Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043201.01.T01 | AFK44508.1 | 97.131 | 244 | 7 | 0 | 1 | 244 | 1 | 244 | 1.37E-174 | 490 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043201.01.T01 | Q8LPS6 | 50.211 | 237 | 111 | 2 | 5 | 241 | 292 | 521 | 1.02E-78 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043201.01.T01 | I3SW66 | 97.131 | 244 | 7 | 0 | 1 | 244 | 1 | 244 | 6.56e-175 | 490 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000624.01 | MsG0880043201.01 | 0.805157 | 1.528947e-49 | 8.030735e-47 |
| MsG0180000782.01 | MsG0880043201.01 | 0.808600 | 2.860085e-50 | 1.642219e-47 |
| MsG0180003353.01 | MsG0880043201.01 | 0.803497 | 3.389159e-49 | 1.705761e-46 |
| MsG0180004493.01 | MsG0880043201.01 | 0.805691 | 1.181251e-49 | 6.290591e-47 |
| MsG0180005169.01 | MsG0880043201.01 | 0.805394 | 1.363326e-49 | 7.204511e-47 |
| MsG0780040430.01 | MsG0880043201.01 | 0.803131 | 4.034803e-49 | 2.011601e-46 |
| MsG0880043201.01 | MsG0880044704.01 | 0.811868 | 5.645660e-51 | 3.534591e-48 |
| MsG0880043201.01 | MsG0880047754.01 | 0.804450 | 2.148099e-49 | 1.107883e-46 |
| MsG0480018584.01 | MsG0880043201.01 | 0.814683 | 1.360099e-51 | 9.186596e-49 |
| MsG0480019007.01 | MsG0880043201.01 | 0.806486 | 8.035417e-50 | 4.366766e-47 |
| MsG0480022586.01 | MsG0880043201.01 | 0.811549 | 6.623013e-51 | 4.111724e-48 |
| MsG0480018218.01 | MsG0880043201.01 | 0.800479 | 1.413553e-48 | 6.588602e-46 |
| MsG0280010366.01 | MsG0880043201.01 | 0.801811 | 7.551315e-49 | 3.640417e-46 |
| MsG0780036659.01 | MsG0880043201.01 | 0.802672 | 5.020771e-49 | 2.474064e-46 |
| MsG0780036979.01 | MsG0880043201.01 | 0.812449 | 4.215710e-51 | 2.681388e-48 |
| MsG0780037341.01 | MsG0880043201.01 | 0.803256 | 3.801843e-49 | 1.901587e-46 |
| MsG0780037395.01 | MsG0880043201.01 | 0.802289 | 6.020408e-49 | 2.938031e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043201.01.T01 | MTR_8g007375 | 95.492 | 244 | 11 | 0 | 1 | 244 | 164 | 407 | 6.44e-175 | 487 |
| MsG0880043201.01.T01 | MTR_8g031510 | 97.126 | 174 | 5 | 0 | 71 | 244 | 1 | 174 | 8.86e-123 | 346 |
| MsG0880043201.01.T01 | MTR_2g025330 | 55.367 | 177 | 44 | 3 | 1 | 177 | 106 | 247 | 3.71e-57 | 183 |
| MsG0880043201.01.T01 | MTR_1g072300 | 33.190 | 232 | 150 | 2 | 4 | 235 | 262 | 488 | 9.52e-36 | 132 |
| MsG0880043201.01.T01 | MTR_8g069570 | 30.290 | 241 | 161 | 3 | 3 | 236 | 244 | 484 | 1.37e-31 | 121 |
| MsG0880043201.01.T01 | MTR_2g090290 | 30.841 | 214 | 138 | 3 | 4 | 209 | 254 | 465 | 1.55e-28 | 112 |
| MsG0880043201.01.T01 | MTR_1g086820 | 32.512 | 203 | 132 | 3 | 3 | 204 | 251 | 449 | 3.54e-28 | 111 |
