AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037492.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037492.01.T01 MTR_7g033570 94.960 496 25 0 1 496 1 496 0.0 980
MsG0780037492.01.T01 MTR_7g033580 85.081 496 74 0 1 496 1 496 0.0 892
MsG0780037492.01.T01 MTR_8g088470 79.381 485 99 1 12 495 8 492 0.0 816
MsG0780037492.01.T01 MTR_1g035670 53.521 497 219 5 10 496 10 504 0.0 564
MsG0780037492.01.T01 MTR_6g004670 55.668 494 210 4 9 494 13 505 0.0 555
MsG0780037492.01.T01 MTR_1g036130 51.606 498 227 5 12 496 12 508 0.0 546
MsG0780037492.01.T01 MTR_6g004630 54.251 494 218 4 10 496 13 505 0.0 546
MsG0780037492.01.T01 MTR_1g035790 52.372 506 229 7 1 496 1 504 0.0 541
MsG0780037492.01.T01 MTR_6g004590 52.988 502 217 5 13 496 17 517 0.0 540
MsG0780037492.01.T01 MTR_6g004600 52.475 505 221 4 10 496 14 517 0.0 538
MsG0780037492.01.T01 MTR_1g036200 52.590 502 229 6 3 496 1 501 0.0 537
MsG0780037492.01.T01 MTR_1g035750 51.081 509 234 3 1 496 1 507 0.0 535
MsG0780037492.01.T01 MTR_1g035760 51.927 493 206 7 12 496 12 481 0.0 535
MsG0780037492.01.T01 MTR_1g035830 50.797 502 230 6 10 496 10 509 0.0 529
MsG0780037492.01.T01 MTR_1g036010 50.598 502 231 6 10 496 10 509 0.0 526
MsG0780037492.01.T01 MTR_1g035800 51.758 512 229 6 1 494 1 512 0.0 526
MsG0780037492.01.T01 MTR_6g004610 55.292 463 199 4 38 493 1 462 0.0 523
MsG0780037492.01.T01 MTR_1g050362 51.889 503 222 8 9 494 7 506 0.0 518
MsG0780037492.01.T01 MTR_1g035580 51.195 502 218 6 10 496 9 498 0.0 516
MsG0780037492.01.T01 MTR_1g036270 50.195 514 237 6 1 496 1 513 3.08e-178 510
MsG0780037492.01.T01 MTR_1g035940 48.503 501 243 5 10 496 10 509 4.38e-175 502
MsG0780037492.01.T01 MTR_1g035860 46.804 438 221 5 9 436 15 450 1.09e-146 429
MsG0780037492.01.T01 MTR_1g069715 51.351 407 181 6 84 475 2 406 1.32e-146 435
MsG0780037492.01.T01 MTR_1g037560 41.684 487 269 5 23 494 57 543 5.16e-135 402
MsG0780037492.01.T01 MTR_1g037550 40.081 494 277 5 20 494 54 547 8.62e-135 401
MsG0780037492.01.T01 MTR_4g075110 39.286 504 290 6 6 494 47 549 8.21e-132 394
MsG0780037492.01.T01 MTR_4g012320 79.111 225 47 0 272 496 1 225 5.16e-131 379
MsG0780037492.01.T01 MTR_8g030590 40.000 485 265 10 33 496 33 512 4.58e-117 355
MsG0780037492.01.T01 MTR_5g070010 38.750 480 275 7 33 496 34 510 2.19e-114 347
MsG0780037492.01.T01 MTR_8g098435 39.167 480 271 9 33 496 33 507 2.70e-111 339
MsG0780037492.01.T01 MTR_3g463060 36.820 478 276 7 33 496 39 504 3.51e-103 318
MsG0780037492.01.T01 MTR_1g060550 39.348 399 224 9 77 467 93 481 4.08e-86 274
MsG0780037492.01.T01 MTR_4g119660 33.397 524 306 13 5 495 3 516 6.84e-86 274
MsG0780037492.01.T01 MTR_5g019140 33.721 516 299 12 13 495 26 531 1.20e-85 273
MsG0780037492.01.T01 MTR_3g080580 33.333 498 300 11 19 494 30 517 1.38e-84 271
MsG0780037492.01.T01 MTR_7g096340 32.278 474 296 11 33 494 42 502 6.58e-82 263
MsG0780037492.01.T01 MTR_7g029275 32.544 507 306 10 9 494 17 508 8.87e-82 263
MsG0780037492.01.T01 MTR_1g070365 32.851 484 302 11 23 494 32 504 2.12e-81 262
MsG0780037492.01.T01 MTR_7g088330 34.127 504 296 15 13 494 19 508 2.40e-81 261
MsG0780037492.01.T01 MTR_1g070345 32.922 486 293 13 27 495 36 505 6.28e-81 261
MsG0780037492.01.T01 MTR_2g086040 34.434 424 259 8 74 491 85 495 1.12e-80 259
MsG0780037492.01.T01 MTR_8g035860 34.100 478 290 13 34 495 42 510 1.40e-80 259
MsG0780037492.01.T01 MTR_7g096320 32.135 473 298 10 33 494 43 503 2.95e-79 256
MsG0780037492.01.T01 MTR_8g035780 34.043 470 285 11 34 487 43 503 3.85e-79 256
MsG0780037492.01.T01 MTR_4g054920 34.633 436 255 10 79 495 93 517 6.06e-79 256
MsG0780037492.01.T01 MTR_8g035820 34.624 439 266 11 73 495 77 510 2.68e-78 254
MsG0780037492.01.T01 MTR_7g406990 38.746 351 203 6 30 369 47 396 3.30e-76 246
MsG0780037492.01.T01 MTR_8g035810 32.569 436 267 10 79 495 84 511 1.18e-75 247
MsG0780037492.01.T01 MTR_1g102220 31.120 482 295 12 34 495 43 507 3.52e-73 240
MsG0780037492.01.T01 MTR_8g035680 28.721 477 301 12 34 489 49 507 1.11e-67 226
MsG0780037492.01.T01 MTR_8g035760 28.330 473 307 13 34 489 49 506 2.40e-65 220
MsG0780037492.01.T01 MTR_8g035810 32.447 376 228 9 79 436 84 451 1.69e-62 211
MsG0780037492.01.T01 MTR_8g035680 27.763 371 237 8 136 489 4 360 4.67e-51 178
MsG0780037492.01.T01 MTR_6g084040 44.253 174 78 2 10 182 10 165 3.49e-44 153
MsG0780037492.01.T01 MTR_1g102210 29.630 351 199 10 155 490 40 357 8.04e-42 153
MsG0780037492.01.T01 MTR_8g035810 30.363 303 194 6 79 367 84 383 5.19e-39 146
MsG0780037492.01.T01 MTR_1g070370 33.466 251 148 6 168 412 5 242 1.45e-38 141
MsG0780037492.01.T01 MTR_7g079440 27.193 456 284 20 61 494 219 648 5.09e-35 139
MsG0780037492.01.T01 MTR_1g062190 25.346 434 296 13 75 494 120 539 2.06e-30 124
MsG0780037492.01.T01 MTR_5g009110 25.106 470 286 17 77 495 117 571 7.19e-30 123
MsG0780037492.01.T01 MTR_7g079440 27.926 376 227 16 61 417 219 569 1.15e-27 117
MsG0780037492.01.T01 MTR_5g009110 24.485 437 266 15 109 495 1 423 3.33e-27 114
MsG0780037492.01.T01 MTR_2g062670 35.602 191 116 4 148 337 49 233 3.40e-25 108
MsG0780037492.01.T01 MTR_2g062670 30.526 190 88 5 148 337 265 410 2.18e-17 85.1
MsG0780037492.01.T01 MTR_2g072270 23.810 462 270 19 63 489 104 518 5.58e-25 108
MsG0780037492.01.T01 MTR_1g050590 43.590 117 60 2 246 357 3 118 5.60e-25 99.8
MsG0780037492.01.T01 MTR_8g046580 47.059 102 51 2 369 469 193 292 1.67e-24 103
MsG0780037492.01.T01 MTR_1g101040 29.434 265 172 7 229 487 253 508 1.31e-23 104
MsG0780037492.01.T01 MTR_1g040110 38.583 127 75 1 109 232 41 167 1.39e-23 97.8
MsG0780037492.01.T01 MTR_6g072490 28.409 264 176 7 229 487 251 506 1.32e-22 101
MsG0780037492.01.T01 MTR_3g093530 22.611 429 297 12 79 493 116 523 2.36e-22 100
MsG0780037492.01.T01 MTR_1g101050 28.030 264 177 7 229 487 249 504 2.61e-22 100
