Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043313.01.T01 | XP_013441275.3 | 67.797 | 295 | 69 | 10 | 1 | 289 | 1 | 275 | 1.57E-122 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043313.01.T01 | Q7M443 | 32.986 | 288 | 157 | 9 | 14 | 290 | 2 | 264 | 3.79E-37 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043313.01.T01 | A0A396GKD7 | 67.797 | 295 | 69 | 10 | 1 | 289 | 1 | 275 | 7.50e-123 | 362 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048660.01 | MsG0880043313.01 | 0.805184 | 1.508766e-49 | 7.930284e-47 |
| MsG0180000129.01 | MsG0880043313.01 | 0.810878 | 9.258743e-51 | 5.647283e-48 |
| MsG0180004246.01 | MsG0880043313.01 | 0.800522 | 1.385221e-48 | 6.463725e-46 |
| MsG0180005485.01 | MsG0880043313.01 | 0.805640 | 1.210749e-49 | 6.438910e-47 |
| MsG0780040278.01 | MsG0880043313.01 | 0.813772 | 2.161397e-51 | 1.424276e-48 |
| MsG0780040700.01 | MsG0880043313.01 | 0.817084 | 3.960571e-52 | 2.856463e-49 |
| MsG0880043313.01 | MsG0880044043.01 | 0.828239 | 1.004150e-54 | 9.922942e-52 |
| MsG0880043313.01 | MsG0880044538.01 | 0.811945 | 5.431755e-51 | 3.407773e-48 |
| MsG0880043313.01 | MsG0880044893.01 | 0.807289 | 5.435914e-50 | 3.016074e-47 |
| MsG0880043313.01 | MsG0880045668.01 | 0.839729 | 1.330818e-57 | 1.854229e-54 |
| MsG0880043313.01 | MsG0880046334.01 | -0.835179 | 1.950617e-56 | 2.366830e-53 |
| MsG0880043313.01 | MsG0880047394.01 | 0.837668 | 4.537988e-57 | 5.937491e-54 |
| MsG0880043313.01 | MsG0880047657.01 | 0.821407 | 4.104675e-53 | 3.336463e-50 |
| MsG0280010675.01 | MsG0880043313.01 | 0.800706 | 1.270568e-48 | 5.956275e-46 |
| MsG0380014386.01 | MsG0880043313.01 | 0.800018 | 1.755022e-48 | 8.085021e-46 |
| MsG0480019065.01 | MsG0880043313.01 | 0.807474 | 4.966788e-50 | 2.769074e-47 |
| MsG0480021060.01 | MsG0880043313.01 | 0.803554 | 3.297681e-49 | 1.662227e-46 |
| MsG0380017423.01 | MsG0880043313.01 | 0.811624 | 6.379407e-51 | 3.968155e-48 |
| MsG0680030680.01 | MsG0880043313.01 | 0.800368 | 1.489461e-48 | 6.923211e-46 |
| MsG0280007877.01 | MsG0880043313.01 | 0.809748 | 1.622780e-50 | 9.607279e-48 |
| MsG0280009953.01 | MsG0880043313.01 | 0.813942 | 1.982477e-51 | 1.312391e-48 |
| MsG0680035707.01 | MsG0880043313.01 | 0.802240 | 6.162979e-49 | 3.003714e-46 |
| MsG0780036593.01 | MsG0880043313.01 | 0.819756 | 9.825478e-53 | 7.628614e-50 |
| MsG0780036595.01 | MsG0880043313.01 | 0.800520 | 1.386588e-48 | 6.469818e-46 |
| MsG0780036596.01 | MsG0880043313.01 | 0.833794 | 4.346387e-56 | 5.059318e-53 |
| MsG0780037808.01 | MsG0880043313.01 | 0.811999 | 5.286092e-51 | 3.321239e-48 |
