AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030329.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030329.01.T01 MTR_6g004630 98.280 465 8 0 1 465 41 505 0.0 947
MsG0680030329.01.T01 MTR_6g004610 90.260 462 45 0 1 462 1 462 0.0 882
MsG0680030329.01.T01 MTR_6g004670 83.656 465 73 3 1 463 42 505 0.0 813
MsG0680030329.01.T01 MTR_6g004600 66.667 477 146 5 1 465 42 517 0.0 646
MsG0680030329.01.T01 MTR_6g004590 66.457 477 147 4 1 465 42 517 0.0 642
MsG0680030329.01.T01 MTR_8g088470 57.511 466 189 4 1 464 34 492 0.0 552
MsG0680030329.01.T01 MTR_7g033580 56.009 466 197 4 1 465 38 496 0.0 536
MsG0680030329.01.T01 MTR_7g033570 56.867 466 193 4 1 465 38 496 0.0 536
MsG0680030329.01.T01 MTR_1g036200 52.401 479 201 8 1 465 36 501 1.30e-169 487
MsG0680030329.01.T01 MTR_1g035790 52.008 473 213 7 1 465 38 504 4.47e-168 483
MsG0680030329.01.T01 MTR_1g035670 49.893 469 228 4 1 465 39 504 1.18e-167 482
MsG0680030329.01.T01 MTR_1g035750 50.529 473 223 5 1 465 38 507 7.30e-165 475
MsG0680030329.01.T01 MTR_1g036130 48.832 471 234 4 1 465 39 508 6.82e-162 467
MsG0680030329.01.T01 MTR_1g035760 49.041 469 209 5 1 465 39 481 1.69e-160 463
MsG0680030329.01.T01 MTR_1g050362 49.684 475 223 8 1 463 36 506 3.51e-160 463
MsG0680030329.01.T01 MTR_1g035580 49.263 475 218 7 1 465 37 498 5.04e-158 457
MsG0680030329.01.T01 MTR_1g036010 48.632 475 230 8 1 465 39 509 1.85e-157 456
MsG0680030329.01.T01 MTR_1g035940 48.632 475 229 9 2 465 39 509 3.41e-157 455
MsG0680030329.01.T01 MTR_1g035800 49.790 476 225 6 1 463 38 512 3.35e-156 453
MsG0680030329.01.T01 MTR_1g035830 48.626 473 233 7 1 465 39 509 7.17e-156 452
MsG0680030329.01.T01 MTR_1g036270 47.699 478 235 7 1 465 38 513 1.52e-155 451
MsG0680030329.01.T01 MTR_1g069715 49.752 404 191 6 47 440 1 402 1.08e-140 419
MsG0680030329.01.T01 MTR_1g035860 48.166 409 205 4 1 405 45 450 8.12e-137 403
MsG0680030329.01.T01 MTR_1g037560 39.655 464 264 6 12 463 84 543 9.69e-121 364
MsG0680030329.01.T01 MTR_1g037550 37.397 484 275 8 4 463 68 547 9.52e-111 338
MsG0680030329.01.T01 MTR_4g075110 37.526 477 279 8 2 464 79 550 5.87e-108 331
MsG0680030329.01.T01 MTR_8g030590 37.500 488 274 11 2 465 32 512 4.67e-106 325
MsG0680030329.01.T01 MTR_8g098435 35.744 484 283 10 2 465 32 507 2.47e-98 305
MsG0680030329.01.T01 MTR_5g070010 36.345 476 274 9 8 465 46 510 3.03e-97 302
MsG0680030329.01.T01 MTR_4g012320 60.748 214 83 1 253 465 12 225 1.93e-91 277
MsG0680030329.01.T01 MTR_3g080580 34.029 479 289 8 2 463 49 517 4.53e-90 284
MsG0680030329.01.T01 MTR_3g463060 34.737 475 283 9 3 465 45 504 8.63e-90 283
MsG0680030329.01.T01 MTR_7g096340 33.641 434 261 9 41 463 85 502 7.88e-86 272
MsG0680030329.01.T01 MTR_7g096320 33.102 432 266 8 41 463 86 503 6.38e-83 265
MsG0680030329.01.T01 MTR_7g029275 33.047 466 284 9 11 463 58 508 6.57e-83 265
MsG0680030329.01.T01 MTR_7g088330 33.537 492 273 16 2 463 41 508 2.99e-80 258
MsG0680030329.01.T01 MTR_1g070365 32.791 430 267 9 43 463 88 504 2.90e-79 255
MsG0680030329.01.T01 MTR_4g119660 31.902 489 294 10 3 463 38 515 4.15e-79 255
MsG0680030329.01.T01 MTR_1g060550 34.332 434 260 9 41 463 93 512 4.80e-79 255
MsG0680030329.01.T01 MTR_4g054920 31.545 466 285 11 14 463 69 516 1.16e-78 254
MsG0680030329.01.T01 MTR_1g070345 33.333 432 264 11 43 464 88 505 2.70e-78 253
MsG0680030329.01.T01 MTR_2g086040 31.429 455 289 8 12 463 64 498 1.21e-77 251
MsG0680030329.01.T01 MTR_5g019140 31.633 490 296 10 3 464 53 531 2.01e-77 251
MsG0680030329.01.T01 MTR_8g035860 33.333 447 272 12 6 439 51 484 2.37e-77 250
MsG0680030329.01.T01 MTR_1g102220 29.832 476 303 11 2 463 48 506 5.63e-76 246
MsG0680030329.01.T01 MTR_8g035780 35.802 405 233 10 41 429 82 475 9.61e-76 246
MsG0680030329.01.T01 MTR_8g035810 32.662 447 276 12 6 439 51 485 5.69e-75 244
MsG0680030329.01.T01 MTR_8g035820 33.557 447 271 12 6 439 51 484 8.94e-75 243
MsG0680030329.01.T01 MTR_7g406990 37.574 338 192 8 12 338 67 396 4.63e-69 227
MsG0680030329.01.T01 MTR_8g035680 26.964 471 315 11 6 463 58 512 4.17e-65 218
MsG0680030329.01.T01 MTR_8g035760 27.813 471 312 12 6 464 58 512 4.76e-64 215
MsG0680030329.01.T01 MTR_8g035810 32.203 413 255 12 6 405 51 451 2.26e-63 212
MsG0680030329.01.T01 MTR_8g035680 27.247 356 237 7 120 463 20 365 2.42e-50 175
MsG0680030329.01.T01 MTR_1g102210 28.869 336 198 6 129 455 49 352 2.80e-44 159
MsG0680030329.01.T01 MTR_1g070370 35.317 252 147 5 132 381 5 242 1.34e-43 154
MsG0680030329.01.T01 MTR_8g035810 30.904 343 215 10 6 336 51 383 1.37e-43 158
MsG0680030329.01.T01 MTR_7g079440 24.494 445 298 15 35 463 226 648 5.88e-31 126
MsG0680030329.01.T01 MTR_6g004570 63.462 104 27 3 202 294 1 104 1.25e-30 119
MsG0680030329.01.T01 MTR_6g084040 41.497 147 66 3 1 146 38 165 1.50e-29 114
MsG0680030329.01.T01 MTR_1g040110 47.321 112 56 1 88 196 56 167 1.92e-27 108
MsG0680030329.01.T01 MTR_5g009110 24.416 471 303 14 35 463 111 570 1.24e-26 113
MsG0680030329.01.T01 MTR_1g050590 44.538 119 63 2 209 326 2 118 3.50e-26 102
MsG0680030329.01.T01 MTR_7g079440 26.230 366 234 13 35 386 226 569 1.30e-24 107
MsG0680030329.01.T01 MTR_1g062190 23.636 440 301 13 39 463 120 539 8.84e-24 104
MsG0680030329.01.T01 MTR_5g009110 24.018 433 276 14 73 463 1 422 6.65e-23 100
MsG0680030329.01.T01 MTR_2g062670 34.320 169 99 3 130 297 66 223 1.86e-22 100
MsG0680030329.01.T01 MTR_1g101050 28.626 262 171 8 192 448 248 498 4.01e-22 99.4
MsG0680030329.01.T01 MTR_2g010250 27.444 266 186 6 204 463 241 505 4.68e-22 99.4
MsG0680030329.01.T01 MTR_1g101040 28.788 264 170 7 192 452 252 500 5.37e-22 99.0
MsG0680030329.01.T01 MTR_6g072490 29.600 250 160 7 204 448 262 500 1.09e-21 98.2
MsG0680030329.01.T01 MTR_7g006900 28.270 237 151 8 217 448 237 459 2.96e-21 96.7
MsG0680030329.01.T01 MTR_6g017325 28.696 230 148 7 217 443 273 489 3.56e-21 96.7
