AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046174.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046174.01.T01 MTR_4g102230 82.328 232 18 2 4 212 1 232 4.19e-131 368
MsG0880046174.01.T01 MTR_4g102230 94.643 168 3 1 4 165 1 168 3.78e-114 323
MsG0880046174.01.T01 MTR_4g102230 94.643 168 3 1 4 165 1 168 2.33e-113 322
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046174.01.T01 AT1G62850 51.339 224 74 6 16 212 20 235 1.41e-56 179
MsG0880046174.01.T01 AT1G62850 51.339 224 74 6 16 212 20 235 1.41e-56 179
MsG0880046174.01.T01 AT1G62850 58.125 160 49 5 16 165 20 171 6.64e-48 156

Find 91 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTAATACTACCATAAT+TGG 0.127862 8:+70185667 MsG0880046174.01.T01:three_prime_UTR
TCCAATTATGGTAGTATTAA+AGG 0.179603 8:-70185668 None:intergenic
GATAGATAGTTTAAAGATTC+TGG 0.203643 8:-70185514 None:intergenic
GCTTCCTCAGCTTCAGATTC+TGG 0.206596 8:+70180595 MsG0880046174.01.T01:CDS
TAGATCGATGTTCGGCTTCT+TGG 0.249968 8:-70180663 MsG0880046175.01.T01:intron
AAACTTCTGTGTTCTAGTTT+TGG 0.258270 8:-70183864 None:intergenic
ATGTATGATGTATCCAATTA+TGG 0.303636 8:-70185680 None:intergenic
GAATTCGACATGTGTCTTTA+CGG 0.331461 8:+70185920 MsG0880046174.01.T01:three_prime_UTR
ACCTTCACTTGGTAAGGGTT+TGG 0.332636 8:+70186078 MsG0880046174.01.T01:three_prime_UTR
AAGCAATGTACTACTGGAAT+TGG 0.353382 8:-70186033 None:intergenic
ATTAATGTTGTTTGAATCCT+TGG 0.353412 8:-70185740 None:intergenic
TTTGTACTTGGGAGAAGGTT+GGG 0.373564 8:+70185974 MsG0880046174.01.T01:three_prime_UTR
GTCAGCTTAAGCCGCAATTA+CGG 0.379476 8:+70185897 MsG0880046174.01.T01:three_prime_UTR
TCAGCTTAAGCCGCAATTAC+GGG 0.387371 8:+70185898 MsG0880046174.01.T01:three_prime_UTR
CTTCCTCAGCTTCAGATTCT+GGG 0.393020 8:+70180596 MsG0880046174.01.T01:CDS
CCCATTCCTAAAATCACTTT+GGG 0.395822 8:+70180706 MsG0880046174.01.T01:CDS
TGAAGAGAGGAGAGGAAGAA+AGG 0.398042 8:-70180535 MsG0880046175.01.T01:intron
CCCCATTCCTAAAATCACTT+TGG 0.402112 8:+70180705 MsG0880046174.01.T01:CDS
AATTCGACATGTGTCTTTAC+GGG 0.406954 8:+70185921 MsG0880046174.01.T01:three_prime_UTR
AAGAAAGAGGGTTGGGATTG+TGG 0.408970 8:+70180372 MsG0880046174.01.T01:five_prime_UTR
AATGTTACCTTCACTTGGTA+AGG 0.410230 8:+70186072 MsG0880046174.01.T01:three_prime_UTR
TGAAACAAAACTTGGATGTA+TGG 0.414686 8:+70180409 MsG0880046174.01.T01:exon
ATAGTAAAGCAATGTACTAC+TGG 0.416302 8:-70186039 None:intergenic
AGAGGAAGAAAGGGCGAGAA+AGG 0.436039 8:-70180525 MsG0880046175.01.T01:intron
GAGGGTTGGGATTGTGGACG+TGG 0.438987 8:+70180378 MsG0880046174.01.T01:five_prime_UTR
GAAGAGAGGAGAGGAAGAAA+GGG 0.445403 8:-70180534 MsG0880046175.01.T01:intron
AAAGAAGAAGTAAAAGTAGT+TGG 0.447871 8:+70185474 MsG0880046174.01.T01:CDS
CGGCTTCTTGGAGAAGCTCA+TGG 0.448424 8:-70180651 MsG0880046175.01.T01:intron
ATTGGCTAAGTGAAAGGGTC+AGG 0.448821 8:+70183042 MsG0880046174.01.T01:CDS
AAAAGAAAAGAAAGAGGGTT+GGG 0.454320 8:+70180365 MsG0880046174.01.T01:five_prime_UTR
CAGGGAGAAGATTATGCAAA+TGG 0.463990 8:+70183061 MsG0880046174.01.T01:CDS
GAGCTACGATTTAATGCAAT+AGG 0.468093 8:+70185823 MsG0880046174.01.T01:three_prime_UTR
GTAATGCGAAGAAGAGAAGA+AGG 0.469023 8:-70180496 MsG0880046175.01.T01:intron
CAAAAGAAAAGAAAAGAAAG+AGG 0.469548 8:+70180359 MsG0880046174.01.T01:five_prime_UTR
AAGAAGAAGTAAAAGTAGTT+GGG 0.476573 8:+70185475 MsG0880046174.01.T01:CDS
GAGACGTTTGTGCTCTCCTA+TGG 0.480721 8:-70185417 None:intergenic
TTTAAACCTGAAACAAAACT+TGG 0.487818 8:+70180401 MsG0880046174.01.T01:five_prime_UTR
ACATCATGACATCAGATGAT+TGG 0.489650 8:+70185705 MsG0880046174.01.T01:three_prime_UTR
GAAAAGAAAAGAAAGAGGGT+TGG 0.492387 8:+70180364 MsG0880046174.01.T01:five_prime_UTR
CATGAAATGTTACCTTCACT+TGG 0.497961 8:+70186067 MsG0880046174.01.T01:three_prime_UTR
GTCGACATGCGGTTCAATGT+TGG 0.505525 8:+70183011 MsG0880046174.01.T01:CDS
TTTGCCAGAAGCGGAGGACC+TGG 0.506647 8:+70180847 MsG0880046174.01.T01:CDS
TTGTAGATAAAAGCAACATA+TGG 0.511382 8:-70185865 None:intergenic
CAAAACTTGGATGTATGGTA+TGG 0.514654 8:+70180414 MsG0880046174.01.T01:exon
GGCTTCAACAACCACTAGAA+TGG 0.521120 8:+70180435 MsG0880046174.01.T01:CDS
TTGCCAGAAGCGGAGGACCT+GGG 0.524800 8:+70180848 MsG0880046174.01.T01:CDS
AAAATTCAATAGAATGGAAG+AGG 0.526529 8:-70183888 None:intergenic
GCGCATCGAATTGCAGTGGC+GGG 0.539361 8:-70180574 MsG0880046175.01.T01:intron
AGTATCCTCTCGGCTTTCGC+AGG 0.539470 8:+70180627 MsG0880046174.01.T01:CDS
AGCGGAGATAGATCGATGTT+CGG 0.541156 8:-70180671 MsG0880046175.01.T01:intron
ATTGAACCGCATGTCGACCT+TGG 0.541896 8:-70183006 None:intergenic
AAAAGAAAAGAAAAGAAAGA+GGG 0.542786 8:+70180360 MsG0880046174.01.T01:five_prime_UTR
TGCCAGAAGCGGAGGACCTG+GGG 0.543557 8:+70180849 MsG0880046174.01.T01:CDS
GGCACATTGGCTAAGTGAAA+GGG 0.546502 8:+70183037 MsG0880046174.01.T01:CDS
TATTCCTTTCACCATTCTAG+TGG 0.547459 8:-70180446 MsG0880046175.01.T01:intron
CACTTCTGTAGGGCTGCCAT+AGG 0.548523 8:+70185401 MsG0880046174.01.T01:intron
ATGTTACCTTCACTTGGTAA+GGG 0.549463 8:+70186073 MsG0880046174.01.T01:three_prime_UTR
AAAATCGTATGAACAAGGAT+GGG 0.550226 8:+70183822 MsG0880046174.01.T01:CDS
AATGCGAAGAAGAGAAGAAG+GGG 0.560405 8:-70180494 MsG0880046175.01.T01:intron
AGGCACATTGGCTAAGTGAA+AGG 0.561094 8:+70183036 MsG0880046174.01.T01:CDS
TACGGGAAGTCAACAACCCT+GGG 0.571478 8:+70185938 MsG0880046174.01.T01:three_prime_UTR
AACAACATTAATCAACATGA+AGG 0.575498 8:+70185751 MsG0880046174.01.T01:three_prime_UTR
CTATCAGAAACTAAATCACA+AGG 0.584249 8:-70185999 None:intergenic