MsG0780037492.01.T01 MTR_4g113650 22.653 490 307 13 39 496 72 521 3.28e-22 100
MsG0780037492.01.T01 MTR_7g006900 26.840 231 150 5 266 492 255 470 6.32e-22 99.0
MsG0780037492.01.T01 MTR_1g085680 22.907 454 296 15 61 492 93 514 2.63e-21 97.4
MsG0780037492.01.T01 MTR_6g017325 24.235 392 266 13 109 492 137 505 4.40e-21 96.7
MsG0780037492.01.T01 MTR_0147s0030 23.009 452 302 14 59 493 108 530 1.11e-20 95.5
MsG0780037492.01.T01 MTR_2g072400 23.129 441 299 14 70 493 98 515 1.81e-20 94.7
MsG0780037492.01.T01 MTR_7g079440 28.322 286 168 13 61 327 219 486 2.24e-20 94.4
MsG0780037492.01.T01 MTR_8g042000 22.976 457 299 15 58 493 99 523 2.52e-20 94.4
MsG0780037492.01.T01 MTR_3g014880 22.263 539 334 21 10 494 16 523 6.74e-20 93.2
MsG0780037492.01.T01 MTR_0025s0110 22.479 476 307 17 38 487 80 519 1.09e-19 92.4
MsG0780037492.01.T01 MTR_7g098550 23.583 441 298 11 61 495 91 498 1.29e-19 92.0
MsG0780037492.01.T01 MTR_6g008620 25.000 460 274 19 25 442 38 468 1.55e-19 92.0
MsG0780037492.01.T01 MTR_6g008500 25.153 326 211 10 160 465 189 501 1.92e-19 91.7
MsG0780037492.01.T01 MTR_7g055793 22.467 454 304 14 58 493 100 523 1.93e-19 91.7
MsG0780037492.01.T01 MTR_7g055793 22.467 454 304 14 58 493 45 468 2.11e-19 91.3
MsG0780037492.01.T01 MTR_8g042020 22.894 463 291 14 58 493 99 522 2.85e-19 91.3
MsG0780037492.01.T01 MTR_7g098550 23.129 441 308 10 61 495 91 506 3.65e-19 90.9
MsG0780037492.01.T01 MTR_2g055430 22.422 446 295 16 70 493 101 517 5.02e-19 90.5
MsG0780037492.01.T01 MTR_2g072340 22.366 465 318 16 46 493 77 515 6.30e-19 90.1
MsG0780037492.01.T01 MTR_8g008530 22.103 466 293 14 58 493 93 518 7.29e-19 89.7
MsG0780037492.01.T01 MTR_5g095230 22.737 475 308 19 38 493 79 513 9.28e-19 89.4
MsG0780037492.01.T01 MTR_5g009110 26.567 335 209 13 77 388 117 437 1.16e-18 89.0
MsG0780037492.01.T01 MTR_6g022450 24.633 341 230 9 163 493 175 498 1.80e-18 88.6
MsG0780037492.01.T01 MTR_1g069200 21.475 461 321 15 42 487 71 505 2.59e-18 88.2
MsG0780037492.01.T01 MTR_6g008600 27.003 337 197 13 134 449 167 475 3.06e-18 87.8
MsG0780037492.01.T01 MTR_6g008650 23.031 508 323 22 10 473 16 499 3.07e-18 87.8
MsG0780037492.01.T01 MTR_2g010250 26.812 276 178 8 236 494 237 505 3.70e-18 87.4
MsG0780037492.01.T01 MTR_2g023680 24.079 407 271 13 104 493 132 517 4.28e-18 87.4
MsG0780037492.01.T01 MTR_6g008530 27.350 234 152 7 242 465 270 495 5.80e-18 87.0
MsG0780037492.01.T01 MTR_2g055470 20.899 445 303 15 70 493 101 517 8.91e-18 86.7
MsG0780037492.01.T01 MTR_6g042540 22.790 509 332 18 3 473 7 492 1.27e-17 85.9
MsG0780037492.01.T01 MTR_8g042060 22.581 465 312 15 48 493 88 523 1.54e-17 85.9
MsG0780037492.01.T01 MTR_1g036140 42.000 100 52 2 247 341 68 166 1.80e-17 80.5
MsG0780037492.01.T01 MTR_1g036140 36.082 97 54 3 10 99 10 105 1.99e-12 65.9
MsG0780037492.01.T01 MTR_6g042610 23.256 473 311 17 33 473 41 493 2.06e-17 85.5
MsG0780037492.01.T01 MTR_1g015860 26.820 261 179 6 241 495 275 529 2.26e-17 85.1
MsG0780037492.01.T01 MTR_4g018800 24.675 462 279 22 25 444 36 470 2.92e-17 85.1
MsG0780037492.01.T01 MTR_8g104030 23.750 240 165 5 233 460 8 241 2.93e-17 82.4
MsG0780037492.01.T01 MTR_8g036185 24.848 330 218 9 163 470 168 489 3.35e-17 84.7
MsG0780037492.01.T01 MTR_7g012860 26.496 234 154 7 235 462 241 462 4.11e-17 84.3
MsG0780037492.01.T01 MTR_0287s0060 26.496 234 154 7 235 462 241 462 4.11e-17 84.3
MsG0780037492.01.T01 MTR_2g072250 22.500 440 302 14 70 493 97 513 5.35e-17 84.0
MsG0780037492.01.T01 MTR_8g042060 27.228 202 130 4 297 493 298 487 6.49e-17 83.6
MsG0780037492.01.T01 MTR_8g098565 28.652 178 123 3 295 469 302 478 9.89e-17 83.2
MsG0780037492.01.T01 MTR_2g061750 29.508 183 104 7 74 237 12 188 1.45e-16 78.6
MsG0780037492.01.T01 MTR_2g061740 29.508 183 104 7 74 237 12 188 1.76e-16 78.6
MsG0780037492.01.T01 MTR_8g035790 40.404 99 55 3 398 494 1 97 1.86e-16 75.5
MsG0780037492.01.T01 MTR_7g103450 29.961 257 158 12 242 493 267 506 2.00e-16 82.4
MsG0780037492.01.T01 MTR_5g070920 26.217 267 178 8 233 489 233 490 2.00e-16 82.4
MsG0780037492.01.T01 MTR_4g104610 22.703 370 240 10 144 487 142 491 2.58e-16 82.0
MsG0780037492.01.T01 MTR_8g076290 26.852 216 138 7 242 444 242 450 3.10e-16 81.6
MsG0780037492.01.T01 MTR_5g034900 26.852 216 153 4 282 494 304 517 4.17e-16 81.3
MsG0780037492.01.T01 MTR_3g104560 27.586 261 165 9 245 495 156 402 4.27e-16 80.5
MsG0780037492.01.T01 MTR_8g012585 21.519 395 278 10 121 494 66 449 5.09e-16 80.9
MsG0780037492.01.T01 MTR_3g104560 27.586 261 165 9 245 495 291 537 5.38e-16 80.9
MsG0780037492.01.T01 MTR_6g008640 22.334 497 303 18 25 473 36 497 5.51e-16 80.9
MsG0780037492.01.T01 MTR_8g042040 22.658 459 281 15 58 493 99 506 5.52e-16 80.9
MsG0780037492.01.T01 MTR_2g010290 24.906 265 181 7 236 494 280 532 6.41e-16 80.9
MsG0780037492.01.T01 MTR_5g009110 25.828 302 189 11 109 388 1 289 8.51e-16 78.6
MsG0780037492.01.T01 MTR_8g104100 23.558 208 146 4 260 460 21 222 8.61e-16 77.8
MsG0780037492.01.T01 MTR_2g062680 32.353 136 61 2 286 420 32 137 9.71e-16 75.9
MsG0780037492.01.T01 MTR_6g004570 43.519 108 39 4 243 332 6 109 1.62e-15 76.6
MsG0780037492.01.T01 MTR_0181s0030 22.777 461 323 17 25 470 31 473 1.75e-15 79.3
MsG0780037492.01.T01 MTR_2g072310 26.633 199 135 4 297 493 161 350 2.23e-15 77.8
MsG0780037492.01.T01 MTR_2g072380 27.136 199 134 4 297 493 161 350 2.49e-15 77.8
MsG0780037492.01.T01 MTR_8g469360 22.611 429 283 14 85 493 24 423 2.69e-15 78.2
MsG0780037492.01.T01 MTR_2g072380 27.136 199 134 4 297 493 301 490 3.89e-15 78.2
MsG0780037492.01.T01 MTR_2g010320 23.779 307 210 10 203 494 206 503 4.42e-15 78.2
MsG0780037492.01.T01 MTR_1g022040 22.500 440 293 15 70 493 95 502 4.45e-15 78.2
