AlfalfaGEDB | MsG0080048633.01

M. sativa cultivar ZhongmuNo.1 / MsG0080048633.01

KEGG: -
GO: GO:0006952 GO:0009607
PFAM: PF00407

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048633.01.T01	XP_003628200.1	92.308	156	12	0	1	156	1	156	1.36E-101	298

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048633.01.T01	Q9SSK5	37.584	149	90	3	3	149	7	154	2.74E-25	97.8

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048633.01.T01	G7L7T5	92.308	156	12	0	1	156	1	156	6.52e-102	298

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048633.01	MsG0080048652.01	0.929884	3.659235e-93	2.094685e-88
MsG0080048633.01	MsG0080048694.01	-0.839455	1.568235e-57	2.166872e-54
MsG0080048633.01	MsG0080048695.01	-0.839633	1.409608e-57	1.958300e-54
MsG0080048633.01	MsG0080048889.01	0.814540	1.462296e-51	9.839188e-49
MsG0080048633.01	MsG0080048948.01	-0.824255	8.914413e-54	7.854253e-51
MsG0080048633.01	MsG0080049023.01	-0.802270	6.075747e-49	2.963493e-46
MsG0080048633.01	MsG0180000367.01	0.803504	3.377307e-49	1.700121e-46
MsG0080048633.01	MsG0180001079.01	0.835012	2.149159e-56	2.594691e-53
MsG0080048633.01	MsG0180001147.01	-0.802457	5.560048e-49	2.724917e-46
MsG0080048633.01	MsG0180001234.01	0.832059	1.173024e-55	1.296559e-52
MsG0080048633.01	MsG0180001925.01	-0.803273	3.772114e-49	1.887497e-46
MsG0080048633.01	MsG0180002808.01	0.851656	7.699179e-61	1.569224e-57
MsG0080048633.01	MsG0180003375.01	0.807054	6.095224e-50	3.361260e-47
MsG0080048633.01	MsG0180003482.01	0.824236	9.003923e-54	7.929295e-51
MsG0080048633.01	MsG0180003483.01	0.825710	4.041281e-54	3.712231e-51
MsG0080048633.01	MsG0180003484.01	0.806231	9.093147e-50	4.909897e-47
MsG0080048633.01	MsG0180004124.01	-0.855354	6.675624e-62	1.537157e-58
MsG0080048633.01	MsG0180004125.01	-0.852030	6.030041e-61	1.243712e-57
MsG0080048633.01	MsG0180004559.01	0.834385	3.089696e-56	3.660913e-53
MsG0080048633.01	MsG0180004688.01	0.826174	3.135027e-54	2.918140e-51
MsG0080048633.01	MsG0180005353.01	0.801653	8.134318e-49	3.905717e-46
MsG0080048633.01	MsG0180005369.01	-0.826000	3.449079e-54	3.194600e-51
MsG0080048633.01	MsG0180005757.01	0.815675	8.187163e-52	5.681662e-49
MsG0080048633.01	MsG0180006191.01	0.829465	5.069658e-55	5.192746e-52
MsG0080048633.01	MsG0280006316.01	0.816387	5.675809e-52	4.016207e-49
MsG0080048633.01	MsG0280006381.01	-0.807497	4.910586e-50	2.739418e-47
MsG0080048633.01	MsG0280006485.01	0.833060	6.622424e-56	7.541482e-53
MsG0080048633.01	MsG0280007288.01	-0.804744	1.865260e-49	9.694270e-47
MsG0080048633.01	MsG0280007291.01	-0.813363	2.659029e-51	1.732977e-48
MsG0080048633.01	MsG0280007653.01	-0.816562	5.187573e-52	3.688291e-49
MsG0080048633.01	MsG0280007786.01	0.832564	8.798551e-56	9.871386e-53
MsG0080048633.01	MsG0280008226.01	0.820990	5.122521e-53	4.116266e-50
MsG0080048633.01	MsG0280008407.01	0.857821	1.256857e-62	3.142085e-59
MsG0080048633.01	MsG0280008495.01	0.849062	4.114609e-60	7.706468e-57
MsG0080048633.01	MsG0280008553.01	0.815323	9.803373e-52	6.737727e-49
MsG0080048633.01	MsG0280008659.01	0.816063	6.709288e-52	4.705704e-49
MsG0080048633.01	MsG0280009742.01	-0.814933	1.197038e-51	8.139584e-49
MsG0080048633.01	MsG0280009864.01	-0.803243	3.825893e-49	1.912966e-46
MsG0080048633.01	MsG0280010142.01	-0.836239	1.051705e-56	1.317667e-53
MsG0080048633.01	MsG0280010296.01	0.806122	9.589343e-50	5.163177e-47
MsG0080048633.01	MsG0280010303.01	0.854661	1.061200e-61	2.387522e-58
MsG0080048633.01	MsG0280010617.01	0.832897	7.271379e-56	8.239341e-53
MsG0080048633.01	MsG0280011267.01	0.800749	1.245705e-48	5.846102e-46
MsG0080048633.01	MsG0280011269.01	0.811221	7.803690e-51	4.802978e-48
MsG0080048633.01	MsG0380012889.01	0.809191	2.137328e-50	1.246695e-47
MsG0080048633.01	MsG0380013214.01	0.812273	4.605397e-51	2.915393e-48
MsG0080048633.01	MsG0380013219.01	0.836225	1.060138e-56	1.327682e-53
MsG0080048633.01	MsG0380013226.01	0.845810	3.219699e-59	5.431135e-56
