Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000624.01.T01 | AFK36654.1 | 93.443 | 122 | 8 | 0 | 1 | 122 | 272 | 393 | 2.33E-73 | 239 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000624.01.T01 | I3S8R2 | 93.443 | 122 | 8 | 0 | 1 | 122 | 272 | 393 | 1.11e-73 | 239 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048065.01 | MsG0180000624.01 | 0.826699 | 2.350480e-54 | 2.220741e-51 |
MsG0080048463.01 | MsG0180000624.01 | 0.814940 | 1.192618e-51 | 8.111170e-49 |
MsG0180000624.01 | MsG0180000782.01 | 0.807806 | 4.223110e-50 | 2.374794e-47 |
MsG0180000624.01 | MsG0180000785.01 | 0.809423 | 1.906255e-50 | 1.118809e-47 |
MsG0180000624.01 | MsG0180001356.01 | 0.804564 | 2.033335e-49 | 1.051788e-46 |
MsG0180000624.01 | MsG0180003353.01 | 0.835423 | 1.692829e-56 | 2.069157e-53 |
MsG0180000624.01 | MsG0180003815.01 | 0.809176 | 2.153348e-50 | 1.255515e-47 |
MsG0180000624.01 | MsG0180003885.01 | 0.804320 | 2.286331e-49 | 1.175247e-46 |
MsG0180000624.01 | MsG0180004493.01 | 0.800362 | 1.493610e-48 | 6.941424e-46 |
MsG0180000624.01 | MsG0180005169.01 | 0.861057 | 1.340270e-63 | 3.742482e-60 |
MsG0180000624.01 | MsG0180006031.01 | 0.809880 | 1.520777e-50 | 9.033950e-48 |
MsG0180000624.01 | MsG0180006096.01 | 0.814299 | 1.653186e-51 | 1.105180e-48 |
MsG0180000624.01 | MsG0280006309.01 | 0.812662 | 3.786764e-51 | 2.421972e-48 |
MsG0180000624.01 | MsG0280006937.01 | 0.800355 | 1.498624e-48 | 6.963464e-46 |
MsG0180000624.01 | MsG0280006996.01 | 0.816684 | 4.871548e-52 | 3.475060e-49 |
MsG0180000624.01 | MsG0280007118.01 | 0.817208 | 3.715555e-52 | 2.688820e-49 |
MsG0180000624.01 | MsG0280007307.01 | 0.829285 | 5.608412e-55 | 5.715457e-52 |
MsG0180000624.01 | MsG0280007903.01 | 0.806351 | 8.582497e-50 | 4.647891e-47 |
MsG0180000624.01 | MsG0280008429.01 | 0.800849 | 1.188093e-48 | 5.590240e-46 |
MsG0180000624.01 | MsG0280009256.01 | 0.818097 | 2.341302e-52 | 1.736061e-49 |
MsG0180000624.01 | MsG0280011339.01 | 0.803361 | 3.617029e-49 | 1.813923e-46 |
MsG0180000624.01 | MsG0380011581.01 | 0.814583 | 1.430919e-51 | 9.639169e-49 |
MsG0180000624.01 | MsG0380013085.01 | 0.818181 | 2.240866e-52 | 1.665545e-49 |
MsG0180000624.01 | MsG0380013295.01 | -0.802700 | 4.953801e-49 | 2.442933e-46 |
MsG0180000624.01 | MsG0380015784.01 | 0.808669 | 2.764289e-50 | 1.590069e-47 |
MsG0180000624.01 | MsG0380016529.01 | 0.832697 | 8.152666e-56 | 9.183210e-53 |
