | + | Chr5:19109354-19109373 | None:intergenic | 45.0% | |
| GACAAAGCGGTCATGAAGAT+CGG | + | Chr5:19107885-19107904 | None:intergenic | 45.0% | |
| GACCGGGCATGATACATTAT+AGG | + | Chr5:19110513-19110532 | None:intergenic | 45.0% | |
| GCCTTAGTGCTTCTCCTATT+GGG | + | Chr5:19110291-19110310 | None:intergenic | 45.0% | |
| GCTCATTAGGTTCATCTCGT+GGG | + | Chr5:19109332-19109351 | None:intergenic | 45.0% | |
| GGGACTAATACCAACTATGG+AGG | - | Chr5:19110034-19110053 | MsG0580025463.01.T01:intron | 45.0% | |
| GGTCTTTAACTCTAGCAGGA+CGG | - | Chr5:19109252-19109271 | MsG0580025463.01.T01:intron | 45.0% | |
| TGCCTTAGTGCTTCTCCTAT+TGG | + | Chr5:19110292-19110311 | None:intergenic | 45.0% | |
| TGCTCTGTCCATCTTGAGAA+AGG | + | Chr5:19110817-19110836 | None:intergenic | 45.0% | |
| TGTCCTTCGCACCATACAAT+AGG | - | Chr5:19110541-19110560 | MsG0580025463.01.T01:intron | 45.0% | |
| ! | ATGGAGGTGATAATGAAGGG+GGG | - | Chr5:19110050-19110069 | MsG0580025463.01.T01:intron | 45.0% |
| ! | GGAAGTATGATGGAAAGTGG+AGG | - | Chr5:19107782-19107801 | MsG0580025463.01.T01:three_prime_UTR | 45.0% |
| ! | GGAGGAATTGAAGGGTATGA+TGG | - | Chr5:19107809-19107828 | MsG0580025463.01.T01:three_prime_UTR | 45.0% |
| !! | AGAGGCTCAAGGGAAGTATT+TGG | - | Chr5:19110763-19110782 | MsG0580025463.01.T01:intron | 45.0% |
| !! | CTAAAGCCTCAAGTTGAAGG+GGG | - | Chr5:19111012-19111031 | MsG0580025463.01.T01:intron | 45.0% |
| !! | TCCCAATAGGAGAAGCACTA+AGG | - | Chr5:19110287-19110306 | MsG0580025463.01.T01:intron | 45.0% |
| ATTGCACCCCCTTCAACTTG+AGG | + | Chr5:19111021-19111040 | None:intergenic | 50.0% | |
| GAGGGAGAGGAGGAATTGAA+GGG | - | Chr5:19107801-19107820 | MsG0580025463.01.T01:three_prime_UTR | 50.0% | |
| GGCTCATTAGGTTCATCTCG+TGG | + | Chr5:19109333-19109352 | None:intergenic | 50.0% | |
| ! | ATGATGGAAAGTGGAGGGAG+AGG | - | Chr5:19107788-19107807 | MsG0580025463.01.T01:three_prime_UTR | 50.0% |
| !! | ACAACTCGGTTCGGCTCATT+AGG | + | Chr5:19109345-19109364 | None:intergenic | 50.0% |
| !! | GGCTCAAGGGAAGTATTTGG+AGG | - | Chr5:19110766-19110785 | MsG0580025463.01.T01:intron | 50.0% |
| !! | TTGTGACAGCGTCGACAAAG+CGG | + | Chr5:19107898-19107917 | None:intergenic | 50.0% |
| ATGGAAAGTGGAGGGAGAGG+AGG | - | Chr5:19107791-19107810 | MsG0580025463.01.T01:three_prime_UTR | 55.0% | |
| CGAAGGACACAACGAACGAC+CGG | + | Chr5:19110530-19110549 | None:intergenic | 55.0% | |
| GAAGGACACAACGAACGACC+GGG | + | Chr5:19110529-19110548 | None:intergenic | 55.0% | |
| GACGCTGTCACAAAGCTTGG+TGG | - | Chr5:19107905-19107924 | MsG0580025463.01.T01:three_prime_UTR | 55.0% | |
| GGAGGGAGAGGAGGAATTGA+AGG | - | Chr5:19107800-19107819 | MsG0580025463.01.T01:three_prime_UTR | 55.0% | |
