AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010366.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010366.01.T01 MTR_2g082940 95.181 83 4 0 104 186 282 364 1.77e-45 157
MsG0280010366.01.T01 MTR_2g082940 67.200 125 37 3 1 121 1 125 5.97e-31 119
MsG0280010366.01.T01 MTR_2g082940 95.238 84 4 0 104 187 282 365 3.82e-45 159
MsG0280010366.01.T01 MTR_2g082940 67.200 125 37 3 1 121 1 125 2.71e-30 119
MsG0280010366.01.T01 MTR_2g082940 90.909 55 5 0 222 276 469 523 5.84e-26 107
MsG0280010366.01.T01 MTR_4g081220 60.714 84 33 0 104 187 287 370 3.26e-24 102
MsG0280010366.01.T01 MTR_7g007510 39.655 116 63 4 76 187 200 312 2.15e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010366.01.T01 AT4G04790 35.870 92 59 0 101 192 130 221 4.12e-11 63.5
MsG0280010366.01.T01 AT4G04790 35.870 92 59 0 101 192 267 358 4.20e-11 63.5
MsG0280010366.01.T01 AT4G04790 35.870 92 59 0 101 192 263 354 4.56e-11 63.5

Find 54 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTATAGCGAAGGTATTTC+AGG 0.153900 2:-68576127 MsG0280010366.01.T01:CDS
TGTTGCAGAAAATTATTTAT+TGG 0.184539 2:-68576229 MsG0280010366.01.T01:intron
GTTCATACAATTGCATAAAA+AGG 0.191530 2:+68573744 None:intergenic
TGAACGGAAGGAGAATATTT+TGG 0.198209 2:-68576193 MsG0280010366.01.T01:CDS
CACTTGCTTTGAAGTCTAAA+AGG 0.279870 2:+68576064 None:intergenic
TACATATACCCCTCTTATTA+AGG 0.287708 2:+68573076 None:intergenic
AGAAGAATGAAGGTTGAATT+TGG 0.290693 2:+68578459 None:intergenic
GCATCAACTTTCTCGGTATC+AGG 0.309961 2:+68577356 None:intergenic
GATTTCCTTACCGATAAATC+TGG 0.343525 2:+68575675 None:intergenic
TTTGGAGGTGTTGGAAATCA+TGG 0.355242 2:-68576175 MsG0280010366.01.T01:CDS
CATGCAAGTTTGCCGATGAT+TGG 0.365015 2:+68573217 None:intergenic
ATAACTTTGCTACCAACAAT+AGG 0.365269 2:-68573044 MsG0280010366.01.T01:three_prime_UTR
CTTCATCGAAACTCTGATTC+AGG 0.384389 2:-68578368 MsG0280010366.01.T01:intron
TGAAGGATAAGCTTGGTCTT+TGG 0.385335 2:-68573178 MsG0280010366.01.T01:CDS
ATTTGCAGCATCAACTTTCT+CGG 0.387502 2:+68577349 None:intergenic
AGCATTATGTGAATTATCAT+TGG 0.388644 2:+68573109 None:intergenic
AGTCAGCATTCCAGATTTAT+CGG 0.389720 2:-68575685 MsG0280010366.01.T01:CDS
ATATTACTCTGAGGTACGTT+TGG 0.413517 2:+68577293 None:intergenic
CTGTTTCTGTAATGTAGAAA+TGG 0.417919 2:+68581280 None:intergenic
AAAAGGAGCTCCTCTGCAAC+AGG 0.440881 2:+68576081 None:intergenic
TCGTAGAAATTGTTGTTTGT+GGG 0.445232 2:+68572998 None:intergenic
GGGCATGGGAAGACTACTAT+TGG 0.452951 2:-68576106 MsG0280010366.01.T01:CDS
GAATGAGGCTCCTTAATAAG+AGG 0.454545 2:-68573086 MsG0280010366.01.T01:exon
GTGCTGGTGTACATACAAAT+TGG 0.458212 2:-68573022 MsG0280010366.01.T01:three_prime_UTR
TTCGTAGAAATTGTTGTTTG+TGG 0.476336 2:+68572997 None:intergenic
AGCGAAGGTATTTCAGGGCA+TGG 0.502272 2:-68576121 MsG0280010366.01.T01:CDS
TTAGAAATGAAGGATAAGCT+TGG 0.520450 2:-68573185 MsG0280010366.01.T01:CDS
CAATCATCGGCAAACTTGCA+TGG 0.537585 2:-68573216 MsG0280010366.01.T01:CDS
TGGCTCTTTGTGAGAGTGAA+CGG 0.537633 2:-68576209 MsG0280010366.01.T01:CDS
AATTCACATAATGCTGAATG+AGG 0.542846 2:-68573101 MsG0280010366.01.T01:exon
AAACACACCGTAGAAAATAG+AGG 0.544534 2:+68578112 None:intergenic
TGTACACCAGCACCTATTGT+TGG 0.550756 2:+68573032 None:intergenic
ATCTGTTGGCTCTATAGCGA+AGG 0.552442 2:-68576136 MsG0280010366.01.T01:CDS
GACATACTTCCAATTGATGT+AGG 0.553143 2:+68573680 None:intergenic
TCTATAGCGAAGGTATTTCA+GGG 0.555285 2:-68576126 MsG0280010366.01.T01:CDS
CTGAATCAGAGTTTCGATGA+AGG 0.558138 2:+68578369 None:intergenic
TTATCATTGGCATTTGCAGA+AGG 0.563671 2:+68573122 None:intergenic
CGATGAAGGTGAGGCTTGCG+AGG 0.564387 2:+68578383 None:intergenic
GCATTCCAGATTTATCGGTA+AGG 0.567353 2:-68575680 MsG0280010366.01.T01:CDS
GACTGTGTAACTAGCAATGA+AGG 0.573585 2:+68575704 None:intergenic
TTGCTACCAACAATAGGTGC+TGG 0.573679 2:-68573038 MsG0280010366.01.T01:three_prime_UTR
GCGAAGGTATTTCAGGGCAT+GGG 0.574736 2:-68576120 MsG0280010366.01.T01:CDS
TTCAATGTTGACAAGAAGCA+TGG 0.578667 2:-68573715 MsG0280010366.01.T01:CDS
AATGAGGCTCCTTAATAAGA+GGG 0.586870 2:-68573085 MsG0280010366.01.T01:exon
TGGTGGTGAATGTGTACGAA+GGG 0.613014 2:+68578479 None:intergenic
AAGAGTCAGAAACCAATCAT+CGG 0.615923 2:-68573229 MsG0280010366.01.T01:CDS
TCAGAGTTTCGATGAAGGTG+AGG 0.616658 2:+68578374 None:intergenic
TGCAGATGAATTGTCTGAAG+CGG 0.616945 2:-68578148 MsG0280010366.01.T01:intron
TCTTTGTGAGAGTGAACGGA+AGG 0.632162 2:-68576205 MsG0280010366.01.T01:CDS
AGAATGAAGGTTGAATTTGG+TGG 0.635728 2:+68578462 None:intergenic
ACTATTGGAACCTGTTGCAG+AGG 0.644044 2:-68576091 MsG0280010366.01.T01:CDS
TTGGTGGTGAATGTGTACGA+AGG 0.673115 2:+68578478 None:intergenic
ATGAGGCTCCTTAATAAGAG+GGG 0.691913 2:-68573084 MsG0280010366.01.T01:exon
GGTGGTGAATGTGTACGAAG+GGG 0.760514 2:+68578480 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGTATATATATAAAAATAT+TGG - Chr2:68574321-68574340 MsG0280010366.01.T01:intron 10.0%
!! CATTATTATATTGATAAAAA+TGG + Chr2:68573327-68573346 None:intergenic 10.0%
!!! CATTTTTATCAATATAATAA+TGG - Chr2:68573325-68573344 MsG0280010366.01.T01:intron 10.0%
!!! TTATAGTTAATTTTATTCAT+AGG + Chr2:68576544-68576563 None:intergenic 10.0%
!! AATATACACAACTTATTTAA+TGG + Chr2:68580047-68580066 None:intergenic 15.0%
!! AATTTGTCTTTATTGTTAAA+TGG - Chr2:68575311-68575330 MsG0280010366.01.T01:intron 15.0%
!! TAAAGATGTTACAAATTATT+TGG - Chr2:68574156-68574175 MsG0280010366.01.T01:intron 15.0%
!! TAATAATGAAGAAAAAATTC+AGG - Chr2:68577459-68577478 MsG0280010366.01.T01:intron 15.0%
!! TATATAAACATTTAATAGGT+AGG - Chr2:68573105-68573124 MsG0280010366.01.T01:CDS 15.0%
!! TTGGTATATAAACATTTAAT+AGG - Chr2:68573101-68573120 MsG0280010366.01.T01:exon 15.0%
!!! AATAAAAACTCAATTTTTTC+TGG - Chr2:68575990-68576009 MsG0280010366.01.T01:intron 15.0%