MsG0180000624.01 | MsG0380016540.01 | 0.818377 | 2.023390e-52 | 1.512164e-49 |
MsG0180000624.01 | MsG0380016671.01 | 0.820613 | 6.254168e-53 | 4.972214e-50 |
MsG0180000624.01 | MsG0380017202.01 | 0.804209 | 2.410386e-49 | 1.235486e-46 |
MsG0180000624.01 | MsG0380017293.01 | 0.830675 | 2.569447e-55 | 2.726141e-52 |
MsG0180000624.01 | MsG0380017663.01 | 0.819665 | 1.030857e-52 | 7.983050e-50 |
MsG0180000624.01 | MsG0380017931.01 | 0.807971 | 3.894053e-50 | 2.199300e-47 |
MsG0180000624.01 | MsG0380017947.01 | 0.817854 | 2.656353e-52 | 1.956738e-49 |
MsG0180000624.01 | MsG0480018091.01 | -0.800379 | 1.481750e-48 | 6.889324e-46 |
MsG0180000624.01 | MsG0480018218.01 | 0.808973 | 2.380720e-50 | 1.380486e-47 |
MsG0180000624.01 | MsG0480018584.01 | 0.821307 | 4.329486e-53 | 3.509435e-50 |
MsG0180000624.01 | MsG0480018911.01 | 0.830113 | 3.525809e-55 | 3.679966e-52 |
MsG0180000624.01 | MsG0480023073.01 | 0.802214 | 6.238639e-49 | 3.038556e-46 |
MsG0180000624.01 | MsG0480023489.01 | 0.800445 | 1.436759e-48 | 6.691071e-46 |
MsG0180000624.01 | MsG0480024030.01 | 0.806320 | 8.709075e-50 | 4.712862e-47 |
MsG0180000624.01 | MsG0580025055.01 | 0.803666 | 3.126717e-49 | 1.580411e-46 |
MsG0180000624.01 | MsG0580026159.01 | -0.817371 | 3.413364e-52 | 2.481329e-49 |
MsG0180000624.01 | MsG0580027980.01 | 0.810372 | 1.191217e-50 | 7.167781e-48 |
MsG0180000624.01 | MsG0580028630.01 | 0.800962 | 1.126730e-48 | 5.316881e-46 |
MsG0180000624.01 | MsG0580029879.01 | 0.806727 | 7.147528e-50 | 3.908289e-47 |
MsG0180000624.01 | MsG0680030515.01 | 0.811988 | 5.315404e-51 | 3.338641e-48 |
MsG0180000624.01 | MsG0680031492.01 | 0.815257 | 1.014318e-51 | 6.958253e-49 |
MsG0180000624.01 | MsG0680031640.01 | 0.801516 | 8.677729e-49 | 4.152408e-46 |
MsG0180000624.01 | MsG0680031939.01 | 0.828998 | 6.582486e-55 | 6.649748e-52 |
MsG0180000624.01 | MsG0680032809.01 | 0.816858 | 4.451860e-52 | 3.191020e-49 |
MsG0180000624.01 | MsG0680032827.01 | 0.806231 | 9.095423e-50 | 4.911036e-47 |
MsG0180000624.01 | MsG0680035877.01 | 0.841562 | 4.406173e-58 | 6.499669e-55 |
MsG0180000624.01 | MsG0780036585.01 | 0.802568 | 5.275600e-49 | 2.592687e-46 |
MsG0180000624.01 | MsG0780036659.01 | 0.818370 | 2.031312e-52 | 1.517771e-49 |
MsG0180000624.01 | MsG0780036757.01 | 0.806607 | 7.578036e-50 | 4.130850e-47 |
MsG0180000624.01 | MsG0780038377.01 | 0.811078 | 8.379474e-51 | 5.138017e-48 |
MsG0180000624.01 | MsG0780040430.01 | 0.801774 | 7.681923e-49 | 3.699876e-46 |