MsG0780037492.01.T01 MTR_5g070690 25.101 247 168 5 240 476 238 477 6.35e-15 77.4
MsG0780037492.01.T01 MTR_5g070800 25.101 247 168 5 240 476 238 477 6.35e-15 77.4
MsG0780037492.01.T01 MTR_5g070710 24.308 325 214 10 145 455 151 457 6.79e-15 77.4
MsG0780037492.01.T01 MTR_7g012330 24.786 234 157 7 242 469 249 469 8.98e-15 77.0
MsG0780037492.01.T01 MTR_6g008430 29.940 167 109 4 284 449 307 466 9.29e-15 77.0
MsG0780037492.01.T01 MTR_2g010330 27.684 177 125 3 295 469 305 480 9.34e-15 77.0
MsG0780037492.01.T01 MTR_0171s0030 25.969 258 172 8 222 467 138 388 1.07e-14 76.6
MsG0780037492.01.T01 MTR_2g010280 25.000 244 171 5 236 469 235 476 2.47e-14 75.9
MsG0780037492.01.T01 MTR_6g084770 25.311 241 160 7 233 460 233 466 3.20e-14 75.5
MsG0780037492.01.T01 MTR_4g031820 22.477 436 285 15 70 493 111 505 4.42e-14 75.1
MsG0780037492.01.T01 MTR_4g104540 29.448 163 109 3 282 444 220 376 4.48e-14 74.7
MsG0780037492.01.T01 MTR_5g091760 22.769 325 220 10 143 463 150 447 4.86e-14 74.7
MsG0780037492.01.T01 MTR_4g094775 23.932 234 162 6 240 473 250 467 6.12e-14 74.3
MsG0780037492.01.T01 MTR_2g010380 22.541 244 177 5 236 469 241 482 6.19e-14 74.3
MsG0780037492.01.T01 MTR_2g072260 21.065 432 298 14 80 493 104 510 6.24e-14 74.3
MsG0780037492.01.T01 MTR_4g104570 30.464 151 99 3 294 444 1 145 7.37e-14 70.9
MsG0780037492.01.T01 MTR_5g070830 24.623 199 141 3 266 460 382 575 8.54e-14 74.3
MsG0780037492.01.T01 MTR_4g031820 23.318 446 291 17 70 493 111 527 9.77e-14 73.9
MsG0780037492.01.T01 MTR_4g088420 26.374 182 126 4 294 473 31 206 1.03e-13 71.2
MsG0780037492.01.T01 MTR_1g091003 24.312 218 157 5 245 462 248 457 1.16e-13 73.6
MsG0780037492.01.T01 MTR_1g091023 24.091 220 155 6 245 462 248 457 1.76e-13 72.8
MsG0780037492.01.T01 MTR_0171s0010 26.577 222 145 7 254 469 266 475 1.92e-13 72.8
MsG0780037492.01.T01 MTR_4g088195 21.925 374 246 14 121 471 128 478 3.01e-13 72.4
MsG0780037492.01.T01 MTR_1g091010 23.853 218 158 5 245 462 247 456 3.48e-13 72.0
MsG0780037492.01.T01 MTR_8g063280 25.628 199 140 4 267 463 272 464 3.83e-13 72.0
MsG0780037492.01.T01 MTR_3g436390 26.522 230 154 8 232 455 238 458 4.40e-13 71.6
MsG0780037492.01.T01 MTR_6g084900 22.944 231 163 5 240 460 3 228 4.72e-13 69.7
MsG0780037492.01.T01 MTR_5g026520 27.429 175 118 5 277 448 292 460 5.12e-13 71.6
MsG0780037492.01.T01 MTR_5g470730 25.090 279 178 7 157 420 164 426 6.90e-13 70.9
MsG0780037492.01.T01 MTR_2g061200 19.205 453 314 11 64 493 105 528 7.26e-13 71.2
MsG0780037492.01.T01 MTR_4g077210 25.229 218 154 4 233 448 241 451 7.66e-13 70.9
MsG0780037492.01.T01 MTR_2g072420 29.371 143 95 3 356 496 5 143 9.36e-13 66.2
MsG0780037492.01.T01 MTR_5g056720 26.357 258 150 10 244 489 191 420 1.22e-12 70.1
MsG0780037492.01.T01 MTR_0022s0290 24.255 235 159 8 233 455 245 472 1.37e-12 70.1
MsG0780037492.01.T01 MTR_7g056103 21.369 482 324 19 6 460 16 469 1.53e-12 70.1
MsG0780037492.01.T01 MTR_5g070700 22.692 260 183 6 240 489 240 491 1.60e-12 70.1
MsG0780037492.01.T01 MTR_5g019010 23.094 459 295 18 32 464 40 466 1.62e-12 70.1
MsG0780037492.01.T01 MTR_5g007460 22.407 241 158 4 230 470 236 447 1.79e-12 69.7
MsG0780037492.01.T01 MTR_4g078110 26.984 189 131 4 257 444 240 422 1.82e-12 69.7
MsG0780037492.01.T01 MTR_4g088400 25.610 246 171 6 233 473 256 494 1.91e-12 69.7
MsG0780037492.01.T01 MTR_8g012970 25.778 225 157 4 257 480 258 473 2.27e-12 69.3
MsG0780037492.01.T01 MTR_2g010300 25.000 204 134 5 295 494 301 489 2.64e-12 69.3
MsG0780037492.01.T01 MTR_4g104550 22.082 317 212 11 143 444 141 437 2.67e-12 69.3
MsG0780037492.01.T01 MTR_5g010750 20.825 509 349 19 1 494 1 470 2.71e-12 69.3
MsG0780037492.01.T01 MTR_8g089800 25.926 243 163 7 239 473 237 470 2.75e-12 69.3
MsG0780037492.01.T01 MTR_4g026200 22.511 231 170 7 235 463 237 460 2.80e-12 69.3
MsG0780037492.01.T01 MTR_3g076530 24.138 232 153 8 240 463 251 467 3.71e-12 68.9
MsG0780037492.01.T01 MTR_5g018500 24.691 162 115 4 306 465 4 160 3.87e-12 65.9
MsG0780037492.01.T01 MTR_1750s0010 25.658 152 107 3 293 444 1 146 4.23e-12 64.7
MsG0780037492.01.T01 MTR_5g010750 21.294 479 325 18 1 464 1 442 5.87e-12 68.2
MsG0780037492.01.T01 MTR_5g070850 21.170 359 251 12 110 454 119 459 6.33e-12 68.2
MsG0780037492.01.T01 MTR_1g107300 23.000 200 130 5 300 494 9 189 7.12e-12 65.5
MsG0780037492.01.T01 MTR_1g031700 25.123 203 132 7 266 462 271 459 8.03e-12 67.8
MsG0780037492.01.T01 MTR_3g057980 25.378 331 185 19 160 464 165 459 9.15e-12 67.8
MsG0780037492.01.T01 MTR_1g107295 21.569 255 168 6 227 460 232 475 1.06e-11 67.4
MsG0780037492.01.T01 MTR_3g025260 22.957 257 179 8 220 466 228 475 1.08e-11 67.4
MsG0780037492.01.T01 MTR_4g088170 22.133 375 246 14 121 471 128 480 1.27e-11 67.4
MsG0780037492.01.T01 MTR_4g088160 20.755 371 246 14 121 467 128 474 1.37e-11 67.0
MsG0780037492.01.T01 MTR_4g088425 27.755 245 161 8 233 470 239 474 1.86e-11 66.6
MsG0780037492.01.T01 MTR_7g075540 27.053 207 128 8 266 463 272 464 2.98e-11 65.9
MsG0780037492.01.T01 MTR_4g088405 28.125 192 130 4 284 473 223 408 3.49e-11 65.5
MsG0780037492.01.T01 MTR_4g109470 22.594 239 170 5 233 463 236 467 4.25e-11 65.5
MsG0780037492.01.T01 MTR_5g070840 26.619 139 97 2 324 460 1 136 4.67e-11 62.0
MsG0780037492.01.T01 MTR_1g031710 26.012 173 113 5 253 420 67 229 4.74e-11 64.3
MsG0780037492.01.T01 MTR_5g095260 23.099 355 238 14 121 463 134 465 5.09e-11 65.5
MsG0780037492.01.T01 MTR_5g007450 22.689 238 145 6 230 463 259 461 5.34e-11 65.1
MsG0780037492.01.T01 MTR_4g062500 21.552 232 163 8 242 460 248 473 5.54e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037492.01.T01 AT2G23180 44.553 514 265 4 1 495 1 513 1.04e-158 461
MsG0780037492.01.T01 AT4G39490 43.629 518 270 4 1 496 1 518 4.42e-158 459
MsG0780037492.01.T01 AT2G21910 46.575 511 255 7 1 496 1 508 3.32e-153 446