| MsG0880043201.01.T01 | MTR_8g059115 | 30.364 | 247 | 158 | 4 | 2 | 235 | 163 | 408 | 7.37e-28 | 110 |
| MsG0880043201.01.T01 | MTR_3g099753 | 27.119 | 236 | 168 | 1 | 5 | 236 | 263 | 498 | 1.45e-27 | 110 |
| MsG0880043201.01.T01 | MTR_3g099753 | 27.119 | 236 | 168 | 1 | 5 | 236 | 287 | 522 | 1.81e-27 | 110 |
| MsG0880043201.01.T01 | MTR_8g465890 | 32.367 | 207 | 137 | 3 | 4 | 209 | 252 | 456 | 8.25e-26 | 105 |
| MsG0880043201.01.T01 | MTR_2g047855 | 31.308 | 214 | 143 | 4 | 4 | 215 | 253 | 464 | 3.36e-23 | 97.8 |
| MsG0880043201.01.T01 | MTR_2g013450 | 26.154 | 195 | 143 | 1 | 2 | 195 | 249 | 443 | 6.96e-17 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043201.01.T01 | AT1G02150 | 50.211 | 237 | 111 | 2 | 5 | 241 | 292 | 521 | 1.04e-79 | 249 |
| MsG0880043201.01.T01 | AT1G60770 | 30.928 | 194 | 132 | 1 | 3 | 194 | 244 | 437 | 1.69e-29 | 115 |
| MsG0880043201.01.T01 | AT5G27460 | 29.245 | 212 | 150 | 0 | 5 | 216 | 266 | 477 | 1.27e-28 | 113 |
| MsG0880043201.01.T01 | AT4G02820 | 30.732 | 205 | 140 | 1 | 4 | 208 | 282 | 484 | 1.38e-27 | 110 |
| MsG0880043201.01.T01 | AT2G20710 | 33.503 | 197 | 128 | 3 | 3 | 198 | 165 | 359 | 1.78e-26 | 106 |
| MsG0880043201.01.T01 | AT2G20710 | 33.503 | 197 | 128 | 3 | 3 | 198 | 260 | 454 | 4.55e-26 | 105 |
| MsG0880043201.01.T01 | AT4G21705 | 27.404 | 208 | 150 | 1 | 5 | 211 | 249 | 456 | 7.66e-22 | 94.0 |
| MsG0880043201.01.T01 | AT4G01990 | 26.699 | 206 | 150 | 1 | 3 | 208 | 261 | 465 | 7.02e-19 | 85.5 |
| MsG0880043201.01.T01 | AT1G28020 | 38.889 | 108 | 65 | 1 | 6 | 112 | 262 | 369 | 9.56e-16 | 76.6 |
| MsG0880043201.01.T01 | AT1G02370 | 33.010 | 103 | 69 | 0 | 3 | 105 | 293 | 395 | 2.26e-15 | 75.5 |
| MsG0880043201.01.T01 | AT1G80270 | 26.500 | 200 | 133 | 4 | 3 | 198 | 348 | 537 | 8.97e-12 | 64.7 |
| MsG0880043201.01.T01 | AT1G80270 | 26.500 | 200 | 133 | 4 | 3 | 198 | 348 | 537 | 8.97e-12 | 64.7 |
| MsG0880043201.01.T01 | AT1G80270 | 26.500 | 200 | 133 | 4 | 3 | 198 | 348 | 537 | 8.97e-12 | 64.7 |
| MsG0880043201.01.T01 | AT1G80270 | 26.500 | 200 | 133 | 4 | 3 | 198 | 348 | 537 | 8.97e-12 | 64.7 |
| MsG0880043201.01.T01 | AT1G80270 | 26.500 | 200 | 133 | 4 | 3 | 198 | 348 | 537 | 8.97e-12 | 64.7 |
| MsG0880043201.01.T01 | AT1G07590 | 26.000 | 200 | 144 | 2 | 3 | 199 | 286 | 484 | 3.79e-11 | 62.8 |
Find 53 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTCCCATGTAGTCAAATT+TGG | 0.254937 | 8:-20514593 | None:intergenic |
| TTCTGAGACGCTTTCGTGCT+TGG | 0.330616 | 8:+20514649 | MsG0880043201.01.T01:CDS |
| GAAACCCAAGCCAATAAAAT+TGG | 0.333547 | 8:+20514706 | MsG0880043201.01.T01:CDS |