MsG0180000624.01 | MsG0780040763.01 | 0.807701 | 4.445463e-50 | 2.492972e-47 |
MsG0180000624.01 | MsG0780041091.01 | 0.810574 | 1.077525e-50 | 6.518536e-48 |
MsG0180000624.01 | MsG0780041391.01 | 0.839056 | 1.990443e-57 | 2.716644e-54 |
MsG0180000624.01 | MsG0780041435.01 | 0.820917 | 5.324080e-53 | 4.269193e-50 |
MsG0180000624.01 | MsG0780041673.01 | 0.835128 | 2.008953e-56 | 2.433731e-53 |
MsG0180000624.01 | MsG0780041692.01 | 0.804831 | 1.788637e-49 | 9.316730e-47 |
MsG0180000624.01 | MsG0880043201.01 | 0.805157 | 1.528947e-49 | 8.030735e-47 |
MsG0180000624.01 | MsG0880044005.01 | 0.809200 | 2.128576e-50 | 1.241888e-47 |
MsG0180000624.01 | MsG0880044487.01 | 0.818848 | 1.581916e-52 | 1.197693e-49 |
MsG0180000624.01 | MsG0880047538.01 | 0.818711 | 1.699432e-52 | 1.281693e-49 |
MsG0180000624.01 | MsG0880047754.01 | 0.844607 | 6.808938e-59 | 1.105104e-55 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000624.01.T01 | MTR_1g011690 | 93.443 | 122 | 8 | 0 | 1 | 122 | 272 | 393 | 3.39e-77 | 239 |
MsG0180000624.01.T01 | MTR_1g011700 | 83.607 | 122 | 20 | 0 | 1 | 122 | 240 | 361 | 1.99e-67 | 213 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000624.01.T01 | AT5G11330 | 74.561 | 114 | 29 | 0 | 1 | 114 | 269 | 382 | 5.09e-55 | 181 |
Find 48 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCTCTTTCCTTGCTGACT+TGG | 0.284884 | 1:-8791306 | None:intergenic |
TTGTCATGTTTGTGCTTCTA+AGG | 0.298117 | 1:-8791105 | None:intergenic |
ATCCCTTGGAGAAGATATTC+TGG | 0.324905 | 1:+8791032 | MsG0180000624.01.T01:CDS |
TGGATCAAAGGATCTCTATC+AGG | 0.331457 | 1:-8791286 | None:intergenic |
CTAAGGTAGTGAGGCGTAGT+AGG | 0.337106 | 1:-8791088 | None:intergenic |
GTTCTTCATGCAAGGCTTCT+CGG | 0.373562 | 1:+8791238 | MsG0180000624.01.T01:CDS |
TAGGCAAATGCATAGAGAAA+TGG | 0.381893 | 1:+8791146 | MsG0180000624.01.T01:CDS |
ATATTAGATGCAGCGGTGTT+AGG | 0.401522 | 1:+8791127 | MsG0180000624.01.T01:CDS |
TGAAAAGCTTGAATCGGCTT+TGG | 0.407533 | 1:+8791174 | MsG0180000624.01.T01:CDS |
TAATGAACATTCTTAAGTAC+TGG | 0.416230 | 1:+8791907 | MsG0180000624.01.T01:CDS |
AGAACTTGCTTGGAAGTAAC+TGG | 0.427168 | 1:-8791220 | None:intergenic |
TCCTTGCTGACTTGGATCAA+AGG | 0.435046 | 1:-8791298 | None:intergenic |
AGGCAAATGCATAGAGAAAT+GGG | 0.438389 | 1:+8791147 | MsG0180000624.01.T01:CDS |
TTGTAGAACGGACATTGATC+AGG | 0.445098 | 1:+8791814 | MsG0180000624.01.T01:CDS |