!!! ATAAAAACTCAATTTTTTCT+GGG - Chr2:68575991-68576010 MsG0280010366.01.T01:intron 15.0%
!!! GATAACTTCTAATTTTTTTT+AGG + Chr2:68573663-68573682 None:intergenic 15.0%
!!! TAATTTTCTTACAAATGTAA+TGG + Chr2:68577775-68577794 None:intergenic 15.0%
!!! TGAGTTTTTATTAATTATTC+TGG + Chr2:68575982-68576001 None:intergenic 15.0%
!!! TTATTTTCTTTTTATAGACA+AGG + Chr2:68579954-68579973 None:intergenic 15.0%
!!! TTTTTATTTTACACTAACAT+TGG - Chr2:68580376-68580395 MsG0280010366.01.T01:intron 15.0%
!! AAAAAAAGTAGCAAATTGAA+GGG - Chr2:68574956-68574975 MsG0280010366.01.T01:intron 20.0%
!! AAAGAAAATAATCTAGTACT+CGG - Chr2:68579963-68579982 MsG0280010366.01.T01:intron 20.0%
!! AATGAAATTAAATCATTTCC+TGG + Chr2:68574463-68574482 None:intergenic 20.0%
!! AGAATTTCTCTTAACTATTA+TGG + Chr2:68573964-68573983 None:intergenic 20.0%
!! AGGAAGATAAAGTAAATTTA+TGG + Chr2:68580099-68580118 None:intergenic 20.0%
!! ATAAATTGTGGTTAATATAG+TGG + Chr2:68575958-68575977 None:intergenic 20.0%
!! ATAATCAAGATATCAATACA+TGG + Chr2:68574297-68574316 None:intergenic 20.0%
!! ATTAACAGATATTTGTTTCA+AGG - Chr2:68578011-68578030 MsG0280010366.01.T01:intron 20.0%
!! ATTTACTTGAATCATATCAA+CGG + Chr2:68575080-68575099 None:intergenic 20.0%
!! CATCAATTAATCATTATACA+TGG + Chr2:68574882-68574901 None:intergenic 20.0%
!! GAAGATAAAGTAAATTTATG+GGG + Chr2:68580097-68580116 None:intergenic 20.0%
!! GCATTAATTGACATAAATTA+AGG - Chr2:68578369-68578388 MsG0280010366.01.T01:CDS 20.0%
!! GGAAGATAAAGTAAATTTAT+GGG + Chr2:68580098-68580117 None:intergenic 20.0%
!! TAAAAAAAGTAGCAAATTGA+AGG - Chr2:68574955-68574974 MsG0280010366.01.T01:intron 20.0%
!! TAAGTTGTGTATATTTAAGT+TGG - Chr2:68580052-68580071 MsG0280010366.01.T01:intron 20.0%
!! TCTATTGTAAAAAAGAAAGT+AGG - Chr2:68574020-68574039 MsG0280010366.01.T01:intron 20.0%
!! TGTATAATGATTAATTGATG+TGG - Chr2:68574882-68574901 MsG0280010366.01.T01:intron 20.0%
!! TGTTGCAGAAAATTATTTAT+TGG - Chr2:68578063-68578082 MsG0280010366.01.T01:intron 20.0%
!! TTATAACAAGAGTTTAGTAA+AGG + Chr2:68574615-68574634 None:intergenic 20.0%
!! TTCATACAATTGCATAAAAA+GGG + Chr2:68580550-68580569 None:intergenic 20.0%
!! TTGATATCTTGATTATTTGA+AGG - Chr2:68574301-68574320 MsG0280010366.01.T01:intron 20.0%
!!! AAGTTGTGTATATTTAAGTT+GGG - Chr2:68580053-68580072 MsG0280010366.01.T01:intron 20.0%
!!! ACATTTAGGTTTCAAATTTT+GGG + Chr2:68574826-68574845 None:intergenic 20.0%
!!! ATGAGAATAGTCAATTTTAA+AGG + Chr2:68575416-68575435 None:intergenic 20.0%
!!! ATTTTGACCAATACATTAAT+GGG - Chr2:68576022-68576041 MsG0280010366.01.T01:intron 20.0%
!!! GTTTGTCATAATTTATTTCT+TGG - Chr2:68577572-68577591 MsG0280010366.01.T01:intron 20.0%
!!! GTTTTTAGAGTTTATTATGA+TGG - Chr2:68578464-68578483 MsG0280010366.01.T01:CDS 20.0%
!!! TAATTTTCTGCAACATAAAT+TGG + Chr2:68578058-68578077 None:intergenic 20.0%
!!! TAGTTAATTTTATTCATAGG+AGG + Chr2:68576541-68576560 None:intergenic 20.0%
!!! TATTTTGACCAATACATTAA+TGG - Chr2:68576021-68576040 MsG0280010366.01.T01:intron 20.0%
!!! TCAATTTTATACATACAACT+AGG - Chr2:68574761-68574780 MsG0280010366.01.T01:intron 20.0%
!!! TGAGAATAGTCAATTTTAAA+GGG + Chr2:68575415-68575434 None:intergenic 20.0%
!!! TTTTTTACTCAAGAATCATT+TGG + Chr2:68574942-68574961 None:intergenic 20.0%
!!! TTTTTTTTTTTGAGAGATAG+TGG + Chr2:68573692-68573711 None:intergenic 20.0%
! AAAAAAGTAGCAAATTGAAG+GGG - Chr2:68574957-68574976 MsG0280010366.01.T01:intron 25.0%
! AAAAAGCTAAAAACAAAACG+AGG + Chr2:68573777-68573796 None:intergenic 25.0%
! AAAAGCTAAAAACAAAACGA+GGG + Chr2:68573776-68573795 None:intergenic 25.0%
! AAAATAACAAAAGATGCATG+AGG - Chr2:68574980-68574999 MsG0280010366.01.T01:intron 25.0%
! AACAATACCCATTAATGTAT+TGG + Chr2:68576032-68576051 None:intergenic 25.0%
! AAGGCAAAAATTATAGAGAA+AGG + Chr2:68578510-68578529 None:intergenic 25.0%
! AATCAGTTTGACTAGATTAT+AGG - Chr2:68573565-68573584 MsG0280010366.01.T01:intron 25.0%
! AATTATTCTGGCATAAATTG+TGG + Chr2:68575970-68575989 None:intergenic 25.0%
! AGCATTATGTGAATTATCAT+TGG + Chr2:68581186-68581205 None:intergenic 25.0%
! AGGCAAAAATTATAGAGAAA+GGG + Chr2:68578509-68578528 None:intergenic 25.0%
! AGTTTCTACTCAATATAATC+AGG + Chr2:68579563-68579582 None:intergenic 25.0%
! ATAAAAAAGCTTTCATCTGT+TGG - Chr2:68578142-68578161 MsG0280010366.01.T01:CDS 25.0%
! ATCGTTGTTATCAAACATAT+GGG + Chr2:68573184-68573203 None:intergenic 25.0%
! ATCTCACTAAAATATGTACA+AGG + Chr2:68578529-68578548 None:intergenic 25.0%
! ATCTTAAAGCTATAATCATG+TGG + Chr2:68574049-68574068 None:intergenic 25.0%
! ATGAAAAAGAAGAAGAATGA+AGG + Chr2:68575846-68575865 None:intergenic 25.0%
! ATGAAGAAGAAAAACAATCT+GGG - Chr2:68576054-68576073 MsG0280010366.01.T01:intron 25.0%
! ATTCTAATCCAAAAATTCAG+AGG - Chr2:68575098-68575117 MsG0280010366.01.T01:intron 25.0%
! CAATTGTATACAAAAGAAGT+GGG + Chr2:68577331-68577350 None:intergenic 25.0%
! GATTATTCATAAATCAGCAT+GGG + Chr2:68574525-68574544 None:intergenic 25.0%
! GTATTGTTCTTACTTATTTC+AGG - Chr2:68576894-68576913 MsG0280010366.01.T01:intron 25.0%
! GTTCATACAATTGCATAAAA+AGG + Chr2:68580551-68580570 None:intergenic 25.0%
! TAAGTTACAAATTGATGAAC+TGG - Chr2:68580488-68580507 MsG0280010366.01.T01:intron 25.0%
! TACATTAATTGTTCTGTCAT+AGG - Chr2:68573238-68573257 MsG0280010366.01.T01:CDS 25.0%
! TAGAGTTTATTATGATGGTA+TGG - Chr2:68578469-68578488 MsG0280010366.01.T01:CDS 25.0%
! TATCGTTGTTATCAAACATA+TGG + Chr2:68573185-68573204 None:intergenic 25.0%
! TATGAAGAAGAAAAACAATC+TGG - Chr2:68576053-68576072 MsG0280010366.01.T01:intron 25.0%
! TATGAATGTTCTCTTTGATA+AGG - Chr2:68580512-68580531 MsG0280010366.01.T01:intron 25.0%
! TATGCTCAAAATTCTATCAT+TGG - Chr2:68577599-68577618 MsG0280010366.01.T01:intron 25.0%
! TCAATTGTATACAAAAGAAG+TGG + Chr2:68577332-68577351 None:intergenic 25.0%
! TCTATAACAAACAACAAAGA+TGG - Chr2:68574695-68574714 MsG0280010366.01.T01:intron 25.0%