TAATGCGAAGAAGAGAAGAA+GGG 0.588164 8:-70180495 MsG0880046175.01.T01:intron
CATGCGGTTCAATGTTGGAA+AGG 0.591093 8:+70183016 MsG0880046174.01.T01:CDS
ATGTCGAATTCCCGTAATTG+CGG 0.592225 8:-70185908 None:intergenic
AGTGTTGGTCAAATTTGTGA+TGG 0.593127 8:+70185801 MsG0880046174.01.T01:three_prime_UTR
AGCGCATCGAATTGCAGTGG+CGG 0.596376 8:-70180575 MsG0880046175.01.T01:intron
GCCAAACCCTTACCAAGTGA+AGG 0.603263 8:-70186079 None:intergenic
GGAACAACAAAGTATCCTCT+CGG 0.606425 8:+70180617 MsG0880046174.01.T01:CDS
CAAACGTCTCAAAAGCAAGA+AGG 0.607475 8:+70185430 MsG0880046174.01.T01:CDS
TTACGGGAAGTCAACAACCC+TGG 0.618750 8:+70185937 MsG0880046174.01.T01:three_prime_UTR
TCAATGTTGGAAAGGCACAT+TGG 0.618902 8:+70183024 MsG0880046174.01.T01:CDS
AAATCGTATGAACAAGGATG+GGG 0.621165 8:+70183823 MsG0880046174.01.T01:CDS
ATGCAGCAATAAAACCACAT+TGG 0.623860 8:-70185778 None:intergenic
GTTCCCAGAATCTGAAGCTG+AGG 0.628074 8:-70180599 MsG0880046175.01.T01:intron
AATTGCGGCTTAAGCTGACA+AGG 0.632699 8:-70185893 None:intergenic
TTGGCTAAGTGAAAGGGTCA+GGG 0.636328 8:+70183043 MsG0880046174.01.T01:CDS
CGAGCGCTGTAATTGAAGAG+AGG 0.641440 8:-70180548 MsG0880046175.01.T01:intron
ACAACCACTAGAATGGTGAA+AGG 0.641721 8:+70180442 MsG0880046174.01.T01:CDS
ATGCGAAGAAGAGAAGAAGG+GGG 0.642820 8:-70180493 MsG0880046175.01.T01:intron
GCCAGAAGCGGAGGACCTGG+GGG 0.646239 8:+70180850 MsG0880046174.01.T01:CDS
ATTGGTTGAAGATATAACCA+AGG 0.657210 8:+70185723 MsG0880046174.01.T01:three_prime_UTR
TATCAGAAACTAAATCACAA+GGG 0.677403 8:-70185998 None:intergenic
GCTGTAATTGAAGAGAGGAG+AGG 0.684565 8:-70180543 MsG0880046175.01.T01:intron
GGAAGCGCATCGAATTGCAG+TGG 0.684620 8:-70180578 MsG0880046175.01.T01:intron
AACATGAAGGATATCCAATG+TGG 0.701069 8:+70185764 MsG0880046174.01.T01:three_prime_UTR
ATTGCGGCTTAAGCTGACAA+GGG 0.711145 8:-70185892 None:intergenic
ATGGACCTGCGAAAGCCGAG+AGG 0.719112 8:-70180632 MsG0880046175.01.T01:intron
TGAACACCAAGGTCGACATG+CGG 0.719333 8:+70183000 MsG0880046174.01.T01:CDS
TGATTGTACAGTGAACACCA+AGG 0.820851 8:+70182989 MsG0880046174.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATGTTTCTTATAAATAA+TGG - Chr8:70183662-70183681 None:intergenic 10.0%
!! TATAGAAAAAAAATATTAGA+TGG + Chr8:70183397-70183416 MsG0880046174.01.T01:intron 10.0%
!! TTTATAAGAAACATATTTAT+AGG + Chr8:70183665-70183684 MsG0880046174.01.T01:intron 10.0%
!! AATACAAAAATTCAATAGAA+TGG - Chr8:70183897-70183916 None:intergenic 15.0%
!! ACATATAATTATAACTTCAA+AGG - Chr8:70184997-70185016 None:intergenic 15.0%
!! AGTTAAATTTCATACAAAAT+GGG + Chr8:70183241-70183260 MsG0880046174.01.T01:intron 15.0%
!! ATAAATATTTGTAAGCTAAT+AGG + Chr8:70183503-70183522 MsG0880046174.01.T01:intron 15.0%
!! ATATTTATAGAGAAAAAGAA+AGG - Chr8:70183491-70183510 None:intergenic 15.0%
!! CATATAATTATAACTTCAAA+GGG - Chr8:70184996-70185015 None:intergenic 15.0%
!! TAAAATAAATCAATCTTCAA+AGG + Chr8:70181176-70181195 MsG0880046174.01.T01:intron 15.0%
!! TAAATATTTGTAAGCTAATA+GGG + Chr8:70183504-70183523 MsG0880046174.01.T01:intron 15.0%
!! TAGTTAAATTTCATACAAAA+TGG + Chr8:70183240-70183259 MsG0880046174.01.T01:intron 15.0%
!! TATTTATAGAGAAAAAGAAA+GGG - Chr8:70183490-70183509 None:intergenic 15.0%
!! TTAAAATACGGTTTATTATT+TGG + Chr8:70185313-70185332 MsG0880046174.01.T01:intron 15.0%
!!! AATTCATTTTATAAGGTATT+AGG + Chr8:70180944-70180963 MsG0880046174.01.T01:intron 15.0%
!!! GATTTTTATATAGTTTTGTT+GGG + Chr8:70180801-70180820 MsG0880046174.01.T01:intron 15.0%
!!! TATCTAATGTAAATTTTGTA+GGG + Chr8:70182590-70182609 MsG0880046174.01.T01:intron 15.0%
!!! TCTATGTTTTTTTTGTTTAA+GGG + Chr8:70180916-70180935 MsG0880046174.01.T01:intron 15.0%
!!! TGATTTTTATATAGTTTTGT+TGG + Chr8:70180800-70180819 MsG0880046174.01.T01:intron 15.0%
!! AAAACATTCATAAATAACAG+AGG + Chr8:70181756-70181775 MsG0880046174.01.T01:intron 20.0%
!! AAAAGAAAAGAAAAGAAAGA+GGG + Chr8:70180360-70180379 MsG0880046174.01.T01:five_prime_UTR 20.0%
!! AAACATTCATAAATAACAGA+GGG + Chr8:70181757-70181776 MsG0880046174.01.T01:intron 20.0%
!! AAATACTTTAAACATCTTGA+AGG + Chr8:70181394-70181413 MsG0880046174.01.T01:intron 20.0%
!! ACAAAATTTACATTAGATAC+AGG - Chr8:70182589-70182608 None:intergenic 20.0%
!! AGAATGACATAAAAGAAATT+TGG - Chr8:70185598-70185617 None:intergenic 20.0%
!! ATACATATTCTTTATTCTTC+AGG + Chr8:70185290-70185309 MsG0880046174.01.T01:intron 20.0%
!! CAAAATTTACATTAGATACA+GGG - Chr8:70182588-70182607 None:intergenic 20.0%
!! GAAAAAAATCTTAATAGCTA+AGG + Chr8:70181028-70181047 MsG0880046174.01.T01:intron 20.0%
!! TAATTATATGTAACTCTTTG+TGG + Chr8:70185006-70185025 MsG0880046174.01.T01:intron 20.0%
!! TATAATTGTTGAGAAAAAAG+TGG + Chr8:70181846-70181865 MsG0880046174.01.T01:intron 20.0%
!! TCAATTTAAACTGATATGAA+GGG - Chr8:70182279-70182298 None:intergenic 20.0%
!! TGTAATTGAAAAGGAATTAA+GGG - Chr8:70185097-70185116 None:intergenic 20.0%
!! TTAACTATTATTTAGCAAGA+AGG - Chr8:70183227-70183246 None:intergenic 20.0%
!! TTAATTCAACATGATATACA+AGG - Chr8:70180994-70181013 MsG0880046175.01.T01:intron 20.0%
!! TTCTTCTTTACTATCTATAT+TGG + Chr8:70184607-70184626 MsG0880046174.01.T01:intron 20.0%
!!! AAATCAAATTCTAAGAGTTT+TGG + Chr8:70184479-70184498 MsG0880046174.01.T01:intron 20.0%
!!! ACTGAAGTATTTAAGTTTTA+AGG - Chr8:70184082-70184101 None:intergenic 20.0%
!!! ATCTAATGTAAATTTTGTAG+GGG + Chr8:70182591-70182610 MsG0880046174.01.T01:intron 20.0%
!!! ATTCTTGATTGAAGTATTAA+AGG + Chr8:70184556-70184575 MsG0880046174.01.T01:intron 20.0%
!!! ATTTAAAATGCCACTATTAT+TGG - Chr8:70184214-70184233 None:intergenic 20.0%