TTCATGACCTTTGCTAACTC+AGG | 0.460263 | 1:-8790968 | None:intergenic |
CGGTCGCATAAAACAAGGTC+TGG | 0.461955 | 1:+8791258 | MsG0180000624.01.T01:CDS |
CCAAGCAAGTTCTTCATGCA+AGG | 0.473413 | 1:+8791230 | MsG0180000624.01.T01:CDS |
CCTTGCATGAAGAACTTGCT+TGG | 0.475601 | 1:-8791230 | None:intergenic |
TTCTTATCCACAGCATCATA+AGG | 0.480398 | 1:+8791933 | MsG0180000624.01.T01:CDS |
ATTCTGGGACAATGTGGTAT+TGG | 0.484504 | 1:+8791048 | MsG0180000624.01.T01:CDS |
CATATATGATAGTGATCCCT+TGG | 0.487961 | 1:+8791018 | MsG0180000624.01.T01:CDS |
CTGTCTAATGTGTGAGGACG+AGG | 0.493330 | 1:-8791708 | None:intergenic |
GGAAGCTGAAAAGCTTGAAT+CGG | 0.497109 | 1:+8791168 | MsG0180000624.01.T01:CDS |
TGGGACAATGTGGTATTGGT+AGG | 0.524425 | 1:+8791052 | MsG0180000624.01.T01:CDS |
TCATATATGAAATTTAAGAA+AGG | 0.530399 | 1:-8791004 | None:intergenic |
TCCCTTGGAGAAGATATTCT+GGG | 0.532438 | 1:+8791033 | MsG0180000624.01.T01:CDS |
TTATGATGCTGTGGATAAGA+AGG | 0.532776 | 1:-8791931 | None:intergenic |
TAAGGTAGTGAGGCGTAGTA+GGG | 0.552562 | 1:-8791087 | None:intergenic |
GGGACAATGTGGTATTGGTA+GGG | 0.556947 | 1:+8791053 | MsG0180000624.01.T01:CDS |
ATCCAAGTCAGCAAGGAAAG+AGG | 0.561259 | 1:+8791304 | MsG0180000624.01.T01:CDS |
GTCCCAGAATATCTTCTCCA+AGG | 0.564956 | 1:-8791035 | None:intergenic |
TCCCAGAATATCTTCTCCAA+GGG | 0.587316 | 1:-8791034 | None:intergenic |
GGACAATGTGGTATTGGTAG+GGG | 0.607883 | 1:+8791054 | MsG0180000624.01.T01:CDS |
GGATCAAAGGATCTCTATCA+GGG | 0.608135 | 1:-8791285 | None:intergenic |
CTTCTCGGTCGCATAAAACA+AGG | 0.609601 | 1:+8791253 | MsG0180000624.01.T01:CDS |
TCCTTTGATCCAAGTCAGCA+AGG | 0.611960 | 1:+8791297 | MsG0180000624.01.T01:CDS |
CATGACAATATTAGATGCAG+CGG | 0.616705 | 1:+8791120 | MsG0180000624.01.T01:CDS |
AATGTCCGTTCTACAAAACA+AGG | 0.617089 | 1:-8791807 | None:intergenic |
ACATTGATCAGGTCTTGTAT+CGG | 0.620081 | 1:+8791825 | MsG0180000624.01.T01:CDS |
TTGGTGGCCTTATGATGCTG+TGG | 0.628557 | 1:-8791940 | None:intergenic |
AAATCACTGTCTAATGTGTG+AGG | 0.641880 | 1:-8791714 | None:intergenic |
ATGGATTCCTGAGTTAGCAA+AGG | 0.642615 | 1:+8790961 | MsG0180000624.01.T01:CDS |
TTTGTGCTTCTAAGGTAGTG+AGG | 0.645723 | 1:-8791097 | None:intergenic |
GAAGATATTCTGGGACAATG+TGG | 0.671683 | 1:+8791042 | MsG0180000624.01.T01:CDS |
AAAGGTCATGAAAGAAACGA+AGG | 0.680367 | 1:+8790979 | MsG0180000624.01.T01:CDS |
TTTCTGAAAGTAGAAGCTCA+CGG | 0.705046 | 1:+8791666 | MsG0180000624.01.T01:CDS |
CGAGGTCTGTGCGGACACGA+AGG | 0.707477 | 1:-8791690 | None:intergenic |