| MsG0780038334.01 | MsG0880043313.01 | 0.800653 | 1.302984e-48 | 6.100284e-46 |
| MsG0780039186.01 | MsG0880043313.01 | 0.813525 | 2.449541e-51 | 1.603478e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043313.01.T01 | MTR_0002s0040 | 55.822 | 292 | 97 | 9 | 1 | 280 | 1 | 272 | 4.62e-95 | 283 |
| MsG0880043313.01.T01 | MTR_0263s0020 | 56.507 | 292 | 95 | 9 | 1 | 280 | 1 | 272 | 1.58e-94 | 281 |
| MsG0880043313.01.T01 | MTR_1457s0010 | 66.376 | 229 | 53 | 8 | 65 | 289 | 1 | 209 | 1.92e-92 | 273 |
| MsG0880043313.01.T01 | MTR_0002s1060 | 51.546 | 291 | 108 | 11 | 4 | 280 | 6 | 277 | 4.68e-75 | 232 |
| MsG0880043313.01.T01 | MTR_0062s0020 | 38.542 | 288 | 140 | 8 | 14 | 280 | 4 | 275 | 1.63e-48 | 164 |
| MsG0880043313.01.T01 | MTR_0062s0090 | 39.510 | 286 | 138 | 10 | 14 | 280 | 4 | 273 | 9.68e-48 | 161 |
| MsG0880043313.01.T01 | MTR_0062s0040 | 39.510 | 286 | 138 | 10 | 14 | 280 | 4 | 273 | 9.68e-48 | 161 |
| MsG0880043313.01.T01 | MTR_0062s0060 | 39.510 | 286 | 138 | 10 | 14 | 280 | 4 | 273 | 9.68e-48 | 161 |
| MsG0880043313.01.T01 | MTR_0443s0040 | 39.175 | 291 | 132 | 12 | 14 | 280 | 16 | 285 | 1.83e-47 | 161 |
| MsG0880043313.01.T01 | MTR_0062s0170 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 9.25e-39 | 139 |
| MsG0880043313.01.T01 | MTR_0062s0110 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 9.25e-39 | 139 |
| MsG0880043313.01.T01 | MTR_0062s0130 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 9.25e-39 | 139 |
| MsG0880043313.01.T01 | MTR_2g036240 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 9.25e-39 | 139 |
| MsG0880043313.01.T01 | MTR_2g036260 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 9.25e-39 | 139 |
| MsG0880043313.01.T01 | MTR_2g036290 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 9.25e-39 | 139 |
| MsG0880043313.01.T01 | MTR_8g046730 | 36.304 | 303 | 151 | 10 | 1 | 280 | 1 | 284 | 9.25e-39 | 139 |
| MsG0880043313.01.T01 | MTR_6g079630 | 34.307 | 274 | 155 | 8 | 13 | 280 | 33 | 287 | 4.56e-37 | 134 |
| MsG0880043313.01.T01 | MTR_2g096030 | 32.990 | 291 | 163 | 10 | 14 | 291 | 31 | 302 | 2.39e-33 | 124 |
| MsG0880043313.01.T01 | MTR_2g096040 | 32.806 | 253 | 146 | 6 | 39 | 283 | 26 | 262 | 7.62e-28 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGGAATATAAAAGATTT+TGG | 0.113401 | 8:+22420942 | None:intergenic |
| AATCGATTTCCATGTCATTT+TGG | 0.208877 | 8:-22420904 | MsG0880043313.01.T01:CDS |
| ACCACAGTGACGATATTAAT+TGG | 0.223661 | 8:-22420431 | MsG0880043313.01.T01:CDS |
| ATTTCGTTGTAGTCAATATC+AGG | 0.268052 | 8:+22420924 | None:intergenic |