MsG0780037492.01.T01 AT4G39500 44.246 504 251 6 12 494 22 516 8.31e-150 438
MsG0780037492.01.T01 AT4G39480 44.576 507 265 3 6 496 9 515 1.30e-147 432
MsG0780037492.01.T01 AT1G57750 42.063 504 272 4 1 494 3 496 1.23e-146 429
MsG0780037492.01.T01 AT1G65340 43.281 506 265 4 3 493 4 502 1.98e-144 424
MsG0780037492.01.T01 AT4G39500 44.894 470 242 4 38 494 1 466 2.19e-144 422
MsG0780037492.01.T01 AT4G32170 42.636 516 261 7 1 494 1 503 1.89e-143 421
MsG0780037492.01.T01 AT5G52320 44.033 486 251 5 22 493 23 501 4.61e-143 420
MsG0780037492.01.T01 AT1G47620 43.633 479 246 4 33 494 44 515 2.36e-142 419
MsG0780037492.01.T01 AT4G39510 42.485 499 260 4 14 494 16 505 2.85e-142 419
MsG0780037492.01.T01 AT5G52320 44.075 481 248 5 22 488 23 496 3.66e-141 415
MsG0780037492.01.T01 AT5G08250 39.096 509 287 8 6 496 39 542 2.56e-128 384
MsG0780037492.01.T01 AT5G23190 37.945 506 298 5 6 496 38 542 3.32e-128 384
MsG0780037492.01.T01 AT5G02900 41.865 504 236 9 12 494 12 479 2.27e-127 379
MsG0780037492.01.T01 AT5G08250 39.419 482 269 8 33 496 4 480 8.15e-124 370
MsG0780037492.01.T01 AT3G26125 38.710 496 277 8 25 496 42 534 8.98e-116 352
MsG0780037492.01.T01 AT1G57750 40.046 432 239 4 1 422 3 424 4.56e-113 341
MsG0780037492.01.T01 AT1G63710 38.382 482 274 9 33 496 33 509 4.59e-113 344
MsG0780037492.01.T01 AT1G01600 37.965 511 287 11 13 496 8 515 4.05e-112 343
MsG0780037492.01.T01 AT2G45970 38.557 485 272 9 33 496 33 512 1.36e-111 341
MsG0780037492.01.T01 AT1G13150 38.767 503 279 13 15 496 25 519 2.43e-111 340
MsG0780037492.01.T01 AT1G13140 38.193 487 273 11 31 496 47 526 6.73e-111 339
MsG0780037492.01.T01 AT1G24540 37.395 476 283 5 33 494 46 520 7.60e-111 338
MsG0780037492.01.T01 AT5G58860 38.153 498 290 8 12 494 14 508 5.42e-110 336
MsG0780037492.01.T01 AT4G00360 37.917 509 288 10 13 496 8 513 8.45e-110 337
MsG0780037492.01.T01 AT1G13140 37.238 478 264 10 31 496 47 500 1.13e-107 330
MsG0780037492.01.T01 AT3G56630 35.967 481 275 15 33 495 34 499 1.48e-87 278
MsG0780037492.01.T01 AT1G34540 34.937 478 283 14 33 495 34 498 8.67e-86 273
MsG0780037492.01.T01 AT2G27690 36.574 432 255 8 74 495 73 495 5.63e-85 271
MsG0780037492.01.T01 AT1G69500 31.740 523 308 12 13 495 11 524 6.09e-83 266
MsG0780037492.01.T01 AT2G45510 34.115 469 285 12 34 487 42 501 1.02e-80 260
MsG0780037492.01.T01 AT3G48520 34.240 441 262 9 69 495 74 500 5.49e-80 258
MsG0780037492.01.T01 AT2G44890 33.053 475 282 16 34 487 42 501 2.85e-77 251
MsG0780037492.01.T01 AT5G63450 34.180 433 256 11 77 494 84 502 1.19e-75 247
MsG0780037492.01.T01 AT5G63450 34.180 433 256 11 77 494 142 560 7.61e-75 246
MsG0780037492.01.T01 AT2G44890 31.915 470 276 14 34 487 42 483 1.50e-73 241
MsG0780037492.01.T01 AT3G01900 31.315 479 303 11 26 494 28 490 2.87e-71 235
MsG0780037492.01.T01 AT1G31800 26.932 453 291 18 61 495 140 570 4.48e-35 139
MsG0780037492.01.T01 AT3G53130 26.606 436 288 16 75 494 120 539 5.00e-32 129
MsG0780037492.01.T01 AT2G26710 24.053 449 295 13 61 493 96 514 5.40e-26 111
MsG0780037492.01.T01 AT2G46950 23.556 450 299 14 59 492 148 568 1.13e-25 110
MsG0780037492.01.T01 AT5G52400 24.099 444 303 14 58 492 99 517 7.83e-22 99.0
MsG0780037492.01.T01 AT4G27710 25.164 457 287 20 57 491 91 514 1.15e-21 98.6
MsG0780037492.01.T01 AT2G46960 22.944 462 295 16 57 492 89 515 3.47e-21 97.1
MsG0780037492.01.T01 AT5G24900 23.310 429 290 15 82 491 116 524 6.13e-21 96.3
MsG0780037492.01.T01 AT5G24900 23.239 426 288 15 85 491 2 407 1.22e-20 94.4
MsG0780037492.01.T01 AT1G66030 30.588 170 100 3 1 159 1 163 2.06e-20 88.6
MsG0780037492.01.T01 AT5G51900 38.806 134 67 2 216 334 3 136 3.17e-20 90.1
MsG0780037492.01.T01 AT3G14660 22.907 454 302 17 57 493 89 511 8.59e-20 92.8
MsG0780037492.01.T01 AT3G14640 22.926 458 299 17 57 493 111 535 1.82e-19 91.7
MsG0780037492.01.T01 AT3G14650 23.128 454 301 18 57 493 89 511 2.15e-19 91.7
MsG0780037492.01.T01 AT3G14640 22.926 458 299 17 57 493 89 513 2.29e-19 91.3
MsG0780037492.01.T01 AT3G14630 23.871 465 306 17 46 493 74 507 2.49e-19 91.3
MsG0780037492.01.T01 AT3G14680 24.009 454 297 18 57 493 89 511 2.67e-19 91.3
MsG0780037492.01.T01 AT4G13310 26.042 384 236 15 75 444 93 442 3.27e-19 90.9
MsG0780037492.01.T01 AT3G14630 23.871 465 306 17 46 493 129 562 4.26e-19 90.9
MsG0780037492.01.T01 AT5G24910 21.429 476 317 17 46 494 87 532 5.18e-19 90.5
MsG0780037492.01.T01 AT3G48300 26.524 328 222 11 167 489 164 477 1.06e-18 89.4
MsG0780037492.01.T01 AT3G48300 26.524 328 222 11 167 489 166 479 1.07e-18 89.4
MsG0780037492.01.T01 AT2G27000 24.679 389 268 12 121 496 132 508 1.12e-18 89.4
MsG0780037492.01.T01 AT4G13290 28.421 285 176 8 167 444 172 435 2.89e-18 87.8
MsG0780037492.01.T01 AT3G61040 27.830 212 146 5 253 463 255 460 3.44e-18 87.8
MsG0780037492.01.T01 AT3G25180 21.583 417 292 9 75 473 84 483 4.74e-18 87.4
MsG0780037492.01.T01 AT3G14620 23.451 452 289 16 56 486 92 507 2.00e-17 85.5
MsG0780037492.01.T01 AT3G14690 21.769 441 300 15 70 493 99 511 5.29e-17 84.0
MsG0780037492.01.T01 AT3G14690 21.769 441 300 15 70 493 134 546 5.38e-17 84.3
MsG0780037492.01.T01 AT1G01280 22.695 423 273 18 71 462 71 470 5.45e-17 84.0
MsG0780037492.01.T01 AT3G14660 26.866 268 171 9 236 493 113 365 6.09e-17 82.8
MsG0780037492.01.T01 AT1G64940 22.878 271 197 4 227 489 237 503 6.71e-17 84.0
MsG0780037492.01.T01 AT4G15350 23.858 394 265 15 121 496 128 504 1.75e-16 82.4
MsG0780037492.01.T01 AT4G37340 25.000 288 196 8 165 448 169 440 5.27e-16 80.9
MsG0780037492.01.T01 AT2G46960 22.670 397 250 14 121 492 35 399 5.31e-16 80.5
MsG0780037492.01.T01 AT3G20140 25.000 316 212 11 152 459 166 464 8.04e-16 80.5
MsG0780037492.01.T01 AT3G20940 27.477 222 147 6 240 455 255 468 8.10e-16 80.5