MsG0080048633.01	MsG0380013239.01	0.801209	1.003116e-48	4.762959e-46
MsG0080048633.01	MsG0380013415.01	0.835674	1.462309e-56	1.800909e-53
MsG0080048633.01	MsG0380013891.01	-0.813198	2.889344e-51	1.874488e-48
MsG0080048633.01	MsG0380013892.01	-0.818625	1.778063e-52	1.337758e-49
MsG0080048633.01	MsG0380013928.01	-0.828799	7.352121e-55	7.384561e-52
MsG0080048633.01	MsG0380013986.01	-0.838347	3.035796e-57	4.054596e-54
MsG0080048633.01	MsG0380013997.01	-0.819996	8.660925e-53	6.769632e-50
MsG0080048633.01	MsG0380014016.01	-0.832754	7.890973e-56	8.903470e-53
MsG0080048633.01	MsG0380014029.01	-0.832823	7.586236e-56	8.576898e-53
MsG0080048633.01	MsG0380014410.01	0.846433	2.178141e-59	3.748864e-56
MsG0080048633.01	MsG0380014642.01	-0.810001	1.431607e-50	8.531755e-48
MsG0080048633.01	MsG0380014734.01	0.826048	3.358823e-54	3.115260e-51
MsG0080048633.01	MsG0380014735.01	-0.815806	7.655882e-52	5.331838e-49
MsG0080048633.01	MsG0380014881.01	0.821774	3.376299e-53	2.772990e-50
MsG0080048633.01	MsG0380015691.01	0.821312	4.316604e-53	3.499490e-50
MsG0080048633.01	MsG0380015828.01	-0.812107	5.007935e-51	3.155716e-48
MsG0080048633.01	MsG0380016456.01	-0.803560	3.289181e-49	1.658169e-46
MsG0080048633.01	MsG0380016476.01	0.817387	3.385202e-52	2.461939e-49
MsG0080048633.01	MsG0380016935.01	-0.804900	1.729834e-49	9.027082e-47
MsG0080048633.01	MsG0380017102.01	0.801588	8.389188e-49	4.021396e-46
MsG0080048633.01	MsG0380017231.01	0.878176	3.469982e-69	1.793867e-65
MsG0080048633.01	MsG0380017380.01	0.817830	2.690115e-52	1.980312e-49
MsG0080048633.01	MsG0380017989.01	0.807385	5.187323e-50	2.885283e-47
MsG0080048633.01	MsG0380017992.01	0.846189	2.540052e-59	4.336388e-56
MsG0080048633.01	MsG0480019028.01	-0.843161	1.661254e-58	2.576256e-55
MsG0080048633.01	MsG0480019666.01	0.857086	2.073443e-62	5.057291e-59
MsG0080048633.01	MsG0480020051.01	-0.824182	9.271803e-54	8.152762e-51
MsG0080048633.01	MsG0480020722.01	0.814530	1.470340e-51	9.890540e-49
MsG0080048633.01	MsG0480020814.01	0.836167	1.096816e-56	1.371103e-53
MsG0080048633.01	MsG0480021175.01	0.805701	1.175351e-49	6.260932e-47
MsG0080048633.01	MsG0480021604.01	0.817424	3.321992e-52	2.418418e-49
MsG0080048633.01	MsG0480021972.01	0.801525	8.643514e-49	4.136862e-46
MsG0080048633.01	MsG0480022242.01	-0.801495	8.764182e-49	4.191573e-46
MsG0080048633.01	MsG0480022459.01	-0.803263	3.789357e-49	1.895684e-46
MsG0080048633.01	MsG0480023195.01	0.923239	3.452222e-89	1.364565e-84
MsG0080048633.01	MsG0480023322.01	0.872938	2.164966e-67	9.224715e-64
MsG0080048633.01	MsG0480023429.01	0.808657	2.780694e-50	1.598992e-47
MsG0080048633.01	MsG0480023532.01	0.812099	5.026436e-51	3.166779e-48
MsG0080048633.01	MsG0580024442.01	-0.805016	1.635771e-49	8.560773e-47
MsG0080048633.01	MsG0580024493.01	-0.801316	9.538292e-49	4.541168e-46
MsG0080048633.01	MsG0580025023.01	0.856829	2.468778e-62	5.968334e-59
MsG0080048633.01	MsG0580025105.01	-0.809481	1.852779e-50	1.089045e-47
MsG0080048633.01	MsG0580025117.01	0.847710	9.732717e-60	1.745111e-56
MsG0080048633.01	MsG0580025463.01	0.805475	1.311189e-49	6.943445e-47
MsG0080048633.01	MsG0580025486.01	-0.813234	2.837222e-51	1.842451e-48
MsG0080048633.01	MsG0580025822.01	0.837150	6.157687e-57	7.928252e-54
MsG0080048633.01	MsG0580026073.01	-0.801318	9.526896e-49	4.536009e-46
MsG0080048633.01	MsG0580026449.01	0.808740	2.669313e-50	1.538265e-47
MsG0080048633.01	MsG0580027036.01	0.835893	1.286940e-56	1.595358e-53
MsG0080048633.01	MsG0580027276.01	-0.805255	1.457849e-49	7.676384e-47
MsG0080048633.01	MsG0580027641.01	0.837846	4.083576e-57	5.372013e-54
MsG0080048633.01	MsG0580028023.01	0.827630	1.406638e-54	1.365425e-51
MsG0080048633.01	MsG0580028302.01	0.821541	3.821606e-53	3.118123e-50
MsG0080048633.01	MsG0580028330.01	0.804399	2.201423e-49	1.133877e-46
MsG0080048633.01	MsG0580028565.01	0.856258	3.633768e-62	8.620175e-59
MsG0080048633.01	MsG0580029623.01	0.831600	1.522339e-55	1.660124e-52
MsG0080048633.01	MsG0580029792.01	-0.817482	3.222609e-52	2.349821e-49