| GTCGACGCTGTCACAAAGCT+TGG | - | Chr5:19107902-19107921 | MsG0580025463.01.T01:three_prime_UTR | 55.0% | |
| ! | CAGACGAGTTCGACTCGACT+CGG | - | Chr5:19109467-19109486 | MsG0580025463.01.T01:intron | 55.0% |
| TCGGTTGTCCACCTCAGCCT+CGG | + | Chr5:19107866-19107885 | None:intergenic | 60.0% | |
| GTCCACCTCAGCCTCGGCTT+CGG | + | Chr5:19107860-19107879 | None:intergenic | 65.0% | |
| TCCACCTCAGCCTCGGCTTC+GGG | + | Chr5:19107859-19107878 | None:intergenic | 65.0% | |
| TGACGAGAGACCCGAAGCCG+AGG | - | Chr5:19107846-19107865 | MsG0580025463.01.T01:three_prime_UTR | 65.0% | |
| ACCCGAAGCCGAGGCTGAGG+TGG | - | Chr5:19107855-19107874 | MsG0580025463.01.T01:three_prime_UTR | 70.0% | |
| GAGACCCGAAGCCGAGGCTG+AGG | - | Chr5:19107852-19107871 | MsG0580025463.01.T01:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 19107701 | 19111253 | 19107701 | ID=MsG0580025463.01;Name=MsG0580025463.01 |
| Chr5 | mRNA | 19107701 | 19111253 | 19107701 | ID=MsG0580025463.01.T01;Parent=MsG0580025463.01;Name=MsG0580025463.01.T01;_AED=0.50;_eAED=0.50;_QI=87|1|1|1|0.6|0.66|6|238|235 |
| Chr5 | exon | 19107701 | 19108217 | 19107701 | ID=MsG0580025463.01.T01:exon:29722;Parent=MsG0580025463.01.T01 |
| Chr5 | exon | 19108603 | 19108672 | 19108603 | ID=MsG0580025463.01.T01:exon:29721;Parent=MsG0580025463.01.T01 |
| Chr5 | exon | 19108883 | 19108955 | 19108883 | ID=MsG0580025463.01.T01:exon:29720;Parent=MsG0580025463.01.T01 |
| Chr5 | exon | 19109155 | 19109215 | 19109155 | ID=MsG0580025463.01.T01:exon:29719;Parent=MsG0580025463.01.T01 |
| Chr5 | exon | 19110579 | 19110655 | 19110579 | ID=MsG0580025463.01.T01:exon:29718;Parent=MsG0580025463.01.T01 |
| Chr5 | exon | 19111019 | 19111253 | 19111019 | ID=MsG0580025463.01.T01:exon:29717;Parent=MsG0580025463.01.T01 |
| Chr5 | five_prime_UTR | 19111167 | 19111253 | 19111167 | ID=MsG0580025463.01.T01:five_prime_utr;Parent=MsG0580025463.01.T01 |
| Chr5 | CDS | 19111019 | 19111166 | 19111019 | ID=MsG0580025463.01.T01:cds;Parent=MsG0580025463.01.T01 |
| Chr5 | CDS | 19110579 | 19110655 | 19110579 | ID=MsG0580025463.01.T01:cds;Parent=MsG0580025463.01.T01 |
| Chr5 | CDS | 19109155 | 19109215 | 19109155 | ID=MsG0580025463.01.T01:cds;Parent=MsG0580025463.01.T01 |
| Chr5 | CDS | 19108883 | 19108955 | 19108883 | ID=MsG0580025463.01.T01:cds;Parent=MsG0580025463.01.T01 |
| Chr5 | CDS | 19108603 | 19108672 | 19108603 | ID=MsG0580025463.01.T01:cds;Parent=MsG0580025463.01.T01 |
| Chr5 | CDS | 19107939 | 19108217 | 19107939 | ID=MsG0580025463.01.T01:cds;Parent=MsG0580025463.01.T01 |
| Chr5 | three_prime_UTR | 19107701 | 19107938 | 19107701 | ID=MsG0580025463.01.T01:three_prime_utr;Parent=MsG0580025463.01.T01 |
| Gene Sequence |
| Protein sequence |
