Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004688.01.T01 | KEH43123.1 | 94.758 | 496 | 26 | 0 | 1 | 496 | 1 | 496 | 0 | 835 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004688.01.T01 | O65399 | 54.321 | 81 | 35 | 2 | 418 | 496 | 379 | 459 | 2.01E-20 | 97.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004688.01.T01 | A0A072VNX1 | 94.758 | 496 | 26 | 0 | 1 | 496 | 1 | 496 | 0.0 | 835 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048633.01 | MsG0180004688.01 | 0.826174 | 3.135027e-54 | 2.918140e-51 |
| MsG0080048652.01 | MsG0180004688.01 | 0.825469 | 4.609020e-54 | 4.204554e-51 |
| MsG0180000138.01 | MsG0180004688.01 | 0.806360 | 8.544294e-50 | 4.628215e-47 |
| MsG0180001656.01 | MsG0180004688.01 | -0.804734 | 1.873922e-49 | 9.736915e-47 |
| MsG0180002808.01 | MsG0180004688.01 | 0.813254 | 2.808725e-51 | 1.824972e-48 |
| MsG0180003620.01 | MsG0180004688.01 | 0.862621 | 4.451124e-64 | 1.311835e-60 |
| MsG0180004124.01 | MsG0180004688.01 | -0.815884 | 7.354878e-52 | 5.132861e-49 |
| MsG0180004125.01 | MsG0180004688.01 | -0.813581 | 2.380212e-51 | 1.560447e-48 |
| MsG0180004688.01 | MsG0280010617.01 | 0.816123 | 6.504609e-52 | 4.569497e-49 |
| MsG0180004688.01 | MsG0380011756.01 | 0.814461 | 1.523032e-51 | 1.022581e-48 |
| MsG0180004688.01 | MsG0380016031.01 | 0.861651 | 8.831245e-64 | 2.516492e-60 |
| MsG0180004688.01 | MsG0380017231.01 | 0.815113 | 1.091911e-51 | 7.460998e-49 |
| MsG0180004688.01 | MsG0380017380.01 | 0.876952 | 9.274652e-69 | 4.582241e-65 |
| MsG0180004688.01 | MsG0480021175.01 | 0.840162 | 1.026379e-57 | 1.449687e-54 |
| MsG0180004688.01 | MsG0480023195.01 | 0.802337 | 5.884911e-49 | 2.875447e-46 |
| MsG0180004688.01 | MsG0480023532.01 | 0.808117 | 3.625310e-50 | 2.055469e-47 |
| MsG0180004688.01 | MsG0480023575.01 | 0.818641 | 1.763109e-52 | 1.327094e-49 |
| MsG0180004688.01 | MsG0480023626.01 | 0.821462 | 3.986564e-53 | 3.245335e-50 |
| MsG0180004688.01 | MsG0580025117.01 | 0.815059 | 1.122538e-51 | 7.659142e-49 |
| MsG0180004688.01 | MsG0580025463.01 | 0.805886 | 1.075005e-49 | 5.753285e-47 |
| MsG0180004688.01 | MsG0580027517.01 | 0.808962 | 2.393388e-50 | 1.387428e-47 |
| MsG0180004688.01 | MsG0580028916.01 | 0.816387 | 5.676322e-52 | 4.016553e-49 |
| MsG0180004688.01 | MsG0580029623.01 | 0.801283 | 9.687212e-49 | 4.608238e-46 |
| MsG0180004688.01 | MsG0680030628.01 | 0.821480 | 3.949362e-53 | 3.216708e-50 |
| MsG0180004688.01 | MsG0680031062.01 | 0.806134 | 9.535278e-50 | 5.135506e-47 |
| MsG0180004688.01 | MsG0680031356.01 | 0.818188 | 2.233209e-52 | 1.660154e-49 |
| MsG0180004688.01 | MsG0680035349.01 | 0.802370 | 5.794568e-49 | 2.833677e-46 |
| MsG0180004688.01 | MsG0780039536.01 | 0.807806 | 4.223070e-50 | 2.374774e-47 |
| MsG0180004688.01 | MsG0780040460.01 | 0.809034 | 2.310149e-50 | 1.341763e-47 |
| MsG0180004688.01 | MsG0780040799.01 | 0.805808 | 1.116376e-49 | 5.962758e-47 |
| MsG0180004688.01 | MsG0780041100.01 | 0.827776 | 1.298003e-54 | 1.265408e-51 |
| MsG0180004688.01 | MsG0780041531.01 | -0.807580 | 4.716270e-50 | 2.636430e-47 |
| MsG0180004688.01 | MsG0780041820.01 | 0.842932 | 1.911857e-58 | 2.943450e-55 |
| MsG0180004688.01 | MsG0880042122.01 | 0.818352 | 2.050209e-52 | 1.531131e-49 |
| MsG0180004688.01 | MsG0880043948.01 | 0.805909 | 1.063190e-49 | 5.693332e-47 |
| MsG0180004688.01 | MsG0880046174.01 | -0.804064 | 2.584685e-49 | 1.319983e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004688.01.T01 | MTR_1g084820 | 94.758 | 496 | 26 | 0 | 1 | 496 | 1 | 496 | 0.0 | 835 |
| MsG0180004688.01.T01 | MTR_1g084820 | 94.758 | 496 | 26 | 0 | 1 | 496 | 1 | 496 | 0.0 | 833 |
| MsG0180004688.01.T01 | MTR_7g111600 | 63.102 | 187 | 48 | 8 | 318 | 496 | 64 | 237 | 2.90e-53 | 182 |
| MsG0180004688.01.T01 | MTR_7g111600 | 63.102 | 187 | 48 | 8 | 318 | 496 | 64 | 237 | 5.60e-53 | 180 |
| MsG0180004688.01.T01 | MTR_7g111600 | 63.102 | 187 | 48 | 8 | 318 | 496 | 64 | 237 | 1.65e-52 | 180 |
| MsG0180004688.01.T01 | MTR_3g048280 | 47.436 | 156 | 59 | 4 | 346 | 500 | 60 | 193 | 5.46e-36 | 133 |
| MsG0180004688.01.T01 | MTR_2g049670 | 66.234 | 77 | 26 | 0 | 420 | 496 | 158 | 234 | 6.12e-29 | 117 |
| MsG0180004688.01.T01 | MTR_5g015720 | 26.282 | 468 | 228 | 16 | 54 | 496 | 33 | 408 | 6.64e-28 | 115 |
| MsG0180004688.01.T01 | MTR_5g091650 | 57.647 | 85 | 35 | 1 | 413 | 496 | 101 | 185 | 9.20e-27 | 107 |
| MsG0180004688.01.T01 | MTR_5g091650 | 53.125 | 96 | 44 | 1 | 402 | 496 | 90 | 185 | 1.25e-26 | 109 |