MsG0080048633.01	MsG0580030179.01	0.803574	3.266120e-49	1.647164e-46
MsG0080048633.01	MsG0680030635.01	-0.802358	5.827946e-49	2.849133e-46
MsG0080048633.01	MsG0680030658.01	-0.816279	6.003062e-52	4.235384e-49
MsG0080048633.01	MsG0680030961.01	0.825394	4.801886e-54	4.371155e-51
MsG0080048633.01	MsG0680031178.01	0.834085	3.675115e-56	4.315214e-53
MsG0080048633.01	MsG0680031841.01	0.822681	2.080276e-53	1.753293e-50
MsG0080048633.01	MsG0680032343.01	0.837761	4.293918e-57	5.634373e-54
MsG0080048633.01	MsG0680035349.01	0.803002	4.290742e-49	2.132122e-46
MsG0080048633.01	MsG0680035464.01	0.803781	2.959742e-49	1.500495e-46
MsG0080048633.01	MsG0680035870.01	-0.805999	1.017712e-49	5.462651e-47
MsG0080048633.01	MsG0780036890.01	0.822740	2.014952e-53	1.701179e-50
MsG0080048633.01	MsG0780037751.01	0.840445	8.657898e-58	1.233543e-54
MsG0080048633.01	MsG0780037982.01	-0.842329	2.764231e-58	4.176948e-55
MsG0080048633.01	MsG0780038307.01	0.804644	1.956566e-49	1.014182e-46
MsG0080048633.01	MsG0780038810.01	0.839088	1.953505e-57	2.668845e-54
MsG0080048633.01	MsG0780038914.01	0.800376	1.483771e-48	6.898181e-46
MsG0080048633.01	MsG0780038983.01	0.817866	2.641112e-52	1.946070e-49
MsG0080048633.01	MsG0780038985.01	0.814853	1.246751e-51	8.459587e-49
MsG0080048633.01	MsG0780039431.01	0.804499	2.098000e-49	1.083384e-46
MsG0080048633.01	MsG0780039642.01	0.800078	1.706427e-48	7.873213e-46
MsG0080048633.01	MsG0780039773.01	0.816189	6.286868e-52	4.424677e-49
MsG0080048633.01	MsG0780039916.01	0.851157	1.065698e-60	2.137412e-57
MsG0080048633.01	MsG0780039923.01	0.809444	1.886695e-50	1.107899e-47
MsG0080048633.01	MsG0780040034.01	0.807925	3.983758e-50	2.247128e-47
MsG0080048633.01	MsG0780040878.01	0.855076	8.040521e-62	1.834087e-58
MsG0080048633.01	MsG0780041079.01	0.811303	7.488833e-51	4.618998e-48
MsG0080048633.01	MsG0780041100.01	0.855240	7.205803e-62	1.652522e-58
MsG0080048633.01	MsG0780041118.01	0.824055	9.927928e-54	8.698028e-51
MsG0080048633.01	MsG0780041180.01	0.818103	2.333555e-52	1.730656e-49
MsG0080048633.01	MsG0780041271.01	0.825582	4.332254e-54	3.964994e-51
MsG0080048633.01	MsG0780041403.01	0.805681	1.187259e-49	6.320764e-47
MsG0080048633.01	MsG0780041531.01	-0.811731	6.044488e-51	3.770750e-48
MsG0080048633.01	MsG0880042122.01	0.831566	1.552791e-55	1.691547e-52
MsG0080048633.01	MsG0880043261.01	0.862398	5.212229e-64	1.524286e-60
MsG0080048633.01	MsG0880043550.01	0.809931	1.482158e-50	8.816588e-48
MsG0080048633.01	MsG0880043551.01	0.811078	8.380159e-51	5.138405e-48
MsG0080048633.01	MsG0880043948.01	0.943915	5.068783e-103	7.035317e-98
MsG0080048633.01	MsG0880043951.01	0.817697	2.882950e-52	2.114457e-49
MsG0080048633.01	MsG0880043961.01	0.859997	2.808018e-63	7.560987e-60
MsG0080048633.01	MsG0880043983.01	0.899430	1.997427e-77	2.469369e-73
MsG0080048633.01	MsG0880043989.01	0.864382	1.266142e-64	3.967579e-61
MsG0080048633.01	MsG0880044688.01	0.847942	8.401930e-60	1.517551e-56
MsG0080048633.01	MsG0880045385.01	-0.804203	2.417512e-49	1.238934e-46
MsG0080048633.01	MsG0880045703.01	-0.804815	1.802302e-49	9.384169e-47
MsG0080048633.01	MsG0880045802.01	0.803664	3.129225e-49	1.581618e-46
MsG0080048633.01	MsG0880045804.01	0.829876	4.027613e-55	4.175580e-52
MsG0080048633.01	MsG0880045854.01	0.803868	2.838356e-49	1.442283e-46
MsG0080048633.01	MsG0880045856.01	0.811343	7.342454e-51	4.533328e-48
MsG0080048633.01	MsG0880045968.01	-0.805133	1.546589e-49	8.118418e-47
MsG0080048633.01	MsG0880046174.01	-0.850939	1.227569e-60	2.444643e-57
MsG0080048633.01	MsG0880046463.01	0.837630	4.639816e-57	6.063289e-54
MsG0080048633.01	MsG0880046693.01	0.803406	3.539738e-49	1.777332e-46
MsG0080048633.01	MsG0880046838.01	-0.801491	8.782494e-49	4.199855e-46
MsG0080048633.01	MsG0880047450.01	0.818918	1.525525e-52	1.157250e-49
MsG0080048633.01	MsG0880047493.01	0.810178	1.311517e-50	7.851603e-48
MsG0080048633.01	MsG0880047714.01	0.809918	1.492447e-50	8.874467e-48