!!! CTATGTTTTTTTTGTTTAAG+GGG + Chr8:70180917-70180936 MsG0880046174.01.T01:intron 20.0%
!!! CTATTTTAAGTTTTTTTGCT+TGG + Chr8:70182116-70182135 MsG0880046174.01.T01:intron 20.0%
!!! GTATCTAATGTAAATTTTGT+AGG + Chr8:70182589-70182608 MsG0880046174.01.T01:intron 20.0%
!!! GTCTATGTTTTTTTTGTTTA+AGG + Chr8:70180915-70180934 MsG0880046174.01.T01:intron 20.0%
!!! TAGAATTTGATTTACTATGA+GGG - Chr8:70184472-70184491 None:intergenic 20.0%
!!! TGTTTTGAAAGATATAACAA+TGG + Chr8:70185140-70185159 MsG0880046174.01.T01:intron 20.0%
!!! TTAGAATTTGATTTACTATG+AGG - Chr8:70184473-70184492 None:intergenic 20.0%
!!! TTATTCTTCAGGTTAAAATA+CGG + Chr8:70185301-70185320 MsG0880046174.01.T01:intron 20.0%
!!! TTCTATTACTTATTTTTCTC+TGG + Chr8:70184306-70184325 MsG0880046174.01.T01:intron 20.0%
!!! TTTAAAATGCCACTATTATT+GGG - Chr8:70184213-70184232 None:intergenic 20.0%
!!! TTTTGTAATTTGTAGGATTA+TGG - Chr8:70182550-70182569 None:intergenic 20.0%
! AAAATTCAATAGAATGGAAG+AGG - Chr8:70183891-70183910 None:intergenic 25.0%
! AAAGAAGAAGTAAAAGTAGT+TGG + Chr8:70185474-70185493 MsG0880046174.01.T01:CDS 25.0%
! AAATGGATCTTATATTAAGG+GGG - Chr8:70184899-70184918 None:intergenic 25.0%
! AACAACATTAATCAACATGA+AGG + Chr8:70185751-70185770 MsG0880046174.01.T01:three_prime_UTR 25.0%
! AAGAAGAAGTAAAAGTAGTT+GGG + Chr8:70185475-70185494 MsG0880046174.01.T01:CDS 25.0%
! AATAGCTAAGAAAATCAACA+TGG - Chr8:70182101-70182120 None:intergenic 25.0%
! AATTTATGACTCTTTACCTA+CGG - Chr8:70183536-70183555 None:intergenic 25.0%
! ACATAAACCTTAACTTTGTA+CGG + Chr8:70183633-70183652 MsG0880046174.01.T01:intron 25.0%
! ACTAAGTTGTTTATCCAAAT+AGG + Chr8:70182524-70182543 MsG0880046174.01.T01:intron 25.0%
! ATAGCTAAGAAAATCAACAT+GGG - Chr8:70182100-70182119 None:intergenic 25.0%
! ATGTATGATGTATCCAATTA+TGG - Chr8:70185683-70185702 None:intergenic 25.0%
! CAAAAGAAAAGAAAAGAAAG+AGG + Chr8:70180359-70180378 MsG0880046174.01.T01:five_prime_UTR 25.0%
! GAAATGGATCTTATATTAAG+GGG - Chr8:70184900-70184919 None:intergenic 25.0%
! GATAGATAGTTTAAAGATTC+TGG - Chr8:70185517-70185536 None:intergenic 25.0%
! GGAAATGGATCTTATATTAA+GGG - Chr8:70184901-70184920 None:intergenic 25.0%
! GTAATTGAAAAGGAATTAAG+GGG - Chr8:70185096-70185115 None:intergenic 25.0%
! GTCAATTTAAACTGATATGA+AGG - Chr8:70182280-70182299 None:intergenic 25.0%
! GTGTAATTGAAAAGGAATTA+AGG - Chr8:70185098-70185117 None:intergenic 25.0%
! GTTCATGAATACATAAGTAA+AGG - Chr8:70182179-70182198 None:intergenic 25.0%
! TATCAGAAACTAAATCACAA+GGG - Chr8:70186001-70186020 None:intergenic 25.0%
! TCCAATTATGGTAGTATTAA+AGG - Chr8:70185671-70185690 None:intergenic 25.0%
! TCCTTTAATACTACCATAAT+TGG + Chr8:70185667-70185686 MsG0880046174.01.T01:three_prime_UTR 25.0%
! TGGAAATGGATCTTATATTA+AGG - Chr8:70184902-70184921 None:intergenic 25.0%
! TTAAAACTCAATTGAAGCTA+CGG - Chr8:70181080-70181099 MsG0880046175.01.T01:intron 25.0%
! TTATGAAATGGGGAAAAAAT+AGG + Chr8:70185174-70185193 MsG0880046174.01.T01:intron 25.0%
! TTATTCTTTCCCAATAATAG+TGG + Chr8:70184201-70184220 MsG0880046174.01.T01:intron 25.0%
! TTGTAGATAAAAGCAACATA+TGG - Chr8:70185868-70185887 None:intergenic 25.0%
! TTTAAACCTGAAACAAAACT+TGG + Chr8:70180401-70180420 MsG0880046174.01.T01:five_prime_UTR 25.0%
!! AAAAGAAATTTGGTAATAGC+AGG - Chr8:70185588-70185607 None:intergenic 25.0%
!! ATGATTTCAGTAGAATGTTT+TGG + Chr8:70181646-70181665 MsG0880046174.01.T01:intron 25.0%
!! ATTAATGTTGTTTGAATCCT+TGG - Chr8:70185743-70185762 None:intergenic 25.0%
!! ATTCGTTTTATATCCATGTT+GGG + Chr8:70182632-70182651 MsG0880046174.01.T01:intron 25.0%
!! ATTTGGTTAACATTTTGCTA+AGG + Chr8:70185330-70185349 MsG0880046174.01.T01:intron 25.0%
!! GGGTAAGAATTCATTTTATA+AGG + Chr8:70180937-70180956 MsG0880046174.01.T01:intron 25.0%
!! TCATTCATTTTCTTCATTCT+CGG + Chr8:70184441-70184460 MsG0880046174.01.T01:intron 25.0%
!! TGCTTTTCTGTTTATGAAAT+GGG + Chr8:70185163-70185182 MsG0880046174.01.T01:intron 25.0%
!! TTTAAGTTATTAACTGCAAG+TGG - Chr8:70182956-70182975 None:intergenic 25.0%
!! TTTGGTTAACATTTTGCTAA+GGG + Chr8:70185331-70185350 MsG0880046174.01.T01:intron 25.0%
!!! ACTTTTGTTATAAAGACAGT+AGG - Chr8:70184674-70184693 None:intergenic 25.0%
!!! CTTTTCTTTGAGGAAATTAT+TGG - Chr8:70184821-70184840 None:intergenic 25.0%
!!! GTATTTTTTTCATTGTATGC+TGG + Chr8:70183912-70183931 MsG0880046174.01.T01:CDS 25.0%
!!! TATTACTTATTTTTCTCTGG+TGG + Chr8:70184309-70184328 MsG0880046174.01.T01:intron 25.0%
AAAAATCGTATGAACAAGGA+TGG + Chr8:70183821-70183840 MsG0880046174.01.T01:CDS 30.0%
AAAAGAAAAGAAAGAGGGTT+GGG + Chr8:70180365-70180384 MsG0880046174.01.T01:five_prime_UTR 30.0%
AAAATCGTATGAACAAGGAT+GGG + Chr8:70183822-70183841 MsG0880046174.01.T01:CDS 30.0%
AAACAGTCAATCACATGATT+TGG - Chr8:70183117-70183136 None:intergenic 30.0%
AACACTTTCTTACCATAAAG+GGG - Chr8:70184945-70184964 None:intergenic 30.0%
AAGTCCATAGTCTACTTATT+TGG + Chr8:70184690-70184709 MsG0880046174.01.T01:intron 30.0%
AATAGCTAAGGAAATCAACA+TGG + Chr8:70181040-70181059 MsG0880046174.01.T01:intron 30.0%
AATGGATCTTATATTAAGGG+GGG - Chr8:70184898-70184917 None:intergenic 30.0%
ACAAACATCTTTGAGCAATA+TGG + Chr8:70181798-70181817 MsG0880046174.01.T01:intron 30.0%
ACCATTTGTGTATATCTAGT+TGG + Chr8:70183719-70183738 MsG0880046174.01.T01:intron 30.0%
ACTTATTAGAGCTTATGTAC+TGG + Chr8:70182298-70182317 MsG0880046174.01.T01:intron 30.0%
AGGATTAAAGAGAAGGAAAA+TGG + Chr8:70184722-70184741 MsG0880046174.01.T01:intron 30.0%