| CTTCATCTTGACAAAGCTTA+AGG | 0.339454 | 8:-20514736 | None:intergenic |
| AAGACCGAGGGTAGAATATT+AGG | 0.348676 | 8:+20514254 | MsG0880043201.01.T01:CDS |
| CATTATCTCCTGAGTTTGTA+TGG | 0.359485 | 8:+20514296 | MsG0880043201.01.T01:CDS |
| TATTTCTTCTCTCGTAAGAA+TGG | 0.377223 | 8:+20514409 | MsG0880043201.01.T01:CDS |
| CCGCATATGCTTCATCGTTA+TGG | 0.390851 | 8:-20514811 | None:intergenic |
| CCCTCTGATGATTCTAGAAT+AGG | 0.408766 | 8:+20514482 | MsG0880043201.01.T01:CDS |
| CAGAAAAGCTTTACGAGGAA+TGG | 0.415843 | 8:+20514447 | MsG0880043201.01.T01:CDS |
| GTTTCCAAGTATACCTAACT+TGG | 0.418407 | 8:+20514373 | MsG0880043201.01.T01:CDS |
| ATTCTTTCAGTCCTGTTTGA+CGG | 0.431698 | 8:-20514854 | None:intergenic |
| ATAGCATGGTATCCCAAGTT+AGG | 0.432336 | 8:-20514386 | None:intergenic |
| ATAAGCTGGTATATTAAGAA+AGG | 0.440983 | 8:+20514515 | MsG0880043201.01.T01:CDS |
| ACGAGGAATGGGTTTCTGTA+AGG | 0.443573 | 8:+20514459 | MsG0880043201.01.T01:CDS |
| ATTGAGTTGTTGAGGAAGCC+AGG | 0.457519 | 8:+20514785 | MsG0880043201.01.T01:CDS |
| CGTAAGAATGGACGATATTG+AGG | 0.465330 | 8:+20514421 | MsG0880043201.01.T01:CDS |
| GCAAAGATGAACCGTCAAAC+AGG | 0.466263 | 8:+20514843 | MsG0880043201.01.T01:CDS |
| GCTTCATCGTTATGGTATCC+TGG | 0.467840 | 8:-20514803 | None:intergenic |
| TGACAAGTGATTCGAAGAGT+TGG | 0.467988 | 8:+20514684 | MsG0880043201.01.T01:CDS |
| AGAAAAGCTTTACGAGGAAT+GGG | 0.471834 | 8:+20514448 | MsG0880043201.01.T01:CDS |
| TATCCCAAGTTAGGTATACT+TGG | 0.477102 | 8:-20514377 | None:intergenic |
| TAGGAAACCTTCTCATAAGC+TGG | 0.515507 | 8:+20514501 | MsG0880043201.01.T01:CDS |
| TTGATTTATAGTTATTCCAC+AGG | 0.522855 | 8:-20514349 | None:intergenic |
| ATCAAAAGCTACTATCTACT+TGG | 0.530755 | 8:-20514931 | None:intergenic |
| TAAGCTGGTATATTAAGAAA+GGG | 0.530989 | 8:+20514516 | MsG0880043201.01.T01:CDS |
| CAACACTTCCATACAAACTC+AGG | 0.539796 | 8:-20514304 | None:intergenic |
| CTGAGTTTGTATGGAAGTGT+TGG | 0.541520 | 8:+20514305 | MsG0880043201.01.T01:CDS |
| TTCTTTAAGCATATGAGTGA+AGG | 0.550405 | 8:+20514560 | MsG0880043201.01.T01:CDS |
| AGGGTCATATTGCCGAAAAG+AGG | 0.552374 | 8:+20514624 | MsG0880043201.01.T01:CDS |
| GTAAGAATGGACGATATTGA+GGG | 0.554710 | 8:+20514422 | MsG0880043201.01.T01:CDS |
| GTATGGAAGTGTTGGAAACA+AGG | 0.554809 | 8:+20514313 | MsG0880043201.01.T01:CDS |
| AAACTCAGGAGATAATGAAA+AGG | 0.565979 | 8:-20514290 | None:intergenic |
| TCGACCTAATATTCTACCCT+CGG | 0.570101 | 8:-20514258 | None:intergenic |
| AGGACGAAGTTTACCGCCTG+TGG | 0.571432 | 8:+20514333 | MsG0880043201.01.T01:CDS |