MsG0680030329.01.T01 MTR_2g010380 28.000 250 172 6 221 463 261 509 4.10e-21 96.3
MsG0680030329.01.T01 MTR_2g010330 24.433 397 265 11 84 463 129 507 7.49e-21 95.5
MsG0680030329.01.T01 MTR_2g061200 22.410 415 274 12 73 462 137 528 3.15e-20 94.0
MsG0680030329.01.T01 MTR_2g010290 29.389 262 164 9 218 463 276 532 3.16e-20 94.0
MsG0680030329.01.T01 MTR_5g009110 26.807 332 219 9 35 352 111 432 6.31e-20 92.4
MsG0680030329.01.T01 MTR_4g095050 25.589 297 202 7 131 424 173 453 1.24e-19 92.0
MsG0680030329.01.T01 MTR_6g008500 27.039 233 159 7 192 418 258 485 1.33e-19 92.0
MsG0680030329.01.T01 MTR_8g098565 27.437 277 167 9 218 463 233 506 1.38e-19 91.7
MsG0680030329.01.T01 MTR_5g070920 25.105 239 168 5 193 424 225 459 1.82e-19 91.3
MsG0680030329.01.T01 MTR_6g084900 25.100 251 163 6 202 442 1 236 2.77e-19 88.2
MsG0680030329.01.T01 MTR_4g113650 22.791 430 295 11 34 452 101 504 2.97e-19 90.9
MsG0680030329.01.T01 MTR_2g010320 28.226 248 164 6 225 463 261 503 2.98e-19 90.5
MsG0680030329.01.T01 MTR_0171s0030 26.459 257 175 8 187 436 139 388 3.56e-19 89.7
MsG0680030329.01.T01 MTR_5g034900 29.500 200 137 3 267 463 319 517 4.18e-19 90.1
MsG0680030329.01.T01 MTR_0025s0110 22.222 459 304 13 12 452 88 511 6.10e-19 89.7
MsG0680030329.01.T01 MTR_8g046580 39.216 102 59 2 338 438 193 292 6.47e-19 87.4
MsG0680030329.01.T01 MTR_4g089055 23.753 421 290 12 4 413 60 460 1.41e-18 88.6
MsG0680030329.01.T01 MTR_4g088195 26.148 283 188 9 177 445 208 483 1.47e-18 88.6
MsG0680030329.01.T01 MTR_1g015860 29.020 255 160 10 217 463 287 528 2.62e-18 87.8
MsG0680030329.01.T01 MTR_0147s0030 23.829 491 269 21 13 452 92 528 2.89e-18 87.8
MsG0680030329.01.T01 MTR_6g008530 26.639 244 164 6 197 432 257 493 3.34e-18 87.4
MsG0680030329.01.T01 MTR_7g012860 27.200 250 162 8 197 439 235 471 3.35e-18 87.4
MsG0680030329.01.T01 MTR_0287s0060 27.200 250 162 8 197 439 235 471 3.35e-18 87.4
MsG0680030329.01.T01 MTR_2g061750 29.255 188 110 5 38 207 12 194 4.81e-18 82.8
MsG0680030329.01.T01 MTR_4g088160 24.066 482 277 19 4 442 40 475 5.42e-18 87.0
MsG0680030329.01.T01 MTR_2g061740 29.255 188 110 5 38 207 12 194 5.73e-18 82.8
MsG0680030329.01.T01 MTR_8g042060 27.372 274 166 12 207 462 265 523 8.10e-18 86.3
MsG0680030329.01.T01 MTR_1g036140 44.565 92 49 1 212 303 69 158 8.32e-18 81.3
MsG0680030329.01.T01 MTR_2g010280 29.703 202 136 4 267 463 303 503 8.88e-18 86.3
MsG0680030329.01.T01 MTR_8g042060 27.372 274 166 12 207 462 229 487 9.02e-18 85.9
MsG0680030329.01.T01 MTR_7g012330 27.523 218 139 7 228 439 266 470 1.19e-17 85.9
MsG0680030329.01.T01 MTR_2g055430 22.059 476 313 18 10 465 81 518 1.27e-17 85.9
MsG0680030329.01.T01 MTR_3g025260 25.610 246 164 8 192 427 231 467 1.55e-17 85.5
MsG0680030329.01.T01 MTR_8g008530 28.037 214 139 4 254 462 315 518 1.71e-17 85.5
MsG0680030329.01.T01 MTR_2g072400 22.851 477 305 19 10 462 78 515 2.08e-17 85.1
MsG0680030329.01.T01 MTR_0181s0030 22.395 451 323 15 3 441 41 476 2.80e-17 84.7
MsG0680030329.01.T01 MTR_4g094775 24.615 325 224 9 108 429 147 453 2.85e-17 84.7
MsG0680030329.01.T01 MTR_8g104030 24.031 258 173 7 197 442 8 254 3.12e-17 82.4
MsG0680030329.01.T01 MTR_0171s0020 22.895 380 275 11 57 429 101 469 3.15e-17 84.3
MsG0680030329.01.T01 MTR_3g104560 27.755 245 160 8 226 463 167 401 3.42e-17 83.6
MsG0680030329.01.T01 MTR_3g093530 26.068 234 157 6 235 462 300 523 4.96e-17 84.0
MsG0680030329.01.T01 MTR_4g018800 22.727 308 229 7 130 432 186 489 5.89e-17 83.6
MsG0680030329.01.T01 MTR_3g104560 27.755 245 160 8 226 463 302 536 6.82e-17 83.6
MsG0680030329.01.T01 MTR_5g470730 24.878 205 143 4 193 389 225 426 7.21e-17 82.8
MsG0680030329.01.T01 MTR_8g042000 19.463 447 298 14 34 455 107 516 8.41e-17 83.2
MsG0680030329.01.T01 MTR_5g070830 23.643 258 180 6 193 442 335 583 8.44e-17 83.6
MsG0680030329.01.T01 MTR_6g008600 25.514 243 167 6 197 432 256 491 9.83e-17 83.2
MsG0680030329.01.T01 MTR_4g088170 25.606 289 182 10 177 444 208 484 9.94e-17 82.8
MsG0680030329.01.T01 MTR_8g104100 24.348 230 150 7 213 429 4 222 1.69e-16 79.7
MsG0680030329.01.T01 MTR_6g008620 26.786 224 156 6 192 411 249 468 2.00e-16 82.0
MsG0680030329.01.T01 MTR_5g070710 23.950 238 169 5 193 423 224 456 2.01e-16 82.0
MsG0680030329.01.T01 MTR_4g062510 24.024 333 222 9 144 452 175 500 2.64e-16 81.6
MsG0680030329.01.T01 MTR_1g023730 24.779 226 159 5 209 432 259 475 2.79e-16 81.6
MsG0680030329.01.T01 MTR_5g016410 25.589 297 201 9 131 424 170 449 3.08e-16 81.3
MsG0680030329.01.T01 MTR_4g077210 26.432 227 156 5 192 417 235 451 3.17e-16 81.3
MsG0680030329.01.T01 MTR_5g009110 26.531 294 192 9 73 352 1 284 3.45e-16 79.7
MsG0680030329.01.T01 MTR_2g055470 22.222 459 303 19 10 448 81 505 4.71e-16 80.9
MsG0680030329.01.T01 MTR_6g084770 23.438 256 171 6 197 439 233 476 4.78e-16 80.9
MsG0680030329.01.T01 MTR_7g103450 25.610 246 173 5 188 432 245 481 5.19e-16 80.9
MsG0680030329.01.T01 MTR_4g109470 23.529 391 254 15 73 442 111 477 6.28e-16 80.5
MsG0680030329.01.T01 MTR_5g094660 22.173 451 316 17 4 439 40 470 6.88e-16 80.5
MsG0680030329.01.T01 MTR_5g070690 23.673 245 175 5 193 429 223 463 6.93e-16 80.5
MsG0680030329.01.T01 MTR_5g070800 23.673 245 175 5 193 429 223 463 6.93e-16 80.5
MsG0680030329.01.T01 MTR_1g069200 24.370 238 173 4 204 441 260 490 7.48e-16 80.1
MsG0680030329.01.T01 MTR_4g071710 25.191 262 169 7 200 442 234 487 7.80e-16 80.1
MsG0680030329.01.T01 MTR_6g008430 25.197 254 173 9 192 439 245 487 1.01e-15 79.7
MsG0680030329.01.T01 MTR_6g008650 25.403 248 176 6 190 432 246 489 1.07e-15 79.7
MsG0680030329.01.T01 MTR_8g063280 25.000 256 178 7 217 463 248 498 1.10e-15 79.7
MsG0680030329.01.T01 MTR_6g008640 23.810 315 219 10 129 432 183 487 1.77e-15 79.0
MsG0680030329.01.T01 MTR_7g092600 21.134 388 242 9 81 429 111 473 1.90e-15 79.0