| GGAGAGAAAGGATATTTAGT+AGG | 0.309124 | 8:+22420687 | None:intergenic |
| ATCCAAGACTACACGTTTGA+TGG | 0.357506 | 8:-22420612 | MsG0880043313.01.T01:CDS |
| TGTAGTGTTCATTAGTTTCA+TGG | 0.361129 | 8:+22420469 | None:intergenic |
| GAGAGAAAGGATATTTAGTA+GGG | 0.368934 | 8:+22420688 | None:intergenic |
| GTTGGAGAAATCTTCTTCAT+TGG | 0.372094 | 8:+22420560 | None:intergenic |
| GAATCGATCAACAGTGTTAC+CGG | 0.376698 | 8:+22420998 | None:intergenic |
| AAGATTTCTCCAACTACGTT+GGG | 0.393833 | 8:-22420551 | MsG0880043313.01.T01:CDS |
| CATCTTCGTTGTAAGTCTCA+TGG | 0.421031 | 8:+22420874 | None:intergenic |
| TACAAAGTCAGTCTCGTTAG+TGG | 0.444755 | 8:+22420377 | None:intergenic |
| GTAGTGTTCATTAGTTTCAT+GGG | 0.454037 | 8:+22420470 | None:intergenic |
| GGTTAGGCTGCATGTAGAAT+TGG | 0.458886 | 8:+22420400 | None:intergenic |
| AACACTACAAGCTACTCTAC+AGG | 0.460172 | 8:-22420455 | MsG0880043313.01.T01:CDS |
| CGGAAAATTCTATCCCGATT+GGG | 0.468618 | 8:-22420841 | MsG0880043313.01.T01:CDS |
| CCACAGTGACGATATTAATT+GGG | 0.471394 | 8:-22420430 | MsG0880043313.01.T01:CDS |
| TGCCATCAAACGTGTAGTCT+TGG | 0.476476 | 8:+22420610 | None:intergenic |
| CTAAGTACCACCTTGACCTT+GGG | 0.479326 | 8:+22420768 | None:intergenic |
| GATCGGTGCTTGCTCCTACT+AGG | 0.491839 | 8:+22420304 | None:intergenic |
| GCAGATATCAAGATCCCAAT+CGG | 0.494886 | 8:+22420827 | None:intergenic |
| TGTTCATTAGTTTCATGGGA+TGG | 0.496934 | 8:+22420474 | None:intergenic |
| TATAACGTCCCCAACGTAGT+TGG | 0.497459 | 8:+22420542 | None:intergenic |
| TTGCGAGTCTAACATAGATC+AGG | 0.504007 | 8:+22420352 | None:intergenic |
| CTGCGGTATACCACGTGTGC+AGG | 0.504725 | 8:-22420808 | MsG0880043313.01.T01:CDS |
| CCGGAAAATTCTATCCCGAT+TGG | 0.509755 | 8:-22420842 | MsG0880043313.01.T01:CDS |
| GCTAAGTACCACCTTGACCT+TGG | 0.518197 | 8:+22420767 | None:intergenic |
| ACAAAGTCAGTCTCGTTAGT+GGG | 0.526403 | 8:+22420378 | None:intergenic |
| ACGAAGACATCTAGTGGAAG+TGG | 0.532647 | 8:+22420261 | None:intergenic |
| CATGAGACTTACAACGAAGA+TGG | 0.533162 | 8:-22420873 | MsG0880043313.01.T01:CDS |
| ATCTTCGTTGTAAGTCTCAT+GGG | 0.537135 | 8:+22420875 | None:intergenic |
| GAGAAAGGATATTTAGTAGG+GGG | 0.545897 | 8:+22420690 | None:intergenic |
| ACTTACAACGAAGATGGAAA+AGG | 0.547716 | 8:-22420867 | MsG0880043313.01.T01:CDS |
| GTCAAGGTGGTACTTAGCAT+TGG | 0.558729 | 8:-22420762 | MsG0880043313.01.T01:CDS |
| TGATCTATGTTAGACTCGCA+AGG | 0.562801 | 8:-22420350 | MsG0880043313.01.T01:CDS |
| GAAGATTTCTCCAACTACGT+TGG | 0.566238 | 8:-22420552 | MsG0880043313.01.T01:CDS |
| ATTACGTCCGTCACGTGGAT+CGG | 0.567052 | 8:+22420287 | None:intergenic |
| TCGTGATATACAAAGTGTGC+AGG | 0.567577 | 8:-22420736 | MsG0880043313.01.T01:CDS |