| GATGTCCAAATTTGACTACA+TGG | 0.575923 | 8:+20514588 | MsG0880043201.01.T01:CDS |
| CAACAACTCAATTAAAACCT+CGG | 0.580666 | 8:-20514774 | None:intergenic |
| TAATATACCAGCTTATGAGA+AGG | 0.582826 | 8:-20514508 | None:intergenic |
| GGGTCATATTGCCGAAAAGA+GGG | 0.583094 | 8:+20514625 | MsG0880043201.01.T01:CDS |
| TTTCCAAGTATACCTAACTT+GGG | 0.589423 | 8:+20514374 | MsG0880043201.01.T01:CDS |
| TTTAAGCATATGAGTGAAGG+TGG | 0.593303 | 8:+20514563 | MsG0880043201.01.T01:CDS |
| TCCTATTCTAGAATCATCAG+AGG | 0.618071 | 8:-20514483 | None:intergenic |
| CGAGAGAAGAAATAATAGCA+TGG | 0.622616 | 8:-20514400 | None:intergenic |
| ATTTATAGTTATTCCACAGG+CGG | 0.629230 | 8:-20514346 | None:intergenic |
| TGATGTTGACAGTGAAAACA+TGG | 0.629492 | 8:+20514880 | MsG0880043201.01.T01:CDS |
| TTGTCAAGATGAAGACGACA+TGG | 0.631429 | 8:+20514745 | MsG0880043201.01.T01:CDS |
| CCTATTCTAGAATCATCAGA+GGG | 0.647606 | 8:-20514482 | None:intergenic |
| CCATAACGATGAAGCATATG+CGG | 0.648692 | 8:+20514811 | MsG0880043201.01.T01:CDS |
| AAGCATATGAGTGAAGGTGG+TGG | 0.657423 | 8:+20514566 | MsG0880043201.01.T01:CDS |
| ATGTCCAAATTTGACTACAT+GGG | 0.659932 | 8:+20514589 | MsG0880043201.01.T01:CDS |
| TAAGAATGGACGATATTGAG+GGG | 0.688947 | 8:+20514423 | MsG0880043201.01.T01:CDS |
| AAGAATGGACGATATTGAGG+GGG | 0.691386 | 8:+20514424 | MsG0880043201.01.T01:CDS |
| AGACGACATGGAGAGCGCCG+AGG | 0.710154 | 8:+20514757 | MsG0880043201.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATAAGCTGGTATATTAAGAA+AGG | + | Chr8:20514515-20514534 | MsG0880043201.01.T01:CDS | 25.0% |
| ! | TAAGCTGGTATATTAAGAAA+GGG | + | Chr8:20514516-20514535 | MsG0880043201.01.T01:CDS | 25.0% |
| ! | TTGATTTATAGTTATTCCAC+AGG | - | Chr8:20514352-20514371 | None:intergenic | 25.0% |
| AAACTCAGGAGATAATGAAA+AGG | - | Chr8:20514293-20514312 | None:intergenic | 30.0% | |
| ATGTCCAAATTTGACTACAT+GGG | + | Chr8:20514589-20514608 | MsG0880043201.01.T01:CDS | 30.0% | |
| ATTTATAGTTATTCCACAGG+CGG | - | Chr8:20514349-20514368 | None:intergenic | 30.0% | |
| CAACAACTCAATTAAAACCT+CGG | - | Chr8:20514777-20514796 | None:intergenic | 30.0% | |
| TAATATACCAGCTTATGAGA+AGG | - | Chr8:20514511-20514530 | None:intergenic | 30.0% | |
| TATTTCTTCTCTCGTAAGAA+TGG | + | Chr8:20514409-20514428 | MsG0880043201.01.T01:CDS | 30.0% | |
| TTCTTTAAGCATATGAGTGA+AGG | + | Chr8:20514560-20514579 | MsG0880043201.01.T01:CDS | 30.0% | |
| TTTCCAAGTATACCTAACTT+GGG | + | Chr8:20514374-20514393 | MsG0880043201.01.T01:CDS | 30.0% | |
| !!! | AGGTTTTAATTGAGTTGTTG+AGG | + | Chr8:20514777-20514796 | MsG0880043201.01.T01:CDS | 30.0% |
| AGAAAAGCTTTACGAGGAAT+GGG | + | Chr8:20514448-20514467 | MsG0880043201.01.T01:CDS | 35.0% | |