MsG0680030329.01.T01 MTR_2g062680 30.612 147 70 3 247 389 19 137 2.05e-15 75.1
MsG0680030329.01.T01 MTR_8g042020 23.188 276 197 7 194 462 255 522 2.41e-15 78.6
MsG0680030329.01.T01 MTR_1g091003 25.751 233 157 7 202 432 241 459 2.55e-15 78.6
MsG0680030329.01.T01 MTR_3g014880 25.506 247 174 7 192 432 248 490 2.83e-15 78.6
MsG0680030329.01.T01 MTR_0171s0010 23.873 377 241 15 75 429 119 471 2.98e-15 78.6
MsG0680030329.01.T01 MTR_1g103670 25.112 223 149 7 198 417 239 446 3.24e-15 78.2
MsG0680030329.01.T01 MTR_8g042040 26.515 264 164 10 207 462 265 506 3.25e-15 78.2
MsG0680030329.01.T01 MTR_2g010300 27.723 202 126 5 267 463 303 489 3.67e-15 78.2
MsG0680030329.01.T01 MTR_5g070700 24.793 242 164 7 193 423 225 459 3.72e-15 78.2
MsG0680030329.01.T01 MTR_3g025230 24.771 327 212 12 130 439 168 477 3.73e-15 78.2
MsG0680030329.01.T01 MTR_7g075610 26.316 247 162 6 202 442 245 477 3.85e-15 78.2
MsG0680030329.01.T01 MTR_4g089020 22.931 423 291 14 4 413 38 438 5.07e-15 77.4
MsG0680030329.01.T01 MTR_2g073480 28.780 205 130 7 219 418 170 363 5.58e-15 77.0
MsG0680030329.01.T01 MTR_4g088400 27.092 251 171 6 192 439 250 491 6.45e-15 77.4
MsG0680030329.01.T01 MTR_2g073440 30.097 206 124 8 219 417 237 429 8.96e-15 76.6
MsG0680030329.01.T01 MTR_5g091760 25.338 296 187 10 140 432 183 447 1.06e-14 76.6
MsG0680030329.01.T01 MTR_1g085680 20.915 459 287 16 34 460 99 513 1.20e-14 76.6
MsG0680030329.01.T01 MTR_5g007450 26.291 213 146 5 230 442 270 471 1.30e-14 76.3
MsG0680030329.01.T01 MTR_7g055793 28.837 215 129 7 251 452 263 466 1.46e-14 75.9
MsG0680030329.01.T01 MTR_7g028020 23.925 372 239 15 78 429 116 463 2.04e-14 75.9
MsG0680030329.01.T01 MTR_2g437840 24.742 291 199 7 131 418 170 443 2.07e-14 75.9
MsG0680030329.01.T01 MTR_7g055793 28.837 215 129 7 251 452 318 521 2.21e-14 75.9
MsG0680030329.01.T01 MTR_5g094550 23.735 257 177 8 189 439 228 471 2.25e-14 75.5
MsG0680030329.01.T01 MTR_7g075580 23.214 448 305 16 16 442 47 476 2.85e-14 75.1
MsG0680030329.01.T01 MTR_5g007460 26.009 223 153 5 213 432 227 440 2.87e-14 75.1
MsG0680030329.01.T01 MTR_5g070850 24.372 398 250 16 54 424 87 460 3.57e-14 75.1
MsG0680030329.01.T01 MTR_3g436390 25.641 234 162 6 193 422 231 456 3.92e-14 74.7
MsG0680030329.01.T01 MTR_7g079440 25.725 276 177 10 35 297 226 486 4.19e-14 74.7
MsG0680030329.01.T01 MTR_4g104610 27.027 185 128 4 229 413 269 446 4.49e-14 74.7
MsG0680030329.01.T01 MTR_8g027040 25.551 227 152 7 210 432 298 511 4.86e-14 74.7
MsG0680030329.01.T01 MTR_4g048580 22.652 362 253 11 74 429 121 461 5.44e-14 74.3
MsG0680030329.01.T01 MTR_3g024520 24.159 327 214 12 130 439 168 477 7.52e-14 73.9
MsG0680030329.01.T01 MTR_7g098550 24.034 466 276 18 10 444 70 488 9.37e-14 73.6
MsG0680030329.01.T01 MTR_7g098550 24.017 458 278 17 10 444 70 480 9.87e-14 73.6
MsG0680030329.01.T01 MTR_4g078110 24.887 221 158 5 220 439 235 448 1.13e-13 73.2
MsG0680030329.01.T01 MTR_7g027960 26.296 270 173 11 177 429 203 463 1.24e-13 73.2
MsG0680030329.01.T01 MTR_1g091010 27.513 189 123 6 231 417 267 443 1.48e-13 73.2
MsG0680030329.01.T01 MTR_1g091023 25.490 204 138 6 231 432 268 459 1.66e-13 72.8
MsG0680030329.01.T01 MTR_8g035790 34.694 98 62 2 367 463 1 97 1.72e-13 67.0
MsG0680030329.01.T01 MTR_6g042610 23.125 320 219 12 130 434 178 485 1.94e-13 72.8
MsG0680030329.01.T01 MTR_8g076290 23.932 234 160 8 192 413 223 450 1.99e-13 72.8
MsG0680030329.01.T01 MTR_1g031700 21.429 350 243 13 78 417 119 446 2.44e-13 72.4
MsG0680030329.01.T01 MTR_4g104540 28.571 161 110 3 253 413 221 376 2.83e-13 72.0
MsG0680030329.01.T01 MTR_1g037370 28.495 186 122 6 235 418 268 444 2.97e-13 72.0
MsG0680030329.01.T01 MTR_4g104570 30.000 150 100 3 264 413 1 145 3.30e-13 68.9
MsG0680030329.01.T01 MTR_4g088420 27.684 177 123 3 264 439 31 203 5.32e-13 68.9
MsG0680030329.01.T01 MTR_4g026200 23.868 243 175 6 199 441 237 469 6.06e-13 71.2
MsG0680030329.01.T01 MTR_5g007550 25.123 203 141 5 230 432 270 461 6.84e-13 70.9
MsG0680030329.01.T01 MTR_1g031710 26.733 202 129 8 217 417 67 250 9.50e-13 69.3
MsG0680030329.01.T01 MTR_2g031920 25.419 358 232 16 112 463 159 487 1.34e-12 70.1
MsG0680030329.01.T01 MTR_8g469360 26.639 244 158 7 224 452 184 421 1.66e-12 69.3
MsG0680030329.01.T01 MTR_4g025980 28.251 223 150 5 222 441 254 469 2.11e-12 69.3
MsG0680030329.01.T01 MTR_4g133750 23.457 243 169 6 207 442 245 477 2.36e-12 69.3
MsG0680030329.01.T01 MTR_4g088425 26.295 251 174 6 192 439 233 475 2.43e-12 69.3
MsG0680030329.01.T01 MTR_4g026030 24.254 268 186 9 178 441 63 317 3.08e-12 68.2
MsG0680030329.01.T01 MTR_4g088405 29.947 187 126 3 254 439 223 405 5.43e-12 67.8
MsG0680030329.01.T01 MTR_8g080520 22.543 346 244 11 126 464 198 526 5.54e-12 68.2
MsG0680030329.01.T01 MTR_8g469300 24.031 258 186 7 187 440 227 478 6.23e-12 68.2
MsG0680030329.01.T01 MTR_1750s0010 27.815 151 104 3 263 413 1 146 9.54e-12 63.5
MsG0680030329.01.T01 MTR_7g075540 21.978 455 294 15 16 439 47 471 9.87e-12 67.4
MsG0680030329.01.T01 MTR_5g018980 25.000 244 162 7 197 429 233 466 1.09e-11 67.4
MsG0680030329.01.T01 MTR_3g057970 24.797 246 162 8 192 429 222 452 3.10e-11 65.9
MsG0680030329.01.T01 MTR_3g058110 23.922 255 182 7 192 439 227 476 3.30e-11 65.9
MsG0680030329.01.T01 MTR_5g095290 22.353 255 180 7 191 439 229 471 3.97e-11 65.5
MsG0680030329.01.T01 MTR_6g035115 28.070 171 108 5 257 423 291 450 4.70e-11 65.1
MsG0680030329.01.T01 MTR_4g026080 25.989 177 124 4 264 439 1 171 5.80e-11 62.4
MsG0680030329.01.T01 MTR_1g097220 23.237 241 168 8 230 463 298 528 5.87e-11 65.1
MsG0680030329.01.T01 MTR_3g057980 23.182 220 145 6 212 422 246 450 5.96e-11 64.7
MsG0680030329.01.T01 MTR_3g058000 22.179 257 184 6 192 439 227 476 6.08e-11 64.7
MsG0680030329.01.T01 MTR_0608s0010 22.105 285 182 9 78 354 119 371 6.41e-11 64.3