| AAGGTGGTACTTAGCATTGG+TGG | 0.572579 | 8:-22420759 | MsG0880043313.01.T01:CDS |
| AGTTTCATGGGATGGAGCAA+TGG | 0.579271 | 8:+22420482 | None:intergenic |
| TTTCGTTGTAGTCAATATCA+GGG | 0.579571 | 8:+22420925 | None:intergenic |
| AACGAAGATGGAAAAGGCAC+CGG | 0.582283 | 8:-22420861 | MsG0880043313.01.T01:CDS |
| CAGATATCAAGATCCCAATC+GGG | 0.583723 | 8:+22420828 | None:intergenic |
| CTCGCAACGAAGACATCTAG+TGG | 0.584791 | 8:+22420255 | None:intergenic |
| TCAGTCTCGTTAGTGGGGTT+AGG | 0.588840 | 8:+22420384 | None:intergenic |
| AGAGAAAGGATATTTAGTAG+GGG | 0.590103 | 8:+22420689 | None:intergenic |
| GGGCAAAGGCCAAAATGACA+TGG | 0.593006 | 8:+22420895 | None:intergenic |
| GCGTTGAACCTTCATGAGAT+CGG | 0.594521 | 8:+22420227 | None:intergenic |
| AAAAGACTCAAGGAAGAGGT+AGG | 0.596213 | 8:-22420519 | MsG0880043313.01.T01:CDS |
| GGAACATTACGTCCGTCACG+TGG | 0.606987 | 8:+22420282 | None:intergenic |
| ACAATGTCTCATCTCATCAC+CGG | 0.607947 | 8:-22421017 | MsG0880043313.01.T01:CDS |
| CTGGTAATTAATTATTACGA+GGG | 0.608914 | 8:+22420139 | None:intergenic |
| GAGTTGCTCCGATCTCATGA+AGG | 0.616774 | 8:-22420235 | MsG0880043313.01.T01:CDS |
| CTCATGAAGGTTCAACGCAG+TGG | 0.621602 | 8:-22420222 | MsG0880043313.01.T01:CDS |
| GTTGTAAGTCTCATGGGCAA+AGG | 0.623453 | 8:+22420881 | None:intergenic |
| GATCTATGTTAGACTCGCAA+GGG | 0.624736 | 8:-22420349 | MsG0880043313.01.T01:CDS |
| GCTCAAGTATCCCAAGGTCA+AGG | 0.636705 | 8:-22420778 | MsG0880043313.01.T01:CDS |
| CAAAGTCAGTCTCGTTAGTG+GGG | 0.637774 | 8:+22420379 | None:intergenic |
| ACACTACAAGCTACTCTACA+GGG | 0.639330 | 8:-22420454 | MsG0880043313.01.T01:CDS |
| AGCTTGATATCCTGCACACG+TGG | 0.641314 | 8:+22420798 | None:intergenic |
| ATCGACGGCATTATCACACC+AGG | 0.643275 | 8:+22420650 | None:intergenic |
| GCAAGCACCGATCCACGTGA+CGG | 0.658997 | 8:-22420294 | MsG0880043313.01.T01:CDS |
| AGATTTCTCCAACTACGTTG+GGG | 0.668094 | 8:-22420550 | MsG0880043313.01.T01:CDS |
| TATCAAGCTCAAGTATCCCA+AGG | 0.668476 | 8:-22420784 | MsG0880043313.01.T01:CDS |
| CCCAATTAATATCGTCACTG+TGG | 0.680315 | 8:+22420430 | None:intergenic |
| GCAGGATATCATCAAGCACA+AGG | 0.687092 | 8:-22420718 | MsG0880043313.01.T01:CDS |
| CAAGTATCCCAAGGTCAAGG+TGG | 0.692556 | 8:-22420775 | MsG0880043313.01.T01:CDS |
| GCTGGTAATTAATTATTACG+AGG | 0.699438 | 8:+22420138 | None:intergenic |
| GATTGGGATCTTGATATCTG+CGG | 0.706223 | 8:-22420825 | MsG0880043313.01.T01:CDS |
| GGAAGAGGTAGGTATCAATG+TGG | 0.752690 | 8:-22420508 | MsG0880043313.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAAAAGATTTTGGGTA+TGG | + | Chr8:22420215-22420234 | None:intergenic | 20.0% |