| MsG0180004688.01.T01 | MTR_1g056640 | 60.976 | 82 | 30 | 2 | 416 | 495 | 402 | 483 | 1.66e-25 | 109 |
| MsG0180004688.01.T01 | MTR_8g089400 | 51.961 | 102 | 46 | 3 | 397 | 496 | 15 | 115 | 7.59e-25 | 100 |
| MsG0180004688.01.T01 | MTR_8g089400 | 51.961 | 102 | 46 | 3 | 397 | 496 | 35 | 135 | 8.93e-25 | 101 |
| MsG0180004688.01.T01 | MTR_8g085400 | 59.494 | 79 | 30 | 1 | 418 | 496 | 31 | 107 | 1.38e-24 | 99.0 |
| MsG0180004688.01.T01 | MTR_4g132280 | 52.874 | 87 | 39 | 2 | 412 | 496 | 374 | 460 | 7.63e-23 | 102 |
| MsG0180004688.01.T01 | MTR_8g088120 | 65.217 | 69 | 23 | 1 | 429 | 496 | 57 | 125 | 1.44e-22 | 96.7 |
| MsG0180004688.01.T01 | MTR_8g085440 | 50.000 | 82 | 40 | 1 | 416 | 496 | 28 | 109 | 2.31e-22 | 92.4 |
| MsG0180004688.01.T01 | MTR_3g082080 | 53.750 | 80 | 36 | 1 | 420 | 498 | 157 | 236 | 7.11e-22 | 95.1 |
| MsG0180004688.01.T01 | MTR_8g085420 | 48.780 | 82 | 41 | 1 | 416 | 496 | 28 | 109 | 7.27e-22 | 92.0 |
| MsG0180004688.01.T01 | MTR_8g085390 | 54.430 | 79 | 35 | 1 | 419 | 496 | 29 | 107 | 2.43e-21 | 92.0 |
| MsG0180004688.01.T01 | MTR_5g097420 | 51.724 | 87 | 40 | 2 | 412 | 496 | 22 | 108 | 1.03e-20 | 87.8 |
| MsG0180004688.01.T01 | MTR_5g085580 | 54.762 | 84 | 36 | 2 | 414 | 495 | 376 | 459 | 3.99e-20 | 93.6 |
| MsG0180004688.01.T01 | MTR_1g116870 | 48.780 | 82 | 41 | 1 | 416 | 496 | 272 | 353 | 4.09e-19 | 89.4 |
| MsG0180004688.01.T01 | MTR_1g022160 | 44.860 | 107 | 51 | 3 | 393 | 498 | 371 | 470 | 6.29e-19 | 89.7 |
| MsG0180004688.01.T01 | MTR_4g109490 | 54.430 | 79 | 34 | 2 | 419 | 496 | 23 | 100 | 1.02e-18 | 85.5 |
| MsG0180004688.01.T01 | MTR_6g088885 | 42.391 | 92 | 50 | 2 | 408 | 496 | 357 | 448 | 2.83e-18 | 88.2 |
| MsG0180004688.01.T01 | MTR_5g044530 | 52.055 | 73 | 34 | 1 | 417 | 488 | 19 | 91 | 3.43e-18 | 84.7 |
| MsG0180004688.01.T01 | MTR_1g022160 | 50.633 | 79 | 38 | 1 | 419 | 496 | 390 | 468 | 3.53e-18 | 87.4 |
| MsG0180004688.01.T01 | MTR_4g079530 | 46.067 | 89 | 46 | 2 | 410 | 496 | 27 | 115 | 3.70e-18 | 80.9 |
| MsG0180004688.01.T01 | MTR_1g022160 | 50.000 | 78 | 38 | 1 | 419 | 495 | 390 | 467 | 6.28e-18 | 86.7 |
| MsG0180004688.01.T01 | MTR_4g133735 | 48.235 | 85 | 42 | 2 | 414 | 496 | 22 | 106 | 7.53e-18 | 79.7 |
| MsG0180004688.01.T01 | MTR_4g083500 | 43.750 | 80 | 44 | 1 | 418 | 496 | 400 | 479 | 2.13e-17 | 85.5 |
| MsG0180004688.01.T01 | MTR_4g083070 | 52.857 | 70 | 32 | 1 | 420 | 488 | 21 | 90 | 5.06e-17 | 79.7 |
| MsG0180004688.01.T01 | MTR_3g083580 | 45.679 | 81 | 42 | 2 | 418 | 496 | 360 | 440 | 5.12e-17 | 84.0 |
| MsG0180004688.01.T01 | MTR_8g085720 | 49.367 | 79 | 38 | 2 | 420 | 496 | 364 | 442 | 5.17e-17 | 84.0 |
| MsG0180004688.01.T01 | MTR_4g133730 | 45.882 | 85 | 44 | 2 | 414 | 496 | 22 | 106 | 1.22e-16 | 76.3 |
| MsG0180004688.01.T01 | MTR_5g078200 | 48.148 | 81 | 40 | 2 | 418 | 496 | 358 | 438 | 1.42e-16 | 83.2 |
| MsG0180004688.01.T01 | MTR_5g078200 | 48.148 | 81 | 40 | 2 | 418 | 496 | 325 | 405 | 1.65e-16 | 82.8 |
| MsG0180004688.01.T01 | MTR_4g079530 | 51.899 | 79 | 36 | 2 | 420 | 496 | 37 | 115 | 2.02e-16 | 77.4 |
| MsG0180004688.01.T01 | MTR_4g069940 | 46.078 | 102 | 46 | 4 | 403 | 496 | 353 | 453 | 2.92e-16 | 81.6 |
| MsG0180004688.01.T01 | MTR_1g031900 | 48.148 | 81 | 40 | 2 | 418 | 496 | 359 | 439 | 4.63e-16 | 81.3 |
| MsG0180004688.01.T01 | MTR_2g072500 | 46.250 | 80 | 41 | 2 | 418 | 496 | 6 | 84 | 5.86e-16 | 73.6 |
| MsG0180004688.01.T01 | MTR_1g031900 | 48.148 | 81 | 40 | 2 | 418 | 496 | 359 | 439 | 6.56e-16 | 80.5 |
| MsG0180004688.01.T01 | MTR_3g065460 | 40.777 | 103 | 59 | 2 | 396 | 496 | 337 | 439 | 1.10e-15 | 79.7 |
| MsG0180004688.01.T01 | MTR_8g102340 | 43.750 | 80 | 43 | 2 | 419 | 496 | 333 | 412 | 3.13e-15 | 78.6 |
| MsG0180004688.01.T01 | MTR_3g116510 | 44.898 | 98 | 49 | 3 | 403 | 496 | 218 | 314 | 8.87e-15 | 75.9 |
| MsG0180004688.01.T01 | MTR_3g116510 | 44.898 | 98 | 49 | 3 | 403 | 496 | 352 | 448 | 1.02e-14 | 76.6 |
| MsG0180004688.01.T01 | MTR_7g026340 | 39.796 | 98 | 58 | 1 | 400 | 496 | 345 | 442 | 5.01e-14 | 74.7 |
| MsG0180004688.01.T01 | MTR_3g095050 | 37.113 | 97 | 57 | 4 | 403 | 497 | 356 | 450 | 7.44e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004688.01.T01 | AT1G09460 | 69.912 | 113 | 31 | 2 | 386 | 496 | 101 | 212 | 3.78e-39 | 145 |
| MsG0180004688.01.T01 | AT1G29380 | 68.354 | 79 | 24 | 1 | 420 | 497 | 148 | 226 | 3.40e-30 | 118 |
| MsG0180004688.01.T01 | AT1G29380 | 68.354 | 79 | 24 | 1 | 420 | 497 | 148 | 226 | 3.40e-30 | 118 |