MsG0680030329.01.T01 MTR_5g072980 21.149 383 259 15 75 439 116 473 6.49e-11 64.7
MsG0680030329.01.T01 MTR_5g072930 21.149 383 259 15 75 439 116 473 6.49e-11 64.7
MsG0680030329.01.T01 MTR_1g035660 33.613 119 60 5 120 235 17 119 7.17e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030329.01.T01 AT2G23180 45.666 473 247 4 1 464 42 513 1.23e-150 439
MsG0680030329.01.T01 AT4G39480 45.064 466 244 4 9 463 49 513 6.05e-147 429
MsG0680030329.01.T01 AT4G39490 46.122 477 242 4 1 463 41 516 2.46e-146 428
MsG0680030329.01.T01 AT4G39500 44.492 472 247 6 1 463 1 466 1.56e-144 422
MsG0680030329.01.T01 AT4G32170 44.111 467 254 4 1 463 40 503 3.89e-144 422
MsG0680030329.01.T01 AT4G39500 44.492 472 247 6 1 463 51 516 1.23e-143 421
MsG0680030329.01.T01 AT1G47620 44.776 469 251 4 1 463 49 515 8.02e-143 419
MsG0680030329.01.T01 AT2G21910 43.617 470 255 5 1 463 40 506 2.54e-139 410
MsG0680030329.01.T01 AT4G39510 44.374 471 249 6 1 463 40 505 9.40e-136 400
MsG0680030329.01.T01 AT5G52320 40.685 467 265 4 1 462 42 501 3.41e-133 394
MsG0680030329.01.T01 AT1G57750 41.631 466 259 4 1 463 41 496 1.41e-131 390
MsG0680030329.01.T01 AT5G52320 40.476 462 263 4 1 457 42 496 7.93e-131 388
MsG0680030329.01.T01 AT1G65340 40.171 468 267 4 1 462 42 502 1.91e-129 384
MsG0680030329.01.T01 AT5G02900 41.263 475 241 8 1 463 31 479 7.26e-120 359
MsG0680030329.01.T01 AT5G23190 36.910 466 277 7 12 465 82 542 2.87e-110 337
MsG0680030329.01.T01 AT1G63710 36.570 484 281 8 2 465 32 509 5.78e-107 327
MsG0680030329.01.T01 AT1G01600 37.090 488 279 9 2 465 32 515 1.12e-105 325
MsG0680030329.01.T01 AT1G24540 36.920 474 285 6 2 464 51 521 1.35e-105 324
MsG0680030329.01.T01 AT4G00360 37.037 486 280 9 2 465 32 513 8.72e-104 320
MsG0680030329.01.T01 AT5G08250 35.729 487 281 10 2 465 3 480 8.88e-104 318
MsG0680030329.01.T01 AT5G08250 35.729 487 281 10 2 465 65 542 2.70e-103 319
MsG0680030329.01.T01 AT1G57750 40.102 394 223 4 1 391 41 424 1.55e-102 313
MsG0680030329.01.T01 AT3G26125 36.421 475 279 6 12 465 62 534 1.23e-101 314
MsG0680030329.01.T01 AT2G45970 36.140 487 282 10 2 465 32 512 2.46e-101 313
MsG0680030329.01.T01 AT5G58860 36.575 473 277 8 5 463 45 508 2.64e-97 302
MsG0680030329.01.T01 AT1G13140 35.991 464 285 5 12 465 65 526 1.29e-95 298
MsG0680030329.01.T01 AT1G13150 35.197 483 290 6 4 465 39 519 9.90e-94 293
MsG0680030329.01.T01 AT1G13140 35.358 461 266 7 12 465 65 500 4.46e-92 288
MsG0680030329.01.T01 AT3G56630 33.895 475 288 12 4 463 35 498 1.37e-85 271
MsG0680030329.01.T01 AT1G34540 33.833 467 289 10 5 463 43 497 1.53e-85 271
MsG0680030329.01.T01 AT5G63450 34.491 432 263 6 41 464 84 503 1.00e-84 270
MsG0680030329.01.T01 AT2G27690 32.026 459 291 7 12 464 52 495 1.55e-84 268
MsG0680030329.01.T01 AT3G48520 31.897 464 295 6 8 464 51 500 2.86e-84 268
MsG0680030329.01.T01 AT5G63450 34.491 432 263 6 41 464 142 561 5.40e-84 269
MsG0680030329.01.T01 AT2G45510 32.548 467 288 12 2 455 47 499 4.31e-79 255
MsG0680030329.01.T01 AT2G44890 32.334 467 289 12 2 455 47 499 1.52e-75 246
MsG0680030329.01.T01 AT1G69500 31.412 503 286 12 3 463 38 523 2.38e-74 243
MsG0680030329.01.T01 AT3G01900 30.444 473 297 10 2 464 41 491 4.22e-71 234
MsG0680030329.01.T01 AT2G44890 31.116 466 278 12 2 455 47 481 1.90e-69 229
MsG0680030329.01.T01 AT3G53130 25.000 440 295 14 39 463 120 539 3.04e-29 120
MsG0680030329.01.T01 AT1G31800 23.928 443 303 13 35 463 147 569 2.16e-28 118
MsG0680030329.01.T01 AT5G52400 31.222 221 141 5 221 440 286 496 3.76e-23 102
MsG0680030329.01.T01 AT2G26710 24.724 453 299 17 9 452 81 500 7.74e-23 101
MsG0680030329.01.T01 AT5G51900 39.098 133 72 2 178 301 1 133 3.25e-22 95.9
MsG0680030329.01.T01 AT3G61040 30.837 227 145 7 217 442 255 470 6.37e-21 95.9
MsG0680030329.01.T01 AT4G13290 25.055 451 285 19 4 432 35 454 6.48e-21 95.9
MsG0680030329.01.T01 AT4G15110 23.319 476 303 19 35 463 118 578 9.21e-21 95.5
MsG0680030329.01.T01 AT3G14680 23.778 450 287 21 10 441 79 490 3.33e-20 93.6
MsG0680030329.01.T01 AT3G14650 22.857 455 285 20 10 441 79 490 8.03e-20 92.4
MsG0680030329.01.T01 AT5G24900 27.559 254 167 8 213 460 165 407 9.48e-20 91.7
MsG0680030329.01.T01 AT5G24900 26.190 252 173 6 213 460 282 524 1.21e-19 92.0
MsG0680030329.01.T01 AT4G13310 24.330 448 300 18 4 432 34 461 1.81e-19 91.3
MsG0680030329.01.T01 AT4G37340 25.862 290 192 10 131 417 171 440 2.30e-19 90.9
MsG0680030329.01.T01 AT3G48270 23.721 430 271 18 3 411 38 431 2.94e-19 90.5
MsG0680030329.01.T01 AT3G48300 22.296 453 303 19 3 438 36 456 3.28e-19 90.5
MsG0680030329.01.T01 AT3G48300 22.296 453 303 19 3 438 38 458 3.31e-19 90.5
MsG0680030329.01.T01 AT3G14660 22.026 454 290 19 10 441 79 490 3.48e-19 90.5
MsG0680030329.01.T01 AT3G14640 24.348 460 274 24 10 441 101 514 5.54e-19 90.1
MsG0680030329.01.T01 AT3G14640 24.348 460 274 24 10 441 79 492 6.20e-19 89.7
MsG0680030329.01.T01 AT1G13080 23.140 363 246 10 86 439 16 354 1.42e-18 87.8
MsG0680030329.01.T01 AT1G66030 36.975 119 66 3 6 123 53 163 1.43e-18 83.2
MsG0680030329.01.T01 AT4G37370 25.836 329 202 10 108 424 148 446 1.45e-18 88.6
MsG0680030329.01.T01 AT5G57260 26.074 326 208 12 103 411 134 443 1.91e-18 88.2
MsG0680030329.01.T01 AT1G13080 23.256 387 254 11 72 439 110 472 6.27e-18 86.7
MsG0680030329.01.T01 AT5G07990 24.803 254 182 6 193 442 228 476 1.25e-17 85.9
MsG0680030329.01.T01 AT2G24180 27.542 236 159 5 197 429 238 464 1.90e-17 85.1
MsG0680030329.01.T01 AT2G27000 25.000 376 241 14 82 440 129 480 2.06e-17 85.1
MsG0680030329.01.T01 AT2G30770 24.249 466 311 17 4 448 35 479 2.14e-17 85.1
MsG0680030329.01.T01 AT1G64940 27.638 199 139 3 267 463 313 508 2.67e-17 84.7
MsG0680030329.01.T01 AT5G38450 30.144 209 130 6 255 460 316 511 3.94e-17 84.3
MsG0680030329.01.T01 AT3G20940 22.611 429 295 13 12 421 55 465 4.82e-17 84.0