! TGATTATTCATAAATCAGCA+TGG + Chr2:68574526-68574545 None:intergenic 25.0%
! TTGTTCCTTCATTAATCAAA+AGG + Chr2:68577279-68577298 None:intergenic 25.0%
!! AAAACTGATTCTTGTTGAAT+TGG - Chr2:68574109-68574128 MsG0280010366.01.T01:intron 25.0%
!! AAATCTGTTTGTCATGTTTT+TGG + Chr2:68580020-68580039 None:intergenic 25.0%
!! AATAAACTCTAAAAACACAC+TGG + Chr2:68578460-68578479 None:intergenic 25.0%
!! AATTCAACAAGAATCAGTTT+TGG + Chr2:68574110-68574129 None:intergenic 25.0%
!! ACATTATGATTTTTGTTCCA+TGG - Chr2:68580974-68580993 MsG0280010366.01.T01:intron 25.0%
!! ACTAAACTCTTGTTATAAGT+AGG - Chr2:68574617-68574636 MsG0280010366.01.T01:intron 25.0%
!! ATAGATTCCTCTATTTTCTA+CGG - Chr2:68576173-68576192 MsG0280010366.01.T01:CDS 25.0%
!! ATATGTTTGATAACAACGAT+AGG - Chr2:68573184-68573203 MsG0280010366.01.T01:CDS 25.0%
!! ATTTTTGTCTGCATGATTAT+AGG - Chr2:68581025-68581044 MsG0280010366.01.T01:intron 25.0%
!! CTTTTGTATACAATTGACAT+GGG - Chr2:68577335-68577354 MsG0280010366.01.T01:CDS 25.0%
!! TATGTTTGATAACAACGATA+GGG - Chr2:68573185-68573204 MsG0280010366.01.T01:CDS 25.0%
!! TCAAGAATACATTTTTGACA+AGG + Chr2:68580119-68580138 None:intergenic 25.0%
!! TCTTGTTATAAGTAGGAATA+AGG - Chr2:68574624-68574643 MsG0280010366.01.T01:intron 25.0%
!! TCTTTTGTATACAATTGACA+TGG - Chr2:68577334-68577353 MsG0280010366.01.T01:CDS 25.0%
!! TTTGAAACCTAAATGTGATT+TGG - Chr2:68574830-68574849 MsG0280010366.01.T01:intron 25.0%
!! TTTTATTCATGCATGTTCTT+TGG - Chr2:68579688-68579707 MsG0280010366.01.T01:intron 25.0%
!!! ACTTTTTCGTACAAAGTTAT+TGG - Chr2:68575373-68575392 MsG0280010366.01.T01:intron 25.0%
!!! CACATTTAGGTTTCAAATTT+TGG + Chr2:68574827-68574846 None:intergenic 25.0%
!!! CATTTAGGTTTCAAATTTTG+GGG + Chr2:68574825-68574844 None:intergenic 25.0%
!!! TAATGGTTATTTTCCTTTTC+TGG - Chr2:68573342-68573361 MsG0280010366.01.T01:intron 25.0%
!!! TGCTTATGTTGATTTGATTT+TGG - Chr2:68580429-68580448 MsG0280010366.01.T01:intron 25.0%
!!! TTTCACCTTTTGATTAATGA+AGG - Chr2:68577271-68577290 MsG0280010366.01.T01:intron 25.0%
!!! TTTTGATTAATGAAGGAACA+AGG - Chr2:68577278-68577297 MsG0280010366.01.T01:intron 25.0%
AAACAGCAGAAAATATCATG+AGG - Chr2:68573029-68573048 MsG0280010366.01.T01:three_prime_UTR 30.0%
AACACGATCAAACTTATATG+TGG - Chr2:68580731-68580750 MsG0280010366.01.T01:intron 30.0%
AACATCACCAAATCACATTT+AGG + Chr2:68574840-68574859 None:intergenic 30.0%
AAGCATGCATGTTTCAAAAT+TGG - Chr2:68577917-68577936 MsG0280010366.01.T01:intron 30.0%
AAGGCTGCAATATATTTCTT+TGG - Chr2:68578388-68578407 MsG0280010366.01.T01:CDS 30.0%
AAGTGCAAAACTCAAAAGTT+TGG + Chr2:68573602-68573621 None:intergenic 30.0%
AATACCAGAAATACCAGAAA+AGG + Chr2:68573358-68573377 None:intergenic 30.0%
AATTCACATAATGCTGAATG+AGG - Chr2:68581191-68581210 MsG0280010366.01.T01:intron 30.0%
ACATTGCAATTGAAGAAATG+GGG - Chr2:68577243-68577262 MsG0280010366.01.T01:intron 30.0%
ACCTTTGACAAATTTGATTG+TGG + Chr2:68579666-68579685 None:intergenic 30.0%
ACTATTCTCATCGAAAACTT+GGG - Chr2:68575425-68575444 MsG0280010366.01.T01:intron 30.0%
ACTATTCTCTAGACAAACAT+TGG - Chr2:68575244-68575263 MsG0280010366.01.T01:intron 30.0%
AGAAGAATGAAGGTTGAATT+TGG + Chr2:68575836-68575855 None:intergenic 30.0%
AGAATAGGTCCAAACTTTAA+AGG + Chr2:68578876-68578895 None:intergenic 30.0%
AGACATTGCAATTGAAGAAA+TGG - Chr2:68577241-68577260 MsG0280010366.01.T01:intron 30.0%
AGTTTATTATGATGGTATGG+AGG - Chr2:68578472-68578491 MsG0280010366.01.T01:CDS 30.0%
ATAACTTTGCTACCAACAAT+AGG - Chr2:68581248-68581267 MsG0280010366.01.T01:intron 30.0%
CACAAAAACTACAGAATTTG+GGG + Chr2:68580702-68580721 None:intergenic 30.0%
CAGAACAATTAATGTAACCA+AGG + Chr2:68573234-68573253 None:intergenic 30.0%
CAGAATAAACAGCCTATAAA+TGG - Chr2:68573537-68573556 MsG0280010366.01.T01:intron 30.0%
CATTTATAGGCTGTTTATTC+TGG + Chr2:68573539-68573558 None:intergenic 30.0%
CTGTCATATTATCAAAGAAG+AGG - Chr2:68577382-68577401 MsG0280010366.01.T01:intron 30.0%
GAATCATCTTGTGTTGTATT+TGG - Chr2:68580328-68580347 MsG0280010366.01.T01:intron 30.0%
GACATTGCAATTGAAGAAAT+GGG - Chr2:68577242-68577261 MsG0280010366.01.T01:intron 30.0%
GAGCTAAATGATACATCTAT+TGG - Chr2:68580289-68580308 MsG0280010366.01.T01:intron 30.0%
GCACAAAAACTACAGAATTT+GGG + Chr2:68580703-68580722 None:intergenic 30.0%
GTAACACAAAAATGTGAAAC+TGG + Chr2:68578727-68578746 None:intergenic 30.0%
GTATTTATCAGTTAATGCAC+TGG - Chr2:68573373-68573392 MsG0280010366.01.T01:intron 30.0%
GTTATTGTAACGATCCAAAA+TGG - Chr2:68574424-68574443 MsG0280010366.01.T01:intron 30.0%
GTTTATTATGATGGTATGGA+GGG - Chr2:68578473-68578492 MsG0280010366.01.T01:CDS 30.0%
TAAAGGTAACATAGATGCAT+TGG + Chr2:68574598-68574617 None:intergenic 30.0%
TACAAAACCGTAATTTCAAG+TGG + Chr2:68573300-68573319 None:intergenic 30.0%
TACACTAATAGTAGTTCAAG+TGG + Chr2:68576877-68576896 None:intergenic 30.0%
TACATATACCCCTCTTATTA+AGG + Chr2:68581219-68581238 None:intergenic 30.0%
TATTCATAGGAGGTGAAAAA+GGG + Chr2:68576531-68576550 None:intergenic 30.0%
TCAGTAGTAGTATGAGATTT+CGG - Chr2:68579086-68579105 MsG0280010366.01.T01:intron 30.0%
TGAACATCAATGTACAGAAA+AGG + Chr2:68577989-68578008 None:intergenic 30.0%
TGATTCTTGTTGAATTGGTT+TGG - Chr2:68574114-68574133 MsG0280010366.01.T01:intron 30.0%
TGCACAAAAACTACAGAATT+TGG + Chr2:68580704-68580723 None:intergenic 30.0%
TGCATAAAGTAAGTACTTCA+GGG + Chr2:68578678-68578697 None:intergenic 30.0%
TGTTTCATCTGATGTATTGT+TGG - Chr2:68579758-68579777 MsG0280010366.01.T01:intron 30.0%
TTAAAGCTATAATCATGTGG+TGG + Chr2:68574046-68574065 None:intergenic 30.0%
TTAGAAATGAAGGATAAGCT+TGG - Chr2:68581107-68581126 MsG0280010366.01.T01:intron 30.0%
TTAGAAGCTAGATATCGAAA+GGG + Chr2:68579144-68579163 None:intergenic 30.0%
TTATTCATAGGAGGTGAAAA+AGG + Chr2:68576532-68576551 None:intergenic 30.0%