| MsG0180004688.01.T01 | AT2G30933 | 44.615 | 130 | 40 | 2 | 368 | 496 | 61 | 159 | 9.39e-30 | 114 |
| MsG0180004688.01.T01 | AT2G30933 | 44.615 | 130 | 40 | 2 | 368 | 496 | 61 | 159 | 9.39e-30 | 114 |
| MsG0180004688.01.T01 | AT1G29380 | 68.354 | 79 | 24 | 1 | 420 | 497 | 148 | 226 | 1.06e-29 | 117 |
| MsG0180004688.01.T01 | AT1G29380 | 68.354 | 79 | 24 | 1 | 420 | 497 | 148 | 226 | 1.47e-29 | 118 |
| MsG0180004688.01.T01 | AT2G30933 | 44.615 | 130 | 40 | 2 | 368 | 496 | 61 | 159 | 3.28e-29 | 115 |
| MsG0180004688.01.T01 | AT2G05790 | 56.604 | 106 | 41 | 3 | 395 | 495 | 356 | 461 | 6.78e-27 | 114 |
| MsG0180004688.01.T01 | AT5G55180 | 54.348 | 92 | 40 | 2 | 413 | 502 | 365 | 456 | 1.12e-24 | 107 |
| MsG0180004688.01.T01 | AT5G55180 | 56.471 | 85 | 35 | 2 | 413 | 495 | 365 | 449 | 8.14e-23 | 101 |
| MsG0180004688.01.T01 | AT1G11820 | 54.217 | 83 | 36 | 2 | 418 | 498 | 379 | 461 | 1.81e-22 | 100 |
| MsG0180004688.01.T01 | AT4G05430 | 46.602 | 103 | 53 | 2 | 397 | 497 | 25 | 127 | 2.30e-22 | 93.2 |
| MsG0180004688.01.T01 | AT4G05430 | 46.465 | 99 | 51 | 2 | 400 | 496 | 3 | 101 | 4.47e-22 | 92.8 |
| MsG0180004688.01.T01 | AT4G05430 | 46.078 | 102 | 53 | 2 | 397 | 496 | 25 | 126 | 9.21e-22 | 92.8 |
| MsG0180004688.01.T01 | AT1G11820 | 54.321 | 81 | 35 | 2 | 418 | 496 | 379 | 459 | 2.05e-21 | 97.8 |
| MsG0180004688.01.T01 | AT4G26830 | 36.066 | 183 | 103 | 6 | 322 | 495 | 267 | 444 | 4.84e-21 | 96.3 |
| MsG0180004688.01.T01 | AT4G26830 | 36.066 | 183 | 103 | 6 | 322 | 495 | 271 | 448 | 7.58e-21 | 95.5 |
| MsG0180004688.01.T01 | AT5G35740 | 51.765 | 85 | 38 | 3 | 415 | 496 | 25 | 109 | 1.63e-20 | 87.4 |
| MsG0180004688.01.T01 | AT3G55430 | 44.828 | 87 | 47 | 1 | 412 | 497 | 358 | 444 | 1.84e-20 | 94.4 |
| MsG0180004688.01.T01 | AT1G79480 | 52.564 | 78 | 36 | 1 | 420 | 496 | 311 | 388 | 6.90e-20 | 92.0 |
| MsG0180004688.01.T01 | AT1G79480 | 52.564 | 78 | 36 | 1 | 420 | 496 | 310 | 387 | 6.90e-20 | 92.0 |
| MsG0180004688.01.T01 | AT5G67460 | 37.821 | 156 | 78 | 5 | 354 | 498 | 226 | 373 | 1.04e-19 | 91.3 |
| MsG0180004688.01.T01 | AT4G34480 | 49.367 | 79 | 39 | 1 | 419 | 496 | 252 | 330 | 1.84e-19 | 90.9 |
| MsG0180004688.01.T01 | AT1G18650 | 49.367 | 79 | 39 | 1 | 419 | 496 | 20 | 98 | 2.11e-19 | 86.3 |
| MsG0180004688.01.T01 | AT1G18650 | 49.367 | 79 | 39 | 1 | 419 | 496 | 20 | 98 | 2.34e-19 | 84.7 |
| MsG0180004688.01.T01 | AT4G34480 | 49.367 | 79 | 39 | 1 | 419 | 496 | 363 | 441 | 2.84e-19 | 91.3 |
| MsG0180004688.01.T01 | AT5G67460 | 37.662 | 154 | 77 | 5 | 354 | 496 | 226 | 371 | 5.77e-19 | 89.0 |
| MsG0180004688.01.T01 | AT1G69295 | 56.338 | 71 | 29 | 2 | 419 | 488 | 20 | 89 | 5.95e-19 | 86.3 |
| MsG0180004688.01.T01 | AT4G13600 | 50.000 | 78 | 38 | 1 | 420 | 496 | 61 | 138 | 7.05e-19 | 86.3 |
| MsG0180004688.01.T01 | AT1G69295 | 56.338 | 71 | 29 | 2 | 419 | 488 | 16 | 85 | 8.78e-19 | 85.5 |
| MsG0180004688.01.T01 | AT5G61130 | 49.367 | 79 | 39 | 1 | 419 | 496 | 20 | 98 | 2.34e-18 | 84.0 |
| MsG0180004688.01.T01 | AT2G42930 | 44.706 | 85 | 45 | 1 | 420 | 502 | 40 | 124 | 1.22e-17 | 79.7 |
| MsG0180004688.01.T01 | AT2G01630 | 48.148 | 81 | 40 | 2 | 418 | 496 | 358 | 438 | 1.41e-17 | 85.5 |
| MsG0180004688.01.T01 | AT1G26450 | 53.521 | 71 | 31 | 2 | 421 | 490 | 22 | 91 | 1.43e-17 | 81.6 |
| MsG0180004688.01.T01 | AT2G01630 | 47.561 | 82 | 41 | 2 | 418 | 497 | 358 | 439 | 1.50e-17 | 85.9 |
| MsG0180004688.01.T01 | AT3G58100 | 50.000 | 80 | 38 | 2 | 420 | 497 | 41 | 120 | 3.09e-17 | 80.1 |
| MsG0180004688.01.T01 | AT3G58100 | 50.000 | 80 | 38 | 2 | 420 | 497 | 117 | 196 | 4.83e-17 | 81.3 |
| MsG0180004688.01.T01 | AT1G66250 | 45.679 | 81 | 42 | 2 | 418 | 496 | 366 | 446 | 1.36e-16 | 82.8 |
| MsG0180004688.01.T01 | AT2G16230 | 45.570 | 79 | 42 | 1 | 419 | 496 | 365 | 443 | 2.14e-16 | 82.4 |
| MsG0180004688.01.T01 | AT5G08000 | 49.383 | 81 | 40 | 1 | 417 | 496 | 37 | 117 | 2.38e-16 | 78.6 |
| MsG0180004688.01.T01 | AT5G56590 | 48.101 | 79 | 39 | 2 | 420 | 496 | 369 | 447 | 4.43e-16 | 81.3 |
| MsG0180004688.01.T01 | AT5G24318 | 37.000 | 100 | 56 | 2 | 398 | 496 | 356 | 449 | 6.46e-16 | 80.5 |
| MsG0180004688.01.T01 | AT5G63225 | 42.353 | 85 | 48 | 1 | 413 | 496 | 18 | 102 | 7.14e-16 | 73.9 |
| MsG0180004688.01.T01 | AT2G04910 | 42.857 | 84 | 46 | 2 | 415 | 496 | 10 | 93 | 7.39e-16 | 73.9 |
| MsG0180004688.01.T01 | AT5G24318 | 37.000 | 100 | 56 | 2 | 398 | 496 | 217 | 310 | 1.01e-15 | 78.6 |