| !! | CAGGGAATATAAAAGATTTT+GGG | + | Chr8:22420220-22420239 | None:intergenic | 25.0% |
| !! | TCAGGGAATATAAAAGATTT+TGG | + | Chr8:22420221-22420240 | None:intergenic | 25.0% |
| !! | TTCATTTTACGAGAATACAT+TGG | - | Chr8:22420182-22420201 | MsG0880043313.01.T01:CDS | 25.0% |
| AGAGAAAGGATATTTAGTAG+GGG | + | Chr8:22420474-22420493 | None:intergenic | 30.0% | |
| ATTTCGTTGTAGTCAATATC+AGG | + | Chr8:22420239-22420258 | None:intergenic | 30.0% | |
| GAGAGAAAGGATATTTAGTA+GGG | + | Chr8:22420475-22420494 | None:intergenic | 30.0% | |
| TATAAAAAGACTCAAGGAAG+AGG | - | Chr8:22420637-22420656 | MsG0880043313.01.T01:CDS | 30.0% | |
| TTTCGTTGTAGTCAATATCA+GGG | + | Chr8:22420238-22420257 | None:intergenic | 30.0% | |
| ! | GTAGTGTTCATTAGTTTCAT+GGG | + | Chr8:22420693-22420712 | None:intergenic | 30.0% |
| ! | TGTAGTGTTCATTAGTTTCA+TGG | + | Chr8:22420694-22420713 | None:intergenic | 30.0% |
| !! | AATCGATTTCCATGTCATTT+TGG | - | Chr8:22420256-22420275 | MsG0880043313.01.T01:CDS | 30.0% |
| !! | ACTTTTGAAAAACTCCTAGT+AGG | - | Chr8:22420842-22420861 | MsG0880043313.01.T01:CDS | 30.0% |
| !!! | TCTTTTTCAATAGGAGAGAA+AGG | + | Chr8:22420488-22420507 | None:intergenic | 30.0% |
| AAGATTTCTCCAACTACGTT+GGG | - | Chr8:22420609-22420628 | MsG0880043313.01.T01:CDS | 35.0% | |
| ACCACAGTGACGATATTAAT+TGG | - | Chr8:22420729-22420748 | MsG0880043313.01.T01:CDS | 35.0% | |
| ACTTACAACGAAGATGGAAA+AGG | - | Chr8:22420293-22420312 | MsG0880043313.01.T01:CDS | 35.0% | |
| ATCTTCGTTGTAAGTCTCAT+GGG | + | Chr8:22420288-22420307 | None:intergenic | 35.0% | |
| CCACAGTGACGATATTAATT+GGG | - | Chr8:22420730-22420749 | MsG0880043313.01.T01:CDS | 35.0% | |
| CTCCTATTGAAAAAGAATCC+TGG | - | Chr8:22420492-22420511 | MsG0880043313.01.T01:CDS | 35.0% | |
| GAGAAAGGATATTTAGTAGG+GGG | + | Chr8:22420473-22420492 | None:intergenic | 35.0% | |
| GGACGTTATAAAAAGACTCA+AGG | - | Chr8:22420631-22420650 | MsG0880043313.01.T01:CDS | 35.0% | |
| GGAGAGAAAGGATATTTAGT+AGG | + | Chr8:22420476-22420495 | None:intergenic | 35.0% | |
| GTTGGAGAAATCTTCTTCAT+TGG | + | Chr8:22420603-22420622 | None:intergenic | 35.0% | |
| ! | TGTTCATTAGTTTCATGGGA+TGG | + | Chr8:22420689-22420708 | None:intergenic | 35.0% |
| !!! | CACCAGGATTCTTTTTCAAT+AGG | + | Chr8:22420497-22420516 | None:intergenic | 35.0% |
| AAAAGACTCAAGGAAGAGGT+AGG | - | Chr8:22420641-22420660 | MsG0880043313.01.T01:CDS | 40.0% | |
| AACACTACAAGCTACTCTAC+AGG | - | Chr8:22420705-22420724 | MsG0880043313.01.T01:CDS | 40.0% | |
| ACAAAGTCAGTCTCGTTAGT+GGG | + | Chr8:22420785-22420804 | None:intergenic | 40.0% | |