TTGCACAACTTTCAATTAAG+CGG + Chr2:68577102-68577121 None:intergenic 30.0%
TTGTTCTTACTTATTTCAGG+TGG - Chr2:68576897-68576916 MsG0280010366.01.T01:intron 30.0%
! AGATATTCAAAATGGCTTGT+TGG - Chr2:68579512-68579531 MsG0280010366.01.T01:intron 30.0%
! ATATGACACCTCTGAATTTT+TGG + Chr2:68575109-68575128 None:intergenic 30.0%
! ATTATTCTTTTCCAAACCGA+AGG + Chr2:68578286-68578305 None:intergenic 30.0%
! ATTCGATTTTACACAGAACT+GGG - Chr2:68578923-68578942 MsG0280010366.01.T01:intron 30.0%
! CGTTTTCTGTAATGTAGAAA+TGG + Chr2:68575703-68575722 None:intergenic 30.0%
! CTTGAGTTGTTTGATAAAGT+GGG - Chr2:68577144-68577163 MsG0280010366.01.T01:intron 30.0%
! GAATCGTAACATTTTTGTGA+AGG + Chr2:68581140-68581159 None:intergenic 30.0%
! GTATTTGGAATAAGCGTTTA+AGG - Chr2:68580343-68580362 MsG0280010366.01.T01:intron 30.0%
! TATCTTCTTGTTGTAACCTT+CGG - Chr2:68578267-68578286 MsG0280010366.01.T01:intron 30.0%
! TCTTTTTATAGACAAGGTTC+TGG + Chr2:68579948-68579967 None:intergenic 30.0%
! TTTTGTGATCCTACATCAAT+TGG - Chr2:68580603-68580622 MsG0280010366.01.T01:intron 30.0%
!! AAGCCATTTTGAATATCTTG+CGG + Chr2:68579510-68579529 None:intergenic 30.0%
!! CTGTTTCTGTAATGTAGAAA+TGG + Chr2:68573015-68573034 None:intergenic 30.0%
!! GAATAGTCAATTTTAAAGGG+TGG + Chr2:68575412-68575431 None:intergenic 30.0%
!! GTAGAGTATTTTAAGTAGCT+TGG - Chr2:68579113-68579132 MsG0280010366.01.T01:intron 30.0%
!! TCGTAGAAATTGTTGTTTGT+GGG + Chr2:68581297-68581316 None:intergenic 30.0%
!! TTCGTAGAAATTGTTGTTTG+TGG + Chr2:68581298-68581317 None:intergenic 30.0%
!! TTTTCCTTTTCTGGTATTTC+TGG - Chr2:68573351-68573370 MsG0280010366.01.T01:intron 30.0%
!!! AATTTTGAAACATGCATGCT+TGG + Chr2:68577918-68577937 None:intergenic 30.0%
!!! CTAACTTTTGGAATTGAGTT+AGG - Chr2:68580672-68580691 MsG0280010366.01.T01:intron 30.0%
!!! GGAGTTGTTTTTAGAAATGA+AGG - Chr2:68581097-68581116 MsG0280010366.01.T01:intron 30.0%
!!! TATTGCTATTTGCGATTTTC+TGG - Chr2:68573867-68573886 MsG0280010366.01.T01:intron 30.0%
!!! TGTATGTGTCTGTTTTGATT+AGG - Chr2:68576224-68576243 MsG0280010366.01.T01:CDS 30.0%
!!! TGTCTGTTTTGATTAGGATA+TGG - Chr2:68576230-68576249 MsG0280010366.01.T01:intron 30.0%
AAAATCACCGTAAACCTAAC+TGG - Chr2:68575209-68575228 MsG0280010366.01.T01:intron 35.0%
AAACACACCGTAGAAAATAG+AGG + Chr2:68576183-68576202 None:intergenic 35.0%
AAAGAACTGCGTCTATCAAA+AGG + Chr2:68579413-68579432 None:intergenic 35.0%
AAATCACCGTAAACCTAACT+GGG - Chr2:68575210-68575229 MsG0280010366.01.T01:intron 35.0%
AAATCATTTCCTGGTTGTTG+TGG + Chr2:68574454-68574473 None:intergenic 35.0%
AAATTTGCATGGGTAAAGCT+AGG - Chr2:68577205-68577224 MsG0280010366.01.T01:intron 35.0%
AACATTGCTGAGTTACTCTA+AGG + Chr2:68576673-68576692 None:intergenic 35.0%
AACTGGGATGTACCTAAAAA+TGG - Chr2:68578939-68578958 MsG0280010366.01.T01:intron 35.0%
AAGAGTCAGAAACCAATCAT+CGG - Chr2:68581063-68581082 MsG0280010366.01.T01:intron 35.0%
AATGAGGCTCCTTAATAAGA+GGG - Chr2:68581207-68581226 MsG0280010366.01.T01:intron 35.0%
AATTGTTAGCGTCATGTTAG+TGG - Chr2:68576615-68576634 MsG0280010366.01.T01:intron 35.0%
AATTTGCATGGGTAAAGCTA+GGG - Chr2:68577206-68577225 MsG0280010366.01.T01:intron 35.0%
ACAGAACAGTGACTTTGTTA+TGG + Chr2:68580172-68580191 None:intergenic 35.0%
ACATTGCTGAGTTACTCTAA+GGG + Chr2:68576672-68576691 None:intergenic 35.0%
ACTCAGGGTTATTTGAGAAT+AGG + Chr2:68578891-68578910 None:intergenic 35.0%
ACTGGGATGTACCTAAAAAT+GGG - Chr2:68578940-68578959 MsG0280010366.01.T01:intron 35.0%
AGAATGAAGGTTGAATTTGG+TGG + Chr2:68575833-68575852 None:intergenic 35.0%
AGTAGTATGAGATTTCGGTT+AGG - Chr2:68579091-68579110 MsG0280010366.01.T01:intron 35.0%
AGTCAGCATTCCAGATTTAT+CGG - Chr2:68578607-68578626 MsG0280010366.01.T01:intron 35.0%
ATCTGAATGCTATGCATCAT+AGG - Chr2:68580216-68580235 MsG0280010366.01.T01:intron 35.0%
ATTACCAATAACATAAGCGC+AGG - Chr2:68578849-68578868 MsG0280010366.01.T01:intron 35.0%
ATTCATAGGAGGTGAAAAAG+GGG + Chr2:68576530-68576549 None:intergenic 35.0%
ATTCCAAAAGTTAGCTCAAG+AGG + Chr2:68580666-68580685 None:intergenic 35.0%
ATTTGCAGCATCAACTTTCT+CGG + Chr2:68576946-68576965 None:intergenic 35.0%
CAGAGTAATATATCATGCGA+AGG - Chr2:68577011-68577030 MsG0280010366.01.T01:intron 35.0%
CATAGTTCCATGTGAACATT+TGG - Chr2:68579640-68579659 MsG0280010366.01.T01:intron 35.0%
CCACTTTATCAAACAACTCA+AGG + Chr2:68577146-68577165 None:intergenic 35.0%
CTATTCTCATCGAAAACTTG+GGG - Chr2:68575426-68575445 MsG0280010366.01.T01:intron 35.0%
CTGCATAAAGTAAGTACTTC+AGG + Chr2:68578679-68578698 None:intergenic 35.0%
CTTAGAAGCTAGATATCGAA+AGG + Chr2:68579145-68579164 None:intergenic 35.0%
GAAACTGGTGATATAGTTCT+AGG + Chr2:68578712-68578731 None:intergenic 35.0%
GAAAGTTGTGCAAAGATACT+AGG - Chr2:68577109-68577128 MsG0280010366.01.T01:intron 35.0%
GAACTTGCGAGTATATGTTA+CGG + Chr2:68577632-68577651 None:intergenic 35.0%
GACATACTTCCAATTGATGT+AGG + Chr2:68580615-68580634 None:intergenic 35.0%
GACTATTCTCATCGAAAACT+TGG - Chr2:68575424-68575443 MsG0280010366.01.T01:intron 35.0%
GATTTCCTTACCGATAAATC+TGG + Chr2:68578620-68578639 None:intergenic 35.0%
GCCACAATCAAATTTGTCAA+AGG - Chr2:68579662-68579681 MsG0280010366.01.T01:intron 35.0%
GTATACAATTGACATGGGTA+TGG - Chr2:68577340-68577359 MsG0280010366.01.T01:CDS 35.0%
GTTACTATGAAATGATGCTG+TGG - Chr2:68577428-68577447 MsG0280010366.01.T01:intron 35.0%
GTTAGATCCTTCATTATACG+TGG + Chr2:68574920-68574939 None:intergenic 35.0%
TAAGAAACCTAGAGCAGAAT+TGG - Chr2:68579477-68579496 MsG0280010366.01.T01:intron 35.0%
TACATAGTGTTGTCACATAG+AGG - Chr2:68576762-68576781 MsG0280010366.01.T01:intron 35.0%
TAGAAGCTAGATATCGAAAG+GGG + Chr2:68579143-68579162 None:intergenic 35.0%
TAGCCGCAAGATATTCAAAA+TGG - Chr2:68579504-68579523 MsG0280010366.01.T01:intron 35.0%
TCGCATGATATATTACTCTG+AGG + Chr2:68577011-68577030 None:intergenic 35.0%