| MsG0180004688.01.T01 | AT5G24318 | 37.000 | 100 | 56 | 2 | 398 | 496 | 356 | 449 | 1.05e-15 | 79.7 |
| MsG0180004688.01.T01 | AT3G13560 | 49.367 | 79 | 38 | 2 | 420 | 496 | 362 | 440 | 1.13e-15 | 80.1 |
| MsG0180004688.01.T01 | AT3G13560 | 49.367 | 79 | 38 | 2 | 420 | 496 | 362 | 440 | 1.13e-15 | 80.1 |
| MsG0180004688.01.T01 | AT3G13560 | 49.367 | 79 | 38 | 2 | 420 | 496 | 362 | 440 | 1.13e-15 | 80.1 |
| MsG0180004688.01.T01 | AT3G13560 | 49.367 | 79 | 38 | 2 | 420 | 496 | 362 | 440 | 1.13e-15 | 80.1 |
| MsG0180004688.01.T01 | AT3G13560 | 49.367 | 79 | 38 | 2 | 420 | 496 | 362 | 440 | 1.13e-15 | 80.1 |
| MsG0180004688.01.T01 | AT4G29360 | 45.679 | 81 | 42 | 2 | 418 | 496 | 389 | 469 | 1.41e-15 | 79.7 |
| MsG0180004688.01.T01 | AT4G29360 | 45.679 | 81 | 42 | 2 | 418 | 496 | 399 | 479 | 1.47e-15 | 79.7 |
| MsG0180004688.01.T01 | AT5G08000 | 50.746 | 67 | 32 | 1 | 419 | 484 | 20 | 86 | 2.28e-15 | 75.1 |
| MsG0180004688.01.T01 | AT2G04910 | 43.678 | 87 | 47 | 2 | 415 | 499 | 10 | 96 | 2.57e-15 | 72.8 |
| MsG0180004688.01.T01 | AT1G66870 | 40.741 | 81 | 46 | 2 | 418 | 496 | 51 | 131 | 3.23e-15 | 73.2 |
| MsG0180004688.01.T01 | AT1G66870 | 40.741 | 81 | 46 | 2 | 418 | 496 | 24 | 104 | 4.06e-15 | 72.0 |
| MsG0180004688.01.T01 | AT3G23770 | 44.211 | 95 | 49 | 4 | 405 | 497 | 374 | 466 | 4.62e-15 | 77.8 |
| MsG0180004688.01.T01 | AT4G09090 | 48.485 | 66 | 33 | 1 | 420 | 484 | 31 | 96 | 6.08e-15 | 71.6 |
| MsG0180004688.01.T01 | AT4G09462 | 40.964 | 83 | 48 | 1 | 415 | 496 | 24 | 106 | 7.43e-15 | 71.2 |
| MsG0180004688.01.T01 | AT4G09465 | 39.759 | 83 | 49 | 1 | 415 | 496 | 26 | 108 | 1.34e-14 | 70.5 |
| MsG0180004688.01.T01 | AT1G66855 | 39.506 | 81 | 47 | 2 | 418 | 496 | 24 | 104 | 1.51e-14 | 70.5 |
| MsG0180004688.01.T01 | AT4G09467 | 39.759 | 83 | 49 | 1 | 415 | 496 | 26 | 108 | 1.67e-14 | 70.5 |
| MsG0180004688.01.T01 | AT4G09464 | 39.759 | 83 | 49 | 1 | 415 | 496 | 26 | 108 | 1.67e-14 | 70.5 |
| MsG0180004688.01.T01 | AT1G66852 | 38.750 | 80 | 48 | 1 | 418 | 496 | 24 | 103 | 2.15e-14 | 69.7 |
| MsG0180004688.01.T01 | AT1G78520 | 39.286 | 84 | 49 | 2 | 414 | 496 | 26 | 108 | 2.75e-14 | 69.7 |
| MsG0180004688.01.T01 | AT4G09466 | 39.759 | 83 | 49 | 1 | 415 | 496 | 26 | 108 | 4.55e-14 | 68.9 |
| MsG0180004688.01.T01 | AT5G63230 | 37.209 | 86 | 53 | 1 | 413 | 497 | 19 | 104 | 1.30e-13 | 67.8 |
| MsG0180004688.01.T01 | AT5G63250 | 38.889 | 90 | 50 | 3 | 412 | 496 | 33 | 122 | 1.48e-13 | 68.2 |
| MsG0180004688.01.T01 | AT5G63240 | 35.106 | 94 | 57 | 2 | 407 | 496 | 27 | 120 | 8.91e-13 | 65.9 |
| MsG0180004688.01.T01 | AT1G13830 | 42.466 | 73 | 41 | 1 | 417 | 488 | 32 | 104 | 1.21e-12 | 67.4 |
| MsG0180004688.01.T01 | AT4G16165 | 38.272 | 81 | 48 | 2 | 418 | 496 | 24 | 104 | 1.24e-12 | 64.7 |
| MsG0180004688.01.T01 | AT1G13830 | 42.857 | 70 | 39 | 1 | 420 | 488 | 21 | 90 | 1.93e-12 | 66.6 |
| MsG0180004688.01.T01 | AT5G53600 | 40.000 | 80 | 46 | 2 | 418 | 496 | 27 | 105 | 3.67e-12 | 63.5 |
| MsG0180004688.01.T01 | AT2G39640 | 36.957 | 92 | 51 | 2 | 406 | 496 | 351 | 436 | 4.56e-12 | 68.9 |
| MsG0180004688.01.T01 | AT2G39640 | 34.177 | 79 | 51 | 1 | 419 | 496 | 459 | 537 | 8.58e-12 | 67.8 |
| MsG0180004688.01.T01 | AT2G03505 | 34.940 | 83 | 53 | 1 | 419 | 500 | 20 | 102 | 4.87e-12 | 63.5 |
| MsG0180004688.01.T01 | AT2G43660 | 41.111 | 90 | 49 | 4 | 409 | 496 | 26 | 113 | 5.40e-12 | 63.5 |
| MsG0180004688.01.T01 | AT2G43660 | 41.111 | 90 | 49 | 4 | 409 | 496 | 25 | 112 | 6.78e-12 | 63.2 |
| MsG0180004688.01.T01 | AT2G03505 | 34.940 | 83 | 53 | 1 | 419 | 500 | 20 | 102 | 9.09e-12 | 63.9 |
| MsG0180004688.01.T01 | AT2G03505 | 34.940 | 83 | 53 | 1 | 419 | 500 | 20 | 102 | 9.09e-12 | 63.9 |
| MsG0180004688.01.T01 | AT2G03505 | 34.940 | 83 | 53 | 1 | 419 | 500 | 20 | 102 | 9.09e-12 | 63.9 |
| MsG0180004688.01.T01 | AT2G29735 | 40.000 | 90 | 51 | 2 | 413 | 499 | 24 | 113 | 1.37e-11 | 62.0 |
| MsG0180004688.01.T01 | AT5G53610 | 41.026 | 78 | 44 | 2 | 420 | 496 | 28 | 104 | 9.38e-11 | 59.3 |
Find 100 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTTCATGCAGGTTCTT+TGG | 0.248475 | 1:+81248397 | MsG0180004688.01.T01:intron |
| TAGATTACTTTCATTTATAA+AGG | 0.277901 | 1:+81248853 | MsG0180004688.01.T01:CDS |
| ATGAAGAAACTTTGCTCTGC+TGG | 0.376113 | 1:-81248466 | None:intergenic |
| GGAGGTGGATAAGATGTTAC+TGG | 0.377508 | 1:-81249505 | None:intergenic |
| ATGATAGAAGATAGCATTGA+TGG | 0.377602 | 1:+81248893 | MsG0180004688.01.T01:CDS |
| CCTCCAAAGTCGCAACTTGT+TGG | 0.380624 | 1:-81249784 | None:intergenic |