AGTTGAAGATGCTTGATATA+AGG - Chr8:70181154-70181173 MsG0880046175.01.T01:CDS 30.0%
ATAGCTAAGGAAATCAACAT+GGG + Chr8:70181041-70181060 MsG0880046174.01.T01:intron 30.0%
ATAGTAAAGCAATGTACTAC+TGG - Chr8:70186042-70186061 None:intergenic 30.0%
ATTATAACTTCAAAGGGAAG+AGG - Chr8:70184990-70185009 None:intergenic 30.0%
ATTGAATCAGGTAAAAGCTA+CGG - Chr8:70181116-70181135 MsG0880046175.01.T01:intron 30.0%
ATTGGTTGAAGATATAACCA+AGG + Chr8:70185723-70185742 MsG0880046174.01.T01:three_prime_UTR 30.0%
ATTGTGATATGATAGGAAAC+TGG + Chr8:70182678-70182697 MsG0880046174.01.T01:intron 30.0%
CAACACTTTCTTACCATAAA+GGG - Chr8:70184946-70184965 None:intergenic 30.0%
CAACATGGATATAAAACGAA+TGG - Chr8:70182633-70182652 None:intergenic 30.0%
CATGAATACATAAGTAAAGG+AGG - Chr8:70182176-70182195 None:intergenic 30.0%
CCATTTGTGTATATCTAGTT+GGG + Chr8:70183720-70183739 MsG0880046174.01.T01:intron 30.0%
CTAAGTCTGTGTAATTGAAA+AGG - Chr8:70185106-70185125 None:intergenic 30.0%
CTATCAGAAACTAAATCACA+AGG - Chr8:70186002-70186021 None:intergenic 30.0%
CTCAAGTTAAAGCACATTAT+TGG - Chr8:70183338-70183357 None:intergenic 30.0%
CTGTTATAGAAGAAAGGATA+GGG + Chr8:70182779-70182798 MsG0880046174.01.T01:intron 30.0%
CTTAGTAAGTTCACGATTAT+TGG + Chr8:70185539-70185558 MsG0880046174.01.T01:intron 30.0%
GACTTTCTGTTATAGAAGAA+AGG + Chr8:70182773-70182792 MsG0880046174.01.T01:intron 30.0%
GATTAAAGAGAAGGAAAATG+GGG + Chr8:70184724-70184743 MsG0880046174.01.T01:intron 30.0%
GGAGTAGAAATCATATAGAA+AGG + Chr8:70180965-70180984 MsG0880046174.01.T01:intron 30.0%
GGATTAAAGAGAAGGAAAAT+GGG + Chr8:70184723-70184742 MsG0880046174.01.T01:intron 30.0%
GTATTTGTAGAGTAACAAAG+TGG - Chr8:70181380-70181399 None:intergenic 30.0%
GTTAGCATTAGAATTACCAA+GGG + Chr8:70185359-70185378 MsG0880046174.01.T01:intron 30.0%
GTTGAAGATGCTTGATATAA+GGG - Chr8:70181153-70181172 MsG0880046175.01.T01:CDS 30.0%
TAGAACAACTCAATCTTCAA+AGG - Chr8:70181911-70181930 None:intergenic 30.0%
TATTAAAGGACTTCGCAAAT+TGG + Chr8:70184570-70184589 MsG0880046174.01.T01:intron 30.0%
TCAACACTTTCTTACCATAA+AGG - Chr8:70184947-70184966 None:intergenic 30.0%
TCAAGGAATGAGAAAATTGA+TGG - Chr8:70180744-70180763 MsG0880046175.01.T01:intron 30.0%
TCTGTTATAGAAGAAAGGAT+AGG + Chr8:70182778-70182797 MsG0880046174.01.T01:intron 30.0%
TCTTGAATTGTATTGTTCCT+TGG + Chr8:70183792-70183811 MsG0880046174.01.T01:intron 30.0%
TGAAACAAAACTTGGATGTA+TGG + Chr8:70180409-70180428 MsG0880046174.01.T01:exon 30.0%
TGAAGAAAAATCGCAGAATA+AGG - Chr8:70183950-70183969 None:intergenic 30.0%
TGTAAACAATGTTAGTCATG+AGG - Chr8:70183616-70183635 None:intergenic 30.0%
TGTGTGTATTGTGATATGAT+AGG + Chr8:70182671-70182690 MsG0880046174.01.T01:intron 30.0%
TGTTAGCATTAGAATTACCA+AGG + Chr8:70185358-70185377 MsG0880046174.01.T01:intron 30.0%
TGTTATAGAAGAAAGGATAG+GGG + Chr8:70182780-70182799 MsG0880046174.01.T01:intron 30.0%
TTTGGATAAACAACTTAGTG+AGG - Chr8:70182523-70182542 None:intergenic 30.0%
! AAATGCTTTAAACGTCTTGA+AGG - Chr8:70181709-70181728 None:intergenic 30.0%
! ACAAGTTGAAGAAGATGTTT+GGG + Chr8:70181930-70181949 MsG0880046174.01.T01:intron 30.0%
! CATTCATTTTCTTCATTCTC+GGG + Chr8:70184442-70184461 MsG0880046174.01.T01:intron 30.0%
! CATTCGTTTTATATCCATGT+TGG + Chr8:70182631-70182650 MsG0880046174.01.T01:intron 30.0%
! GCTTTTCTGTTTATGAAATG+GGG + Chr8:70185164-70185183 MsG0880046174.01.T01:intron 30.0%
! GTGCTTTTCTGTTTATGAAA+TGG + Chr8:70185162-70185181 MsG0880046174.01.T01:intron 30.0%
! TACAAGTTGAAGAAGATGTT+TGG + Chr8:70181929-70181948 MsG0880046174.01.T01:intron 30.0%
! TATTCTGCGATTTTTCTTCA+GGG + Chr8:70183950-70183969 MsG0880046174.01.T01:intron 30.0%
! TTATTCTGCGATTTTTCTTC+AGG + Chr8:70183949-70183968 MsG0880046174.01.T01:intron 30.0%
! TTTTCCTTCTCTTTAATCCT+TGG - Chr8:70184722-70184741 None:intergenic 30.0%
!! AACATGTCCATTTTTGTACT+TGG + Chr8:70185962-70185981 MsG0880046174.01.T01:three_prime_UTR 30.0%
!! AATGTGTTACTTGAATCTCT+TGG + Chr8:70185623-70185642 MsG0880046174.01.T01:intron 30.0%
!! ACATGTCCATTTTTGTACTT+GGG + Chr8:70185963-70185982 MsG0880046174.01.T01:three_prime_UTR 30.0%
!! AGAGTTGTTTAGAGTCATTT+TGG + Chr8:70182822-70182841 MsG0880046174.01.T01:intron 30.0%
!! TCTTGATAGTGAACAAACTA+GGG + Chr8:70184386-70184405 MsG0880046174.01.T01:intron 30.0%
!!! AAACTTCTGTGTTCTAGTTT+TGG - Chr8:70183867-70183886 None:intergenic 30.0%
!!! ACTATTTTTATGATTCTCCG+AGG + Chr8:70184507-70184526 MsG0880046174.01.T01:intron 30.0%
!!! AGTATTTTAGGTTTGAAGCA+GGG - Chr8:70183283-70183302 None:intergenic 30.0%
!!! ATACATCCAAGTTTTGTTTC+AGG - Chr8:70180410-70180429 MsG0880046175.01.T01:intron 30.0%
!!! CATGTGGTTTTGTAATTTGT+AGG - Chr8:70182557-70182576 None:intergenic 30.0%
!!! TTGAGTTTTAAGACATTTCC+TGG + Chr8:70181089-70181108 MsG0880046174.01.T01:intron 30.0%
AAAAATGGACATGTTACCCA+GGG - Chr8:70185957-70185976 None:intergenic 35.0%
AAAGGAATTAAGGGGAAGAA+AGG - Chr8:70185088-70185107 None:intergenic 35.0%
AAATCGTATGAACAAGGATG+GGG + Chr8:70183823-70183842 MsG0880046174.01.T01:CDS 35.0%
AACAGTTATCATTGCTTGGT+AGG + Chr8:70184124-70184143 MsG0880046174.01.T01:intron 35.0%
AACATGAAGGATATCCAATG+TGG + Chr8:70185764-70185783 MsG0880046174.01.T01:three_prime_UTR 35.0%
AAGATTATAAAAGCCTGGCA+TGG + Chr8:70182006-70182025 MsG0880046174.01.T01:intron 35.0%
AAGCAATGTACTACTGGAAT+TGG - Chr8:70186036-70186055 None:intergenic 35.0%
AATGTTACCTTCACTTGGTA+AGG + Chr8:70186072-70186091 MsG0880046174.01.T01:three_prime_UTR 35.0%