MsG0780037492.01.T01 AT5G38450 22.716 405 262 11 109 492 140 514 1.73e-15 79.3
MsG0780037492.01.T01 AT1G64950 24.771 218 158 3 274 489 289 502 2.40e-15 79.0
MsG0780037492.01.T01 AT3G48270 26.596 282 185 12 167 442 166 431 6.39e-15 77.4
MsG0780037492.01.T01 AT3G20110 25.075 335 232 9 121 450 132 452 6.54e-15 77.4
MsG0780037492.01.T01 AT3G20935 29.480 173 111 5 294 462 134 299 1.01e-14 75.9
MsG0780037492.01.T01 AT5G07990 24.901 253 160 12 228 463 227 466 1.33e-14 76.6
MsG0780037492.01.T01 AT2G45580 25.630 238 153 8 235 463 96 318 1.59e-14 75.5
MsG0780037492.01.T01 AT2G45580 25.630 238 153 8 235 463 250 472 2.83e-14 75.5
MsG0780037492.01.T01 AT4G15360 23.631 347 228 13 121 450 133 459 8.33e-14 74.3
MsG0780037492.01.T01 AT4G37410 23.511 319 224 9 145 459 147 449 1.31e-13 73.6
MsG0780037492.01.T01 AT1G75130 22.940 449 280 17 61 486 90 495 1.74e-13 73.2
MsG0780037492.01.T01 AT4G13770 22.944 231 173 4 238 467 241 467 2.21e-13 72.8
MsG0780037492.01.T01 AT3G48310 23.975 317 215 11 163 471 163 461 2.45e-13 72.4
MsG0780037492.01.T01 AT1G50520 23.324 343 235 14 121 450 138 465 2.78e-13 72.4
MsG0780037492.01.T01 AT1G01190 26.699 206 135 7 298 494 338 536 2.89e-13 72.4
MsG0780037492.01.T01 AT1G01190 26.699 206 135 7 298 494 333 531 2.91e-13 72.4
MsG0780037492.01.T01 AT5G35715 23.571 420 246 16 71 460 23 397 4.55e-13 71.6
MsG0780037492.01.T01 AT2G12190 23.636 220 160 4 274 489 289 504 4.97e-13 71.6
MsG0780037492.01.T01 AT1G66540 24.080 299 197 10 159 448 50 327 7.05e-13 70.5
MsG0780037492.01.T01 AT3G48280 23.592 284 190 8 168 442 166 431 1.08e-12 70.5
MsG0780037492.01.T01 AT1G67110 24.889 225 150 4 273 492 298 508 1.38e-12 70.5
MsG0780037492.01.T01 AT5G10610 23.444 482 300 22 9 459 7 450 1.64e-12 70.1
MsG0780037492.01.T01 AT5G47990 22.368 304 216 9 155 449 169 461 1.86e-12 69.7
MsG0780037492.01.T01 AT1G64930 25.110 227 161 6 274 495 288 510 2.03e-12 69.7
MsG0780037492.01.T01 AT3G26270 24.691 243 161 7 233 465 240 470 2.16e-12 69.7
MsG0780037492.01.T01 AT3G20080 24.444 360 235 12 156 496 33 374 2.24e-12 68.9
MsG0780037492.01.T01 AT3G20080 24.444 360 235 12 156 496 33 374 2.24e-12 68.9
MsG0780037492.01.T01 AT3G20080 24.444 360 235 12 156 496 33 374 2.24e-12 68.9
MsG0780037492.01.T01 AT3G20080 24.444 360 235 12 156 496 33 374 2.24e-12 68.9
MsG0780037492.01.T01 AT3G20080 24.444 360 235 12 156 496 170 511 2.34e-12 69.7
MsG0780037492.01.T01 AT3G20080 24.444 360 235 12 156 496 170 511 2.34e-12 69.7
MsG0780037492.01.T01 AT1G33720 23.629 237 169 5 266 496 148 378 2.39e-12 68.9
MsG0780037492.01.T01 AT1G33720 23.629 237 169 5 266 496 148 378 2.39e-12 68.9
MsG0780037492.01.T01 AT1G33720 23.629 237 169 5 266 496 148 378 2.39e-12 68.9
MsG0780037492.01.T01 AT3G03470 23.256 258 174 5 244 494 269 509 3.10e-12 69.3
MsG0780037492.01.T01 AT2G24180 23.237 241 165 6 256 487 262 491 3.74e-12 68.9
MsG0780037492.01.T01 AT2G23220 24.085 328 228 10 121 444 141 451 4.11e-12 68.9
MsG0780037492.01.T01 AT2G46660 23.789 227 157 7 240 462 279 493 4.96e-12 68.6
MsG0780037492.01.T01 AT4G20240 23.659 410 261 15 29 416 34 413 6.60e-12 67.8
MsG0780037492.01.T01 AT1G33720 23.629 237 169 5 266 496 280 510 6.74e-12 68.2
MsG0780037492.01.T01 AT1G33720 24.762 210 146 5 293 496 200 403 1.04e-11 67.0
MsG0780037492.01.T01 AT1G66540 23.875 289 190 10 169 448 1 268 1.08e-11 66.6
MsG0780037492.01.T01 AT3G20130 26.728 217 145 8 241 450 253 462 1.36e-11 67.0
MsG0780037492.01.T01 AT4G37400 24.415 299 206 9 166 459 166 449 1.41e-11 67.0
MsG0780037492.01.T01 AT3G20130 26.728 217 145 8 241 450 225 434 1.63e-11 67.0
MsG0780037492.01.T01 AT2G45560 24.910 277 184 9 230 495 246 509 1.69e-11 67.0
MsG0780037492.01.T01 AT2G30770 26.519 181 128 3 292 472 293 468 4.23e-11 65.5
MsG0780037492.01.T01 AT3G28740 24.294 354 222 13 121 459 134 456 4.56e-11 65.5
MsG0780037492.01.T01 AT3G20100 24.554 224 155 6 235 450 245 462 5.11e-11 65.5
MsG0780037492.01.T01 AT5G05260 25.962 208 145 5 241 447 273 472 5.12e-11 65.5
MsG0780037492.01.T01 AT2G45550 24.034 233 163 6 270 496 286 510 5.51e-11 65.1
MsG0780037492.01.T01 AT3G26200 22.865 363 246 13 121 465 120 466 6.38e-11 65.1

Find 98 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCATTGGAGAAATATTT+TGG 0.134143 7:-26920743 MsG0780037492.01.T01:CDS
GCTCTCTCACATGGAATTTC+AGG 0.159034 7:+26920162 None:intergenic
TTCTGAGAAATCCACCTTTC+TGG 0.163522 7:+26919514 None:intergenic
TACCATCAAGTGAACATAAT+TGG 0.197349 7:-26919762 MsG0780037492.01.T01:CDS
TCTTGTGGAAGCTGCAAAAT+TGG 0.201502 7:-26920089 MsG0780037492.01.T01:CDS
TTAGGTCTGATTCACATATT+TGG 0.218713 7:-26920413 MsG0780037492.01.T01:CDS
TCGGAAGGGTGGAGGAAATA+TGG 0.227134 7:-26919561 MsG0780037492.01.T01:CDS
GAACATAATTGGAAAGATTT+AGG 0.232318 7:-26919751 MsG0780037492.01.T01:CDS
TTGTCCTTGCATTTCTCTTT+TGG 0.233225 7:+26919990 None:intergenic
TGTGATGTGTTGCACGTTCT+TGG 0.254034 7:+26920509 None:intergenic
AACAGAAAGACTTGGGATTA+TGG 0.258538 7:+26919339 None:intergenic
AACATATGTTCTGTGGTATT+AGG 0.264357 7:-26920216 MsG0780037492.01.T01:CDS
TTCCAATTATGTTCACTTGA+TGG 0.285884 7:+26919760 None:intergenic
AAGCTTCATTGAGATGAAAA+TGG 0.304566 7:-26919413 MsG0780037492.01.T01:CDS
TGCAGCTTCCACAAGAGTTT+TGG 0.307166 7:+26920096 None:intergenic
TTCTGTTGAGCCTCCAATAA+TGG 0.310818 7:+26920697 None:intergenic
GACATAACTTTAAAACAAAA+TGG 0.310827 7:-26920594 MsG0780037492.01.T01:CDS
TTAACCATGGTCCTTCAAAA+AGG 0.318367 7:+26920562 None:intergenic
TGCTGGACCAAGGAGTTGTT+TGG 0.352265 7:-26919446 MsG0780037492.01.T01:CDS
AGATCAATAGAAAGACATTT+AGG 0.370231 7:+26920186 None:intergenic
TGGAAAGATTTAGGAGCAAA+AGG 0.375361 7:-26919742 MsG0780037492.01.T01:CDS
GAAACACACCAATCACAAAA+TGG 0.375398 7:-26920677 MsG0780037492.01.T01:CDS
ACAGAAAGACTTGGGATTAT+GGG 0.382050 7:+26919340 None:intergenic