| GGTGTAATGGTTGGAGTTGT+TGG | 0.382964 | 1:-81249409 | None:intergenic |
| GGCATTGCAGCTGGATTTGT+AGG | 0.384777 | 1:-81249346 | None:intergenic |
| TGTGGAAGGAACTGCTATAA+TGG | 0.388341 | 1:-81249305 | None:intergenic |
| TCAGTGTGATTGATATATAC+AGG | 0.391997 | 1:-81248205 | None:intergenic |
| GCTCCAACAAGTTGCGACTT+TGG | 0.392668 | 1:+81249781 | MsG0180004688.01.T01:CDS |
| TTAAATGTTAAAATCTTACT+TGG | 0.392889 | 1:-81249832 | None:intergenic |
| TACACAATACTCTCTGATAA+TGG | 0.394136 | 1:+81248245 | MsG0180004688.01.T01:exon |
| ATAACTGGTGTTGGATTTGT+AGG | 0.394170 | 1:-81249262 | None:intergenic |
| GCATGGTTCTGCAAAGTAAC+AGG | 0.394899 | 1:-81249721 | None:intergenic |
| GAGCTTTCGTCACAGATCAT+AGG | 0.396108 | 1:+81248498 | MsG0180004688.01.T01:CDS |
| CGAGTTACTTCTATTGAACT+TGG | 0.401043 | 1:-81249034 | None:intergenic |
| TTGGATTATGCTTGTGGAAA+TGG | 0.401736 | 1:+81249655 | MsG0180004688.01.T01:CDS |
| CTTCAATGAAAGAACTCAAA+AGG | 0.413209 | 1:+81249137 | MsG0180004688.01.T01:CDS |
| GTAGTTGAAGGAACTGTTAC+TGG | 0.413784 | 1:-81249367 | None:intergenic |
| GAAGGAGCATTTGTGTTTGA+AGG | 0.413852 | 1:-81249568 | None:intergenic |
| GTTGGAGTTGTTGGAGGTAA+AGG | 0.413921 | 1:-81249400 | None:intergenic |
| TTGAAGGAGGTGGCTGTTGA+GGG | 0.417203 | 1:-81249552 | None:intergenic |
| CACAAATGCTCCTTCTGCTC+AGG | 0.420750 | 1:+81249576 | MsG0180004688.01.T01:CDS |
| ACCACTGGAACATTTCCTAA+TGG | 0.424925 | 1:-81249526 | None:intergenic |
| GGATAAGATGTTACTGGAGG+TGG | 0.426667 | 1:-81249499 | None:intergenic |
| ACTGTTACTGGCATTGCAGC+TGG | 0.430772 | 1:-81249355 | None:intergenic |
| TGATTGTTCTCAAATACAAC+AGG | 0.433295 | 1:+81249681 | MsG0180004688.01.T01:CDS |
| ACAACTCCTACAACAGTTCC+AGG | 0.436358 | 1:+81249454 | MsG0180004688.01.T01:CDS |
| ACATCTTATCCACCTCCATT+AGG | 0.436623 | 1:+81249511 | MsG0180004688.01.T01:CDS |
| CTTTCATGCAGGTTCTTTGG+TGG | 0.439102 | 1:+81248400 | MsG0180004688.01.T01:intron |
| GGAAATTGTGACAGGATTTG+TGG | 0.439347 | 1:-81249323 | None:intergenic |
| TTTCATGCAGGTTCTTTGGT+GGG | 0.448012 | 1:+81248401 | MsG0180004688.01.T01:intron |
| TTTGAAGGAGGTGGCTGTTG+AGG | 0.448619 | 1:-81249553 | None:intergenic |
| AGCTTCCCTTCAATCAGCAT+TGG | 0.454325 | 1:+81249636 | MsG0180004688.01.T01:CDS |
| AACTTCCTCAAGACTTGAAG+TGG | 0.458266 | 1:-81248803 | None:intergenic |
| AGTTGGTGTGTGGCGAAAAC+AGG | 0.475765 | 1:+81249604 | MsG0180004688.01.T01:CDS |
| AAGTCGCAACTTGTTGGAGC+TGG | 0.478203 | 1:-81249778 | None:intergenic |
| GAGGCAGAAAGAAGCTTCCT+TGG | 0.478234 | 1:-81248268 | None:intergenic |
| GGTGCACCTGGAACTGTTGT+AGG | 0.485248 | 1:-81249460 | None:intergenic |
| GTAGGGTAAACTGTGTTTGT+TGG | 0.486254 | 1:-81249244 | None:intergenic |
| GGAGGTGGATAAGATGTTAC+TGG | 0.487201 | 1:-81249484 | None:intergenic |
| GGCTGTTGAGGGTTTACCAC+TGG | 0.491135 | 1:-81249541 | None:intergenic |
| CATAATCCAATGCTGATTGA+AGG | 0.493090 | 1:-81249642 | None:intergenic |
| TTTGTAGGGGAAATTGTGAC+AGG | 0.494725 | 1:-81249331 | None:intergenic |
| TATCTAGAATATTTCTTCTG+TGG | 0.496929 | 1:-81249210 | None:intergenic |
| AGTGTCTCCTCTCTCATGAT+AGG | 0.500543 | 1:-81248429 | None:intergenic |
| GTATCTGAGGGTGTAATAAC+TGG | 0.502389 | 1:-81249277 | None:intergenic |
| GCATTGCAGCTGGATTTGTA+GGG | 0.503176 | 1:-81249345 | None:intergenic |
| GATGTTACTGGTGGTGCACC+TGG | 0.511282 | 1:-81249472 | None:intergenic |
| TTCAATGAAAGAACTCAAAA+GGG | 0.511868 | 1:+81249138 | MsG0180004688.01.T01:CDS |
| TCAGCATTGGATTATGCTTG+TGG | 0.514748 | 1:+81249649 | MsG0180004688.01.T01:CDS |
| GCATTTGTGTTTGAAGGAGG+TGG | 0.517825 | 1:-81249562 | None:intergenic |
| CTCTTGATTGTAAGAACCAC+AGG | 0.520516 | 1:-81249001 | None:intergenic |
| CATTTCCACTTCAAGTCTTG+AGG | 0.520651 | 1:+81248798 | MsG0180004688.01.T01:CDS |
| GGAGCATTTGTGTTTGAAGG+AGG | 0.521515 | 1:-81249565 | None:intergenic |
| GAAGACTGGTGCCGGTGTAA+TGG | 0.528319 | 1:-81249422 | None:intergenic |
| CAACTCTGTCCCTGAGCAGA+AGG | 0.531643 | 1:-81249586 | None:intergenic |
| TCCTTGCAAAGATGTTCCTG+TGG | 0.532621 | 1:+81248985 | MsG0180004688.01.T01:CDS |
| CCAACAAGTTGCGACTTTGG+AGG | 0.533263 | 1:+81249784 | MsG0180004688.01.T01:CDS |
| GGAACAGCAGGTGTAGTTGA+AGG | 0.536488 | 1:-81249379 | None:intergenic |
| GAAAGAACTCAAAAGGGAAG+AGG | 0.546037 | 1:+81249144 | MsG0180004688.01.T01:CDS |
| GGAACATTTCCTAATGGAGG+TGG | 0.552963 | 1:-81249520 | None:intergenic |
| GTTGGAGGTAAAGGAACAGC+AGG | 0.553488 | 1:-81249391 | None:intergenic |
| GAGGGTGTAATAACTGGTGT+TGG | 0.563477 | 1:-81249271 | None:intergenic |