AATTCGACATGTGTCTTTAC+GGG + Chr8:70185921-70185940 MsG0880046174.01.T01:three_prime_UTR 35.0%
ACATCATGACATCAGATGAT+TGG + Chr8:70185705-70185724 MsG0880046174.01.T01:three_prime_UTR 35.0%
AGTTATTAACTGCAAGTGGA+TGG - Chr8:70182952-70182971 None:intergenic 35.0%
ATCAAATGTGCACTTCTGTA+GGG + Chr8:70185391-70185410 MsG0880046174.01.T01:intron 35.0%
ATCAACATGGGAAAGGATTA+AGG + Chr8:70181053-70181072 MsG0880046174.01.T01:intron 35.0%
ATGCAGCAATAAAACCACAT+TGG - Chr8:70185781-70185800 None:intergenic 35.0%
ATGTTACCTTCACTTGGTAA+GGG + Chr8:70186073-70186092 MsG0880046174.01.T01:three_prime_UTR 35.0%
CAAAACTTGGATGTATGGTA+TGG + Chr8:70180414-70180433 MsG0880046174.01.T01:exon 35.0%
CATGAAATGTTACCTTCACT+TGG + Chr8:70186067-70186086 MsG0880046174.01.T01:three_prime_UTR 35.0%
CCCAACTAGATATACACAAA+TGG - Chr8:70183723-70183742 None:intergenic 35.0%
CCCATTCCTAAAATCACTTT+GGG + Chr8:70180706-70180725 MsG0880046174.01.T01:CDS 35.0%
CTGTAACAGTTATCATTGCT+TGG + Chr8:70184120-70184139 MsG0880046174.01.T01:intron 35.0%
GAAAAGAAAAGAAAGAGGGT+TGG + Chr8:70180364-70180383 MsG0880046174.01.T01:five_prime_UTR 35.0%
GAAAGAATAATGTCTCTGGT+AGG - Chr8:70184191-70184210 None:intergenic 35.0%
GAAGGTAATTGCTAAGAAAG+AGG - Chr8:70181255-70181274 MsG0880046175.01.T01:CDS 35.0%
GAATACATAAGTAAAGGAGG+AGG - Chr8:70182173-70182192 None:intergenic 35.0%
GAATTCGACATGTGTCTTTA+CGG + Chr8:70185920-70185939 MsG0880046174.01.T01:three_prime_UTR 35.0%
GAGCTACGATTTAATGCAAT+AGG + Chr8:70185823-70185842 MsG0880046174.01.T01:three_prime_UTR 35.0%
GCAATGTTGGAAATTGAATC+AGG - Chr8:70181128-70181147 MsG0880046175.01.T01:CDS 35.0%
GCATTTGTAGAGAAACAAAG+TGG + Chr8:70181723-70181742 MsG0880046174.01.T01:intron 35.0%
GCTAGAAGATTATAAAAGCC+TGG + Chr8:70182001-70182020 MsG0880046174.01.T01:intron 35.0%
GGAGAAAAATCGTATGAACA+AGG + Chr8:70183817-70183836 MsG0880046174.01.T01:intron 35.0%
GGCGTTATACTTTGTCATTA+AGG + Chr8:70182027-70182046 MsG0880046174.01.T01:intron 35.0%
GGTTCCAAATAAGTAGACTA+TGG - Chr8:70184697-70184716 None:intergenic 35.0%
TAAGAAAATCAACATGGGCA+AGG - Chr8:70182095-70182114 None:intergenic 35.0%
TAAGGAAATCAACATGGGAA+AGG + Chr8:70181046-70181065 MsG0880046174.01.T01:intron 35.0%
TAATGCGAAGAAGAGAAGAA+GGG - Chr8:70180498-70180517 MsG0880046175.01.T01:intron 35.0%
TATATCCATGTTGGGATCAT+TGG + Chr8:70182640-70182659 MsG0880046174.01.T01:intron 35.0%
TATTATAACTTCCTCGTCCT+CGG - Chr8:70184527-70184546 None:intergenic 35.0%
TATTCCTTTCACCATTCTAG+TGG - Chr8:70180449-70180468 MsG0880046175.01.T01:intron 35.0%
TGGAATTCACATGAAACTTC+TGG - Chr8:70184922-70184941 None:intergenic 35.0%
TTAGATGGACCTCATAAGAA+CGG + Chr8:70183412-70183431 MsG0880046174.01.T01:intron 35.0%
TTCAACAACCCTCTCTTATT+GGG + Chr8:70184866-70184885 MsG0880046174.01.T01:intron 35.0%
TTGGGAAAGAATAATGTCTC+TGG - Chr8:70184195-70184214 None:intergenic 35.0%
TTGTAGGATTATGGCCTATT+TGG - Chr8:70182541-70182560 None:intergenic 35.0%
TTTCAACAACCCTCTCTTAT+TGG + Chr8:70184865-70184884 MsG0880046174.01.T01:intron 35.0%
TTTCTTAGTCCGAAAAGTCT+TGG - Chr8:70181545-70181564 None:intergenic 35.0%
TTTGTAGAGTAACAAAGTGG+TGG - Chr8:70181377-70181396 None:intergenic 35.0%
! AACAGACCCAAAGTGATTTT+AGG - Chr8:70180715-70180734 MsG0880046175.01.T01:intron 35.0%
! AAGCATTTTGTGGTACTACT+TGG + Chr8:70182324-70182343 MsG0880046174.01.T01:intron 35.0%
! AATAAAGTACTCCAACTACC+AGG + Chr8:70181459-70181478 MsG0880046174.01.T01:intron 35.0%
! AGTTTGTTCACTATCAAGAC+AGG - Chr8:70184385-70184404 None:intergenic 35.0%
! ATTCTGCGATTTTTCTTCAG+GGG + Chr8:70183951-70183970 MsG0880046174.01.T01:intron 35.0%
! GTTGATACGACTTTTCTTTG+AGG - Chr8:70184831-70184850 None:intergenic 35.0%
! TACTTATTTGGAACCATCCA+AGG + Chr8:70184702-70184721 MsG0880046174.01.T01:intron 35.0%
! TCACATGAAACTTCTGGAAA+TGG - Chr8:70184916-70184935 None:intergenic 35.0%
! TTCTTCTTTTGCTCTTCTGA+GGG - Chr8:70185235-70185254 None:intergenic 35.0%
! TTGTTTCTCCAGCATTGTAA+GGG + Chr8:70182917-70182936 MsG0880046174.01.T01:intron 35.0%
! TTTATCCCTCCAAGACTTTT+CGG + Chr8:70181533-70181552 MsG0880046174.01.T01:intron 35.0%
! TTTCTTCTTTTGCTCTTCTG+AGG - Chr8:70185236-70185255 None:intergenic 35.0%
! TTTGTTTCTCCAGCATTGTA+AGG + Chr8:70182916-70182935 MsG0880046174.01.T01:intron 35.0%
!! ACCCAAAGTGATTTTAGGAA+TGG - Chr8:70180710-70180729 MsG0880046175.01.T01:intron 35.0%
!! AGCTTTGAAATGTTGAGTCA+TGG + Chr8:70183166-70183185 MsG0880046174.01.T01:intron 35.0%
!! AGTGTTGGTCAAATTTGTGA+TGG + Chr8:70185801-70185820 MsG0880046174.01.T01:three_prime_UTR 35.0%
!! ATTTTGGAGAGTTCTCTCTT+TGG + Chr8:70182838-70182857 MsG0880046174.01.T01:intron 35.0%
!! CAAAGTGATTTTAGGAATGG+GGG - Chr8:70180707-70180726 MsG0880046175.01.T01:intron 35.0%
!! CCAAAGTGATTTTAGGAATG+GGG - Chr8:70180708-70180727 MsG0880046175.01.T01:intron 35.0%
!! CCCAAAGTGATTTTAGGAAT+GGG - Chr8:70180709-70180728 MsG0880046175.01.T01:intron 35.0%
!! CTTGATAGTGAACAAACTAG+GGG + Chr8:70184387-70184406 MsG0880046174.01.T01:intron 35.0%
!! GTACTGGTATAAGCATTTTG+TGG + Chr8:70182314-70182333 MsG0880046174.01.T01:intron 35.0%
!! GTCTTGATAGTGAACAAACT+AGG + Chr8:70184385-70184404 MsG0880046174.01.T01:intron 35.0%
!! GTTTTATTGCTGCATAGTGT+TGG + Chr8:70185786-70185805 MsG0880046174.01.T01:three_prime_UTR 35.0%
!! TACTTATTTTTCTCTGGTGG+TGG + Chr8:70184312-70184331 MsG0880046174.01.T01:intron 35.0%
!! TGATTTGGTAGTGATGAGAA+AGG - Chr8:70183102-70183121 None:intergenic 35.0%
!! TTGATAGTGAACAAACTAGG+GGG + Chr8:70184388-70184407 MsG0880046174.01.T01:intron 35.0%