CGGAAGGGTGGAGGAAATAT+GGG 0.397563 7:-26919560 MsG0780037492.01.T01:CDS
CTATTAGCTCGGGCCTTACT+TGG 0.399113 7:-26919852 MsG0780037492.01.T01:CDS
AAGTTCATTGCTTTCAATGC+TGG 0.422395 7:-26919463 MsG0780037492.01.T01:CDS
TGTGCAGATTTATGCTCAAA+AGG 0.438259 7:+26919655 None:intergenic
GTGATGTGTTGCACGTTCTT+GGG 0.444348 7:+26920510 None:intergenic
GAAAGCAATGAACTTGTAAG+AGG 0.446809 7:+26919471 None:intergenic
ATTTGCTTCCTAGTGGACAT+AGG 0.452064 7:-26919624 MsG0780037492.01.T01:CDS
TGTCCACTAGGAAGCAAATC+AGG 0.454087 7:+26919628 None:intergenic
CGGAGGACACATTGTTCATA+AGG 0.457115 7:-26920128 MsG0780037492.01.T01:CDS
AGCAAGTTAGTTTACCTACA+TGG 0.459663 7:-26919715 MsG0780037492.01.T01:CDS
ACACATGAAACATGGCTTGA+AGG 0.461488 7:-26919311 MsG0780037492.01.T01:CDS
ATCACAAAATGGCCTGTGCT+TGG 0.463931 7:-26920666 MsG0780037492.01.T01:CDS
GCTGGACCAAGGAGTTGTTT+GGG 0.470264 7:-26919445 MsG0780037492.01.T01:CDS
GGAAAGATTTAGGAGCAAAA+GGG 0.474975 7:-26919741 MsG0780037492.01.T01:CDS
CCTGTGCTTGGAATGCTACC+TGG 0.476136 7:-26920654 MsG0780037492.01.T01:CDS
TTTGCTTCCTAGTGGACATA+GGG 0.479551 7:-26919623 MsG0780037492.01.T01:CDS
CTGCAAAATTGGTTTCAAGT+TGG 0.480614 7:-26920078 MsG0780037492.01.T01:CDS
ATAATGTATGTGTTTGGCAT+TGG 0.480634 7:-26920756 MsG0780037492.01.T01:CDS
ACCAAGGAGTTGTTTGGGTA+AGG 0.491769 7:-26919440 MsG0780037492.01.T01:CDS
AGAATCTTAGCTTCAATCAA+AGG 0.493189 7:+26919805 None:intergenic
TTGCACGTTCTTGGGATCAC+TGG 0.495887 7:+26920518 None:intergenic
CTCTCTCACATGGAATTTCA+GGG 0.496357 7:+26920163 None:intergenic
GCTTGGAATTTAAACCAGAA+AGG 0.498570 7:-26919528 MsG0780037492.01.T01:CDS
TCAATTAATCTACTTGCAGC+TGG 0.503336 7:-26919883 MsG0780037492.01.T01:CDS
ACATTGATAATGTATGTGTT+TGG 0.505869 7:-26920762 None:intergenic
AATATCATTATGAATGAAGT+AGG 0.506125 7:-26919949 MsG0780037492.01.T01:CDS
AATATGGGGAGAAGATTGCT+TGG 0.509538 7:-26919545 MsG0780037492.01.T01:CDS
TGTGTCCTCCGCTAGTGTAA+AGG 0.525215 7:+26920140 None:intergenic
TGGAAGAGATACTATTAGCT+CGG 0.527180 7:-26919863 MsG0780037492.01.T01:CDS
TCCTTACCCAAACAACTCCT+TGG 0.528162 7:+26919439 None:intergenic
AGCACAAAGTTCGAAAACTA+CGG 0.534189 7:-26920486 MsG0780037492.01.T01:CDS
ATTATGAATGAAGTAGGAGA+TGG 0.541098 7:-26919943 MsG0780037492.01.T01:CDS
TCGTTGCAATCCATTATTGG+AGG 0.556704 7:-26920707 MsG0780037492.01.T01:CDS
GAAAGGTGGATTTCTCAGAA+AGG 0.556835 7:-26919511 MsG0780037492.01.T01:CDS
ATACTCCGTCGGAAGGGTGG+AGG 0.557016 7:-26919569 MsG0780037492.01.T01:CDS
TGGAATTTAAACCAGAAAGG+TGG 0.560001 7:-26919525 MsG0780037492.01.T01:CDS
GGAAGAGATACTATTAGCTC+GGG 0.561271 7:-26919862 MsG0780037492.01.T01:CDS
ATTCTCTATACTCCGTCGGA+AGG 0.561446 7:-26919576 MsG0780037492.01.T01:CDS
TGTAAGACAACAGAAAGACT+TGG 0.564398 7:+26919331 None:intergenic
AGTGTAAAGGCTCTCTCACA+TGG 0.565394 7:+26920153 None:intergenic
CCAGGTAGCATTCCAAGCAC+AGG 0.567414 7:+26920654 None:intergenic
CACAACGTATCCAACATTCA+CGG 0.568204 7:-26920624 MsG0780037492.01.T01:CDS
TCTATACTCCGTCGGAAGGG+TGG 0.569109 7:-26919572 MsG0780037492.01.T01:CDS
TATTTCCTCCACCCTTCCGA+CGG 0.573423 7:+26919564 None:intergenic
CTTTGACAACATATGTTCTG+TGG 0.575024 7:-26920223 MsG0780037492.01.T01:CDS
GCACAAAGTTCGAAAACTAC+GGG 0.575161 7:-26920485 MsG0780037492.01.T01:CDS
GTCTACATAACCGTGAATGT+TGG 0.575206 7:+26920614 None:intergenic
ATCTTAAGCCAAAACTCTTG+TGG 0.576068 7:-26920104 MsG0780037492.01.T01:CDS
TTCTCTATACTCCGTCGGAA+GGG 0.579589 7:-26919575 MsG0780037492.01.T01:CDS
ATGTTCATATTTGTTAACCA+TGG 0.582823 7:+26920549 None:intergenic
CACAGAACATATGTTGTCAA+AGG 0.582988 7:+26920224 None:intergenic
GATTTATGCTCAAAAGGTAT+CGG 0.588173 7:+26919661 None:intergenic
GGTGGATTTCTCAGAAAGGA+GGG 0.598377 7:-26919507 MsG0780037492.01.T01:CDS
GAGCTTTATGTGAAGCCTTG+AGG 0.598990 7:-26919693 MsG0780037492.01.T01:CDS
AAGTTCGAAAACTACGGGAA+AGG 0.604977 7:-26920480 MsG0780037492.01.T01:CDS
GAATTATCACATTCAAGTGG+TGG 0.608088 7:-26919371 MsG0780037492.01.T01:CDS
AAACCTGATTTGCTTCCTAG+TGG 0.608181 7:-26919631 MsG0780037492.01.T01:CDS
GTTGAATTATCACATTCAAG+TGG 0.609343 7:-26919374 MsG0780037492.01.T01:CDS
AGGTGGATTTCTCAGAAAGG+AGG 0.609698 7:-26919508 MsG0780037492.01.T01:CDS
GTGTATTCTCTATACTCCGT+CGG 0.610023 7:-26919580 MsG0780037492.01.T01:CDS
AAAGCAATGAACTTGTAAGA+GGG 0.614350 7:+26919472 None:intergenic
TTGCTTTCAATGCTGGACCA+AGG 0.618716 7:-26919456 MsG0780037492.01.T01:CDS
GTTGTCTTACACATGAAACA+TGG 0.631184 7:-26919319 MsG0780037492.01.T01:CDS
GACTCAACCCTATGTCCACT+AGG 0.632364 7:+26919616 None:intergenic
GTAAGACAACAGAAAGACTT+GGG 0.634736 7:+26919332 None:intergenic
CTTCACATAAAGCTCCATGT+AGG 0.635547 7:+26919701 None:intergenic
GGAAGGGTGGAGGAAATATG+GGG 0.642362 7:-26919559 MsG0780037492.01.T01:CDS
AAAACCAAAAGAGAAATGCA+AGG 0.650772 7:-26919994 MsG0780037492.01.T01:CDS
TTATGCTCAAAAGGTATCGG+CGG 0.659417 7:+26919664 None:intergenic
GATACGTTGTGTAAGAGACC+AGG 0.668163 7:+26920636 None:intergenic
ATGGTTAACAAATATGAACA+TGG 0.668971 7:-26920547 MsG0780037492.01.T01:CDS
TGAGAGAGCCTTTACACTAG+CGG 0.678400 7:-26920148 MsG0780037492.01.T01:CDS
TATCGGCGGATAAAGCCTCA+AGG 0.679760 7:+26919678 None:intergenic
ATAACTTTAAAACAAAATGG+AGG 0.687896 7:-26920591 MsG0780037492.01.T01:CDS
GAGAGCCTTTACACTAGCGG+AGG 0.710609 7:-26920145 MsG0780037492.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATCATTATGAATGAAGT+AGG - Chr7:26920089-26920108 MsG0780037492.01.T01:CDS 20.0%
!!! ATAACTTTAAAACAAAATGG+AGG - Chr7:26919447-26919466 MsG0780037492.01.T01:CDS 20.0%
!!! ATTTGCAAGATATTTTTCAA+AGG - Chr7:26919787-26919806 MsG0780037492.01.T01:CDS 20.0%
!!! GACATAACTTTAAAACAAAA+TGG - Chr7:26919444-26919463 MsG0780037492.01.T01:CDS 20.0%
!!! GTTACAAATTTTTTTCTCAA+CGG + Chr7:26919718-26919737 None:intergenic 20.0%
! AGATCAATAGAAAGACATTT+AGG + Chr7:26919855-26919874 None:intergenic 25.0%