PPI

Gene1	Gene2	Type
MsG0180001107.01	MsG0080048633.01	PPI
MsG0180001100.01	MsG0080048633.01	PPI
MsG0880043953.01	MsG0080048633.01	PPI
MsG0880043941.01	MsG0080048633.01	PPI
MsG0180001109.01	MsG0080048633.01	PPI
MsG0080048633.01	MsG0580025828.01	PPI
MsG0080048633.01	MsG0180001107.01	PPI
MsG0180001108.01	MsG0080048633.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048633.01.T01	MTR_8g045490	92.308	156	12	0	1	156	1	156	1.65e-105	298
MsG0080048633.01.T01	MTR_8g045520	81.529	157	28	1	1	156	1	157	5.68e-93	266
MsG0080048633.01.T01	MTR_8g045400	78.344	157	32	2	1	156	1	156	3.21e-88	254
MsG0080048633.01.T01	MTR_8g045570	76.316	152	36	0	1	152	1	152	1.81e-86	250
MsG0080048633.01.T01	MTR_8g045695	74.510	153	38	1	1	153	1	152	1.06e-83	243
MsG0080048633.01.T01	MTR_8g045555	75.000	152	38	0	1	152	1	152	1.47e-83	242
MsG0080048633.01.T01	MTR_8g045300	69.872	156	46	1	1	155	1	156	1.22e-80	235
MsG0080048633.01.T01	MTR_8g045735	70.588	153	44	1	1	153	1	152	7.30e-80	233
MsG0080048633.01.T01	MTR_8g045665	70.588	153	44	1	1	153	1	152	5.13e-78	228
MsG0080048633.01.T01	MTR_8g045640	69.281	153	46	1	1	153	1	152	5.90e-76	223
MsG0080048633.01.T01	MTR_8g045560	67.974	153	48	1	1	153	1	152	1.16e-74	220
MsG0080048633.01.T01	MTR_1g030810	43.137	153	84	2	1	151	1	152	1.33e-40	134
MsG0080048633.01.T01	MTR_1g030820	40.523	153	88	2	1	151	1	152	3.04e-40	133
MsG0080048633.01.T01	MTR_1g030840	37.179	156	90	4	1	149	1	155	4.74e-29	104
MsG0080048633.01.T01	MTR_8g012550	35.616	146	91	3	6	150	8	151	1.62e-28	103
MsG0080048633.01.T01	MTR_1g031640	38.514	148	82	5	7	152	7	147	5.38e-26	96.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0080048633.01.T01	AT5G28010	36.242	149	92	3	3	149	15	162	7.26e-27	99.4
MsG0080048633.01.T01	AT5G28010	36.242	149	92	3	3	149	15	162	7.26e-27	99.4
MsG0080048633.01.T01	AT1G70890	37.584	149	90	3	3	149	7	154	2.79e-26	97.8
MsG0080048633.01.T01	AT1G70830	34.899	149	94	3	3	149	22	169	5.48e-24	92.0
MsG0080048633.01.T01	AT1G70830	34.899	149	94	3	3	149	22	169	1.02e-23	92.4
MsG0080048633.01.T01	AT1G70840	32.886	149	97	3	3	149	20	167	2.33e-23	90.5
MsG0080048633.01.T01	AT1G70830	34.899	149	94	3	3	149	22	169	3.60e-23	92.0
MsG0080048633.01.T01	AT5G28000	32.886	149	97	3	3	149	13	160	9.61e-23	88.6
MsG0080048633.01.T01	AT1G70830	34.899	149	94	3	3	149	22	169	9.91e-23	92.4
MsG0080048633.01.T01	AT1G70830	33.557	149	96	3	3	149	184	331	3.60e-21	88.2
MsG0080048633.01.T01	AT1G70870	35.948	153	81	4	1	151	1	138	8.70e-22	85.5
MsG0080048633.01.T01	AT1G70830	33.557	149	96	3	3	149	137	284	1.31e-21	88.6
MsG0080048633.01.T01	AT1G70830	30.435	92	63	1	59	149	31	122	6.47e-11	59.3
MsG0080048633.01.T01	AT1G70850	32.886	149	97	3	3	149	9	156	1.67e-21	87.4
MsG0080048633.01.T01	AT1G23120	30.769	143	94	3	7	149	7	144	4.42e-21	84.0
MsG0080048633.01.T01	AT1G70850	32.886	149	97	3	3	149	9	156	4.70e-21	87.4
MsG0080048633.01.T01	AT1G70850	33.094	139	90	3	13	149	175	312	9.04e-20	84.0
MsG0080048633.01.T01	AT1G70850	32.886	149	97	3	3	149	9	156	4.70e-21	87.4
MsG0080048633.01.T01	AT1G70850	33.094	139	90	3	13	149	175	312	9.04e-20	84.0
MsG0080048633.01.T01	AT4G23670	34.641	153	97	3	1	152	1	151	7.55e-21	83.6
MsG0080048633.01.T01	AT1G23130	30.405	148	101	2	3	149	10	156	1.21e-20	83.2
MsG0080048633.01.T01	AT1G23120	30.769	143	94	3	7	149	57	194	1.30e-20	84.0
MsG0080048633.01.T01	AT1G70880	30.872	149	100	3	3	149	8	155	5.31e-20	81.6
MsG0080048633.01.T01	AT2G01520	32.026	153	101	3	1	152	1	151	7.42e-19	78.2
MsG0080048633.01.T01	AT4G23680	32.026	153	101	3	1	152	1	151	2.91e-18	76.6
MsG0080048633.01.T01	AT1G14930	32.298	161	92	5	1	153	1	152	1.15e-17	75.5
MsG0080048633.01.T01	AT2G01530	32.026	153	101	3	1	152	1	151	2.26e-17	74.3
MsG0080048633.01.T01	AT4G14060	32.680	153	100	3	1	152	1	151	2.86e-17	74.3
MsG0080048633.01.T01	AT1G35260	28.966	145	99	3	7	149	6	148	3.74e-17	73.9
MsG0080048633.01.T01	AT1G24020	32.692	156	103	2	1	155	1	155	5.09e-16	71.2
MsG0080048633.01.T01	AT1G24020	32.692	156	103	2	1	155	1	155	5.09e-16	71.2
MsG0080048633.01.T01	AT1G30990	32.000	150	98	4	1	149	1	147	2.18e-15	69.3
MsG0080048633.01.T01	AT1G14940	30.000	150	102	3	1	149	1	148	3.75e-14	66.2
MsG0080048633.01.T01	AT3G26460	32.051	156	98	5	1	152	1	152	8.39e-14	65.1
MsG0080048633.01.T01	AT1G14950	28.947	152	105	3	1	151	1	150	1.37e-13	64.7
MsG0080048633.01.T01	AT1G35310	25.362	138	100	3	13	149	12	147	2.00e-12	61.6
MsG0080048633.01.T01	AT1G14960	28.571	154	107	3	1	153	1	152	8.48e-12	60.1
MsG0080048633.01.T01	AT3G26450	27.273	154	108	4	1	152	1	152	2.95e-11	58.5