TCTCATACTACTACTGATGT+AGG + Chr2:68579083-68579102 None:intergenic 35.0%
TGAACTTGTGACAAGTAGAT+GGG - Chr2:68575507-68575526 MsG0280010366.01.T01:intron 35.0%
TGATACAGTGTTGTCAATTG+TGG + Chr2:68580933-68580952 None:intergenic 35.0%
TGATGGGACTTAAGTACTAT+GGG - Chr2:68579047-68579066 MsG0280010366.01.T01:intron 35.0%
TGCAAAACTCAAAAGTTTGG+TGG + Chr2:68573599-68573618 None:intergenic 35.0%
TTATCATTGGCATTTGCAGA+AGG + Chr2:68581173-68581192 None:intergenic 35.0%
TTATGACCCAGTTAGGTTTA+CGG + Chr2:68575219-68575238 None:intergenic 35.0%
TTCAATGTTGACAAGAAGCA+TGG - Chr2:68580577-68580596 MsG0280010366.01.T01:intron 35.0%
TTGAACTTGTGACAAGTAGA+TGG - Chr2:68575506-68575525 MsG0280010366.01.T01:intron 35.0%
TTGATGGGACTTAAGTACTA+TGG - Chr2:68579046-68579065 MsG0280010366.01.T01:intron 35.0%
TTGCCTAATCCTTAAAAGAC+TGG + Chr2:68580637-68580656 None:intergenic 35.0%
TTTCAATTAAGCGGCGAAAA+CGG + Chr2:68577093-68577112 None:intergenic 35.0%
! AACAGTGACTTTGTTATGGA+AGG + Chr2:68580168-68580187 None:intergenic 35.0%
! AACTCGAGTTCTTTTTCTAG+AGG - Chr2:68578977-68578996 MsG0280010366.01.T01:intron 35.0%
! ACACTCTTTGATGCTTTGTT+CGG + Chr2:68579209-68579228 None:intergenic 35.0%
! ACAGTGACTTTGTTATGGAA+GGG + Chr2:68580167-68580186 None:intergenic 35.0%
! ACTGATTCATCGCCATTTAT+AGG + Chr2:68573552-68573571 None:intergenic 35.0%
! ATATCTAGCTTCTAAGAGAG+TGG - Chr2:68579149-68579168 MsG0280010366.01.T01:intron 35.0%
! ATGATAGGGACTGGATATTT+TGG - Chr2:68579262-68579281 MsG0280010366.01.T01:intron 35.0%
! CATCAAGACTTTCTCTTTTC+AGG - Chr2:68573072-68573091 MsG0280010366.01.T01:three_prime_UTR 35.0%
! CATTCGATTTTACACAGAAC+TGG - Chr2:68578922-68578941 MsG0280010366.01.T01:intron 35.0%
! CCTTGAGTTGTTTGATAAAG+TGG - Chr2:68577143-68577162 MsG0280010366.01.T01:intron 35.0%
! CTTTTAGACTTCAAAGCAAG+TGG - Chr2:68578229-68578248 MsG0280010366.01.T01:intron 35.0%
! GAAGTATGTCCAGTCTTTTA+AGG - Chr2:68580625-68580644 MsG0280010366.01.T01:intron 35.0%
! GCATTGGTAGAAATTTGCAT+GGG - Chr2:68577195-68577214 MsG0280010366.01.T01:intron 35.0%
! GGGAGGCATAAATAAATTCA+AGG - Chr2:68579797-68579816 MsG0280010366.01.T01:intron 35.0%
! TAACATAGATGCATTGGTCA+TGG + Chr2:68574592-68574611 None:intergenic 35.0%
! TACAATAACTCTTTCTAGCG+TGG + Chr2:68574413-68574432 None:intergenic 35.0%
! TATCTAGCTTCTAAGAGAGT+GGG - Chr2:68579150-68579169 MsG0280010366.01.T01:intron 35.0%
! TATTTTGTCCGTGTTTTGTG+TGG - Chr2:68577712-68577731 MsG0280010366.01.T01:intron 35.0%
! TCTGTTTCTTGTTGTCTGAA+AGG - Chr2:68576570-68576589 MsG0280010366.01.T01:intron 35.0%
! TGAACGGAAGGAGAATATTT+TGG - Chr2:68578099-68578118 MsG0280010366.01.T01:intron 35.0%
! TGATAGGGACTGGATATTTT+GGG - Chr2:68579263-68579282 MsG0280010366.01.T01:intron 35.0%
! TGCATTGGTAGAAATTTGCA+TGG - Chr2:68577194-68577213 MsG0280010366.01.T01:intron 35.0%
! TGTATTGTTGGTGTTCTTGA+AGG - Chr2:68579770-68579789 MsG0280010366.01.T01:intron 35.0%
!! ATATTACTCTGAGGTACGTT+TGG + Chr2:68577002-68577021 None:intergenic 35.0%
!! CACTTGCTTTGAAGTCTAAA+AGG + Chr2:68578231-68578250 None:intergenic 35.0%
!! CATCGACTTATCAATCTTCT+GGG + Chr2:68575032-68575051 None:intergenic 35.0%
!! CTTTTAAGGACAGTTCCTAA+GGG - Chr2:68579366-68579385 MsG0280010366.01.T01:intron 35.0%
!! GCTTTAAGATGAGCATGATT+AGG - Chr2:68574059-68574078 MsG0280010366.01.T01:intron 35.0%
!! GTTTTGGTGGAAAGTTTAAG+TGG - Chr2:68579317-68579336 MsG0280010366.01.T01:intron 35.0%
!! TCATCGACTTATCAATCTTC+TGG + Chr2:68575033-68575052 None:intergenic 35.0%
!! TCTATAGCGAAGGTATTTCA+GGG - Chr2:68578166-68578185 MsG0280010366.01.T01:intron 35.0%
!! TCTTGAGTTTCTGTTTTGAG+AGG - Chr2:68573928-68573947 MsG0280010366.01.T01:intron 35.0%
!! TGTCCAGTCTTTTAAGGATT+AGG - Chr2:68580631-68580650 MsG0280010366.01.T01:intron 35.0%
!! TGTTGAATTGGTTTGGTGTT+AGG - Chr2:68574121-68574140 MsG0280010366.01.T01:intron 35.0%
!! TTCTTGAAGTCCCCATTTTT+AGG + Chr2:68578954-68578973 None:intergenic 35.0%
!! TTGATTTGTGTAAGCTTCTC+AGG - Chr2:68580464-68580483 MsG0280010366.01.T01:intron 35.0%
!!! ACACTTTTGATTTACGAGGT+GGG - Chr2:68577518-68577537 MsG0280010366.01.T01:intron 35.0%
AAACTTGGGGACAAGTAAGA+TGG - Chr2:68575439-68575458 MsG0280010366.01.T01:intron 40.0%
AACTTGGGGACAAGTAAGAT+GGG - Chr2:68575440-68575459 MsG0280010366.01.T01:intron 40.0%
AAGCTGCTGTGTGAAAACAT+TGG + Chr2:68580766-68580785 None:intergenic 40.0%
AATGAGCTTCTCATATGACG+AGG + Chr2:68579861-68579880 None:intergenic 40.0%
ACAAGTCAACTTGTATGCCA+TGG + Chr2:68580994-68581013 None:intergenic 40.0%
ACTACTACTGATGTAGGACT+TGG + Chr2:68579077-68579096 None:intergenic 40.0%
AGCGTGCATTTATAGAGAGA+AGG - Chr2:68575274-68575293 MsG0280010366.01.T01:intron 40.0%
AGTCTCATGTCAAGTAGCAT+AGG - Chr2:68579293-68579312 MsG0280010366.01.T01:intron 40.0%
ATGAGGCTCCTTAATAAGAG+GGG - Chr2:68581208-68581227 MsG0280010366.01.T01:intron 40.0%
ATGGGACTTAAGTACTATGG+GGG - Chr2:68579049-68579068 MsG0280010366.01.T01:intron 40.0%
ATTGTGGCCAAATGTTCACA+TGG + Chr2:68579650-68579669 None:intergenic 40.0%
CAATGTTGTCAATAGATCGC+GGG + Chr2:68576842-68576861 None:intergenic 40.0%
CAATTGATCGAACTCTCCAT+CGG + Chr2:68580254-68580273 None:intergenic 40.0%
CAGAAACTATATCATGCACG+AGG + Chr2:68578642-68578661 None:intergenic 40.0%
CCAATGTTGTCAATAGATCG+CGG + Chr2:68576843-68576862 None:intergenic 40.0%
CCAATTAGCCACACAAAACA+CGG + Chr2:68577723-68577742 None:intergenic 40.0%
CCTTAAAAGCTAGCTATCGA+GGG + Chr2:68579355-68579374 None:intergenic 40.0%
CGTGAAAGGATACAATGCAT+TGG - Chr2:68577179-68577198 MsG0280010366.01.T01:intron 40.0%
CTATAGTAGTGCTTTAGTGC+TGG - Chr2:68580869-68580888 MsG0280010366.01.T01:intron 40.0%
CTGAATCAGAGTTTCGATGA+AGG + Chr2:68575926-68575945 None:intergenic 40.0%
CTGGGATGTACCTAAAAATG+GGG - Chr2:68578941-68578960 MsG0280010366.01.T01:intron 40.0%