! ATGGTTAACAAATATGAACA+TGG - Chr7:26919491-26919510 MsG0780037492.01.T01:CDS 25.0%
! GAACATAATTGGAAAGATTT+AGG - Chr7:26920287-26920306 MsG0780037492.01.T01:CDS 25.0%
!! ATGTTCATATTTGTTAACCA+TGG + Chr7:26919492-26919511 None:intergenic 25.0%
AAAACCAAAAGAGAAATGCA+AGG - Chr7:26920044-26920063 MsG0780037492.01.T01:CDS 30.0%
AAAGCAATGAACTTGTAAGA+GGG + Chr7:26920569-26920588 None:intergenic 30.0%
AACATATGTTCTGTGGTATT+AGG - Chr7:26919822-26919841 MsG0780037492.01.T01:CDS 30.0%
AAGCTTCATTGAGATGAAAA+TGG - Chr7:26920625-26920644 MsG0780037492.01.T01:CDS 30.0%
AGAATCTTAGCTTCAATCAA+AGG + Chr7:26920236-26920255 None:intergenic 30.0%
ATTATGAATGAAGTAGGAGA+TGG - Chr7:26920095-26920114 MsG0780037492.01.T01:CDS 30.0%
GTTGAATTATCACATTCAAG+TGG - Chr7:26920664-26920683 MsG0780037492.01.T01:CDS 30.0%
TACCATCAAGTGAACATAAT+TGG - Chr7:26920276-26920295 MsG0780037492.01.T01:CDS 30.0%
TTAGGTCTGATTCACATATT+TGG - Chr7:26919625-26919644 MsG0780037492.01.T01:CDS 30.0%
TTCCAATTATGTTCACTTGA+TGG + Chr7:26920281-26920300 None:intergenic 30.0%
! GATTTATGCTCAAAAGGTAT+CGG + Chr7:26920380-26920399 None:intergenic 30.0%
! TTCTTGGAGAAGGAATTTTT+AGG - Chr7:26919607-26919626 MsG0780037492.01.T01:CDS 30.0%
! TTGACCATGCTTCTAAAAAT+GGG - Chr7:26919754-26919773 MsG0780037492.01.T01:CDS 30.0%
! TTTCAAGCAGGAAAATTTTC+AGG - Chr7:26919677-26919696 MsG0780037492.01.T01:CDS 30.0%
! TTTTCGTTGCAATCCATTAT+TGG - Chr7:26919328-26919347 MsG0780037492.01.T01:CDS 30.0%
!! TGGCATTGGAGAAATATTTT+GGG - Chr7:26919296-26919315 MsG0780037492.01.T01:CDS 30.0%
!! TTGGCATTGGAGAAATATTT+TGG - Chr7:26919295-26919314 MsG0780037492.01.T01:CDS 30.0%
!!! AGAGAGATTTTTGAAGTTCT+TGG - Chr7:26919591-26919610 MsG0780037492.01.T01:CDS 30.0%
!!! ATTTTTGAAGTTCTTGGAGA+AGG - Chr7:26919597-26919616 MsG0780037492.01.T01:CDS 30.0%
AACAGAAAGACTTGGGATTA+TGG + Chr7:26920702-26920721 None:intergenic 35.0%
AAGTTCATTGCTTTCAATGC+TGG - Chr7:26920575-26920594 MsG0780037492.01.T01:CDS 35.0%
ACAGAAAGACTTGGGATTAT+GGG + Chr7:26920701-26920720 None:intergenic 35.0%
AGCACAAAGTTCGAAAACTA+CGG - Chr7:26919552-26919571 MsG0780037492.01.T01:CDS 35.0%
ATCTTAAGCCAAAACTCTTG+TGG - Chr7:26919934-26919953 MsG0780037492.01.T01:CDS 35.0%
CACAGAACATATGTTGTCAA+AGG + Chr7:26919817-26919836 None:intergenic 35.0%
CTTTGACAACATATGTTCTG+TGG - Chr7:26919815-26919834 MsG0780037492.01.T01:CDS 35.0%
GAAACACACCAATCACAAAA+TGG - Chr7:26919361-26919380 MsG0780037492.01.T01:CDS 35.0%
GAAAGCAATGAACTTGTAAG+AGG + Chr7:26920570-26920589 None:intergenic 35.0%
GAATTATCACATTCAAGTGG+TGG - Chr7:26920667-26920686 MsG0780037492.01.T01:CDS 35.0%
GCTTGGAATTTAAACCAGAA+AGG - Chr7:26920510-26920529 MsG0780037492.01.T01:CDS 35.0%
GGAAAGATTTAGGAGCAAAA+GGG - Chr7:26920297-26920316 MsG0780037492.01.T01:CDS 35.0%
GTAAGACAACAGAAAGACTT+GGG + Chr7:26920709-26920728 None:intergenic 35.0%
GTTGTCTTACACATGAAACA+TGG - Chr7:26920719-26920738 MsG0780037492.01.T01:CDS 35.0%
TCAATTAATCTACTTGCAGC+TGG - Chr7:26920155-26920174 MsG0780037492.01.T01:CDS 35.0%
TGGAAAGATTTAGGAGCAAA+AGG - Chr7:26920296-26920315 MsG0780037492.01.T01:CDS 35.0%
TGGAAGAGATACTATTAGCT+CGG - Chr7:26920175-26920194 MsG0780037492.01.T01:CDS 35.0%
TGGAATTTAAACCAGAAAGG+TGG - Chr7:26920513-26920532 MsG0780037492.01.T01:CDS 35.0%
TGTAAGACAACAGAAAGACT+TGG + Chr7:26920710-26920729 None:intergenic 35.0%
TGTGCAGATTTATGCTCAAA+AGG + Chr7:26920386-26920405 None:intergenic 35.0%
TTAACCATGGTCCTTCAAAA+AGG + Chr7:26919479-26919498 None:intergenic 35.0%
! AGCAAGTTAGTTTACCTACA+TGG - Chr7:26920323-26920342 MsG0780037492.01.T01:CDS 35.0%
! CTGCAAAATTGGTTTCAAGT+TGG - Chr7:26919960-26919979 MsG0780037492.01.T01:CDS 35.0%
! CTTGACCATGCTTCTAAAAA+TGG - Chr7:26919753-26919772 MsG0780037492.01.T01:CDS 35.0%
! TGACCATGCTTCTAAAAATG+GGG - Chr7:26919755-26919774 MsG0780037492.01.T01:CDS 35.0%
! TTGTCCTTGCATTTCTCTTT+TGG + Chr7:26920051-26920070 None:intergenic 35.0%
!! ACTTCACTCAATTTTCAAGC+AGG - Chr7:26919665-26919684 MsG0780037492.01.T01:CDS 35.0%
AAGTTCGAAAACTACGGGAA+AGG - Chr7:26919558-26919577 MsG0780037492.01.T01:CDS 40.0%
AATATGGGGAGAAGATTGCT+TGG - Chr7:26920493-26920512 MsG0780037492.01.T01:CDS 40.0%
ACACATGAAACATGGCTTGA+AGG - Chr7:26920727-26920746 MsG0780037492.01.T01:CDS 40.0%
CACAACGTATCCAACATTCA+CGG - Chr7:26919414-26919433 MsG0780037492.01.T01:CDS 40.0%
CCAACCAGAAAAACCAAGTA+AGG + Chr7:26920202-26920221 None:intergenic 40.0%
CTCTCTCACATGGAATTTCA+GGG + Chr7:26919878-26919897 None:intergenic 40.0%
CTTCACATAAAGCTCCATGT+AGG + Chr7:26920340-26920359 None:intergenic 40.0%
GCACAAAGTTCGAAAACTAC+GGG - Chr7:26919553-26919572 MsG0780037492.01.T01:CDS 40.0%
GGAAGAGATACTATTAGCTC+GGG - Chr7:26920176-26920195 MsG0780037492.01.T01:CDS 40.0%
GTCTACATAACCGTGAATGT+TGG + Chr7:26919427-26919446 None:intergenic 40.0%
GTGTATTCTCTATACTCCGT+CGG - Chr7:26920458-26920477 MsG0780037492.01.T01:CDS 40.0%
TCGTTGCAATCCATTATTGG+AGG - Chr7:26919331-26919350 MsG0780037492.01.T01:CDS 40.0%
TCTTGTGGAAGCTGCAAAAT+TGG - Chr7:26919949-26919968 MsG0780037492.01.T01:CDS 40.0%
TTCTGTTGAGCCTCCAATAA+TGG + Chr7:26919344-26919363 None:intergenic 40.0%
! ATTTGCTTCCTAGTGGACAT+AGG - Chr7:26920414-26920433 MsG0780037492.01.T01:CDS 40.0%
! GAAAGGTGGATTTCTCAGAA+AGG - Chr7:26920527-26920546 MsG0780037492.01.T01:CDS 40.0%
! GGAGGAACATTCCTTTTTGA+AGG - Chr7:26919465-26919484 MsG0780037492.01.T01:CDS 40.0%
! TTCTAAAAATGGGGTGCAAG+TGG - Chr7:26919764-26919783 MsG0780037492.01.T01:CDS 40.0%
! TTCTGAGAAATCCACCTTTC+TGG + Chr7:26920527-26920546 None:intergenic 40.0%
! TTTGCTTCCTAGTGGACATA+GGG - Chr7:26920415-26920434 MsG0780037492.01.T01:CDS 40.0%
!! AAACCTGATTTGCTTCCTAG+TGG - Chr7:26920407-26920426 MsG0780037492.01.T01:CDS 40.0%