MsG0680030329.01.T01 AT2G45580 20.244 410 283 17 50 442 100 482 5.79e-17 83.6
MsG0680030329.01.T01 AT5G24910 22.565 421 260 17 73 463 148 532 1.02e-16 83.2
MsG0680030329.01.T01 AT5G06905 29.719 249 142 10 197 424 231 467 1.38e-16 82.4
MsG0680030329.01.T01 AT3G03470 25.869 259 180 6 214 463 254 509 1.59e-16 82.4
MsG0680030329.01.T01 AT2G46660 25.177 282 187 9 193 463 260 528 1.86e-16 82.4
MsG0680030329.01.T01 AT3G14660 26.210 248 157 10 204 441 113 344 2.46e-16 80.9
MsG0680030329.01.T01 AT3G20950 23.626 364 250 12 78 431 132 477 3.15e-16 81.6
MsG0680030329.01.T01 AT4G13770 27.679 224 138 6 229 442 264 473 3.56e-16 81.3
MsG0680030329.01.T01 AT3G20140 24.425 348 245 9 85 429 135 467 4.17e-16 81.3
MsG0680030329.01.T01 AT2G45580 23.868 243 170 8 204 442 97 328 5.10e-16 79.7
MsG0680030329.01.T01 AT1G64950 26.131 199 142 3 267 463 312 507 7.52e-16 80.1
MsG0680030329.01.T01 AT2G23190 25.490 306 205 9 115 417 199 484 7.57e-16 80.5
MsG0680030329.01.T01 AT1G66540 27.397 219 143 6 199 417 66 268 9.84e-16 78.6
MsG0680030329.01.T01 AT4G15350 23.743 358 240 14 85 429 128 465 1.14e-15 79.7
MsG0680030329.01.T01 AT2G27010 25.862 232 159 7 202 429 225 447 1.18e-15 79.7
MsG0680030329.01.T01 AT1G66540 27.397 219 143 6 199 417 125 327 1.62e-15 78.6
MsG0680030329.01.T01 AT1G50520 23.442 337 223 14 105 428 157 471 1.64e-15 79.3
MsG0680030329.01.T01 AT3G14610 26.984 252 151 11 204 441 258 490 2.93e-15 78.6
MsG0680030329.01.T01 AT2G23220 27.434 226 147 5 199 424 254 462 3.93e-15 78.2
MsG0680030329.01.T01 AT4G37330 26.496 234 154 7 184 417 222 437 4.12e-15 77.8
MsG0680030329.01.T01 AT3G28740 27.586 232 148 7 199 430 247 458 4.84e-15 77.8
MsG0680030329.01.T01 AT5G24950 24.762 210 143 5 228 432 261 460 5.79e-15 77.4
MsG0680030329.01.T01 AT5G35715 23.913 368 253 13 73 429 46 397 6.93e-15 77.0
MsG0680030329.01.T01 AT4G27710 21.111 450 315 14 10 443 74 499 7.19e-15 77.4
MsG0680030329.01.T01 AT3G26830 24.786 234 168 6 197 429 232 458 1.11e-14 76.6
MsG0680030329.01.T01 AT2G26170 25.751 233 165 7 235 463 210 438 1.16e-14 76.3
MsG0680030329.01.T01 AT3G48280 24.845 322 201 15 108 411 133 431 1.27e-14 76.3
MsG0680030329.01.T01 AT2G26170 26.210 248 173 8 222 463 278 521 1.38e-14 76.3
MsG0680030329.01.T01 AT1G11610 22.727 462 302 15 4 439 35 467 1.49e-14 76.3
MsG0680030329.01.T01 AT3G26270 25.316 237 164 5 197 429 236 463 1.61e-14 76.3
MsG0680030329.01.T01 AT4G37400 22.414 348 251 7 108 453 147 477 1.62e-14 76.3
MsG0680030329.01.T01 AT3G48310 20.444 450 303 17 3 432 39 453 1.97e-14 75.9
MsG0680030329.01.T01 AT1G11610 23.179 453 311 16 4 439 35 467 2.08e-14 75.9
MsG0680030329.01.T01 AT4G31950 23.904 251 181 6 193 437 231 477 2.64e-14 75.5
MsG0680030329.01.T01 AT3G48290 21.759 432 277 18 3 411 40 433 2.84e-14 75.5
MsG0680030329.01.T01 AT1G01190 26.126 222 149 6 234 450 305 516 4.10e-14 75.1
MsG0680030329.01.T01 AT1G01190 26.126 222 149 6 234 450 310 521 4.18e-14 75.1
MsG0680030329.01.T01 AT2G25160 26.457 223 143 7 199 411 247 458 4.45e-14 74.7
MsG0680030329.01.T01 AT4G15360 23.848 369 247 15 74 429 121 468 6.63e-14 74.3
MsG0680030329.01.T01 AT4G12310 24.906 265 189 5 197 456 246 505 7.21e-14 74.3
MsG0680030329.01.T01 AT2G12190 24.696 247 175 6 216 458 265 504 1.07e-13 73.6
MsG0680030329.01.T01 AT4G31940 23.171 246 180 5 197 437 248 489 1.70e-13 73.2
MsG0680030329.01.T01 AT4G39950 24.686 239 170 6 197 432 307 538 2.11e-13 72.8
MsG0680030329.01.T01 AT4G12300 23.043 230 171 3 226 453 271 496 2.22e-13 72.8
MsG0680030329.01.T01 AT4G39950 24.686 239 170 6 197 432 267 498 2.33e-13 72.8
MsG0680030329.01.T01 AT3G61880 23.695 249 168 8 193 432 260 495 3.37e-13 72.0
MsG0680030329.01.T01 AT4G37410 23.304 339 222 10 100 430 143 451 3.83e-13 71.6
MsG0680030329.01.T01 AT5G04330 21.739 253 186 6 197 442 231 478 4.06e-13 71.6
MsG0680030329.01.T01 AT5G57220 22.156 334 238 7 128 459 164 477 4.24e-13 71.6
MsG0680030329.01.T01 AT1G64930 25.123 203 145 4 265 463 309 508 4.24e-13 71.6
MsG0680030329.01.T01 AT4G12320 24.528 265 190 5 197 456 244 503 4.57e-13 71.6
MsG0680030329.01.T01 AT5G06900 21.654 254 189 5 183 436 222 465 5.29e-13 71.2
MsG0680030329.01.T01 AT3G61880 23.695 249 168 8 193 432 260 495 5.89e-13 71.2
MsG0680030329.01.T01 AT4G31500 21.862 247 187 3 197 442 231 472 6.49e-13 71.2
MsG0680030329.01.T01 AT4G20240 24.716 352 234 14 42 385 85 413 1.10e-12 70.1
MsG0680030329.01.T01 AT1G13090 21.096 365 266 13 73 429 108 458 1.25e-12 70.1
MsG0680030329.01.T01 AT2G46960 21.749 423 271 17 34 432 99 485 2.35e-12 69.3
MsG0680030329.01.T01 AT4G31970 23.171 246 180 5 197 437 247 488 2.76e-12 69.3
MsG0680030329.01.T01 AT1G67110 26.020 196 135 4 255 448 310 497 3.78e-12 68.6
MsG0680030329.01.T01 AT2G46960 26.829 205 132 8 235 432 176 369 4.10e-12 68.2
MsG0680030329.01.T01 AT5G04630 22.022 277 197 6 198 463 240 508 4.40e-12 68.6
MsG0680030329.01.T01 AT3G20110 22.543 346 236 11 85 421 132 454 4.57e-12 68.6
MsG0680030329.01.T01 AT3G26180 23.636 220 154 6 225 439 128 338 5.17e-12 67.8
MsG0680030329.01.T01 AT5G42590 23.045 243 180 4 197 439 232 467 6.17e-12 68.2
MsG0680030329.01.T01 AT2G46950 22.654 437 293 16 9 432 135 539 6.19e-12 68.2
MsG0680030329.01.T01 AT2G30750 25.571 219 150 5 218 432 251 460 6.23e-12 68.2
MsG0680030329.01.T01 AT3G26180 23.636 220 154 6 225 439 262 472 7.98e-12 67.8
MsG0680030329.01.T01 AT3G26150 21.212 231 170 4 213 439 250 472 1.22e-11 67.0
MsG0680030329.01.T01 AT3G20080 24.779 226 155 6 200 419 247 463 1.61e-11 66.6
MsG0680030329.01.T01 AT3G20080 24.779 226 155 6 200 419 247 463 1.61e-11 66.6
MsG0680030329.01.T01 AT3G20080 24.779 226 155 6 200 419 110 326 1.67e-11 66.2
MsG0680030329.01.T01 AT3G20080 24.779 226 155 6 200 419 110 326 1.67e-11 66.2
MsG0680030329.01.T01 AT3G20080 24.779 226 155 6 200 419 110 326 1.67e-11 66.2