CTGGGTTATCACACTATGAT+CGG - Chr2:68573467-68573486 MsG0280010366.01.T01:intron 40.0%
CTTAAAAGCTAGCTATCGAG+GGG + Chr2:68579354-68579373 None:intergenic 40.0%
CTTCATCGAAACTCTGATTC+AGG - Chr2:68575924-68575943 MsG0280010366.01.T01:intron 40.0%
GAATGAGGCTCCTTAATAAG+AGG - Chr2:68581206-68581225 MsG0280010366.01.T01:intron 40.0%
GACTGTGTAACTAGCAATGA+AGG + Chr2:68578591-68578610 None:intergenic 40.0%
GAGAAGTCACTACAATGGTA+AGG - Chr2:68575051-68575070 MsG0280010366.01.T01:intron 40.0%
GATGGGACTTAAGTACTATG+GGG - Chr2:68579048-68579067 MsG0280010366.01.T01:intron 40.0%
GCATTCCAGATTTATCGGTA+AGG - Chr2:68578612-68578631 MsG0280010366.01.T01:intron 40.0%
GTATCACTTATGACCCAGTT+AGG + Chr2:68575226-68575245 None:intergenic 40.0%
GTGGGTAGTCATCATTTGAT+GGG - Chr2:68579031-68579050 MsG0280010366.01.T01:intron 40.0%
GTGTTGTCAATTGTGGAATG+CGG + Chr2:68580926-68580945 None:intergenic 40.0%
GTTGCTTCCACGTATAATGA+AGG - Chr2:68574910-68574929 MsG0280010366.01.T01:intron 40.0%
TAGCGTCATGTTAGTGGTTA+GGG - Chr2:68576621-68576640 MsG0280010366.01.T01:intron 40.0%
TATGATGGTATGGAGGGATT+AGG - Chr2:68578479-68578498 MsG0280010366.01.T01:CDS 40.0%
TCAAATGATGACTACCCACA+TGG + Chr2:68579030-68579049 None:intergenic 40.0%
TCATCTCATCACTCGCAAAT+TGG - Chr2:68575664-68575683 MsG0280010366.01.T01:intron 40.0%
TCCTTAAAAGCTAGCTATCG+AGG + Chr2:68579356-68579375 None:intergenic 40.0%
TCGATGAGAAGTCACTACAA+TGG - Chr2:68575046-68575065 MsG0280010366.01.T01:intron 40.0%
TCTCCTTCATCGTAACCTAA+CGG - Chr2:68573737-68573756 MsG0280010366.01.T01:CDS 40.0%
TCTTCTCCCTGCATATTTCA+CGG - Chr2:68574791-68574810 MsG0280010366.01.T01:intron 40.0%
TGATAAGTATCCAAGCCCTT+AGG + Chr2:68579384-68579403 None:intergenic 40.0%
TGCAAAGATACTAGGAACTG+AGG - Chr2:68577117-68577136 MsG0280010366.01.T01:intron 40.0%
TGCAGATGAATTGTCTGAAG+CGG - Chr2:68576144-68576163 MsG0280010366.01.T01:CDS 40.0%
TGTGGGTAGTCATCATTTGA+TGG - Chr2:68579030-68579049 MsG0280010366.01.T01:intron 40.0%
TGTTATGGAAGGGTTCTTTG+AGG + Chr2:68580157-68580176 None:intergenic 40.0%
TTAAAAGCTAGCTATCGAGG+GGG + Chr2:68579353-68579372 None:intergenic 40.0%
TTAGCGTCATGTTAGTGGTT+AGG - Chr2:68576620-68576639 MsG0280010366.01.T01:intron 40.0%
TTCATAGGAGGTGAAAAAGG+GGG + Chr2:68576529-68576548 None:intergenic 40.0%
TTCTCATATGACGAGGAAGA+AGG + Chr2:68579854-68579873 None:intergenic 40.0%
! ACCGTAATTTCAAGTGGCAT+AGG + Chr2:68573294-68573313 None:intergenic 40.0%
! ATGCTACTTGACATGAGACT+TGG + Chr2:68579293-68579312 None:intergenic 40.0%
! CACTAAAGCACTACTATAGC+TGG + Chr2:68580868-68580887 None:intergenic 40.0%
! CCCTATGCCACTTGAAATTA+CGG - Chr2:68573290-68573309 MsG0280010366.01.T01:intron 40.0%
! CCGTAATTTCAAGTGGCATA+GGG + Chr2:68573293-68573312 None:intergenic 40.0%
! GATAGGGACTGGATATTTTG+GGG - Chr2:68579264-68579283 MsG0280010366.01.T01:intron 40.0%
! GTCAAGTAGCATAGGAGTTT+TGG - Chr2:68579301-68579320 MsG0280010366.01.T01:intron 40.0%
! GTGCTGGTGTACATACAAAT+TGG - Chr2:68581270-68581289 MsG0280010366.01.T01:intron 40.0%
! TCAATTGCTTCTGCTACTTG+AGG - Chr2:68580267-68580286 MsG0280010366.01.T01:intron 40.0%
! TCACCTCTTGAGCTAACTTT+TGG - Chr2:68580660-68580679 MsG0280010366.01.T01:intron 40.0%
! TCTTGTTGTAACCTTCGGTT+TGG - Chr2:68578272-68578291 MsG0280010366.01.T01:intron 40.0%
! TGAAGGATAAGCTTGGTCTT+TGG - Chr2:68581114-68581133 MsG0280010366.01.T01:intron 40.0%
! TTGGTGTTCTTGAAGGTTGA+GGG - Chr2:68579777-68579796 MsG0280010366.01.T01:intron 40.0%
!! AAGTAGCATAGGAGTTTTGG+TGG - Chr2:68579304-68579323 MsG0280010366.01.T01:intron 40.0%
!! ACAAGGTTCTGGAAGTAACT+TGG + Chr2:68579937-68579956 None:intergenic 40.0%
!! ACGGAAGGAGAATATTTTGG+AGG - Chr2:68578102-68578121 MsG0280010366.01.T01:intron 40.0%
!! CAAGACTTTCTCTTTTCAGG+CGG - Chr2:68573075-68573094 MsG0280010366.01.T01:three_prime_UTR 40.0%
!! CTCTATAGCGAAGGTATTTC+AGG - Chr2:68578165-68578184 MsG0280010366.01.T01:intron 40.0%
!! GCTTTTAAGGACAGTTCCTA+AGG - Chr2:68579365-68579384 MsG0280010366.01.T01:intron 40.0%
!! GGAGAATATTTTGGAGGTGT+TGG - Chr2:68578108-68578127 MsG0280010366.01.T01:intron 40.0%
!! TGTAGCAGTGTCACTTCTAA+TGG - Chr2:68576297-68576316 MsG0280010366.01.T01:intron 40.0%
!! TTTGGAGGTGTTGGAAATCA+TGG - Chr2:68578117-68578136 MsG0280010366.01.T01:intron 40.0%
!!! GACACTTTTGATTTACGAGG+TGG - Chr2:68577517-68577536 MsG0280010366.01.T01:intron 40.0%
!!! GACGACACTTTTGATTTACG+AGG - Chr2:68577514-68577533 MsG0280010366.01.T01:intron 40.0%
!!! GAGTTTCTGTTTTGAGAGGA+TGG - Chr2:68573932-68573951 MsG0280010366.01.T01:intron 40.0%
!!! GTTTCAAATTTTGGGGCATG+TGG + Chr2:68574818-68574837 None:intergenic 40.0%
AAATTGGTGCATCCACTGTC+TGG - Chr2:68577933-68577952 MsG0280010366.01.T01:intron 45.0%
AATAACCCTGAGTCTGCAGT+AGG - Chr2:68578898-68578917 MsG0280010366.01.T01:intron 45.0%
AATAGGTAGGCATGAAGCGA+AGG - Chr2:68573118-68573137 MsG0280010366.01.T01:CDS 45.0%
AATGTCCTACTGCAGACTCA+GGG + Chr2:68578906-68578925 None:intergenic 45.0%
ACAACACAAAAGCTCTCCGT+AGG - Chr2:68573263-68573282 MsG0280010366.01.T01:intron 45.0%
ACCCAGTCTTGCAGTTGAAT+TGG + Chr2:68577410-68577429 None:intergenic 45.0%
ACGTAACTGTGCATTGCTCA+AGG - Chr2:68579883-68579902 MsG0280010366.01.T01:intron 45.0%
ACTATTGGAACCTGTTGCAG+AGG - Chr2:68578201-68578220 MsG0280010366.01.T01:intron 45.0%
AGGACCTGCGCTTATGTTAT+TGG + Chr2:68578856-68578875 None:intergenic 45.0%
AGTGGTTAGGGTTTGAACCT+TGG - Chr2:68576633-68576652 MsG0280010366.01.T01:intron 45.0%
ATCCAAACACTTAGTCGGTC+CGG + Chr2:68573428-68573447 None:intergenic 45.0%
ATGACTACCCACATGGTGTT+GGG + Chr2:68579023-68579042 None:intergenic 45.0%
ATGTGGACCGTGAAATATGC+AGG + Chr2:68574801-68574820 None:intergenic 45.0%
CAATCATCGGCAAACTTGCA+TGG - Chr2:68581076-68581095 MsG0280010366.01.T01:intron 45.0%