Find 41 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGGCACTGCTGCTGCTAAA+TGG	0.310932	contig380end:+8914	MsG0080048633.01.T01:CDS
CTTCCCTTTCTTCTAAGAAA+TGG	0.349077	contig380end:+7791	MsG0080048633.01.T01:exon
TATGTGATGAAATCAATAAA+TGG	0.369456	contig380end:+9247	MsG0080048633.01.T01:three_prime_UTR
CACCCTTATCAATGACTTCA+AGG	0.380806	contig380end:-8891	None:intergenic
TTATAGAGCTATCTTTGCTT+TGG	0.392094	contig380end:-9034	None:intergenic
AATTAGTGTGATATTTGTAA+TGG	0.409729	contig380end:+9131	MsG0080048633.01.T01:three_prime_UTR
ATATTGTTGCATATGCATAT+TGG	0.412178	contig380end:+9155	MsG0080048633.01.T01:three_prime_UTR
TAGTAATGGGTTATTGCATT+GGG	0.416848	contig380end:+9081	MsG0080048633.01.T01:three_prime_UTR
TGTAACAAATAACTAGTAAT+GGG	0.422186	contig380end:+9068	MsG0080048633.01.T01:three_prime_UTR
AGCACCATTTCTTAGAAGAA+AGG	0.435379	contig380end:-7795	None:intergenic
AAACACTGGACTTACGTCAT+AGG	0.436108	contig380end:+7975	MsG0080048633.01.T01:CDS
TTCTAAGAAATGGTGCTCTC+TGG	0.436928	contig380end:+7801	MsG0080048633.01.T01:exon
CATCCTTGAAGTCATTGATA+AGG	0.445764	contig380end:+8888	MsG0080048633.01.T01:CDS
AAGTATTCCATGTAGCCATT+TGG	0.448595	contig380end:-8976	None:intergenic
CTTCTATGTGATGTTTGTAA+TGG	0.450639	contig380end:+9178	MsG0080048633.01.T01:three_prime_UTR
CTAGTAATGGGTTATTGCAT+TGG	0.451009	contig380end:+9080	MsG0080048633.01.T01:three_prime_UTR
AACACTTATAAGCTCTTTGG+TGG	0.457999	contig380end:+8832	MsG0080048633.01.T01:CDS
GCACCATTTCTTAGAAGAAA+GGG	0.460369	contig380end:-7794	None:intergenic
ATGTAACAAATAACTAGTAA+TGG	0.468583	contig380end:+9067	MsG0080048633.01.T01:three_prime_UTR
AACTTCATGAAGGTGAAGAT+TGG	0.478377	contig380end:+7934	MsG0080048633.01.T01:CDS
GGTAAGCTCAGTACTGAAGT+TGG	0.490802	contig380end:+7822	MsG0080048633.01.T01:CDS
AATGGGTTATTGCATTGGGT+TGG	0.493837	contig380end:+9085	MsG0080048633.01.T01:three_prime_UTR
ATCCTTGAAGTCATTGATAA+GGG	0.494628	contig380end:+8889	MsG0080048633.01.T01:CDS
AGATATTGATGAGCACTATA+AGG	0.500590	contig380end:+8855	MsG0080048633.01.T01:CDS
GAACAGATTGTAGAACTTGT+CGG	0.501167	contig380end:-7859	None:intergenic
TATTCCATGTAGCCATTTGG+AGG	0.517921	contig380end:-8973	None:intergenic
AGATTGGCATCACACTGATT+CGG	0.519723	contig380end:+7950	MsG0080048633.01.T01:CDS
AATGGCTACATGGAATACTT+TGG	0.525683	contig380end:+8979	MsG0080048633.01.T01:CDS
TGACCCTCCAAATGGCTACA+TGG	0.526835	contig380end:+8969	MsG0080048633.01.T01:CDS
GAGGATATTGACCCTCCAAA+TGG	0.540200	contig380end:+8961	MsG0080048633.01.T01:CDS
TATGATGAACTCTTTCACAA+AGG	0.552779	contig380end:-7908	None:intergenic
ACACTTTCATCAACTCACAT+AGG	0.573859	contig380end:+7750	None:intergenic
GAAGTCATTGATAAGGGTGA+TGG	0.579318	contig380end:+8895	MsG0080048633.01.T01:CDS
ATCATAATTCACAGATGGCA+AGG	0.582682	contig380end:+8759	MsG0080048633.01.T01:intron
CATCATACAAAACTTCATGA+AGG	0.606616	contig380end:+7924	MsG0080048633.01.T01:CDS
ACACTGATTCGGTTAAACAC+TGG	0.614381	contig380end:+7961	MsG0080048633.01.T01:CDS
ATTCCATGTAGCCATTTGGA+GGG	0.625101	contig380end:-8972	None:intergenic
AGATTGTAGAACTTGTCGGC+GGG	0.646397	contig380end:-7855	None:intergenic
TGAATATGAAAAGATCAATG+AGG	0.667026	contig380end:+8942	MsG0080048633.01.T01:CDS
CAGATTGTAGAACTTGTCGG+CGG	0.688816	contig380end:-7856	None:intergenic
AGTGTGATGTCTGTACATGA+CGG	0.731855	contig380end:+9205	MsG0080048633.01.T01:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGGAATAATAAATATTTATA+AGG	-	contig380end:8604-8623	None:intergenic	10.0%