MsG0680030329.01.T01 AT3G20080 24.779 226 155 6 200 419 110 326 1.67e-11 66.2
MsG0680030329.01.T01 AT3G20090 24.561 228 152 7 200 419 110 325 1.83e-11 66.2
MsG0680030329.01.T01 AT3G44250 22.703 370 254 11 73 429 108 458 1.95e-11 66.6
MsG0680030329.01.T01 AT4G37360 24.127 315 216 10 106 417 146 440 2.29e-11 66.2
MsG0680030329.01.T01 AT3G20090 25.000 228 151 7 200 419 248 463 2.91e-11 65.9
MsG0680030329.01.T01 AT5G09970 23.445 209 150 6 226 432 302 502 3.04e-11 65.9
MsG0680030329.01.T01 AT3G26200 23.032 343 236 12 105 439 147 469 3.24e-11 65.9
MsG0680030329.01.T01 AT5G36220 24.658 219 148 5 199 417 99 300 4.86e-11 64.7
MsG0680030329.01.T01 AT3G26310 26.667 195 122 6 225 411 258 439 5.26e-11 65.1
MsG0680030329.01.T01 AT1G13100 19.747 395 299 11 73 462 105 486 5.49e-11 65.1
MsG0680030329.01.T01 AT3G26170 22.273 220 157 6 225 439 262 472 5.66e-11 65.1
MsG0680030329.01.T01 AT2G02580 24.556 338 225 12 115 441 152 470 5.90e-11 65.1
MsG0680030329.01.T01 AT5G36220 24.658 219 148 5 199 417 245 446 5.92e-11 65.1
MsG0680030329.01.T01 AT3G61040 35.537 121 69 4 217 337 255 366 8.37e-11 63.9
MsG0680030329.01.T01 AT1G28430 27.149 221 143 8 216 429 260 469 9.33e-11 64.3

Find 86 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGAGATTAAAGAAAATTT+TGG 0.148197 6:-649692 MsG0680030329.01.T01:CDS
GAGAGAAAGCAAGCAATTAA+AGG 0.248200 6:-649563 MsG0680030329.01.T01:CDS
ATTAATATTGAAAAGAAGTT+AGG 0.249511 6:-649665 MsG0680030329.01.T01:CDS
ATAAAGTGCCTAAAAGTATT+TGG 0.249799 6:-650033 MsG0680030329.01.T01:CDS
GTTTACCAGCATGAACTATT+TGG 0.255278 6:-650473 MsG0680030329.01.T01:CDS
TTGTATTAGGATTAACAATA+TGG 0.260430 6:+649522 None:intergenic
TGCTGGACCTAGAACTTGTT+TGG 0.303612 6:-649360 MsG0680030329.01.T01:CDS
TGGGGAGATTTGAAGAGATA+TGG 0.308634 6:-649475 MsG0680030329.01.T01:CDS
CATGAGATATTTGAAGCCTT+TGG 0.310048 6:-650376 MsG0680030329.01.T01:CDS
TGCTTTCTCTCAAAGGGTAT+TGG 0.318382 6:+649575 None:intergenic
AGAATATGCCTTCTTCGATT+TGG 0.319635 6:+650062 None:intergenic
TCCTTTCCCAAACAAGTTCT+AGG 0.335209 6:+649353 None:intergenic
AAATCAATGGAAAGACAATT+AGG 0.345217 6:+650115 None:intergenic
TATTGCTACACACCCTTTAG+TGG 0.359348 6:-649729 MsG0680030329.01.T01:CDS
GAGAAGTTTGATTCCTTTGT+TGG 0.359539 6:-650233 MsG0680030329.01.T01:CDS
TGAAGAATGGTTTGAAGGTT+AGG 0.363580 6:-649220 MsG0680030329.01.T01:CDS
GGGCTATATGTGAAGCTCTA+AGG 0.366133 6:-649607 MsG0680030329.01.T01:CDS
GATATGGGGAAAAGATTGTT+TGG 0.376603 6:-649459 MsG0680030329.01.T01:CDS
CGAGGCAAGTTCCACAATAA+TGG 0.379155 6:+650565 None:intergenic
GCTGGACCTAGAACTTGTTT+GGG 0.381694 6:-649359 MsG0680030329.01.T01:CDS
TGCATATACAAATTGATCAT+AGG 0.384677 6:+649952 None:intergenic
GGGGAGATTTGAAGAGATAT+GGG 0.397435 6:-649474 MsG0680030329.01.T01:CDS
AAAAGCTAGTTTATCTTCAT+GGG 0.415064 6:-649628 MsG0680030329.01.T01:CDS
TAGGAACACATGTGAGTTCA+TGG 0.415085 6:-650503 MsG0680030329.01.T01:CDS
ACAATCGAATGGCTTAATAT+AGG 0.424668 6:+649251 None:intergenic
CAGAGACATGGAAATACAAT+AGG 0.424848 6:-650330 MsG0680030329.01.T01:CDS
ATTGTTCTTCTCATGAAGAA+TGG 0.427552 6:-649233 MsG0680030329.01.T01:CDS
GAATCTTAGCTTCCACTAAA+GGG 0.434801 6:+649717 None:intergenic
GCATTCAATCTCTTTGTAGC+GGG 0.437335 6:-649794 MsG0680030329.01.T01:CDS
GCCTTCTCACATGCGACATC+AGG 0.439836 6:+650091 None:intergenic
AGAATCTTAGCTTCCACTAA+AGG 0.439883 6:+649716 None:intergenic
TTAATATTGAAAAGAAGTTA+GGG 0.441140 6:-649664 MsG0680030329.01.T01:CDS
GTATTTCCATGTCTCTGAAT+CGG 0.444231 6:+650336 None:intergenic
AATATTTGTTCCGTAGTCCT+TGG 0.452032 6:-650145 MsG0680030329.01.T01:CDS
TCTCATGAAGAATGGTTTGA+AGG 0.452138 6:-649225 MsG0680030329.01.T01:CDS
CTATAACTTCAGCGCTTACA+TGG 0.457857 6:-649763 MsG0680030329.01.T01:CDS
GAACATGGCCATCCACTACT+TGG 0.460084 6:+649273 None:intergenic
CTTTCAGATATCCATCTCTC+TGG 0.463966 6:+649428 None:intergenic
TTTCTCTCAAAGGGTATTGG+AGG 0.464054 6:+649578 None:intergenic
ATTGCTTGCTTTCTCTCAAA+GGG 0.475212 6:+649569 None:intergenic
ATATTTGAAGCCTTTGGAGA+TGG 0.486237 6:-650370 MsG0680030329.01.T01:CDS
AATTGCTTGCTTTCTCTCAA+AGG 0.492373 6:+649568 None:intergenic
AAGTTCATTAGTTATAATGC+TGG 0.493549 6:-649377 MsG0680030329.01.T01:CDS
GCATGATAATACCATTATTG+TGG 0.500820 6:-650576 MsG0680030329.01.T01:CDS
GAAAATCATTCAAAACAAGT+TGG 0.505159 6:-650257 MsG0680030329.01.T01:CDS
CAACCACTGACCCTTGTTGT+CGG 0.506613 6:+650203 None:intergenic
CATGTGAGTTCATGGGACCT+TGG 0.507567 6:-650495 MsG0680030329.01.T01:CDS
TGCGACATCAGGAAAATCAA+TGG 0.516368 6:+650102 None:intergenic
TAACATGTGATGCAAGTTGA+TGG 0.518161 6:+650438 None:intergenic
TCCTGATGTCGCATGTGAGA+AGG 0.528443 6:-650092 MsG0680030329.01.T01:CDS
TGCAAATATTAAGTCAAAGA+GGG 0.529509 6:-649933 MsG0680030329.01.T01:CDS
AGTGGAAGCTAAGATTCTTG+AGG 0.538509 6:-649711 MsG0680030329.01.T01:CDS
TTGGATCATGTCCGACAACA+AGG 0.540828 6:-650214 MsG0680030329.01.T01:CDS
AACTTTGATGAAAGAAGAGA+AGG 0.544814 6:-649861 MsG0680030329.01.T01:CDS
TAACTAATGAACTTGTAAGA+TGG 0.546221 6:+649386 None:intergenic
ACCTAGAACTTGTTTGGGAA+AGG 0.559793 6:-649354 MsG0680030329.01.T01:CDS
ATGCAAATATTAAGTCAAAG+AGG 0.567712 6:-649934 MsG0680030329.01.T01:CDS
AACATGTGATGCAAGTTGAT+GGG 0.575489 6:+650439 None:intergenic
GTTGAATATTCCATCTCCAA+AGG 0.578090 6:+650360 None:intergenic
TGGAGTTCAAGCCAGAGAGA+TGG 0.583586 6:-649439 MsG0680030329.01.T01:CDS
TGCATTCAATCTCTTTGTAG+CGG 0.586147 6:-649795 MsG0680030329.01.T01:CDS
GACAATTAGGATCACATCCA+AGG 0.586200 6:+650128 None:intergenic
AGTTATTGAAACAACAACAT+AGG 0.587268 6:-650522 MsG0680030329.01.T01:CDS
CAAATATTGTGTCCAAGTAG+TGG 0.596917 6:-649285 MsG0680030329.01.T01:CDS
AGGATCACATCCAAGGACTA+CGG 0.600087 6:+650135 None:intergenic
GAGAGATGGATATCTGAAAG+AGG 0.600909 6:-649425 MsG0680030329.01.T01:CDS
TCATGAGAAGAACAATCGAA+TGG 0.603388 6:+649240 None:intergenic
GGATTAACAATATGGCCACT+AGG 0.608204 6:+649530 None:intergenic