CAGAAAAGGCAGCATCATGT+AGG + Chr2:68577975-68577994 None:intergenic 45.0%
CATGCAAGTTTGCCGATGAT+TGG + Chr2:68581078-68581097 None:intergenic 45.0%
CATTTCCTGGTTGTTGTGGA+TGG + Chr2:68574450-68574469 None:intergenic 45.0%
CCAAACACACGATTAGTGAC+AGG + Chr2:68579721-68579740 None:intergenic 45.0%
CCCAATTCAACTGCAAGACT+GGG - Chr2:68577406-68577425 MsG0280010366.01.T01:intron 45.0%
CCCAGTCTTGCAGTTGAATT+GGG + Chr2:68577409-68577428 None:intergenic 45.0%
CCGCGATCTATTGACAACAT+TGG - Chr2:68576840-68576859 MsG0280010366.01.T01:intron 45.0%
CCTGTCACTAATCGTGTGTT+TGG - Chr2:68579718-68579737 MsG0280010366.01.T01:intron 45.0%
CTATCCACCAATTCTGCTCT+AGG + Chr2:68579487-68579506 None:intergenic 45.0%
CTCCTTCATCGTAACCTAAC+GGG - Chr2:68573738-68573757 MsG0280010366.01.T01:CDS 45.0%
GAAACCTAGAGCAGAATTGG+TGG - Chr2:68579480-68579499 MsG0280010366.01.T01:intron 45.0%
GATAAAGTGGGACGAAAACC+AGG - Chr2:68577156-68577175 MsG0280010366.01.T01:intron 45.0%
GCATCAACTTTCTCGGTATC+AGG + Chr2:68576939-68576958 None:intergenic 45.0%
GGTGGAAAGTTTAAGTGGCT+TGG - Chr2:68579322-68579341 MsG0280010366.01.T01:intron 45.0%
TAGAAGTGACACTGCTACAG+AGG + Chr2:68576296-68576315 None:intergenic 45.0%
TATGTCTCCAAACCAGACAG+TGG + Chr2:68577948-68577967 None:intergenic 45.0%
TCAGAGTTTCGATGAAGGTG+AGG + Chr2:68575921-68575940 None:intergenic 45.0%
TCCCAATTCAACTGCAAGAC+TGG - Chr2:68577405-68577424 MsG0280010366.01.T01:intron 45.0%
TCCTTCATCGTAACCTAACG+GGG - Chr2:68573739-68573758 MsG0280010366.01.T01:CDS 45.0%
TCGGGATCCAAACACTTAGT+CGG + Chr2:68573433-68573452 None:intergenic 45.0%
TCTTTGTGAGAGTGAACGGA+AGG - Chr2:68578087-68578106 MsG0280010366.01.T01:intron 45.0%
TGGCTCTTTGTGAGAGTGAA+CGG - Chr2:68578083-68578102 MsG0280010366.01.T01:intron 45.0%
TGTACACCAGCACCTATTGT+TGG + Chr2:68581263-68581282 None:intergenic 45.0%
TGTGGACCGTGAAATATGCA+GGG + Chr2:68574800-68574819 None:intergenic 45.0%
TTGCTACCAACAATAGGTGC+TGG - Chr2:68581254-68581273 MsG0280010366.01.T01:intron 45.0%
! AGCTTCTAAGAGAGTGGGAA+AGG - Chr2:68579155-68579174 MsG0280010366.01.T01:intron 45.0%
! ATCAAAGAGTGTAGCTTCCG+GGG - Chr2:68579217-68579236 MsG0280010366.01.T01:intron 45.0%
! CATCAAAGAGTGTAGCTTCC+GGG - Chr2:68579216-68579235 MsG0280010366.01.T01:intron 45.0%
! CCGTGTTTTGTGTGGCTAAT+TGG - Chr2:68577720-68577739 MsG0280010366.01.T01:intron 45.0%
! GCATCAAAGAGTGTAGCTTC+CGG - Chr2:68579215-68579234 MsG0280010366.01.T01:intron 45.0%
! GCTTCTAAGAGAGTGGGAAA+GGG - Chr2:68579156-68579175 MsG0280010366.01.T01:intron 45.0%
! GTTGGTGTTCTTGAAGGTTG+AGG - Chr2:68579776-68579795 MsG0280010366.01.T01:intron 45.0%
! GTTGTTGTGGATGGCCATTT+TGG + Chr2:68574441-68574460 None:intergenic 45.0%
! TGCTGAGTTACTCTAAGGGT+TGG + Chr2:68576668-68576687 None:intergenic 45.0%
! TGGTGGTGAATGTGTACGAA+GGG + Chr2:68575816-68575835 None:intergenic 45.0%
!! AGCGCAGGTCCTTTAAAGTT+TGG - Chr2:68578864-68578883 MsG0280010366.01.T01:intron 45.0%
!! ATCTGTTGGCTCTATAGCGA+AGG - Chr2:68578156-68578175 MsG0280010366.01.T01:intron 45.0%
!! TTGGTGGTGAATGTGTACGA+AGG + Chr2:68575817-68575836 None:intergenic 45.0%
!!! CCCTCGATAGCTAGCTTTTA+AGG - Chr2:68579352-68579371 MsG0280010366.01.T01:intron 45.0%
!! ATTAATCAAAATAATAAATT+AGG - Chr2:68575600-68575619 MsG0280010366.01.T01:intron 5.0%
AAAAGGAGCTCCTCTGCAAC+AGG + Chr2:68578214-68578233 None:intergenic 50.0%
AAGGACAGTTCCTAAGGGCT+TGG - Chr2:68579371-68579390 MsG0280010366.01.T01:intron 50.0%
AATGGCCATCCACAACAACC+AGG - Chr2:68574442-68574461 MsG0280010366.01.T01:intron 50.0%
ACCCCGTTAGGTTACGATGA+AGG + Chr2:68573743-68573762 None:intergenic 50.0%
AGGGTTGGAAATCAGCTCCA+AGG + Chr2:68576653-68576672 None:intergenic 50.0%
AGTGGCATAGGGCAAACCTA+CGG + Chr2:68573282-68573301 None:intergenic 50.0%
CAACTCTCCCAACACCATGT+GGG - Chr2:68579013-68579032 MsG0280010366.01.T01:intron 50.0%
CCAGACCAACTGGTTGAATC+GGG + Chr2:68573451-68573470 None:intergenic 50.0%
CCCAGACCAACTGGTTGAAT+CGG + Chr2:68573452-68573471 None:intergenic 50.0%
CTGGCTCATGAGATCATGCT+CGG - Chr2:68573886-68573905 MsG0280010366.01.T01:intron 50.0%
GAATGTCCTACTGCAGACTC+AGG + Chr2:68578907-68578926 None:intergenic 50.0%
GATGACTACCCACATGGTGT+TGG + Chr2:68579024-68579043 None:intergenic 50.0%
GCATTGTATCCTTTCACGCC+TGG + Chr2:68577177-68577196 None:intergenic 50.0%
GGAAAAACGACAACCCCGTT+AGG + Chr2:68573755-68573774 None:intergenic 50.0%
GGGCATGGGAAGACTACTAT+TGG - Chr2:68578186-68578205 MsG0280010366.01.T01:intron 50.0%
GGGCGATATGTTTGCTCTTC+TGG + Chr2:68577311-68577330 None:intergenic 50.0%
GGTGGTGAATGTGTACGAAG+GGG + Chr2:68575815-68575834 None:intergenic 50.0%
GTAACCAAGGAACACGACTC+TGG + Chr2:68573221-68573240 None:intergenic 50.0%
GTGTGATAACCCAGACCAAC+TGG + Chr2:68573461-68573480 None:intergenic 50.0%
GTGTTCTTGAAGGTTGAGGG+AGG - Chr2:68579780-68579799 MsG0280010366.01.T01:intron 50.0%
TCTCGGGCAGAGCTATGATA+GGG - Chr2:68579248-68579267 MsG0280010366.01.T01:intron 50.0%
TGACAACATTGGACCTCGCT+TGG - Chr2:68576851-68576870 MsG0280010366.01.T01:intron 50.0%
TGGATCCCGATTCAACCAGT+TGG - Chr2:68573443-68573462 MsG0280010366.01.T01:intron 50.0%
! CCGATTCAACCAGTTGGTCT+GGG - Chr2:68573449-68573468 MsG0280010366.01.T01:intron 50.0%
! GATGCTTTGTTCGGCCATTG+CGG + Chr2:68579200-68579219 None:intergenic 50.0%
! TAGGAGCACACTTGTTCCGA+TGG - Chr2:68580235-68580254 MsG0280010366.01.T01:intron 50.0%
!! AGAGTGGGAAAGGGTACCTA+TGG - Chr2:68579165-68579184 MsG0280010366.01.T01:intron 50.0%
!! AGCGAAGGTATTTCAGGGCA+TGG - Chr2:68578171-68578190 MsG0280010366.01.T01:intron 50.0%
!! GCGAAGGTATTTCAGGGCAT+GGG - Chr2:68578172-68578191 MsG0280010366.01.T01:intron 50.0%
!! GTGCTTTAGTGCTGGCGTAA+TGG - Chr2:68580877-68580896 MsG0280010366.01.T01:intron 50.0%
!! TGGGAAAGGGTACCTATGGA+GGG - Chr2:68579169-68579188 MsG0280010366.01.T01:intron 50.0%