!!! AGCTCAAGCAAGAGTATTTT+AGG - Chr8:70183295-70183314 None:intergenic 35.0%
!!! CTGTTGTCTCAGTTTTATTG+TGG + Chr8:70184755-70184774 MsG0880046174.01.T01:intron 35.0%
!!! GAGTATTTTAGGTTTGAAGC+AGG - Chr8:70183284-70183303 None:intergenic 35.0%
!!! GGAGTGACTTGCTTTTTTAT+AGG - Chr8:70182206-70182225 None:intergenic 35.0%
!!! TATTCCTTTTGCTGTTGAGT+TGG + Chr8:70184635-70184654 MsG0880046174.01.T01:intron 35.0%
AAATACCAACACCTGGTAGT+TGG - Chr8:70181473-70181492 None:intergenic 40.0%
AATGCGAAGAAGAGAAGAAG+GGG - Chr8:70180497-70180516 MsG0880046175.01.T01:intron 40.0%
ACAACCACTAGAATGGTGAA+AGG + Chr8:70180442-70180461 MsG0880046174.01.T01:CDS 40.0%
ACGACATGTCATATCCTAGA+AGG - Chr8:70185038-70185057 None:intergenic 40.0%
ACTTAATGCCCTTACAATGC+TGG - Chr8:70182928-70182947 None:intergenic 40.0%
ACTTCAGTGAGACCTAAGAA+TGG + Chr8:70184094-70184113 MsG0880046174.01.T01:intron 40.0%
ACTTTCTTACCATAAAGGGG+TGG - Chr8:70184942-70184961 None:intergenic 40.0%
ATACACGATGTCTCAACAGA+AGG - Chr8:70181273-70181292 None:intergenic 40.0%
ATACAGGGTCTAAACACATG+TGG - Chr8:70182573-70182592 None:intergenic 40.0%
ATACATGCACCGTTCTTATG+AGG - Chr8:70183424-70183443 None:intergenic 40.0%
ATGAACTCCTAACCAAAGCT+AGG - Chr8:70182872-70182891 None:intergenic 40.0%
ATGGCAACCGTACAAAGTTA+AGG - Chr8:70183643-70183662 None:intergenic 40.0%
ATGTCGAATTCCCGTAATTG+CGG - Chr8:70185911-70185930 None:intergenic 40.0%
ATGTGAATTCCACCCCTTTA+TGG + Chr8:70184930-70184949 MsG0880046174.01.T01:intron 40.0%
CAAAAATGGACATGTTACCC+AGG - Chr8:70185958-70185977 None:intergenic 40.0%
CAAACGTCTCAAAAGCAAGA+AGG + Chr8:70185430-70185449 MsG0880046174.01.T01:CDS 40.0%
CAGGGAGAAGATTATGCAAA+TGG + Chr8:70183061-70183080 MsG0880046174.01.T01:CDS 40.0%
CATCAAATGTGCACTTCTGT+AGG + Chr8:70185390-70185409 MsG0880046174.01.T01:intron 40.0%
CATGGGCAAGGATTTAAGAA+CGG - Chr8:70182083-70182102 None:intergenic 40.0%
CCATCCAAGGATTAAAGAGA+AGG + Chr8:70184715-70184734 MsG0880046174.01.T01:intron 40.0%
CCCCATTCCTAAAATCACTT+TGG + Chr8:70180705-70180724 MsG0880046174.01.T01:CDS 40.0%
CCTTCTCCCAAGTACAAAAA+TGG - Chr8:70185972-70185991 None:intergenic 40.0%
CCTTCTCTTTAATCCTTGGA+TGG - Chr8:70184718-70184737 None:intergenic 40.0%
CGACATGTCATATCCTAGAA+GGG - Chr8:70185037-70185056 None:intergenic 40.0%
CTGTTACAGAACCCATTCTT+AGG - Chr8:70184109-70184128 None:intergenic 40.0%
CTTCAGTGAGACCTAAGAAT+GGG + Chr8:70184095-70184114 MsG0880046174.01.T01:intron 40.0%
GAAGATGCTTGATATAAGGG+AGG - Chr8:70181150-70181169 MsG0880046175.01.T01:CDS 40.0%
GAATTGTATTGTTCCTTGGC+AGG + Chr8:70183796-70183815 MsG0880046174.01.T01:intron 40.0%
GGAATTCACCCAATAAGAGA+GGG - Chr8:70184877-70184896 None:intergenic 40.0%
GGTAATTGCTAAGAAAGAGG+TGG - Chr8:70181252-70181271 MsG0880046175.01.T01:CDS 40.0%
GTAATGCGAAGAAGAGAAGA+AGG - Chr8:70180499-70180518 MsG0880046175.01.T01:intron 40.0%
GTTAGGAGTTCATAGAACTC+TGG + Chr8:70182879-70182898 MsG0880046174.01.T01:intron 40.0%
GTTATAAAGACAGTAGGACG+CGG - Chr8:70184668-70184687 None:intergenic 40.0%
GTTGAAATACCAACACCTTG+TGG + Chr8:70181598-70181617 MsG0880046174.01.T01:intron 40.0%
TAGAGCCTGAATAGGGAAAT+AGG + Chr8:70182719-70182738 MsG0880046174.01.T01:intron 40.0%
TCAGTTGAAATACCAACACC+TGG - Chr8:70181614-70181595 None:intergenic 40.0%
TCGTTCCTATTTCCCTATTC+AGG - Chr8:70182727-70182746 None:intergenic 40.0%
TGATATAAGGGAGGCAATGT+TGG - Chr8:70181141-70181160 MsG0880046175.01.T01:CDS 40.0%
TGATTGTACAGTGAACACCA+AGG + Chr8:70182989-70183008 MsG0880046174.01.T01:intron 40.0%
TTAGTCCGAAAAGTCTTGGA+GGG - Chr8:70181541-70181560 None:intergenic 40.0%
TTCCCTATTCAGGCTCTATT+GGG - Chr8:70182717-70182736 None:intergenic 40.0%
TTTCCCTATTCAGGCTCTAT+TGG - Chr8:70182718-70182737 None:intergenic 40.0%
TTTCTTCAGGGGTAACATTG+AGG + Chr8:70183962-70183981 MsG0880046174.01.T01:intron 40.0%
TTTGTACTTGGGAGAAGGTT+GGG + Chr8:70185974-70185993 MsG0880046174.01.T01:three_prime_UTR 40.0%
! ACTGTGAATTTTGCCAGAAG+CGG + Chr8:70180838-70180857 MsG0880046174.01.T01:CDS 40.0%
! ATAAAGTACCTGCAACCACA+AGG - Chr8:70181616-70181635 None:intergenic 40.0%
! ATACGATTTTTCTCCTGCCA+AGG - Chr8:70183812-70183831 None:intergenic 40.0%
! ATCTGCAACTTGTTCTTCAG+CGG + Chr8:70181211-70181230 MsG0880046174.01.T01:intron 40.0%
! ATTTGATGGTTACAAGCCCT+TGG - Chr8:70185378-70185397 None:intergenic 40.0%
! CTACAGAAGTGCACATTTGA+TGG - Chr8:70185392-70185411 None:intergenic 40.0%
! GGAACAACAAAGTATCCTCT+CGG + Chr8:70180617-70180636 MsG0880046174.01.T01:CDS 40.0%
! TAAGAACGGTGGCTTCATTT+TGG - Chr8:70182069-70182088 None:intergenic 40.0%
! TCAATGTTGGAAAGGCACAT+TGG + Chr8:70183024-70183043 MsG0880046174.01.T01:CDS 40.0%
! TTGTATGCTGGCTGTAAGAT+TGG + Chr8:70183924-70183943 MsG0880046174.01.T01:intron 40.0%
! TTTTGTACTTGGGAGAAGGT+TGG + Chr8:70185973-70185992 MsG0880046174.01.T01:three_prime_UTR 40.0%
!! AAAGTGTTGAGAGTGAGTGT+CGG + Chr8:70184957-70184976 MsG0880046174.01.T01:intron 40.0%
!! CCATTTTTGTACTTGGGAGA+AGG + Chr8:70185969-70185988 MsG0880046174.01.T01:three_prime_UTR 40.0%
!! GGCATTTGCTTTTGATGGTA+TGG + Chr8:70186099-70186118 MsG0880046174.01.T01:three_prime_UTR 40.0%
!! GGTTTGGCATTTGCTTTTGA+TGG + Chr8:70186094-70186113 MsG0880046174.01.T01:three_prime_UTR 40.0%
AAGAAAGAGGGTTGGGATTG+TGG + Chr8:70180372-70180391 MsG0880046174.01.T01:five_prime_UTR 45.0%
AAGAGAAGGAAAATGGGGTG+TGG + Chr8:70184729-70184748 MsG0880046174.01.T01:intron 45.0%
AAGCCCAATAGAGCCTGAAT+AGG + Chr8:70182711-70182730 MsG0880046174.01.T01:intron 45.0%