ACTTTGATGAAAGAAGAGAA+GGG 0.611137 6:-649860 MsG0680030329.01.T01:CDS
AGTGACCAAATAGTTCATGC+TGG 0.619583 6:+650468 None:intergenic
TATTGTGTCCAAGTAGTGGA+TGG 0.620747 6:-649281 MsG0680030329.01.T01:CDS
AAAGCTAGTTTATCTTCATG+GGG 0.622847 6:-649627 MsG0680030329.01.T01:CDS
AGGAACACATGTGAGTTCAT+GGG 0.625807 6:-650502 MsG0680030329.01.T01:CDS
CATTCAATCTCTTTGTAGCG+GGG 0.631176 6:-649793 MsG0680030329.01.T01:CDS
TGTCCGACAACAAGGGTCAG+TGG 0.632974 6:-650206 MsG0680030329.01.T01:CDS
AGATGGATATCTGAAAGAGG+AGG 0.633030 6:-649422 MsG0680030329.01.T01:CDS
CTTTGATGAAAGAAGAGAAG+GGG 0.635301 6:-649859 MsG0680030329.01.T01:CDS
TCAACACCGATTCAGAGACA+TGG 0.653719 6:-650342 MsG0680030329.01.T01:CDS
GTTATGAAATCATGAACTCG+AGG 0.654252 6:+650547 None:intergenic
GGGAGATTTGAAGAGATATG+GGG 0.657198 6:-649473 MsG0680030329.01.T01:CDS
ACATGTGATGCAAGTTGATG+GGG 0.662103 6:+650440 None:intergenic
TAGTTCATGCTGGTAAACCA+AGG 0.676905 6:+650478 None:intergenic
TGGATCATGTCCGACAACAA+GGG 0.683502 6:-650213 MsG0680030329.01.T01:CDS
AATGGCTTAATATAGGAACA+TGG 0.698384 6:+649258 None:intergenic
AAAGGTGATATACTTCCTAG+TGG 0.702478 6:-649545 MsG0680030329.01.T01:CDS
TGTCGGACATGATCCAACAA+AGG 0.703258 6:+650220 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAGTATTATTGTATT+AGG + Chr6:650267-650286 None:intergenic 10.0%
!! ATGTAGAAAAAATAATGAAA+TGG - Chr6:649876-649895 MsG0680030329.01.T01:CDS 15.0%
!! ATTAATATTGAAAAGAAGTT+AGG - Chr6:650108-650127 MsG0680030329.01.T01:CDS 15.0%
!! TTAATATTGAAAAGAAGTTA+GGG - Chr6:650109-650128 MsG0680030329.01.T01:CDS 15.0%
!!! TAACTTCTTTTCAATATTAA+TGG + Chr6:650109-650128 None:intergenic 15.0%
!! TTGTATTAGGATTAACAATA+TGG + Chr6:650254-650273 None:intergenic 20.0%
!!! ACTATTTTTCTTGTATTCAA+TGG - Chr6:650278-650297 MsG0680030329.01.T01:CDS 20.0%
!!! AGGAGATTAAAGAAAATTTT+GGG - Chr6:650082-650101 MsG0680030329.01.T01:CDS 20.0%
!!! CTATTTTTCTTGTATTCAAT+GGG - Chr6:650279-650298 MsG0680030329.01.T01:CDS 20.0%
!!! TATTTTTCTTGTATTCAATG+GGG - Chr6:650280-650299 MsG0680030329.01.T01:CDS 20.0%
!!! TGTTTTGACAATTATGTTAA+GGG - Chr6:649364-649383 MsG0680030329.01.T01:CDS 20.0%
! AAATCAATGGAAAGACAATT+AGG + Chr6:649661-649680 None:intergenic 25.0%
! AAGTTCATTAGTTATAATGC+TGG - Chr6:650396-650415 MsG0680030329.01.T01:CDS 25.0%
! AGTTATTGAAACAACAACAT+AGG - Chr6:649251-649270 MsG0680030329.01.T01:CDS 25.0%
! ATGCAAATATTAAGTCAAAG+AGG - Chr6:649839-649858 MsG0680030329.01.T01:CDS 25.0%
! GAAAATCATTCAAAACAAGT+TGG - Chr6:649516-649535 MsG0680030329.01.T01:CDS 25.0%
! TAACTAATGAACTTGTAAGA+TGG + Chr6:650390-650409 None:intergenic 25.0%
! TGCAAATATTAAGTCAAAGA+GGG - Chr6:649840-649859 MsG0680030329.01.T01:CDS 25.0%
! TGCATATACAAATTGATCAT+AGG + Chr6:649824-649843 None:intergenic 25.0%
!! AAAAAGCTAGTTTATCTTCA+TGG - Chr6:650144-650163 MsG0680030329.01.T01:CDS 25.0%
!! AAAAGCTAGTTTATCTTCAT+GGG - Chr6:650145-650164 MsG0680030329.01.T01:CDS 25.0%
!! GAGGAGATTAAAGAAAATTT+TGG - Chr6:650081-650100 MsG0680030329.01.T01:CDS 25.0%
!!! ATAAAGTGCCTAAAAGTATT+TGG - Chr6:649740-649759 MsG0680030329.01.T01:CDS 25.0%
!!! GTGTTTTGACAATTATGTTA+AGG - Chr6:649363-649382 MsG0680030329.01.T01:CDS 25.0%
AACTTTGATGAAAGAAGAGA+AGG - Chr6:649912-649931 MsG0680030329.01.T01:CDS 30.0%
AATGGCTTAATATAGGAACA+TGG + Chr6:650518-650537 None:intergenic 30.0%
ACAATCGAATGGCTTAATAT+AGG + Chr6:650525-650544 None:intergenic 30.0%
ACTTTGATGAAAGAAGAGAA+GGG - Chr6:649913-649932 MsG0680030329.01.T01:CDS 30.0%
ATTGTTCTTCTCATGAAGAA+TGG - Chr6:650540-650559 MsG0680030329.01.T01:CDS 30.0%
GTATTTGGAAGTTGCAAAAA+TGG - Chr6:649755-649774 MsG0680030329.01.T01:CDS 30.0%
TGAAGAGAAAAATATGACCA+AGG - Chr6:649789-649808 MsG0680030329.01.T01:CDS 30.0%
TTGCAAAAATGGCTTCAAAT+TGG - Chr6:649766-649785 MsG0680030329.01.T01:CDS 30.0%
! AAAGCTAGTTTATCTTCATG+GGG - Chr6:650146-650165 MsG0680030329.01.T01:CDS 30.0%
! GCATGATGATAAGTTTTTGA+GGG - Chr6:649951-649970 MsG0680030329.01.T01:CDS 30.0%
! TGCAACTTCCAAATACTTTT+AGG + Chr6:649751-649770 None:intergenic 30.0%
! TGCATGATGATAAGTTTTTG+AGG - Chr6:649950-649969 MsG0680030329.01.T01:CDS 30.0%
AAAGGTGATATACTTCCTAG+TGG - Chr6:650228-650247 MsG0680030329.01.T01:CDS 35.0%
AATATTTGTTCCGTAGTCCT+TGG - Chr6:649628-649647 MsG0680030329.01.T01:CDS 35.0%
AATTGCTTGCTTTCTCTCAA+AGG + Chr6:650208-650227 None:intergenic 35.0%
AGAATATGCCTTCTTCGATT+TGG + Chr6:649714-649733 None:intergenic 35.0%
AGAATCTTAGCTTCCACTAA+AGG + Chr6:650060-650079 None:intergenic 35.0%
ATTGCTTGCTTTCTCTCAAA+GGG + Chr6:650207-650226 None:intergenic 35.0%
CAAATATTGTGTCCAAGTAG+TGG - Chr6:650488-650507 MsG0680030329.01.T01:CDS 35.0%
CAGAGACATGGAAATACAAT+AGG - Chr6:649443-649462 MsG0680030329.01.T01:CDS 35.0%
CTTTGATGAAAGAAGAGAAG+GGG - Chr6:649914-649933 MsG0680030329.01.T01:CDS 35.0%
GAATCTTAGCTTCCACTAAA+GGG + Chr6:650059-650078 None:intergenic 35.0%
GAGAAGTTTGATTCCTTTGT+TGG - Chr6:649540-649559 MsG0680030329.01.T01:CDS 35.0%
GAGAGAAAGCAAGCAATTAA+AGG - Chr6:650210-650229 MsG0680030329.01.T01:CDS 35.0%
GATATGGGGAAAAGATTGTT+TGG - Chr6:650314-650333 MsG0680030329.01.T01:CDS 35.0%
GTATTTCCATGTCTCTGAAT+CGG + Chr6:649440-649459 None:intergenic 35.0%
GTTATGAAATCATGAACTCG+AGG + Chr6:649229-649248 None:intergenic 35.0%
GTTGAATATTCCATCTCCAA+AGG + Chr6:649416-649435 None:intergenic 35.0%
GTTTACCAGCATGAACTATT+TGG - Chr6:649300-649319 MsG0680030329.01.T01:CDS 35.0%
TCATGAGAAGAACAATCGAA+TGG + Chr6:650536-650555 None:intergenic 35.0%
TCTCATGAAGAATGGTTTGA+AGG - Chr6:650548-650567 MsG0680030329.01.T01:CDS 35.0%
TGAAGAATGGTTTGAAGGTT+AGG - Chr6:650553-650572 MsG0680030329.01.T01:CDS 35.0%
TGCATTCAATCTCTTTGTAG+CGG - Chr6:649978-649997 MsG0680030329.01.T01:CDS 35.0%
! ATATTTGAAGCCTTTGGAGA+TGG - Chr6:649403-649422 MsG0680030329.01.T01:CDS 35.0%
! CATGAGATATTTGAAGCCTT+TGG - Chr6:649397-649416 MsG0680030329.01.T01:CDS 35.0%