| ATAATCCAATGCTGATTGAA+GGG | 0.564193 | 1:-81249641 | None:intergenic |
| TTTAACTCGGAAACTGCTGA+AGG | 0.564291 | 1:-81248605 | None:intergenic |
| ACTGTTGTAGGAGTTGTAGC+TGG | 0.566759 | 1:-81249448 | None:intergenic |
| TCTCTACTTAAACAAAAGCC+AGG | 0.575198 | 1:+81248559 | MsG0180004688.01.T01:CDS |
| TAACTGGTGTTGGATTTGTA+GGG | 0.580532 | 1:-81249261 | None:intergenic |
| CTTCTGCTCAGGGACAGAGT+TGG | 0.581714 | 1:+81249587 | MsG0180004688.01.T01:CDS |
| TTAAGAGCATGCATAATCAA+AGG | 0.588835 | 1:-81248716 | None:intergenic |
| TATAATGGTTGGAGTATCTG+AGG | 0.591925 | 1:-81249290 | None:intergenic |
| GAAGGAACTGCTATAATGGT+TGG | 0.591976 | 1:-81249301 | None:intergenic |
| AAGATCTCTCTTCTAGACAA+AGG | 0.594620 | 1:-81249178 | None:intergenic |
| ATACTCTCTGATAATGGCCA+AGG | 0.605015 | 1:+81248251 | MsG0180004688.01.T01:exon |
| GTAATGGTTGGAGTTGTTGG+AGG | 0.606112 | 1:-81249406 | None:intergenic |
| ATCATGAGAGAGGAGACACT+TGG | 0.607322 | 1:+81248432 | MsG0180004688.01.T01:CDS |
| GTTGTAGCTGGATTGAAGAC+TGG | 0.620005 | 1:-81249436 | None:intergenic |
| ACAAATGCTCCTTCTGCTCA+GGG | 0.620260 | 1:+81249577 | MsG0180004688.01.T01:CDS |
| ATTGTGACAGGATTTGTGGA+AGG | 0.620979 | 1:-81249319 | None:intergenic |
| TTAACTCGGAAACTGCTGAA+GGG | 0.622484 | 1:-81248604 | None:intergenic |
| AGAGAGAAGAGAGAAACAAG+AGG | 0.623621 | 1:-81248287 | None:intergenic |
| GCTGGATTGAAGACTGGTGC+CGG | 0.624496 | 1:-81249430 | None:intergenic |
| AACAACTCCAACCATTACAC+CGG | 0.624559 | 1:+81249411 | MsG0180004688.01.T01:CDS |
| ACTGGTGCCGGTGTAATGGT+TGG | 0.625957 | 1:-81249418 | None:intergenic |
| CAGTGATCTTCACATAAGCA+AGG | 0.629071 | 1:+81248757 | MsG0180004688.01.T01:CDS |
| ACCACAGGAACATCTTTGCA+AGG | 0.631919 | 1:-81248986 | None:intergenic |
| CATTGCAGCTGGATTTGTAG+GGG | 0.635434 | 1:-81249344 | None:intergenic |
| GAACTCAAAAGGGAAGAGGA+AGG | 0.639773 | 1:+81249148 | MsG0180004688.01.T01:CDS |
| TGTTGAAGGCAAAAGAAGCA+TGG | 0.645483 | 1:-81249738 | None:intergenic |
| TCCATTAGGAAATGTTCCAG+TGG | 0.658091 | 1:+81249525 | MsG0180004688.01.T01:CDS |
| ACTGGAACATTTCCTAATGG+AGG | 0.658231 | 1:-81249523 | None:intergenic |
| GCTGATTGAAGGGAAGCTTG+TGG | 0.661755 | 1:-81249631 | None:intergenic |
| CAGAAGCAGCAAGATTAGCG+CGG | 0.682382 | 1:-81248958 | None:intergenic |
| ATAATGGTTGGAGTATCTGA+GGG | 0.698374 | 1:-81249289 | None:intergenic |
| TCAGGGACAGAGTTGGTGTG+TGG | 0.715688 | 1:+81249594 | MsG0180004688.01.T01:CDS |
| GGTGGATAAGATGTTACTGG+AGG | 0.717889 | 1:-81249502 | None:intergenic |
| GATTGTTCTCAAATACAACA+GGG | 0.719905 | 1:+81249682 | MsG0180004688.01.T01:CDS |
| GGTGGATAAGATGTTACTGG+TGG | 0.740803 | 1:-81249481 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGATTACTTTCATTTATAA+AGG | + | Chr1:81248853-81248872 | MsG0180004688.01.T01:CDS | 15.0% |
| !! | TTAAATGTTAAAATCTTACT+TGG | - | Chr1:81249835-81249854 | None:intergenic | 15.0% |
| !!! | ATGTTTTTGATGTTTAAATG+TGG | - | Chr1:81248653-81248672 | None:intergenic | 20.0% |
| !!! | TCTTTTTGCTTCTAAATATT+TGG | - | Chr1:81249077-81249096 | None:intergenic | 20.0% |
| ! | ATATTATTTCACTTTCATGC+AGG | + | Chr1:81248389-81248408 | MsG0180004688.01.T01:intron | 25.0% |
| ! | TTCAATGAAAGAACTCAAAA+GGG | + | Chr1:81249138-81249157 | MsG0180004688.01.T01:CDS | 25.0% |
| !! | TATCTAGAATATTTCTTCTG+TGG | - | Chr1:81249213-81249232 | None:intergenic | 25.0% |
| !!! | AAGTAATGAATTTTTCAACC+TGG | - | Chr1:81248580-81248599 | None:intergenic | 25.0% |
| AAGCAAGGAAGTAAAAATCT+CGG | + | Chr1:81248772-81248791 | MsG0180004688.01.T01:CDS | 30.0% | |
| CTTCAATGAAAGAACTCAAA+AGG | + | Chr1:81249137-81249156 | MsG0180004688.01.T01:CDS | 30.0% | |
| GATTGTTCTCAAATACAACA+GGG | + | Chr1:81249682-81249701 | MsG0180004688.01.T01:CDS | 30.0% | |
| TACACAATACTCTCTGATAA+TGG | + | Chr1:81248245-81248264 | MsG0180004688.01.T01:exon | 30.0% | |
| TCAGTGTGATTGATATATAC+AGG | - | Chr1:81248208-81248227 | None:intergenic | 30.0% | |
| TGATTGTTCTCAAATACAAC+AGG | + | Chr1:81249681-81249700 | MsG0180004688.01.T01:CDS | 30.0% | |
| ! | ATAATCCAATGCTGATTGAA+GGG | - | Chr1:81249644-81249663 | None:intergenic | 30.0% |
| ! | ATGATAGAAGATAGCATTGA+TGG | + | Chr1:81248893-81248912 | MsG0180004688.01.T01:CDS | 30.0% |
| ! | TTAAGAGCATGCATAATCAA+AGG | - | Chr1:81248719-81248738 | None:intergenic | 30.0% |
| !! | CTTTTGATAGTAACTGTTGA+AGG | - | Chr1:81249755-81249774 | None:intergenic | 30.0% |
| AAAAACATCATTGCTAGCTG+TGG | + | Chr1:81248665-81248684 | MsG0180004688.01.T01:CDS | 35.0% | |