GTGTGAGGACGAGGTCTGTG+CGG | 0.730763 | 1:-8791699 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCATATATGAAATTTAAGAA+AGG | - | Chr1:8791007-8791026 | None:intergenic | 15.0% |
!! | TTATTTGACAATTAAGATTA+TGG | + | Chr1:8791461-8791480 | MsG0180000624.01.T01:intron | 15.0% |
!!! | AATGTTCATTAAATTTTCAT+TGG | - | Chr1:8791898-8791917 | None:intergenic | 15.0% |
!! | TTACTTGAAATTGTAAAAGT+CGG | + | Chr1:8791532-8791551 | MsG0180000624.01.T01:intron | 20.0% |
!! | TTTGGAAAAAGAAAAGTAAA+CGG | - | Chr1:8791590-8791609 | None:intergenic | 20.0% |
!!! | TAGTTTTTGTTACACTAATA+AGG | + | Chr1:8791422-8791441 | MsG0180000624.01.T01:intron | 20.0% |
! | AAATTAGCATCACAATTTGA+AGG | + | Chr1:8791608-8791627 | MsG0180000624.01.T01:intron | 25.0% |
! | ACATCTTCAATTTGATTGTA+TGG | + | Chr1:8791393-8791412 | MsG0180000624.01.T01:intron | 25.0% |
! | GATAAATGTTGTTCATTTAC+GGG | - | Chr1:8791568-8791587 | None:intergenic | 25.0% |
! | GGATAAATGTTGTTCATTTA+CGG | - | Chr1:8791569-8791588 | None:intergenic | 25.0% |
! | TAATGAACATTCTTAAGTAC+TGG | + | Chr1:8791907-8791926 | MsG0180000624.01.T01:CDS | 25.0% |
!! | ACATTAGACAGTGATTTTAT+TGG | + | Chr1:8791720-8791739 | MsG0180000624.01.T01:CDS | 25.0% |
!! | TCAAATTGTGATGCTAATTT+TGG | - | Chr1:8791608-8791627 | None:intergenic | 25.0% |
!!! | ATTATCCTTGTTTTGTAGAA+CGG | + | Chr1:8791802-8791821 | MsG0180000624.01.T01:CDS | 25.0% |
!!! | TGATTTTATTGGTGTTGATT+CGG | + | Chr1:8791731-8791750 | MsG0180000624.01.T01:CDS | 25.0% |
!! | AATGAATGAGTTGAGTTTTG+AGG | - | Chr1:8791785-8791804 | None:intergenic | 30.0% |
!! | ATTTTCATTGGTGACACTTT+TGG | - | Chr1:8791886-8791905 | None:intergenic | 30.0% |
!! | TTTTCATTGGTGACACTTTT+GGG | - | Chr1:8791885-8791904 | None:intergenic | 30.0% |
AAAGGTCATGAAAGAAACGA+AGG | + | Chr1:8790979-8790998 | MsG0180000624.01.T01:CDS | 35.0% | |
AAATCACTGTCTAATGTGTG+AGG | - | Chr1:8791717-8791736 | None:intergenic | 35.0% | |
AATGTCCGTTCTACAAAACA+AGG | - | Chr1:8791810-8791829 | None:intergenic | 35.0% | |
AATTGTCAAATAAACTGCCC+AGG | - | Chr1:8791454-8791473 | None:intergenic | 35.0% | |
ACCAAGAAGCAGAAAAAGTA+TGG | + | Chr1:8790942-8790961 | MsG0180000624.01.T01:CDS | 35.0% | |
AGGCAAATGCATAGAGAAAT+GGG | + | Chr1:8791147-8791166 | MsG0180000624.01.T01:CDS | 35.0% | |
CATGACAATATTAGATGCAG+CGG | + | Chr1:8791120-8791139 | MsG0180000624.01.T01:CDS | 35.0% | |
GTAACAGAAGCAAATGACAA+AGG | - | Chr1:8791375-8791394 | None:intergenic | 35.0% | |