| ACACTACAAGCTACTCTACA+GGG | - | Chr8:22420706-22420725 | MsG0880043313.01.T01:CDS | 40.0% | |
| AGATTTCTCCAACTACGTTG+GGG | - | Chr8:22420610-22420629 | MsG0880043313.01.T01:CDS | 40.0% | |
| ATCCAAGACTACACGTTTGA+TGG | - | Chr8:22420548-22420567 | MsG0880043313.01.T01:CDS | 40.0% | |
| CAGATATCAAGATCCCAATC+GGG | + | Chr8:22420335-22420354 | None:intergenic | 40.0% | |
| CATCTTCGTTGTAAGTCTCA+TGG | + | Chr8:22420289-22420308 | None:intergenic | 40.0% | |
| CATGAGACTTACAACGAAGA+TGG | - | Chr8:22420287-22420306 | MsG0880043313.01.T01:CDS | 40.0% | |
| CCCAATTAATATCGTCACTG+TGG | + | Chr8:22420733-22420752 | None:intergenic | 40.0% | |
| CGGAAAATTCTATCCCGATT+GGG | - | Chr8:22420319-22420338 | MsG0880043313.01.T01:CDS | 40.0% | |
| GAAGATTTCTCCAACTACGT+TGG | - | Chr8:22420608-22420627 | MsG0880043313.01.T01:CDS | 40.0% | |
| GAATCGATCAACAGTGTTAC+CGG | + | Chr8:22420165-22420184 | None:intergenic | 40.0% | |
| GATCTATGTTAGACTCGCAA+GGG | - | Chr8:22420811-22420830 | MsG0880043313.01.T01:CDS | 40.0% | |
| GATTGGGATCTTGATATCTG+CGG | - | Chr8:22420335-22420354 | MsG0880043313.01.T01:CDS | 40.0% | |
| GCAGATATCAAGATCCCAAT+CGG | + | Chr8:22420336-22420355 | None:intergenic | 40.0% | |
| TACAAAGTCAGTCTCGTTAG+TGG | + | Chr8:22420786-22420805 | None:intergenic | 40.0% | |
| TATCAAGCTCAAGTATCCCA+AGG | - | Chr8:22420376-22420395 | MsG0880043313.01.T01:CDS | 40.0% | |
| TCGTGATATACAAAGTGTGC+AGG | - | Chr8:22420424-22420443 | MsG0880043313.01.T01:CDS | 40.0% | |
| TGATCTATGTTAGACTCGCA+AGG | - | Chr8:22420810-22420829 | MsG0880043313.01.T01:CDS | 40.0% | |
| TTGCGAGTCTAACATAGATC+AGG | + | Chr8:22420811-22420830 | None:intergenic | 40.0% | |
| ! | AACGCAGTGGCATTTTCATT+TGG | - | Chr8:22420951-22420970 | MsG0880043313.01.T01:CDS | 40.0% |
| ! | CCAATCGGGATAGAATTTTC+CGG | + | Chr8:22420321-22420340 | None:intergenic | 40.0% |
| !! | GATCTTTTTGAGCGAATCGA+CGG | + | Chr8:22420528-22420547 | None:intergenic | 40.0% |
| ACGAAGACATCTAGTGGAAG+TGG | + | Chr8:22420902-22420921 | None:intergenic | 45.0% | |
| AGTTTCATGGGATGGAGCAA+TGG | + | Chr8:22420681-22420700 | None:intergenic | 45.0% | |
| CAAAGTCAGTCTCGTTAGTG+GGG | + | Chr8:22420784-22420803 | None:intergenic | 45.0% | |
| CCGGAAAATTCTATCCCGAT+TGG | - | Chr8:22420318-22420337 | MsG0880043313.01.T01:CDS | 45.0% | |
| CTAAGTACCACCTTGACCTT+GGG | + | Chr8:22420395-22420414 | None:intergenic | 45.0% | |
| GCAGGATATCATCAAGCACA+AGG | - | Chr8:22420442-22420461 | MsG0880043313.01.T01:CDS | 45.0% | |
| GCGTTGAACCTTCATGAGAT+CGG | + | Chr8:22420936-22420955 | None:intergenic | 45.0% | |
| GGAAGAGGTAGGTATCAATG+TGG | - | Chr8:22420652-22420671 | MsG0880043313.01.T01:CDS | 45.0% | |