!!!	ATAGTTTATTTGTTAAAAAA+TGG	+	contig380end:8668-8687	MsG0080048633.01.T01:intron	10.0%
!!!	TAGTTTATTTGTTAAAAAAT+GGG	+	contig380end:8669-8688	MsG0080048633.01.T01:intron	10.0%
!!	AAAAAAAATCAACAATCATT+TGG	+	contig380end:8362-8381	MsG0080048633.01.T01:intron	15.0%
!!	AAAAAAATCAACAATCATTT+GGG	+	contig380end:8363-8382	MsG0080048633.01.T01:intron	15.0%
!!	AATTAAATAAGATGATGATT+TGG	-	contig380end:8037-8056	None:intergenic	15.0%
!!	ACAAATAAAAATGAAAACTT+TGG	-	contig380end:8723-8742	None:intergenic	15.0%
!!	AATTAGTGTGATATTTGTAA+TGG	+	contig380end:9131-9150	MsG0080048633.01.T01:three_prime_UTR	20.0%
!!	ATGTAACAAATAACTAGTAA+TGG	+	contig380end:9067-9086	MsG0080048633.01.T01:three_prime_UTR	20.0%
!!	TATGTGATGAAATCAATAAA+TGG	+	contig380end:9247-9266	MsG0080048633.01.T01:three_prime_UTR	20.0%
!!	TGTAACAAATAACTAGTAAT+GGG	+	contig380end:9068-9087	MsG0080048633.01.T01:three_prime_UTR	20.0%
!!!	TGTTGATTTTTTTTGTCATA+AGG	-	contig380end:8356-8375	None:intergenic	20.0%
!	AAAAACACTTATAAGCTCTT+TGG	+	contig380end:8829-8848	MsG0080048633.01.T01:CDS	25.0%
!	AACCACAGTTATTCTTTATA+TGG	-	contig380end:8579-8598	None:intergenic	25.0%
!	AGATTATGAGATCTCAAAAA+TGG	+	contig380end:8458-8477	MsG0080048633.01.T01:intron	25.0%
!	ATAAGAAAGAAACAAGTACA+TGG	+	contig380end:8142-8161	MsG0080048633.01.T01:intron	25.0%
!	ATATTGTTGCATATGCATAT+TGG	+	contig380end:9155-9174	MsG0080048633.01.T01:three_prime_UTR	25.0%
!	TGAATATGAAAAGATCAATG+AGG	+	contig380end:8942-8961	MsG0080048633.01.T01:CDS	25.0%
!	TGGGAAGAAAAAAAAAATCA+GGG	-	contig380end:8225-8244	None:intergenic	25.0%
!	TTGGGAAGAAAAAAAAAATC+AGG	-	contig380end:8226-8245	None:intergenic	25.0%
!!	CTATCTTGAAAATGGTTTTT+GGG	-	contig380end:8244-8263	None:intergenic	25.0%
!!	TCTATCTTGAAAATGGTTTT+TGG	-	contig380end:8245-8264	None:intergenic	25.0%
	AACATAGTCAAAAGTAGAAG+AGG	-	contig380end:8287-8306	None:intergenic	30.0%
	AGATATTGATGAGCACTATA+AGG	+	contig380end:8855-8874	MsG0080048633.01.T01:CDS	30.0%
	AGCCATATAAAGAATAACTG+TGG	+	contig380end:8574-8593	MsG0080048633.01.T01:intron	30.0%
	ATCCTTGAAGTCATTGATAA+GGG	+	contig380end:8889-8908	MsG0080048633.01.T01:CDS	30.0%
	CATCATACAAAACTTCATGA+AGG	+	contig380end:7924-7943	MsG0080048633.01.T01:CDS	30.0%
	CTTCTATGTGATGTTTGTAA+TGG	+	contig380end:9178-9197	MsG0080048633.01.T01:three_prime_UTR	30.0%
	GGGAAGAAAAAAAAAATCAG+GGG	-	contig380end:8224-8243	None:intergenic	30.0%
	TACATTCTACAAACCAAACA+TGG	+	contig380end:8195-8214	MsG0080048633.01.T01:intron	30.0%
	TATGATGAACTCTTTCACAA+AGG	-	contig380end:7911-7930	None:intergenic	30.0%
	TTATAGAGCTATCTTTGCTT+TGG	-	contig380end:9037-9056	None:intergenic	30.0%
!	TGAAGCATCTATCTTGAAAA+TGG	-	contig380end:8252-8271	None:intergenic	30.0%
!	TTTTTGTCATAAGGTTCTCT+GGG	-	contig380end:8347-8366	None:intergenic	30.0%
!!	CTACTTTTGACTATGTTGAA+CGG	+	contig380end:8290-8309	MsG0080048633.01.T01:intron	30.0%
!!	TACTTTTGACTATGTTGAAC+GGG	+	contig380end:8291-8310	MsG0080048633.01.T01:intron	30.0%
!!	TAGTAATGGGTTATTGCATT+GGG	+	contig380end:9081-9100	MsG0080048633.01.T01:three_prime_UTR	30.0%
!!!	TTTTTTGTCATAAGGTTCTC+TGG	-	contig380end:8348-8367	None:intergenic	30.0%
	AACACTTATAAGCTCTTTGG+TGG	+	contig380end:8832-8851	MsG0080048633.01.T01:CDS	35.0%
	AACTTCATGAAGGTGAAGAT+TGG	+	contig380end:7934-7953	MsG0080048633.01.T01:CDS	35.0%
	AAGTATTCCATGTAGCCATT+TGG	-	contig380end:8979-8998	None:intergenic	35.0%
	AATGGCTACATGGAATACTT+TGG	+	contig380end:8979-8998	MsG0080048633.01.T01:CDS	35.0%
	AGCACCATTTCTTAGAAGAA+AGG	-	contig380end:7798-7817	None:intergenic	35.0%