TAGGCAAATGCATAGAGAAA+TGG | + | Chr1:8791146-8791165 | MsG0180000624.01.T01:CDS | 35.0% | |
TTATGATGCTGTGGATAAGA+AGG | - | Chr1:8791934-8791953 | None:intergenic | 35.0% | |
TTGTCATGTTTGTGCTTCTA+AGG | - | Chr1:8791108-8791127 | None:intergenic | 35.0% | |
! | ACATTGATCAGGTCTTGTAT+CGG | + | Chr1:8791825-8791844 | MsG0180000624.01.T01:CDS | 35.0% |
! | CATATATGATAGTGATCCCT+TGG | + | Chr1:8791018-8791037 | MsG0180000624.01.T01:CDS | 35.0% |
! | TTTCTGAAAGTAGAAGCTCA+CGG | + | Chr1:8791666-8791685 | MsG0180000624.01.T01:CDS | 35.0% |
!!! | TCCATACTTTTTCTGCTTCT+TGG | - | Chr1:8790946-8790965 | None:intergenic | 35.0% |
ATATTAGATGCAGCGGTGTT+AGG | + | Chr1:8791127-8791146 | MsG0180000624.01.T01:CDS | 40.0% | |
ATCCCTTGGAGAAGATATTC+TGG | + | Chr1:8791032-8791051 | MsG0180000624.01.T01:CDS | 40.0% | |
ATGGATTCCTGAGTTAGCAA+AGG | + | Chr1:8790961-8790980 | MsG0180000624.01.T01:CDS | 40.0% | |
GGAAGCTGAAAAGCTTGAAT+CGG | + | Chr1:8791168-8791187 | MsG0180000624.01.T01:CDS | 40.0% | |
GGATCAAAGGATCTCTATCA+GGG | - | Chr1:8791288-8791307 | None:intergenic | 40.0% | |
TCCCAGAATATCTTCTCCAA+GGG | - | Chr1:8791037-8791056 | None:intergenic | 40.0% | |
TCCCTTGGAGAAGATATTCT+GGG | + | Chr1:8791033-8791052 | MsG0180000624.01.T01:CDS | 40.0% | |
TGGATCAAAGGATCTCTATC+AGG | - | Chr1:8791289-8791308 | None:intergenic | 40.0% | |
TTCAGAAAACAGTGTCTGTG+CGG | - | Chr1:8791654-8791673 | None:intergenic | 40.0% | |
TTCATGACCTTTGCTAACTC+AGG | - | Chr1:8790971-8790990 | None:intergenic | 40.0% | |
TTGTAGAACGGACATTGATC+AGG | + | Chr1:8791814-8791833 | MsG0180000624.01.T01:CDS | 40.0% | |
! | AGAACTTGCTTGGAAGTAAC+TGG | - | Chr1:8791223-8791242 | None:intergenic | 40.0% |
! | TGAAAAGCTTGAATCGGCTT+TGG | + | Chr1:8791174-8791193 | MsG0180000624.01.T01:CDS | 40.0% |
!! | ATTCTGGGACAATGTGGTAT+TGG | + | Chr1:8791048-8791067 | MsG0180000624.01.T01:CDS | 40.0% |
!! | GAAGATATTCTGGGACAATG+TGG | + | Chr1:8791042-8791061 | MsG0180000624.01.T01:CDS | 40.0% |
!! | TTTGTGCTTCTAAGGTAGTG+AGG | - | Chr1:8791100-8791119 | None:intergenic | 40.0% |
ACACTAATAAGGCGATTGCC+TGG | + | Chr1:8791433-8791452 | MsG0180000624.01.T01:intron | 45.0% | |
ATCCAAGTCAGCAAGGAAAG+AGG | + | Chr1:8791304-8791323 | MsG0180000624.01.T01:CDS | 45.0% | |
CACTAATAAGGCGATTGCCT+GGG | + | Chr1:8791434-8791453 | MsG0180000624.01.T01:intron | 45.0% | |
CCAAGCAAGTTCTTCATGCA+AGG | + | Chr1:8791230-8791249 | MsG0180000624.01.T01:CDS | 45.0% | |