| AAGATCTCTCTTCTAGACAA+AGG | - | Chr1:81249181-81249200 | None:intergenic | 35.0% | |
| CGAGTTACTTCTATTGAACT+TGG | - | Chr1:81249037-81249056 | None:intergenic | 35.0% | |
| TCTCTACTTAAACAAAAGCC+AGG | + | Chr1:81248559-81248578 | MsG0180004688.01.T01:CDS | 35.0% | |
| TTGGATTATGCTTGTGGAAA+TGG | + | Chr1:81249655-81249674 | MsG0180004688.01.T01:CDS | 35.0% | |
| ! | ATAACTGGTGTTGGATTTGT+AGG | - | Chr1:81249265-81249284 | None:intergenic | 35.0% |
| ! | ATAATGGTTGGAGTATCTGA+GGG | - | Chr1:81249292-81249311 | None:intergenic | 35.0% |
| ! | CATAATCCAATGCTGATTGA+AGG | - | Chr1:81249645-81249664 | None:intergenic | 35.0% |
| ! | TAACTGGTGTTGGATTTGTA+GGG | - | Chr1:81249264-81249283 | None:intergenic | 35.0% |
| ! | TATAATGGTTGGAGTATCTG+AGG | - | Chr1:81249293-81249312 | None:intergenic | 35.0% |
| !! | CACTAGTTGAGCTTTTAACT+CGG | - | Chr1:81248621-81248640 | None:intergenic | 35.0% |
| AACAACTCCAACCATTACAC+CGG | + | Chr1:81249411-81249430 | MsG0180004688.01.T01:CDS | 40.0% | |
| AACTTCCTCAAGACTTGAAG+TGG | - | Chr1:81248806-81248825 | None:intergenic | 40.0% | |
| ACATCTTATCCACCTCCATT+AGG | + | Chr1:81249511-81249530 | MsG0180004688.01.T01:CDS | 40.0% | |
| ACCACTGGAACATTTCCTAA+TGG | - | Chr1:81249529-81249548 | None:intergenic | 40.0% | |
| ACTGGAACATTTCCTAATGG+AGG | - | Chr1:81249526-81249545 | None:intergenic | 40.0% | |
| AGAGAGAAGAGAGAAACAAG+AGG | - | Chr1:81248290-81248309 | None:intergenic | 40.0% | |
| ATGAAGAAACTTTGCTCTGC+TGG | - | Chr1:81248469-81248488 | None:intergenic | 40.0% | |
| ATTGTGACAGGATTTGTGGA+AGG | - | Chr1:81249322-81249341 | None:intergenic | 40.0% | |
| CAGTGATCTTCACATAAGCA+AGG | + | Chr1:81248757-81248776 | MsG0180004688.01.T01:CDS | 40.0% | |
| CATTTCCACTTCAAGTCTTG+AGG | + | Chr1:81248798-81248817 | MsG0180004688.01.T01:CDS | 40.0% | |
| CTCTTGATTGTAAGAACCAC+AGG | - | Chr1:81249004-81249023 | None:intergenic | 40.0% | |
| GAAAGAACTCAAAAGGGAAG+AGG | + | Chr1:81249144-81249163 | MsG0180004688.01.T01:CDS | 40.0% | |
| GAAGGAACTGCTATAATGGT+TGG | - | Chr1:81249304-81249323 | None:intergenic | 40.0% | |
| GGAAATTGTGACAGGATTTG+TGG | - | Chr1:81249326-81249345 | None:intergenic | 40.0% | |
| GTAGGGTAAACTGTGTTTGT+TGG | - | Chr1:81249247-81249266 | None:intergenic | 40.0% | |
| GTAGTTGAAGGAACTGTTAC+TGG | - | Chr1:81249370-81249389 | None:intergenic | 40.0% | |
| TCACTTTCATGCAGGTTCTT+TGG | + | Chr1:81248397-81248416 | MsG0180004688.01.T01:intron | 40.0% | |
| TCCATTAGGAAATGTTCCAG+TGG | + | Chr1:81249525-81249544 | MsG0180004688.01.T01:CDS | 40.0% | |
| TGTGGAAGGAACTGCTATAA+TGG | - | Chr1:81249308-81249327 | None:intergenic | 40.0% | |
| TGTTGAAGGCAAAAGAAGCA+TGG | - | Chr1:81249741-81249760 | None:intergenic | 40.0% | |
| TTAACTCGGAAACTGCTGAA+GGG | - | Chr1:81248607-81248626 | None:intergenic | 40.0% | |
| TTTAACTCGGAAACTGCTGA+AGG | - | Chr1:81248608-81248627 | None:intergenic | 40.0% | |
| TTTCATGCAGGTTCTTTGGT+GGG | + | Chr1:81248401-81248420 | MsG0180004688.01.T01:intron | 40.0% | |
| TTTGTAGGGGAAATTGTGAC+AGG | - | Chr1:81249334-81249353 | None:intergenic | 40.0% | |
| ! | GGTTTTTCCTATCATGAGAG+AGG | + | Chr1:81248422-81248441 | MsG0180004688.01.T01:CDS | 40.0% |
| ! | GTATCTGAGGGTGTAATAAC+TGG | - | Chr1:81249280-81249299 | None:intergenic | 40.0% |
| ! | TCAGCATTGGATTATGCTTG+TGG | + | Chr1:81249649-81249668 | MsG0180004688.01.T01:CDS | 40.0% |
| !! | ATACTCTCTGATAATGGCCA+AGG | + | Chr1:81248251-81248270 | MsG0180004688.01.T01:exon | 40.0% |
| !! | GAAGGAGCATTTGTGTTTGA+AGG | - | Chr1:81249571-81249590 | None:intergenic | 40.0% |
| ACAAATGCTCCTTCTGCTCA+GGG | + | Chr1:81249577-81249596 | MsG0180004688.01.T01:CDS | 45.0% | |
| ACAACTCCTACAACAGTTCC+AGG | + | Chr1:81249454-81249473 | MsG0180004688.01.T01:CDS | 45.0% | |
| ACCACAGGAACATCTTTGCA+AGG | - | Chr1:81248989-81249008 | None:intergenic | 45.0% | |
| ACTGTTGTAGGAGTTGTAGC+TGG | - | Chr1:81249451-81249470 | None:intergenic | 45.0% | |
| AGCTTCCCTTCAATCAGCAT+TGG | + | Chr1:81249636-81249655 | MsG0180004688.01.T01:CDS | 45.0% | |
| AGTGTCTCCTCTCTCATGAT+AGG | - | Chr1:81248432-81248451 | None:intergenic | 45.0% | |
| ATCATGAGAGAGGAGACACT+TGG | + | Chr1:81248432-81248451 | MsG0180004688.01.T01:CDS | 45.0% | |
| CATTGCAGCTGGATTTGTAG+GGG | - | Chr1:81249347-81249366 | None:intergenic | 45.0% | |
| CTTTCATGCAGGTTCTTTGG+TGG | + | Chr1:81248400-81248419 | MsG0180004688.01.T01:intron | 45.0% | |
| GAACTCAAAAGGGAAGAGGA+AGG | + | Chr1:81249148-81249167 | MsG0180004688.01.T01:CDS | 45.0% | |