	ATCATAATTCACAGATGGCA+AGG	+	contig380end:8759-8778	MsG0080048633.01.T01:intron	35.0%
	ATCTGTGAATTATGATGGCA+CGG	-	contig380end:8755-8774	None:intergenic	35.0%
	CATCCTTGAAGTCATTGATA+AGG	+	contig380end:8888-8907	MsG0080048633.01.T01:CDS	35.0%
	GAACAGATTGTAGAACTTGT+CGG	-	contig380end:7862-7881	None:intergenic	35.0%
	GCACCATTTCTTAGAAGAAA+GGG	-	contig380end:7797-7816	None:intergenic	35.0%
	TTGCCATCTGTGAATTATGA+TGG	-	contig380end:8760-8779	None:intergenic	35.0%
!	CTTCCCTTTCTTCTAAGAAA+TGG	+	contig380end:7791-7810	MsG0080048633.01.T01:exon	35.0%
!	TTTTGTCATAAGGTTCTCTG+GGG	-	contig380end:8346-8365	None:intergenic	35.0%
!!	CTAGTAATGGGTTATTGCAT+TGG	+	contig380end:9080-9099	MsG0080048633.01.T01:three_prime_UTR	35.0%
!!	TGATGATTTGGTTATCGATC+AGG	-	contig380end:8025-8044	None:intergenic	35.0%
	AAACACTGGACTTACGTCAT+AGG	+	contig380end:7975-7994	MsG0080048633.01.T01:CDS	40.0%
	AAATCAGGGGTAACCATGTT+TGG	-	contig380end:8211-8230	None:intergenic	40.0%
	AGTGTGATGTCTGTACATGA+CGG	+	contig380end:9205-9224	MsG0080048633.01.T01:three_prime_UTR	40.0%
	ATTCCATGTAGCCATTTGGA+GGG	-	contig380end:8975-8994	None:intergenic	40.0%
	CACCCTTATCAATGACTTCA+AGG	-	contig380end:8894-8913	None:intergenic	40.0%
	GAAGTCATTGATAAGGGTGA+TGG	+	contig380end:8895-8914	MsG0080048633.01.T01:CDS	40.0%
	GTGCCATCATAATTCACAGA+TGG	+	contig380end:8754-8773	MsG0080048633.01.T01:intron	40.0%
	TATTCCATGTAGCCATTTGG+AGG	-	contig380end:8976-8995	None:intergenic	40.0%
	TCTGTGAATTATGATGGCAC+GGG	-	contig380end:8754-8773	None:intergenic	40.0%
!	AGATTGGCATCACACTGATT+CGG	+	contig380end:7950-7969	MsG0080048633.01.T01:CDS	40.0%
!	ATAAGGTTCTCTGGGGAATA+TGG	-	contig380end:8339-8358	None:intergenic	40.0%
!	TTCTAAGAAATGGTGCTCTC+TGG	+	contig380end:7801-7820	MsG0080048633.01.T01:exon	40.0%
!!	AATGGGTTATTGCATTGGGT+TGG	+	contig380end:9085-9104	MsG0080048633.01.T01:three_prime_UTR	40.0%
!!	ACACTGATTCGGTTAAACAC+TGG	+	contig380end:7961-7980	MsG0080048633.01.T01:CDS	40.0%
	AGATTGTAGAACTTGTCGGC+GGG	-	contig380end:7858-7877	None:intergenic	45.0%
	CAGATTGTAGAACTTGTCGG+CGG	-	contig380end:7859-7878	None:intergenic	45.0%
	GAGGATATTGACCCTCCAAA+TGG	+	contig380end:8961-8980	MsG0080048633.01.T01:CDS	45.0%
!	GGTAAGCTCAGTACTGAAGT+TGG	+	contig380end:7822-7841	MsG0080048633.01.T01:CDS	45.0%
!!!	ATATTTTTGTATAAAAAAAA+AGG	-	contig380end:8624-8643	None:intergenic	5.0%
!!!	TTTTATACAAAAATATTTAT+TGG	+	contig380end:8628-8647	MsG0080048633.01.T01:intron	5.0%
	ATGGCACTGCTGCTGCTAAA+TGG	+	contig380end:8914-8933	MsG0080048633.01.T01:CDS	50.0%
	TGACCCTCCAAATGGCTACA+TGG	+	contig380end:8969-8988	MsG0080048633.01.T01:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
contig380end	gene	7757	9282	7757	ID=MsG0080048633.01;Name=MsG0080048633.01
contig380end	mRNA	7757	9282	7757	ID=MsG0080048633.01.T01;Parent=MsG0080048633.01;Name=MsG0080048633.01.T01;_AED=0.26;_eAED=0.26;_QI=53\|1\|1\|1\|1\|1\|2\|226\|156
contig380end	exon	8773	9282	8773	ID=MsG0080048633.01.T01:exon:3934;Parent=MsG0080048633.01.T01
contig380end	exon	7757	7996	7757	ID=MsG0080048633.01.T01:exon:3933;Parent=MsG0080048633.01.T01
contig380end	five_prime_UTR	7757	7809	7757	ID=MsG0080048633.01.T01:five_prime_utr;Parent=MsG0080048633.01.T01
contig380end	CDS	7810	7996	7810	ID=MsG0080048633.01.T01:cds;Parent=MsG0080048633.01.T01
contig380end	CDS	8773	9056	8773	ID=MsG0080048633.01.T01:cds;Parent=MsG0080048633.01.T01
contig380end	three_prime_UTR	9057	9282	9057	ID=MsG0080048633.01.T01:three_prime_utr;Parent=MsG0080048633.01.T01