CTTCTCGGTCGCATAAAACA+AGG | + | Chr1:8791253-8791272 | MsG0180000624.01.T01:CDS | 45.0% | |
GTCCCAGAATATCTTCTCCA+AGG | - | Chr1:8791038-8791057 | None:intergenic | 45.0% | |
GTTCTTCATGCAAGGCTTCT+CGG | + | Chr1:8791238-8791257 | MsG0180000624.01.T01:CDS | 45.0% | |
TAAGGTAGTGAGGCGTAGTA+GGG | - | Chr1:8791090-8791109 | None:intergenic | 45.0% | |
TCCTTTGATCCAAGTCAGCA+AGG | + | Chr1:8791297-8791316 | MsG0180000624.01.T01:CDS | 45.0% | |
! | CCTTGCATGAAGAACTTGCT+TGG | - | Chr1:8791233-8791252 | None:intergenic | 45.0% |
!! | GGACAATGTGGTATTGGTAG+GGG | + | Chr1:8791054-8791073 | MsG0180000624.01.T01:CDS | 45.0% |
!! | GGGACAATGTGGTATTGGTA+GGG | + | Chr1:8791053-8791072 | MsG0180000624.01.T01:CDS | 45.0% |
!! | TCATTGGTGACACTTTTGGG+AGG | - | Chr1:8791882-8791901 | None:intergenic | 45.0% |
!! | TCCTTGCTGACTTGGATCAA+AGG | - | Chr1:8791301-8791320 | None:intergenic | 45.0% |
!! | TGGGACAATGTGGTATTGGT+AGG | + | Chr1:8791052-8791071 | MsG0180000624.01.T01:CDS | 45.0% |
CGGTCGCATAAAACAAGGTC+TGG | + | Chr1:8791258-8791277 | MsG0180000624.01.T01:CDS | 50.0% | |
CTAAGGTAGTGAGGCGTAGT+AGG | - | Chr1:8791091-8791110 | None:intergenic | 50.0% | |
CTGTCTAATGTGTGAGGACG+AGG | - | Chr1:8791711-8791730 | None:intergenic | 50.0% | |
! | CTCCTCTTTCCTTGCTGACT+TGG | - | Chr1:8791309-8791328 | None:intergenic | 50.0% |
!! | AGCAAGGAAAGAGGAGTGTC+AGG | + | Chr1:8791313-8791332 | MsG0180000624.01.T01:intron | 50.0% |
!! | GCAAGGAAAGAGGAGTGTCA+GGG | + | Chr1:8791314-8791333 | MsG0180000624.01.T01:intron | 50.0% |
GTGTGAGGACGAGGTCTGTG+CGG | - | Chr1:8791702-8791721 | None:intergenic | 60.0% | |
CGAGGTCTGTGCGGACACGA+AGG | - | Chr1:8791693-8791712 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 8790938 | 8791953 | 8790938 | ID=MsG0180000624.01;Name=MsG0180000624.01 |
Chr1 | mRNA | 8790938 | 8791953 | 8790938 | ID=MsG0180000624.01.T01;Parent=MsG0180000624.01;Name=MsG0180000624.01.T01;_AED=0.58;_eAED=0.58;_QI=0|0|0|0.5|1|1|2|0|228 |
Chr1 | exon | 8790938 | 8791329 | 8790938 | ID=MsG0180000624.01.T01:exon:2243;Parent=MsG0180000624.01.T01 |
Chr1 | exon | 8791659 | 8791953 | 8791659 | ID=MsG0180000624.01.T01:exon:2242;Parent=MsG0180000624.01.T01 |
Chr1 | CDS | 8790938 | 8791329 | 8790938 | ID=MsG0180000624.01.T01:cds;Parent=MsG0180000624.01.T01 |
Chr1 | CDS | 8791659 | 8791953 | 8791659 | ID=MsG0180000624.01.T01:cds;Parent=MsG0180000624.01.T01 |
Gene Sequence |
Protein sequence |