! GCTTTTAACCAAATCGAAGA+AGG - Chr6:649703-649722 MsG0680030329.01.T01:CDS 35.0%
! TAACATGTGATGCAAGTTGA+TGG + Chr6:649338-649357 None:intergenic 35.0%
!! AACATGTGATGCAAGTTGAT+GGG + Chr6:649337-649356 None:intergenic 35.0%
AGATGGATATCTGAAAGAGG+AGG - Chr6:650351-650370 MsG0680030329.01.T01:CDS 40.0%
AGGAACACATGTGAGTTCAT+GGG - Chr6:649271-649290 MsG0680030329.01.T01:CDS 40.0%
AGTGACCAAATAGTTCATGC+TGG + Chr6:649308-649327 None:intergenic 40.0%
AGTGGAAGCTAAGATTCTTG+AGG - Chr6:650062-650081 MsG0680030329.01.T01:CDS 40.0%
CATTCAATCTCTTTGTAGCG+GGG - Chr6:649980-649999 MsG0680030329.01.T01:CDS 40.0%
CTATAACTTCAGCGCTTACA+TGG - Chr6:650010-650029 MsG0680030329.01.T01:CDS 40.0%
CTTTCAGATATCCATCTCTC+TGG + Chr6:650348-650367 None:intergenic 40.0%
GACAATTAGGATCACATCCA+AGG + Chr6:649648-649667 None:intergenic 40.0%
GAGAGATGGATATCTGAAAG+AGG - Chr6:650348-650367 MsG0680030329.01.T01:CDS 40.0%
GCATTCAATCTCTTTGTAGC+GGG - Chr6:649979-649998 MsG0680030329.01.T01:CDS 40.0%
GGATTAACAATATGGCCACT+AGG + Chr6:650246-650265 None:intergenic 40.0%
GGGAGATTTGAAGAGATATG+GGG - Chr6:650300-650319 MsG0680030329.01.T01:CDS 40.0%
GGGGAGATTTGAAGAGATAT+GGG - Chr6:650299-650318 MsG0680030329.01.T01:CDS 40.0%
TAGGAACACATGTGAGTTCA+TGG - Chr6:649270-649289 MsG0680030329.01.T01:CDS 40.0%
TAGTTCATGCTGGTAAACCA+AGG + Chr6:649298-649317 None:intergenic 40.0%
TATTGCTACACACCCTTTAG+TGG - Chr6:650044-650063 MsG0680030329.01.T01:CDS 40.0%
TCCTTTCCCAAACAAGTTCT+AGG + Chr6:650423-650442 None:intergenic 40.0%
TGCGACATCAGGAAAATCAA+TGG + Chr6:649674-649693 None:intergenic 40.0%
TGGGGAGATTTGAAGAGATA+TGG - Chr6:650298-650317 MsG0680030329.01.T01:CDS 40.0%
! ACCTAGAACTTGTTTGGGAA+AGG - Chr6:650419-650438 MsG0680030329.01.T01:CDS 40.0%
! ATCATAGGTTTTGCATGCCT+TGG + Chr6:649809-649828 None:intergenic 40.0%
! TATTGTGTCCAAGTAGTGGA+TGG - Chr6:650492-650511 MsG0680030329.01.T01:CDS 40.0%
! TGCTTTCTCTCAAAGGGTAT+TGG + Chr6:650201-650220 None:intergenic 40.0%
!! ACATGTGATGCAAGTTGATG+GGG + Chr6:649336-649355 None:intergenic 40.0%
!! TTTCTCTCAAAGGGTATTGG+AGG + Chr6:650198-650217 None:intergenic 40.0%
AGGATCACATCCAAGGACTA+CGG + Chr6:649641-649660 None:intergenic 45.0%
CGAGGCAAGTTCCACAATAA+TGG + Chr6:649211-649230 None:intergenic 45.0%
GGGCTATATGTGAAGCTCTA+AGG - Chr6:650166-650185 MsG0680030329.01.T01:CDS 45.0%
TGGATCATGTCCGACAACAA+GGG - Chr6:649560-649579 MsG0680030329.01.T01:CDS 45.0%
TGTCGGACATGATCCAACAA+AGG + Chr6:649556-649575 None:intergenic 45.0%
TTGGATCATGTCCGACAACA+AGG - Chr6:649559-649578 MsG0680030329.01.T01:CDS 45.0%
! GCTGGACCTAGAACTTGTTT+GGG - Chr6:650414-650433 MsG0680030329.01.T01:CDS 45.0%
! TGCTGGACCTAGAACTTGTT+TGG - Chr6:650413-650432 MsG0680030329.01.T01:CDS 45.0%
!! TCAACACCGATTCAGAGACA+TGG - Chr6:649431-649450 MsG0680030329.01.T01:CDS 45.0%
CATGTGAGTTCATGGGACCT+TGG - Chr6:649278-649297 MsG0680030329.01.T01:CDS 50.0%
GAACATGGCCATCCACTACT+TGG + Chr6:650503-650522 None:intergenic 50.0%
TCCTGATGTCGCATGTGAGA+AGG - Chr6:649681-649700 MsG0680030329.01.T01:CDS 50.0%
TGGAGTTCAAGCCAGAGAGA+TGG - Chr6:650334-650353 MsG0680030329.01.T01:CDS 50.0%
! CAACCACTGACCCTTGTTGT+CGG + Chr6:649573-649592 None:intergenic 50.0%
GCCTTCTCACATGCGACATC+AGG + Chr6:649685-649704 None:intergenic 55.0%
TGTCCGACAACAAGGGTCAG+TGG - Chr6:649567-649586 MsG0680030329.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr6 gene 649199 650596 649199 ID=MsG0680030329.01;Name=MsG0680030329.01
Chr6 mRNA 649199 650596 649199 ID=MsG0680030329.01.T01;Parent=MsG0680030329.01;Name=MsG0680030329.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|465
Chr6 exon 649199 650596 649199 ID=MsG0680030329.01.T01:exon:2222;Parent=MsG0680030329.01.T01
Chr6 CDS 649199 650596 649199 ID=MsG0680030329.01.T01:cds;Parent=MsG0680030329.01.T01
Gene Sequence

>MsG0680030329.01.T01

ATGATAATACCATTATTGTGGAACTTGCCTCGAGTTCATGATTTCATAACTCAGTTATTGAAACAACAACATAGGAACACATGTGAGTTCATGGGACCTTGGTTTACCAGCATGAACTATTTGGTCACTAGTGACCCCATCAACTTGCATCACATGTTAAGCAAGTGTTTTGACAATTATGTTAAGGGTCATGAATATCATGAGATATTTGAAGCCTTTGGAGATGGAATATTCAACACCGATTCAGAGACATGGAAATACAATAGGTCTCTTTTTCACTCTATTCTCAAACAAAGAGATTTTGAATTCTTTCAAAAGAAAATCATTCAAAACAAGTTGGAGAGAAGTTTGATTCCTTTGTTGGATCATGTCCGACAACAAGGGTCAGTGGTTGATTTACAAGATGTCTTCAATCGTTTCACATTCGACAATATTTGTTCCGTAGTCCTTGGATGTGATCCTAATTGTCTTTCCATTGATTTTCCTGATGTCGCATGTGAGAAGGCTTTTAACCAAATCGAAGAAGGCATATTCTATAGACATAAAGTGCCTAAAAGTATTTGGAAGTTGCAAAAATGGCTTCAAATTGGTGAAGAGAAAAATATGACCAAGGCATGCAAAACCTATGATCAATTTGTATATGCAAATATTAAGTCAAAGAGGGAAGAGCTAAGCAAATGTAGAAAAAATAATGAAATGGTTGATTTGCTAACAACTTTGATGAAAGAAGAGAAGGGGTCACAAGTAGTAATGCATGATGATAAGTTTTTGAGGGATGTTGCATTCAATCTCTTTGTAGCGGGGAGAGATACTATAACTTCAGCGCTTACATGGCTCTTCTATCTTATTGCTACACACCCTTTAGTGGAAGCTAAGATTCTTGAGGAGATTAAAGAAAATTTTGGGACCATTAATATTGAAAAGAAGTTAGGGATTGATGAGTTGAAAAAGCTAGTTTATCTTCATGGGGCTATATGTGAAGCTCTAAGGCTTTTTCCTCCAATACCCTTTGAGAGAAAGCAAGCAATTAAAGGTGATATACTTCCTAGTGGCCATATTGTTAATCCTAATACAATAATACTATTTTTCTTGTATTCAATGGGGAGATTTGAAGAGATATGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAGAGATGGATATCTGAAAGAGGAGGCATTGTTCATATACCATCTTACAAGTTCATTAGTTATAATGCTGGACCTAGAACTTGTTTGGGAAAGGACTTGTCGTTCATTCAAATTAAGATGACAACAATTGCTATTTTGAGCAAATATTGTGTCCAAGTAGTGGATGGCCATGTTCCTATATTAAGCCATTCGATTGTTCTTCTCATGAAGAATGGTTTGAAGGTTAGGATAACAAAAAGAGAAATTTGA

Protein sequence

>MsG0680030329.01.T01

MIIPLLWNLPRVHDFITQLLKQQHRNTCEFMGPWFTSMNYLVTSDPINLHHMLSKCFDNYVKGHEYHEIFEAFGDGIFNTDSETWKYNRSLFHSILKQRDFEFFQKKIIQNKLERSLIPLLDHVRQQGSVVDLQDVFNRFTFDNICSVVLGCDPNCLSIDFPDVACEKAFNQIEEGIFYRHKVPKSIWKLQKWLQIGEEKNMTKACKTYDQFVYANIKSKREELSKCRKNNEMVDLLTTLMKEEKGSQVVMHDDKFLRDVAFNLFVAGRDTITSALTWLFYLIATHPLVEAKILEEIKENFGTINIEKKLGIDELKKLVYLHGAICEALRLFPPIPFERKQAIKGDILPSGHIVNPNTIILFFLYSMGRFEEIWGKDCLEFKPERWISERGGIVHIPSYKFISYNAGPRTCLGKDLSFIQIKMTTIAILSKYCVQVVDGHVPILSHSIVLLMKNGLKVRITKREI*