AATTGCGGCTTAAGCTGACA+AGG - Chr8:70185896-70185915 None:intergenic 45.0%
ACAAAGTATAACGCCATGCC+AGG - Chr8:70182022-70182041 None:intergenic 45.0%
ACCTTCACTTGGTAAGGGTT+TGG + Chr8:70186078-70186097 MsG0880046174.01.T01:three_prime_UTR 45.0%
AGAGTCCAAGAATACCTCGA+CGG - Chr8:70181331-70181350 None:intergenic 45.0%
AGCCCAATAGAGCCTGAATA+GGG + Chr8:70182712-70182731 MsG0880046174.01.T01:intron 45.0%
AGCGGAGATAGATCGATGTT+CGG - Chr8:70180674-70180693 MsG0880046175.01.T01:intron 45.0%
AGTTAGAAGCTCGTCCCAAT+TGG + Chr8:70183580-70183599 MsG0880046174.01.T01:intron 45.0%
ATAGGGAAATAGGAACGACG+CGG + Chr8:70182729-70182748 MsG0880046174.01.T01:intron 45.0%
ATGCGAAGAAGAGAAGAAGG+GGG - Chr8:70180496-70180515 MsG0880046175.01.T01:intron 45.0%
ATTGCGGCTTAAGCTGACAA+GGG - Chr8:70185895-70185914 None:intergenic 45.0%
ATTGGCTAAGTGAAAGGGTC+AGG + Chr8:70183042-70183061 MsG0880046174.01.T01:CDS 45.0%
CAAAGAAGTTTGTACCGTCG+AGG + Chr8:70181314-70181333 MsG0880046174.01.T01:intron 45.0%
CATGCGGTTCAATGTTGGAA+AGG + Chr8:70183016-70183035 MsG0880046174.01.T01:CDS 45.0%
CCATACCAATGATCCCAACA+TGG - Chr8:70182648-70182667 None:intergenic 45.0%
CCATGTTGGGATCATTGGTA+TGG + Chr8:70182645-70182664 MsG0880046174.01.T01:intron 45.0%
CTTAGTCCGAAAAGTCTTGG+AGG - Chr8:70181542-70181561 None:intergenic 45.0%
CTTCCTCAGCTTCAGATTCT+GGG + Chr8:70180596-70180615 MsG0880046174.01.T01:CDS 45.0%
GAAGAGAGGAGAGGAAGAAA+GGG - Chr8:70180537-70180556 MsG0880046175.01.T01:intron 45.0%
GAGCGGTATTCTGTTAGGAT+GGG + Chr8:70182751-70182770 MsG0880046174.01.T01:intron 45.0%
GATGTTTGGGCTGACAAGTT+TGG + Chr8:70181943-70181962 MsG0880046174.01.T01:intron 45.0%
GCTGTAATTGAAGAGAGGAG+AGG - Chr8:70180546-70180565 MsG0880046175.01.T01:intron 45.0%
GGCTTCAACAACCACTAGAA+TGG + Chr8:70180435-70180454 MsG0880046174.01.T01:CDS 45.0%
GGGAATTCACCCAATAAGAG+AGG - Chr8:70184878-70184897 None:intergenic 45.0%
GGGACGAGCTTCTAACTTAT+AGG - Chr8:70183577-70183596 None:intergenic 45.0%
GGGGGTCAGAATGTCAATAA+AGG + Chr8:70180868-70180887 MsG0880046174.01.T01:intron 45.0%
GGGTAACATTGAGGATGCTT+TGG + Chr8:70183971-70183990 MsG0880046174.01.T01:intron 45.0%
GTCAGCTTAAGCCGCAATTA+CGG + Chr8:70185897-70185916 MsG0880046174.01.T01:three_prime_UTR 45.0%
GTGTTCACTGTACAATCAGC+AGG - Chr8:70182987-70183006 None:intergenic 45.0%
GTTAGAAGCTCGTCCCAATT+GGG + Chr8:70183581-70183600 MsG0880046174.01.T01:intron 45.0%
TAGATCGATGTTCGGCTTCT+TGG - Chr8:70180666-70180685 MsG0880046175.01.T01:intron 45.0%
TCAGCTTAAGCCGCAATTAC+GGG + Chr8:70185898-70185917 MsG0880046174.01.T01:three_prime_UTR 45.0%
TCCACCAACTCAACAGCAAA+AGG - Chr8:70184642-70184661 None:intergenic 45.0%
TGAAGAGAGGAGAGGAAGAA+AGG - Chr8:70180538-70180557 MsG0880046175.01.T01:intron 45.0%
TTATTGACATTCTGACCCCC+AGG - Chr8:70180868-70180887 MsG0880046175.01.T01:intron 45.0%
TTGGATAGAGAGCCTAGCTT+TGG + Chr8:70182857-70182876 MsG0880046174.01.T01:intron 45.0%
TTGGCTAAGTGAAAGGGTCA+GGG + Chr8:70183043-70183062 MsG0880046174.01.T01:CDS 45.0%
TTTATGATTCTCCGAGGACG+AGG + Chr8:70184513-70184532 MsG0880046174.01.T01:intron 45.0%
! AGGCACATTGGCTAAGTGAA+AGG + Chr8:70183036-70183055 MsG0880046174.01.T01:CDS 45.0%
! CTTTGTGGTTAGTCCCTTCT+AGG + Chr8:70185021-70185040 MsG0880046174.01.T01:intron 45.0%
! GCTAATAGGGACTTTTCCGT+AGG + Chr8:70183517-70183536 MsG0880046174.01.T01:intron 45.0%
! GGCACATTGGCTAAGTGAAA+GGG + Chr8:70183037-70183056 MsG0880046174.01.T01:CDS 45.0%
! TCTGCAACTTGTTCTTCAGC+GGG + Chr8:70181212-70181231 MsG0880046174.01.T01:intron 45.0%
! TTGTACCGTCGAGGTATTCT+TGG + Chr8:70181323-70181342 MsG0880046174.01.T01:intron 45.0%
!! TAGAGAGCCTAGCTTTGGTT+AGG + Chr8:70182862-70182881 MsG0880046174.01.T01:intron 45.0%
!! TTCTTTTGCTCTTCTGAGGG+AGG - Chr8:70185232-70185251 None:intergenic 45.0%
!!! ATTTTTCTCTGGTGGTGGTG+AGG + Chr8:70184317-70184336 MsG0880046174.01.T01:intron 45.0%
!!! TCCTTTTGCTGTTGAGTTGG+TGG + Chr8:70184638-70184657 MsG0880046174.01.T01:intron 45.0%
!! TATATATATATATATATTCA+AGG - Chr8:70180761-70180780 MsG0880046175.01.T01:intron 5.0%
AGAGGAAGAAAGGGCGAGAA+AGG - Chr8:70180528-70180547 MsG0880046175.01.T01:intron 50.0%
AGAGGGCAAGAATATCTCGC+TGG + Chr8:70181774-70181793 MsG0880046174.01.T01:intron 50.0%
ATTGAACCGCATGTCGACCT+TGG - Chr8:70183009-70183028 None:intergenic 50.0%
CTAGGGGGAAATTGCAGCTT+AGG + Chr8:70184403-70184422 MsG0880046174.01.T01:intron 50.0%
GAGACGTTTGTGCTCTCCTA+TGG - Chr8:70185420-70185439 None:intergenic 50.0%
GCCAAACCCTTACCAAGTGA+AGG - Chr8:70186082-70186101 None:intergenic 50.0%
GCTTCCTCAGCTTCAGATTC+TGG + Chr8:70180595-70180614 MsG0880046174.01.T01:CDS 50.0%
GGAGCGGTATTCTGTTAGGA+TGG + Chr8:70182750-70182769 MsG0880046174.01.T01:intron 50.0%
GGATGCTTTGGCAAAGCTTC+AGG + Chr8:70183983-70184002 MsG0880046174.01.T01:intron 50.0%
GGGCAAGGATTTAAGAACGG+TGG - Chr8:70182080-70182099 None:intergenic 50.0%
GTACTCCAACTACCAGGTGT+TGG + Chr8:70181465-70181484 MsG0880046174.01.T01:intron 50.0%
GTCGACATGCGGTTCAATGT+TGG + Chr8:70183011-70183030 MsG0880046174.01.T01:CDS 50.0%
GTGTAGCAGAGAGGTAACAG+AGG - Chr8:70182227-70182246 None:intergenic 50.0%
GTTGAGTCATGGCGTAGTAG+AGG + Chr8:70183177-70183196 MsG0880046174.01.T01:intron 50.0%
TACCAACACCTTGTGGTTGC+AGG + Chr8:70181605-70181624 MsG0880046174.01.T01:intron 50.0%
TACCTGCAACCACAAGGTGT+TGG - Chr8:70181610-70181629 None:intergenic 50.0%
TACGGGAAGTCAACAACCCT+GGG + Chr8:70185938-70185957 MsG0880046174.01.T01:three_prime_UTR 50.0%