| GAGCTTTCGTCACAGATCAT+AGG | + | Chr1:81248498-81248517 | MsG0180004688.01.T01:CDS | 45.0% | |
| GCATTGCAGCTGGATTTGTA+GGG | - | Chr1:81249348-81249367 | None:intergenic | 45.0% | |
| GCATTTGTGTTTGAAGGAGG+TGG | - | Chr1:81249565-81249584 | None:intergenic | 45.0% | |
| GGAACATTTCCTAATGGAGG+TGG | - | Chr1:81249523-81249542 | None:intergenic | 45.0% | |
| GGAGGTGGATAAGATGTTAC+TGG | - | Chr1:81249487-81249506 | None:intergenic | 45.0% | |
| GGATAAGATGTTACTGGAGG+TGG | - | Chr1:81249502-81249521 | None:intergenic | 45.0% | |
| GGTGGATAAGATGTTACTGG+AGG | - | Chr1:81249484-81249503 | None:intergenic | 45.0% | |
| GGTGGATAAGATGTTACTGG+TGG | - | Chr1:81249484-81249503 | None:intergenic | 45.0% | |
| GGTGTAATGGTTGGAGTTGT+TGG | - | Chr1:81249412-81249431 | None:intergenic | 45.0% | |
| GTAATGGTTGGAGTTGTTGG+AGG | - | Chr1:81249409-81249428 | None:intergenic | 45.0% | |
| GTTGGAGTTGTTGGAGGTAA+AGG | - | Chr1:81249403-81249422 | None:intergenic | 45.0% | |
| GTTGTAGCTGGATTGAAGAC+TGG | - | Chr1:81249439-81249458 | None:intergenic | 45.0% | |
| TCCTTGCAAAGATGTTCCTG+TGG | + | Chr1:81248985-81249004 | MsG0180004688.01.T01:CDS | 45.0% | |
| ! | GAGGGTGTAATAACTGGTGT+TGG | - | Chr1:81249274-81249293 | None:intergenic | 45.0% |
| ! | GCATGGTTCTGCAAAGTAAC+AGG | - | Chr1:81249724-81249743 | None:intergenic | 45.0% |
| ! | GGAGCATTTGTGTTTGAAGG+AGG | - | Chr1:81249568-81249587 | None:intergenic | 45.0% |
| ACTGTTACTGGCATTGCAGC+TGG | - | Chr1:81249358-81249377 | None:intergenic | 50.0% | |
| CACAAATGCTCCTTCTGCTC+AGG | + | Chr1:81249576-81249595 | MsG0180004688.01.T01:CDS | 50.0% | |
| CAGAAGCAGCAAGATTAGCG+CGG | - | Chr1:81248961-81248980 | None:intergenic | 50.0% | |
| CCAACAAGTTGCGACTTTGG+AGG | + | Chr1:81249784-81249803 | MsG0180004688.01.T01:CDS | 50.0% | |
| CCTCCAAAGTCGCAACTTGT+TGG | - | Chr1:81249787-81249806 | None:intergenic | 50.0% | |
| GAGGCAGAAAGAAGCTTCCT+TGG | - | Chr1:81248271-81248290 | None:intergenic | 50.0% | |
| GCTCCAACAAGTTGCGACTT+TGG | + | Chr1:81249781-81249800 | MsG0180004688.01.T01:CDS | 50.0% | |
| GCTGATTGAAGGGAAGCTTG+TGG | - | Chr1:81249634-81249653 | None:intergenic | 50.0% | |
| GGAACAGCAGGTGTAGTTGA+AGG | - | Chr1:81249382-81249401 | None:intergenic | 50.0% | |
| GGCATTGCAGCTGGATTTGT+AGG | - | Chr1:81249349-81249368 | None:intergenic | 50.0% | |
| GTTGGAGGTAAAGGAACAGC+AGG | - | Chr1:81249394-81249413 | None:intergenic | 50.0% | |
| TTGAAGGAGGTGGCTGTTGA+GGG | - | Chr1:81249555-81249574 | None:intergenic | 50.0% | |
| TTTGAAGGAGGTGGCTGTTG+AGG | - | Chr1:81249556-81249575 | None:intergenic | 50.0% | |
| ! | AGTTGGTGTGTGGCGAAAAC+AGG | + | Chr1:81249604-81249623 | MsG0180004688.01.T01:CDS | 50.0% |
| !! | AAGTCGCAACTTGTTGGAGC+TGG | - | Chr1:81249781-81249800 | None:intergenic | 50.0% |
| CAACTCTGTCCCTGAGCAGA+AGG | - | Chr1:81249589-81249608 | None:intergenic | 55.0% | |
| CTTCTGCTCAGGGACAGAGT+TGG | + | Chr1:81249587-81249606 | MsG0180004688.01.T01:CDS | 55.0% | |
| GCTGGATTGAAGACTGGTGC+CGG | - | Chr1:81249433-81249452 | None:intergenic | 55.0% | |
| GGCTGTTGAGGGTTTACCAC+TGG | - | Chr1:81249544-81249563 | None:intergenic | 55.0% | |
| GGTGCACCTGGAACTGTTGT+AGG | - | Chr1:81249463-81249482 | None:intergenic | 55.0% | |
| ! | GATGTTACTGGTGGTGCACC+TGG | - | Chr1:81249475-81249494 | None:intergenic | 55.0% |
| !! | ACTGGTGCCGGTGTAATGGT+TGG | - | Chr1:81249421-81249440 | None:intergenic | 55.0% |
| !! | GAAGACTGGTGCCGGTGTAA+TGG | - | Chr1:81249425-81249444 | None:intergenic | 55.0% |
| !! | TCAGGGACAGAGTTGGTGTG+TGG | + | Chr1:81249594-81249613 | MsG0180004688.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 81248199 | 81249858 | 81248199 | ID=MsG0180004688.01;Name=MsG0180004688.01 |
| Chr1 | mRNA | 81248199 | 81249858 | 81248199 | ID=MsG0180004688.01.T01;Parent=MsG0180004688.01;Name=MsG0180004688.01.T01;_AED=0.28;_eAED=0.28;_QI=65|1|0.5|1|1|1|2|0|502 |
| Chr1 | exon | 81248199 | 81248324 | 81248199 | ID=MsG0180004688.01.T01:exon:34359;Parent=MsG0180004688.01.T01 |
| Chr1 | exon | 81248411 | 81249858 | 81248411 | ID=MsG0180004688.01.T01:exon:34360;Parent=MsG0180004688.01.T01 |
| Chr1 | five_prime_UTR | 81248199 | 81248263 | 81248199 | ID=MsG0180004688.01.T01:five_prime_utr;Parent=MsG0180004688.01.T01 |
| Chr1 | CDS | 81248264 | 81248324 | 81248264 | ID=MsG0180004688.01.T01:cds;Parent=MsG0180004688.01.T01 |
| Chr1 | CDS | 81248411 | 81249858 | 81248411 | ID=MsG0180004688.01.T01:cds;Parent=MsG0180004688.01.T01 |
| Gene Sequence |
| Protein sequence |