Gene Sequence

>MsG0080048633.01.T01

ATGGTGCTCTCTGGTAAGCTCAGTACTGAAGTTGGAATCAAAACACCCGCCGACAAGTTCTACAATCTGTTCATAACAGAACTTCATGAAGTGCAAAACCTTTGTGAAAGAGTTCATCATACAAAACTTCATGAAGGTGAAGATTGGCATCACACTGATTCGGTTAAACACTGGACTTACGTCATAGATGGCAAGGTACATACATGTCACGAGAGAGTTGAAGAAGTTGATGAACTGAATAAAAAAAACACTTATAAGCTCTTTGGTGGAGATATTGATGAGCACTATAAGGTCTTTAAGCTCATCCTTGAAGTCATTGATAAGGGTGATGGCACTGCTGCTGCTAAATGGACAGTTGAATATGAAAAGATCAATGAGGATATTGACCCTCCAAATGGCTACATGGAATACTTTGGCAAAATCACTAGAGATGTTGATGCTCATCTTGCCAAAGCAAAGATAGCTCTATAA

Protein sequence

>MsG0080048633.01.T01

MVLSGKLSTEVGIKTPADKFYNLFITELHEVQNLCERVHHTKLHEGEDWHHTDSVKHWTYVIDGKVHTCHERVEEVDELNKKNTYKLFGGDIDEHYKVFKLILEVIDKGDGTAAAKWTVEYEKINEDIDPPNGYMEYFGKITRDVDAHLAKAKIAL*