| ATTCTTTCAGTCCTGTTTGA+CGG | - | Chr8:20514857-20514876 | None:intergenic | 35.0% | |
| CATTATCTCCTGAGTTTGTA+TGG | + | Chr8:20514296-20514315 | MsG0880043201.01.T01:CDS | 35.0% | |
| CGAGAGAAGAAATAATAGCA+TGG | - | Chr8:20514403-20514422 | None:intergenic | 35.0% | |
| CTTCATCTTGACAAAGCTTA+AGG | - | Chr8:20514739-20514758 | None:intergenic | 35.0% | |
| GAAACCCAAGCCAATAAAAT+TGG | + | Chr8:20514706-20514725 | MsG0880043201.01.T01:CDS | 35.0% | |
| GATGTCCAAATTTGACTACA+TGG | + | Chr8:20514588-20514607 | MsG0880043201.01.T01:CDS | 35.0% | |
| GTAAGAATGGACGATATTGA+GGG | + | Chr8:20514422-20514441 | MsG0880043201.01.T01:CDS | 35.0% | |
| GTTTCCAAGTATACCTAACT+TGG | + | Chr8:20514373-20514392 | MsG0880043201.01.T01:CDS | 35.0% | |
| TAAGAATGGACGATATTGAG+GGG | + | Chr8:20514423-20514442 | MsG0880043201.01.T01:CDS | 35.0% | |
| TATCCCAAGTTAGGTATACT+TGG | - | Chr8:20514380-20514399 | None:intergenic | 35.0% | |
| TGATGTTGACAGTGAAAACA+TGG | + | Chr8:20514880-20514899 | MsG0880043201.01.T01:CDS | 35.0% | |
| TTTAAGCATATGAGTGAAGG+TGG | + | Chr8:20514563-20514582 | MsG0880043201.01.T01:CDS | 35.0% | |
| ! | AGGAATGCAGCCAATTTTAT+TGG | - | Chr8:20514719-20514738 | None:intergenic | 35.0% |
| !! | CCTATTCTAGAATCATCAGA+GGG | - | Chr8:20514485-20514504 | None:intergenic | 35.0% |
| !! | TCCTATTCTAGAATCATCAG+AGG | - | Chr8:20514486-20514505 | None:intergenic | 35.0% |
| AAGAATGGACGATATTGAGG+GGG | + | Chr8:20514424-20514443 | MsG0880043201.01.T01:CDS | 40.0% | |
| AAGACCGAGGGTAGAATATT+AGG | + | Chr8:20514254-20514273 | MsG0880043201.01.T01:CDS | 40.0% | |
| AGCTCCCATGTAGTCAAATT+TGG | - | Chr8:20514596-20514615 | None:intergenic | 40.0% | |
| ATAGCATGGTATCCCAAGTT+AGG | - | Chr8:20514389-20514408 | None:intergenic | 40.0% | |
| CAACACTTCCATACAAACTC+AGG | - | Chr8:20514307-20514326 | None:intergenic | 40.0% | |
| CAGAAAAGCTTTACGAGGAA+TGG | + | Chr8:20514447-20514466 | MsG0880043201.01.T01:CDS | 40.0% | |
| CCATAACGATGAAGCATATG+CGG | + | Chr8:20514811-20514830 | MsG0880043201.01.T01:CDS | 40.0% | |
| CGTAAGAATGGACGATATTG+AGG | + | Chr8:20514421-20514440 | MsG0880043201.01.T01:CDS | 40.0% | |
| GAGTGCTTAAAAAAGACCGA+GGG | + | Chr8:20514242-20514261 | MsG0880043201.01.T01:CDS | 40.0% | |
| TAGGAAACCTTCTCATAAGC+TGG | + | Chr8:20514501-20514520 | MsG0880043201.01.T01:CDS | 40.0% | |
| TCGACCTAATATTCTACCCT+CGG | - | Chr8:20514261-20514280 | None:intergenic | 40.0% | |
| TGACAAGTGATTCGAAGAGT+TGG | + | Chr8:20514684-20514703 | MsG0880043201.01.T01:CDS | 40.0% | |
| TTGTCAAGATGAAGACGACA+TGG | + | Chr8:20514745-20514764 | MsG0880043201.01.T01:CDS | 40.0% | |