!! TTCTCTTTTCAGGCGGCGTT+TGG - Chr2:68573082-68573101 MsG0280010366.01.T01:three_prime_UTR 50.0%
AGTAACCACGTGTGTCGCAC+TGG + Chr2:68576415-68576434 None:intergenic 55.0%
AGTGTAGCTTCCGGGGACAT+CGG - Chr2:68579224-68579243 MsG0280010366.01.T01:intron 55.0%
ATTGCGGTCAACCCCTCCAT+AGG + Chr2:68579184-68579203 None:intergenic 55.0%
CCAACTCTCCCAACACCATG+TGG - Chr2:68579012-68579031 MsG0280010366.01.T01:intron 55.0%
CCCGATTCAACCAGTTGGTC+TGG - Chr2:68573448-68573467 MsG0280010366.01.T01:intron 55.0%
CTACCAGACCGCTATGGTGT+GGG + Chr2:68573400-68573419 None:intergenic 55.0%
CTCTCGGGCAGAGCTATGAT+AGG - Chr2:68579247-68579266 MsG0280010366.01.T01:intron 55.0%
GACCGGACCGACTAAGTGTT+TGG - Chr2:68573423-68573442 MsG0280010366.01.T01:intron 55.0%
GGACGAAAACCAGGCGTGAA+AGG - Chr2:68577165-68577184 MsG0280010366.01.T01:intron 55.0%
GGCAGAGCTATGATAGGGAC+TGG - Chr2:68579253-68579272 MsG0280010366.01.T01:intron 55.0%
GGTGCATCCACTGTCTGGTT+TGG - Chr2:68577938-68577957 MsG0280010366.01.T01:intron 55.0%
GTAGTTCAAGTGGCCAAGCG+AGG + Chr2:68576867-68576886 None:intergenic 55.0%
GTCAAGCTACCAGACCGCTA+TGG + Chr2:68573406-68573425 None:intergenic 55.0%
GTGACCAGAGTCGTGTTCCT+TGG - Chr2:68573214-68573233 MsG0280010366.01.T01:CDS 55.0%
TAGCGGTCTGGTAGCTTGAC+CGG - Chr2:68573406-68573425 MsG0280010366.01.T01:intron 55.0%
TATGGAGGGGTTGACCGCAA+TGG - Chr2:68579183-68579202 MsG0280010366.01.T01:intron 55.0%
! CCACATGGTGTTGGGAGAGT+TGG + Chr2:68579015-68579034 None:intergenic 55.0%
! GCGAAGGATCAAGAGTGCGA+TGG - Chr2:68573134-68573153 MsG0280010366.01.T01:CDS 55.0%
!! GGGAAAGGGTACCTATGGAG+GGG - Chr2:68579170-68579189 MsG0280010366.01.T01:intron 55.0%
!! GTGGGAAAGGGTACCTATGG+AGG - Chr2:68579168-68579187 MsG0280010366.01.T01:intron 55.0%
CGATGAAGGTGAGGCTTGCG+AGG + Chr2:68575912-68575931 None:intergenic 60.0%
CTTGTCCAGTGCGACACACG+TGG - Chr2:68576407-68576426 MsG0280010366.01.T01:intron 60.0%
GCACTGGACCCACACCATAG+CGG - Chr2:68573389-68573408 MsG0280010366.01.T01:intron 60.0%
GCTACCAGACCGCTATGGTG+TGG + Chr2:68573401-68573420 None:intergenic 60.0%
GGACCCACACCATAGCGGTC+TGG - Chr2:68573394-68573413 MsG0280010366.01.T01:intron 65.0%
!! CTTCCGGGGACATCGGCTCT+CGG - Chr2:68579231-68579250 MsG0280010366.01.T01:intron 65.0%
!! TTCCGGGGACATCGGCTCTC+GGG - Chr2:68579232-68579251 MsG0280010366.01.T01:intron 65.0%
TGCCCGAGAGCCGATGTCCC+CGG + Chr2:68579237-68579256 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 68572975 68581339 68572975 ID=MsG0280010366.01;Name=MsG0280010366.01
Chr2 mRNA 68572975 68581339 68572975 ID=MsG0280010366.01.T01;Parent=MsG0280010366.01;Name=MsG0280010366.01.T01;_AED=0.30;_eAED=0.36;_QI=115|0.57|0.62|1|0.28|0.37|8|128|276
Chr2 exon 68572975 68573267 68572975 ID=MsG0280010366.01.T01:exon:14602;Parent=MsG0280010366.01.T01
Chr2 exon 68573687 68573780 68573687 ID=MsG0280010366.01.T01:exon:14601;Parent=MsG0280010366.01.T01
Chr2 exon 68575672 68575750 68575672 ID=MsG0280010366.01.T01:exon:14600;Parent=MsG0280010366.01.T01
Chr2 exon 68576064 68576243 68576064 ID=MsG0280010366.01.T01:exon:14599;Parent=MsG0280010366.01.T01
Chr2 exon 68577300 68577398 68577300 ID=MsG0280010366.01.T01:exon:14598;Parent=MsG0280010366.01.T01
Chr2 exon 68578120 68578165 68578120 ID=MsG0280010366.01.T01:exon:14597;Parent=MsG0280010366.01.T01
Chr2 exon 68578369 68578597 68578369 ID=MsG0280010366.01.T01:exon:14596;Parent=MsG0280010366.01.T01
Chr2 exon 68581286 68581339 68581286 ID=MsG0280010366.01.T01:exon:14595;Parent=MsG0280010366.01.T01
Chr2 five_prime_UTR 68581286 68581339 68581286 ID=MsG0280010366.01.T01:five_prime_utr;Parent=MsG0280010366.01.T01
Chr2 five_prime_UTR 68578537 68578597 68578537 ID=MsG0280010366.01.T01:five_prime_utr;Parent=MsG0280010366.01.T01
Chr2 CDS 68578369 68578536 68578369 ID=MsG0280010366.01.T01:cds;Parent=MsG0280010366.01.T01
Chr2 CDS 68578120 68578165 68578120 ID=MsG0280010366.01.T01:cds;Parent=MsG0280010366.01.T01
Chr2 CDS 68577300 68577398 68577300 ID=MsG0280010366.01.T01:cds;Parent=MsG0280010366.01.T01
Chr2 CDS 68576064 68576243 68576064 ID=MsG0280010366.01.T01:cds;Parent=MsG0280010366.01.T01
Chr2 CDS 68575672 68575750 68575672 ID=MsG0280010366.01.T01:cds;Parent=MsG0280010366.01.T01
Chr2 CDS 68573687 68573780 68573687 ID=MsG0280010366.01.T01:cds;Parent=MsG0280010366.01.T01
Chr2 CDS 68573103 68573267 68573103 ID=MsG0280010366.01.T01:cds;Parent=MsG0280010366.01.T01
Chr2 three_prime_UTR 68572975 68573102 68572975 ID=MsG0280010366.01.T01:three_prime_utr;Parent=MsG0280010366.01.T01
Gene Sequence

>MsG0280010366.01.T01

ATGCGTTATTTCAACATTATTAGAACTATTTGCACCCCTTCGTACACATTCACCACCAAATTCAACCTTCATTCTTCTTCTTTTTCATCATCTTCTACAAGCAATCATTCTAAACTCGATGTTGATTCTATCCTCGCAAGCCTCACCTTCATCGAAACTCTGATTCAGATGAATTGTCTGAAGCGGTCTTTCATAGATTCCTCTATTTTCTACGGTGGCGAGTCAGTCAAGAGACCTGATACCGAGAAAGTTGATGCTGCAAATGAGTTTGAAAGAATACTGAATGTATCACAGTTGCCAAACGTACCTCAGAAAAATTATTTATTGGCTCTTTGTGAGAGTGAACGGAAGGAGAATATTTTGGAGGTGTTGGAAATCATGGACATAAAAAAGCTTTCATCTGTTGGCTCTATAGCGAAGGTATTTCAGGGCATGGGAAGACTACTATTGGAACCTGTTGCAGAGGAGCTCCTTTTAGACTTCAAAGCAAGTGATTATGATGAAGATAATATTACAACCTTCATTGCTAGTTACACAGTCAGCATTCCAGATTTATCGGTAAGGAAATCCTCGTTAGATCATGCTCCCTTTTTATGCAATTGTATGAACTTTCAATTCAATGTTGACAAGAAGCATGGCTATTTTGTGATCCTACATCAATTGGAAGTATTTTCTCGAATTGAAGAGTCAGAAACCAATCATCGGCAAACTTGCATGGAGTTGTTTTTAGAAATGAAGGATAAGCTTGGTCTTTGGCCTTCACAAAAATGTTACGATTCTCTGTTCGTTCCTTCTGCAAATGCCAATGATAATTCACATAATGCTGAATGA

Protein sequence

>MsG0280010366.01.T01

MRYFNIIRTICTPSYTFTTKFNLHSSSFSSSSTSNHSKLDVDSILASLTFIETLIQMNCLKRSFIDSSIFYGGESVKRPDTEKVDAANEFERILNVSQLPNVPQKNYLLALCESERKENILEVLEIMDIKKLSSVGSIAKVFQGMGRLLLEPVAEELLLDFKASDYDEDNITTFIASYTVSIPDLSVRKSSLDHAPFLCNCMNFQFNVDKKHGYFVILHQLEVFSRIEESETNHRQTCMELFLEMKDKLGLWPSQKCYDSLFVPSANANDNSHNAE*