!! CATTCCTTTTTGAAGGACCA+TGG - Chr7:26919472-26919491 MsG0780037492.01.T01:CDS 40.0%
!! CCTTACTTGGTTTTTCTGGT+TGG - Chr7:26920199-26920218 MsG0780037492.01.T01:CDS 40.0%
!! TTATGCTCAAAAGGTATCGG+CGG + Chr7:26920377-26920396 None:intergenic 40.0%
ACCAAGGAGTTGTTTGGGTA+AGG - Chr7:26920598-26920617 MsG0780037492.01.T01:CDS 45.0%
AGTGTAAAGGCTCTCTCACA+TGG + Chr7:26919888-26919907 None:intergenic 45.0%
ATCACAAAATGGCCTGTGCT+TGG - Chr7:26919372-26919391 MsG0780037492.01.T01:CDS 45.0%
ATTCTCTATACTCCGTCGGA+AGG - Chr7:26920462-26920481 MsG0780037492.01.T01:CDS 45.0%
CGGAGGACACATTGTTCATA+AGG - Chr7:26919910-26919929 MsG0780037492.01.T01:CDS 45.0%
GATACGTTGTGTAAGAGACC+AGG + Chr7:26919405-26919424 None:intergenic 45.0%
GCTCTCTCACATGGAATTTC+AGG + Chr7:26919879-26919898 None:intergenic 45.0%
GTGATGTGTTGCACGTTCTT+GGG + Chr7:26919531-26919550 None:intergenic 45.0%
TCCTTACCCAAACAACTCCT+TGG + Chr7:26920602-26920621 None:intergenic 45.0%
TGAGAGAGCCTTTACACTAG+CGG - Chr7:26919890-26919909 MsG0780037492.01.T01:CDS 45.0%
TGTCCACTAGGAAGCAAATC+AGG + Chr7:26920413-26920432 None:intergenic 45.0%
TGTGATGTGTTGCACGTTCT+TGG + Chr7:26919532-26919551 None:intergenic 45.0%
TTCTCTATACTCCGTCGGAA+GGG - Chr7:26920463-26920482 MsG0780037492.01.T01:CDS 45.0%
TTGCTTTCAATGCTGGACCA+AGG - Chr7:26920582-26920601 MsG0780037492.01.T01:CDS 45.0%
! AGGTGGATTTCTCAGAAAGG+AGG - Chr7:26920530-26920549 MsG0780037492.01.T01:CDS 45.0%
! GAGCTTTATGTGAAGCCTTG+AGG - Chr7:26920345-26920364 MsG0780037492.01.T01:CDS 45.0%
! GGTGGATTTCTCAGAAAGGA+GGG - Chr7:26920531-26920550 MsG0780037492.01.T01:CDS 45.0%
! TGCAGCTTCCACAAGAGTTT+TGG + Chr7:26919945-26919964 None:intergenic 45.0%
!! AGCACAGGCCATTTTGTGAT+TGG + Chr7:26919372-26919391 None:intergenic 45.0%
!! GCACCCCATTTTTAGAAGCA+TGG + Chr7:26919761-26919780 None:intergenic 45.0%
CGGAAGGGTGGAGGAAATAT+GGG - Chr7:26920478-26920497 MsG0780037492.01.T01:CDS 50.0%
CTATTAGCTCGGGCCTTACT+TGG - Chr7:26920186-26920205 MsG0780037492.01.T01:CDS 50.0%
GACTCAACCCTATGTCCACT+AGG + Chr7:26920425-26920444 None:intergenic 50.0%
GCTGGACCAAGGAGTTGTTT+GGG - Chr7:26920593-26920612 MsG0780037492.01.T01:CDS 50.0%
GGAAGGGTGGAGGAAATATG+GGG - Chr7:26920479-26920498 MsG0780037492.01.T01:CDS 50.0%
TATCGGCGGATAAAGCCTCA+AGG + Chr7:26920363-26920382 None:intergenic 50.0%
TATTTCCTCCACCCTTCCGA+CGG + Chr7:26920477-26920496 None:intergenic 50.0%
TCGGAAGGGTGGAGGAAATA+TGG - Chr7:26920477-26920496 MsG0780037492.01.T01:CDS 50.0%
TGCTGGACCAAGGAGTTGTT+TGG - Chr7:26920592-26920611 MsG0780037492.01.T01:CDS 50.0%
TGTGTCCTCCGCTAGTGTAA+AGG + Chr7:26919901-26919920 None:intergenic 50.0%
TTGCACGTTCTTGGGATCAC+TGG + Chr7:26919523-26919542 None:intergenic 50.0%
!! CGGGCCTTACTTGGTTTTTC+TGG - Chr7:26920195-26920214 MsG0780037492.01.T01:CDS 50.0%
CCAGGTAGCATTCCAAGCAC+AGG + Chr7:26919387-26919406 None:intergenic 55.0%
CCTGTGCTTGGAATGCTACC+TGG - Chr7:26919384-26919403 MsG0780037492.01.T01:CDS 55.0%
GAGAGCCTTTACACTAGCGG+AGG - Chr7:26919893-26919912 MsG0780037492.01.T01:CDS 55.0%
TCTATACTCCGTCGGAAGGG+TGG - Chr7:26920466-26920485 MsG0780037492.01.T01:CDS 55.0%
ATACTCCGTCGGAAGGGTGG+AGG - Chr7:26920469-26920488 MsG0780037492.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 26919285 26920775 26919285 ID=MsG0780037492.01;Name=MsG0780037492.01
Chr7 mRNA 26919285 26920775 26919285 ID=MsG0780037492.01.T01;Parent=MsG0780037492.01;Name=MsG0780037492.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|496
Chr7 exon 26919285 26920775 26919285 ID=MsG0780037492.01.T01:exon:12461;Parent=MsG0780037492.01.T01
Chr7 CDS 26919285 26920775 26919285 ID=MsG0780037492.01.T01:cds;Parent=MsG0780037492.01.T01
Gene Sequence

>MsG0780037492.01.T01

ATGTATGTGTTTGGCATTGGAGAAATATTTTGGGCAGTTCTTGTTTTCGTTGCAATCCATTATTGGAGGCTCAACAGAAACACACCAATCACAAAATGGCCTGTGCTTGGAATGCTACCTGGTCTCTTACACAACGTATCCAACATTCACGGTTATGTAGACATAACTTTAAAACAAAATGGAGGAACATTCCTTTTTGAAGGACCATGGTTAACAAATATGAACATGGTGTGCACCAGTGATCCCAAGAACGTGCAACACATCACAAGCACAAAGTTCGAAAACTACGGGAAAGGAAACGATTTCAGAGAGATTTTTGAAGTTCTTGGAGAAGGAATTTTTAGGTCTGATTCACATATTTGGAAGTACAACAGAAAGCTACTTCACTCAATTTTCAAGCAGGAAAATTTTCAGGTATTTATTCAAAAAACCGTTGAGAAAAAAATTTGTAACTATCTTCTTGTATTTCTTGACCATGCTTCTAAAAATGGGGTGCAAGTGGATTTGCAAGATATTTTTCAAAGGTTAACCTTTGACAACATATGTTCTGTGGTATTAGGATTTGATCCTAAATGTCTTTCTATTGATCTCCCTGAAATTCCATGTGAGAGAGCCTTTACACTAGCGGAGGACACATTGTTCATAAGGCATCTTAAGCCAAAACTCTTGTGGAAGCTGCAAAATTGGTTTCAAGTTGGTGAAGAGAAACAATTTATAAAGAATAATAAATTTATTGATGAAATGTTGTATTCAGAAATCAAAACCAAAAGAGAAATGCAAGGACAACAAAAATTTGACTTGCTAAATATCATTATGAATGAAGTAGGAGATGGAGAAAATCTAATAGATGACAAGTTTTTGAGAGATACATCAATTAATCTACTTGCAGCTGGAAGAGATACTATTAGCTCGGGCCTTACTTGGTTTTTCTGGTTGGTTGCGACGCATCCTTTGATTGAAGCTAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGTGAACATAATTGGAAAGATTTAGGAGCAAAAGGGTTTAGCAAGTTAGTTTACCTACATGGAGCTTTATGTGAAGCCTTGAGGCTTTATCCGCCGATACCTTTTGAGCATAAATCTGCACAGAAACCTGATTTGCTTCCTAGTGGACATAGGGTTGAGTCAAACACAATGATAGTGTATTCTCTATACTCCGTCGGAAGGGTGGAGGAAATATGGGGAGAAGATTGCTTGGAATTTAAACCAGAAAGGTGGATTTCTCAGAAAGGAGGGATAGTTCATGTTCCCTCTTACAAGTTCATTGCTTTCAATGCTGGACCAAGGAGTTGTTTGGGTAAGGATATAAGCTTCATTGAGATGAAAATGGTTGCTGTAGCAATATTGTTGAATTATCACATTCAAGTGGTGGAAGATCATCCCATAATCCCAAGTCTTTCTGTTGTCTTACACATGAAACATGGCTTGAAGGTTAATCTCAAAAAAAGAAGCATTTAA

Protein sequence

>MsG0780037492.01.T01

MYVFGIGEIFWAVLVFVAIHYWRLNRNTPITKWPVLGMLPGLLHNVSNIHGYVDITLKQNGGTFLFEGPWLTNMNMVCTSDPKNVQHITSTKFENYGKGNDFREIFEVLGEGIFRSDSHIWKYNRKLLHSIFKQENFQVFIQKTVEKKICNYLLVFLDHASKNGVQVDLQDIFQRLTFDNICSVVLGFDPKCLSIDLPEIPCERAFTLAEDTLFIRHLKPKLLWKLQNWFQVGEEKQFIKNNKFIDEMLYSEIKTKREMQGQQKFDLLNIIMNEVGDGENLIDDKFLRDTSINLLAAGRDTISSGLTWFFWLVATHPLIEAKILEEIKENLPSSEHNWKDLGAKGFSKLVYLHGALCEALRLYPPIPFEHKSAQKPDLLPSGHRVESNTMIVYSLYSVGRVEEIWGEDCLEFKPERWISQKGGIVHVPSYKFIAFNAGPRSCLGKDISFIEMKMVAVAILLNYHIQVVEDHPIIPSLSVVLHMKHGLKVNLKKRSI*