TCACTCACTGTGTAGCAGAG+AGG - Chr8:70182236-70182255 None:intergenic 50.0%
TCAGGTAAAAGCTACGGTCC+AGG - Chr8:70181110-70181129 MsG0880046175.01.T01:intron 50.0%
TGAACACCAAGGTCGACATG+CGG + Chr8:70183000-70183019 MsG0880046174.01.T01:CDS 50.0%
TTACGGGAAGTCAACAACCC+TGG + Chr8:70185937-70185956 MsG0880046174.01.T01:three_prime_UTR 50.0%
! CGAGCGCTGTAATTGAAGAG+AGG - Chr8:70180551-70180570 MsG0880046175.01.T01:intron 50.0%
! GTGAATTTTGCCAGAAGCGG+AGG + Chr8:70180841-70180860 MsG0880046174.01.T01:CDS 50.0%
! GTTCCCAGAATCTGAAGCTG+AGG - Chr8:70180602-70180621 MsG0880046175.01.T01:intron 50.0%
!! AAGAAGGGGGTGTTGAAGAG+AGG - Chr8:70180483-70180502 MsG0880046175.01.T01:intron 50.0%
!! AATGGGGGCGTTGTAATCAG+CGG - Chr8:70180692-70180711 MsG0880046175.01.T01:intron 50.0%
!! TTTTGCTCTTCTGAGGGAGG+TGG - Chr8:70185229-70185248 None:intergenic 50.0%
ACGCGGAGCGGTATTCTGTT+AGG + Chr8:70182746-70182765 MsG0880046174.01.T01:intron 55.0%
AGCGCATCGAATTGCAGTGG+CGG - Chr8:70180578-70180597 MsG0880046175.01.T01:intron 55.0%
AGTATCCTCTCGGCTTTCGC+AGG + Chr8:70180627-70180646 MsG0880046174.01.T01:CDS 55.0%
CACTTCTGTAGGGCTGCCAT+AGG + Chr8:70185401-70185420 MsG0880046174.01.T01:intron 55.0%
CGGCTTCTTGGAGAAGCTCA+TGG - Chr8:70180654-70180673 MsG0880046175.01.T01:intron 55.0%
GAAATAGGAACGACGCGGAG+CGG + Chr8:70182734-70182753 MsG0880046174.01.T01:intron 55.0%
GAGGCAACTGCAGCCCAATT+GGG - Chr8:70183597-70183616 None:intergenic 55.0%
GGCTGACAAGTTTGGCAGCT+TGG + Chr8:70181951-70181970 MsG0880046174.01.T01:intron 55.0%
TGAGGCAACTGCAGCCCAAT+TGG - Chr8:70183598-70183617 None:intergenic 55.0%
! GGAAGCGCATCGAATTGCAG+TGG - Chr8:70180581-70180600 MsG0880046175.01.T01:intron 55.0%
!! TCTCTGGTGGTGGTGAGGTT+GGG + Chr8:70184322-70184341 MsG0880046174.01.T01:intron 55.0%
!! TTCTCTGGTGGTGGTGAGGT+TGG + Chr8:70184321-70184340 MsG0880046174.01.T01:intron 55.0%
ATGGACCTGCGAAAGCCGAG+AGG - Chr8:70180635-70180654 MsG0880046175.01.T01:intron 60.0%
GAGGGTTGGGATTGTGGACG+TGG + Chr8:70180378-70180397 MsG0880046174.01.T01:five_prime_UTR 60.0%
GCGCATCGAATTGCAGTGGC+GGG - Chr8:70180577-70180596 MsG0880046175.01.T01:intron 60.0%
TTGCCAGAAGCGGAGGACCT+GGG + Chr8:70180848-70180867 MsG0880046174.01.T01:CDS 60.0%
TTTGCCAGAAGCGGAGGACC+TGG + Chr8:70180847-70180866 MsG0880046174.01.T01:CDS 60.0%
! GCTCTTCTGAGGGAGGTGGT+GGG - Chr8:70185225-70185244 None:intergenic 60.0%
! TGCTCTTCTGAGGGAGGTGG+TGG - Chr8:70185226-70185245 None:intergenic 60.0%
TGCCAGAAGCGGAGGACCTG+GGG + Chr8:70180849-70180868 MsG0880046174.01.T01:CDS 65.0%
!! CTGGTGGTGGTGAGGTTGGG+AGG + Chr8:70184325-70184344 MsG0880046174.01.T01:intron 65.0%
ACCCCCAGGTCCTCCGCTTC+TGG - Chr8:70180854-70180873 MsG0880046175.01.T01:intron 70.0%
GCCAGAAGCGGAGGACCTGG+GGG + Chr8:70180850-70180869 MsG0880046174.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 70180353 70186154 70180353 ID=MsG0880046174.01;Name=MsG0880046174.01
Chr8 mRNA 70180353 70186154 70180353 ID=MsG0880046174.01.T01;Parent=MsG0880046174.01;Name=MsG0880046174.01.T01;_AED=0.48;_eAED=0.51;_QI=71|0.6|0.66|1|0|0|6|543|212
Chr8 exon 70180353 70180727 70180353 ID=MsG0880046174.01.T01:exon:27567;Parent=MsG0880046174.01.T01
Chr8 exon 70180830 70180871 70180830 ID=MsG0880046174.01.T01:exon:27568;Parent=MsG0880046174.01.T01
Chr8 exon 70183000 70183082 70183000 ID=MsG0880046174.01.T01:exon:27569;Parent=MsG0880046174.01.T01
Chr8 exon 70183818 70183936 70183818 ID=MsG0880046174.01.T01:exon:27570;Parent=MsG0880046174.01.T01
Chr8 exon 70185412 70185542 70185412 ID=MsG0880046174.01.T01:exon:27571;Parent=MsG0880046174.01.T01
Chr8 exon 70185652 70186154 70185652 ID=MsG0880046174.01.T01:exon:27572;Parent=MsG0880046174.01.T01
Chr8 five_prime_UTR 70180353 70180423 70180353 ID=MsG0880046174.01.T01:five_prime_utr;Parent=MsG0880046174.01.T01
Chr8 CDS 70180424 70180727 70180424 ID=MsG0880046174.01.T01:cds;Parent=MsG0880046174.01.T01
Chr8 CDS 70180830 70180871 70180830 ID=MsG0880046174.01.T01:cds;Parent=MsG0880046174.01.T01
Chr8 CDS 70183000 70183082 70183000 ID=MsG0880046174.01.T01:cds;Parent=MsG0880046174.01.T01
Chr8 CDS 70183818 70183936 70183818 ID=MsG0880046174.01.T01:cds;Parent=MsG0880046174.01.T01
Chr8 CDS 70185412 70185502 70185412 ID=MsG0880046174.01.T01:cds;Parent=MsG0880046174.01.T01
Chr8 three_prime_UTR 70185503 70185542 70185503 ID=MsG0880046174.01.T01:three_prime_utr;Parent=MsG0880046174.01.T01
Chr8 three_prime_UTR 70185652 70186154 70185652 ID=MsG0880046174.01.T01:three_prime_utr;Parent=MsG0880046174.01.T01
Gene Sequence

>MsG0880046174.01.T01

ATGTATGGTATGGCTTCAACAACCACTAGAATGGTGAAAGGAATATTGCTATTACACCTCTCTTCAACACCCCCTTCTTCTCTTCTTCGCATTACTCGCGACCTTTCTCGCCCTTTCTTCCTCTCCTCTCTTCAATTACAGCGCTCGCATCCCGCCACTGCAATTCGATGCGCTTCCTCAGCTTCAGATTCTGGGAACAACAAAGTATCCTCTCGGCTTTCGCAGGTCCATGAGCTTCTCCAAGAAGCCGAACATCGATCTATCTCCGCTGATTACAACGCCCCCATTCCTAAAATCACTTTGGATCATGTTACTGTGAATTTTGCCAGAAGCGGAGGACCTGGGGTGAACACCAAGGTCGACATGCGGTTCAATGTTGGAAAGGCACATTGGCTAAGTGAAAGGGTCAGGGAGAAGATTATGCAAATGGAGAAAAATCGTATGAACAAGGATGGGGAGCTTGTGATTTCTTCAACCAAAACTAGAACACAGAAGTTTGCCTCTTCCATTCTATTGAATTTTTGTATTTTTTTCATTGTATGCTGGCTGGCTGCCATAGGAGAGCACAAACGTCTCAAAAGCAAGAAGGTGCAATCAGATAAGAAAGCGCAAAGAAGAAGTAAAAGTAGTTGGGACTAA

Protein sequence

>MsG0880046174.01.T01

MYGMASTTTRMVKGILLLHLSSTPPSSLLRITRDLSRPFFLSSLQLQRSHPATAIRCASSASDSGNNKVSSRLSQVHELLQEAEHRSISADYNAPIPKITLDHVTVNFARSGGPGVNTKVDMRFNVGKAHWLSERVREKIMQMEKNRMNKDGELVISSTKTRTQKFASSILLNFCIFFIVCWLAAIGEHKRLKSKKVQSDKKAQRRSKSSWD*