| ! | ACATGGGAGCTTCTTTTTGA+GGG | + | Chr8:20514605-20514624 | MsG0880043201.01.T01:CDS | 40.0% |
| ! | AGAGTGCTTAAAAAAGACCG+AGG | + | Chr8:20514241-20514260 | MsG0880043201.01.T01:CDS | 40.0% |
| ! | CTGAGTTTGTATGGAAGTGT+TGG | + | Chr8:20514305-20514324 | MsG0880043201.01.T01:CDS | 40.0% |
| ! | TACATGGGAGCTTCTTTTTG+AGG | + | Chr8:20514604-20514623 | MsG0880043201.01.T01:CDS | 40.0% |
| !! | CCCTCTGATGATTCTAGAAT+AGG | + | Chr8:20514482-20514501 | MsG0880043201.01.T01:CDS | 40.0% |
| !! | GTATGGAAGTGTTGGAAACA+AGG | + | Chr8:20514313-20514332 | MsG0880043201.01.T01:CDS | 40.0% |
| !! | TGCAGCCAATTTTATTGGCT+TGG | - | Chr8:20514714-20514733 | None:intergenic | 40.0% |
| !!! | GCAGCCAATTTTATTGGCTT+GGG | - | Chr8:20514713-20514732 | None:intergenic | 40.0% |
| AAGCATATGAGTGAAGGTGG+TGG | + | Chr8:20514566-20514585 | MsG0880043201.01.T01:CDS | 45.0% | |
| AGGGTCATATTGCCGAAAAG+AGG | + | Chr8:20514624-20514643 | MsG0880043201.01.T01:CDS | 45.0% | |
| CCGCATATGCTTCATCGTTA+TGG | - | Chr8:20514814-20514833 | None:intergenic | 45.0% | |
| GCAAAGATGAACCGTCAAAC+AGG | + | Chr8:20514843-20514862 | MsG0880043201.01.T01:CDS | 45.0% | |
| GCTTCATCGTTATGGTATCC+TGG | - | Chr8:20514806-20514825 | None:intergenic | 45.0% | |
| GGGTCATATTGCCGAAAAGA+GGG | + | Chr8:20514625-20514644 | MsG0880043201.01.T01:CDS | 45.0% | |
| ! | ACGAGGAATGGGTTTCTGTA+AGG | + | Chr8:20514459-20514478 | MsG0880043201.01.T01:CDS | 45.0% |
| ! | ATTGAGTTGTTGAGGAAGCC+AGG | + | Chr8:20514785-20514804 | MsG0880043201.01.T01:CDS | 45.0% |
| ! | CGTCTCAGAAACCCTCTTTT+CGG | - | Chr8:20514639-20514658 | None:intergenic | 45.0% |
| !! | TTCTGAGACGCTTTCGTGCT+TGG | + | Chr8:20514649-20514668 | MsG0880043201.01.T01:CDS | 50.0% |
| AGGACGAAGTTTACCGCCTG+TGG | + | Chr8:20514333-20514352 | MsG0880043201.01.T01:CDS | 55.0% | |
| GGGGGCAGAAAAGCTTTACG+AGG | + | Chr8:20514442-20514461 | MsG0880043201.01.T01:CDS | 55.0% | |
| !! | AGACGACATGGAGAGCGCCG+AGG | + | Chr8:20514757-20514776 | MsG0880043201.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 20514218 | 20514952 | 20514218 | ID=MsG0880043201.01;Name=MsG0880043201.01 |
| Chr8 | mRNA | 20514218 | 20514952 | 20514218 | ID=MsG0880043201.01.T01;Parent=MsG0880043201.01;Name=MsG0880043201.01.T01;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|244 |
| Chr8 | exon | 20514218 | 20514952 | 20514218 | ID=MsG0880043201.01.T01:exon:11794;Parent=MsG0880043201.01.T01 |
| Chr8 | CDS | 20514218 | 20514952 | 20514218 | ID=MsG0880043201.01.T01:cds;Parent=MsG0880043201.01.T01 |
| Gene Sequence |
| Protein sequence |