| GGTTAGGCTGCATGTAGAAT+TGG | + | Chr8:22420763-22420782 | None:intergenic | 45.0% | |
| GTCAAGGTGGTACTTAGCAT+TGG | - | Chr8:22420398-22420417 | MsG0880043313.01.T01:CDS | 45.0% | |
| GTTGTAAGTCTCATGGGCAA+AGG | + | Chr8:22420282-22420301 | None:intergenic | 45.0% | |
| TATAACGTCCCCAACGTAGT+TGG | + | Chr8:22420621-22420640 | None:intergenic | 45.0% | |
| TGCCATCAAACGTGTAGTCT+TGG | + | Chr8:22420553-22420572 | None:intergenic | 45.0% | |
| ! | AACGAAGATGGAAAAGGCAC+CGG | - | Chr8:22420299-22420318 | MsG0880043313.01.T01:CDS | 45.0% |
| ! | AAGGTGGTACTTAGCATTGG+TGG | - | Chr8:22420401-22420420 | MsG0880043313.01.T01:CDS | 45.0% |
| AGCTTGATATCCTGCACACG+TGG | + | Chr8:22420365-22420384 | None:intergenic | 50.0% | |
| ATCGACGGCATTATCACACC+AGG | + | Chr8:22420513-22420532 | None:intergenic | 50.0% | |
| ATTACGTCCGTCACGTGGAT+CGG | + | Chr8:22420876-22420895 | None:intergenic | 50.0% | |
| CAAGTATCCCAAGGTCAAGG+TGG | - | Chr8:22420385-22420404 | MsG0880043313.01.T01:CDS | 50.0% | |
| CTCATGAAGGTTCAACGCAG+TGG | - | Chr8:22420938-22420957 | MsG0880043313.01.T01:CDS | 50.0% | |
| CTCGCAACGAAGACATCTAG+TGG | + | Chr8:22420908-22420927 | None:intergenic | 50.0% | |
| GAGTTGCTCCGATCTCATGA+AGG | - | Chr8:22420925-22420944 | MsG0880043313.01.T01:CDS | 50.0% | |
| GCTAAGTACCACCTTGACCT+TGG | + | Chr8:22420396-22420415 | None:intergenic | 50.0% | |
| GCTCAAGTATCCCAAGGTCA+AGG | - | Chr8:22420382-22420401 | MsG0880043313.01.T01:CDS | 50.0% | |
| GGGCAAAGGCCAAAATGACA+TGG | + | Chr8:22420268-22420287 | None:intergenic | 50.0% | |
| TCAGTCTCGTTAGTGGGGTT+AGG | + | Chr8:22420779-22420798 | None:intergenic | 50.0% | |
| GGAACATTACGTCCGTCACG+TGG | + | Chr8:22420881-22420900 | None:intergenic | 55.0% | |
| ! | GATCGGTGCTTGCTCCTACT+AGG | + | Chr8:22420859-22420878 | None:intergenic | 55.0% |
| CTGCGGTATACCACGTGTGC+AGG | - | Chr8:22420352-22420371 | MsG0880043313.01.T01:CDS | 60.0% | |
| !! | GCAAGCACCGATCCACGTGA+CGG | - | Chr8:22420866-22420885 | MsG0880043313.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 22420146 | 22421036 | 22420146 | ID=MsG0880043313.01;Name=MsG0880043313.01 |
| Chr8 | mRNA | 22420146 | 22421036 | 22420146 | ID=MsG0880043313.01.T01;Parent=MsG0880043313.01;Name=MsG0880043313.01.T01;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|296 |
| Chr8 | exon | 22420146 | 22421036 | 22420146 | ID=MsG0880043313.01.T01:exon:64262;Parent=MsG0880043313.01.T01 |
| Chr8 | CDS | 22420146 | 22421036 | 22420146 | ID=MsG0880043313.01.T01:cds;Parent=MsG0880043313.01.T01 |
| Gene Sequence |
| Protein sequence |
