AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044538.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044538.01.T01 MTR_8g464570 90.196 561 6 1 38 549 112 672 0.0 1037
MsG0880044538.01.T01 MTR_2g081110 67.318 563 124 5 38 548 113 667 0.0 779
MsG0880044538.01.T01 MTR_7g012260 46.920 552 222 11 48 543 170 706 4.55e-168 493
MsG0880044538.01.T01 MTR_3g109030 36.059 538 270 12 34 512 123 645 3.28e-96 308
MsG0880044538.01.T01 MTR_4g058730 33.524 525 274 11 34 500 104 611 5.37e-92 294
MsG0880044538.01.T01 MTR_2g460590 33.627 568 304 13 34 544 93 644 4.83e-90 291
MsG0880044538.01.T01 MTR_2g094860 33.846 520 285 12 35 504 123 633 1.41e-89 290
MsG0880044538.01.T01 MTR_1g064240 32.389 565 309 11 34 541 116 664 2.83e-86 282
MsG0880044538.01.T01 MTR_4g130820 34.417 523 275 11 35 501 146 656 4.94e-86 281
MsG0880044538.01.T01 MTR_3g091080 33.396 533 305 12 14 501 107 634 9.27e-86 280
MsG0880044538.01.T01 MTR_3g088875 34.489 519 280 11 40 504 87 599 1.13e-83 275
MsG0880044538.01.T01 MTR_7g117310 31.509 530 279 10 36 501 77 586 1.05e-80 266
MsG0880044538.01.T01 MTR_7g117310 31.509 530 279 10 36 501 131 640 2.11e-80 266
MsG0880044538.01.T01 MTR_7g117310 31.509 530 279 10 36 501 143 652 2.26e-80 266
MsG0880044538.01.T01 MTR_8g027755 31.181 542 317 11 14 504 111 647 5.77e-80 265
MsG0880044538.01.T01 MTR_6g477760 31.963 535 287 15 39 509 174 695 3.12e-76 255
MsG0880044538.01.T01 MTR_6g075290 31.949 554 295 15 17 505 18 554 2.32e-70 236
MsG0880044538.01.T01 MTR_6g075290 32.270 533 281 14 36 505 200 715 7.63e-70 238
MsG0880044538.01.T01 MTR_6g075290 32.270 533 281 14 36 505 241 756 2.51e-69 238
MsG0880044538.01.T01 MTR_5g007630 30.168 537 284 14 36 506 217 728 4.20e-66 228
MsG0880044538.01.T01 MTR_6g075440 29.358 545 283 16 36 506 217 733 7.91e-64 223
MsG0880044538.01.T01 MTR_6g075440 29.358 545 283 16 36 506 217 733 8.55e-64 223
MsG0880044538.01.T01 MTR_1g028370 28.736 522 320 14 35 510 130 645 4.47e-58 206
MsG0880044538.01.T01 MTR_7g034605 30.499 541 294 17 36 511 91 614 8.73e-57 202
MsG0880044538.01.T01 MTR_6g075390 29.352 494 258 18 40 466 167 636 1.95e-52 190
MsG0880044538.01.T01 MTR_6g076060 27.897 466 253 11 106 506 14 461 1.08e-46 171
MsG0880044538.01.T01 MTR_6g075410 26.345 539 298 19 38 505 148 658 8.07e-42 159
MsG0880044538.01.T01 MTR_2g094810 31.250 112 71 2 73 179 12 122 1.95e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044538.01.T01 AT5G54250 69.718 568 115 4 36 548 127 692 0.0 798
MsG0880044538.01.T01 AT5G54250 69.718 568 115 4 36 548 127 692 0.0 798
MsG0880044538.01.T01 AT5G54250 69.718 568 115 4 36 548 127 692 0.0 798
MsG0880044538.01.T01 AT5G54250 68.838 568 115 5 36 548 127 687 0.0 782
MsG0880044538.01.T01 AT5G15410 45.552 562 244 10 39 543 165 721 1.48e-157 467
MsG0880044538.01.T01 AT5G15410 45.552 562 244 10 39 543 166 722 2.20e-157 467
MsG0880044538.01.T01 AT2G28260 35.067 519 282 13 34 504 73 584 6.23e-92 295
MsG0880044538.01.T01 AT2G28260 35.067 519 282 13 34 504 113 624 1.86e-91 295
MsG0880044538.01.T01 AT2G24610 34.758 538 277 12 34 512 120 642 4.88e-91 295
MsG0880044538.01.T01 AT2G24610 34.823 537 276 12 34 511 135 656 1.39e-90 294
MsG0880044538.01.T01 AT4G30360 34.387 538 280 11 35 513 120 643 1.36e-89 291
MsG0880044538.01.T01 AT5G53130 34.961 512 282 13 35 501 131 636 1.51e-89 291
MsG0880044538.01.T01 AT5G14870 34.515 536 284 14 34 512 85 610 2.93e-89 290
MsG0880044538.01.T01 AT3G48010 34.572 538 268 12 34 504 90 610 1.02e-84 278
MsG0880044538.01.T01 AT2G23980 32.468 539 286 12 35 510 150 673 4.67e-82 271
MsG0880044538.01.T01 AT2G23980 32.468 539 286 12 35 510 150 673 4.67e-82 271
MsG0880044538.01.T01 AT2G23980 32.468 539 286 12 35 510 150 673 4.67e-82 271
MsG0880044538.01.T01 AT2G23980 32.468 539 286 12 35 510 150 673 4.67e-82 271
MsG0880044538.01.T01 AT2G23980 32.468 539 286 12 35 510 150 673 4.67e-82 271
MsG0880044538.01.T01 AT4G01010 33.333 546 296 15 35 531 115 641 8.55e-82 270
MsG0880044538.01.T01 AT4G01010 33.333 546 296 15 35 531 115 641 8.55e-82 270
MsG0880044538.01.T01 AT2G23980 32.282 539 287 12 35 510 123 646 9.99e-82 270
MsG0880044538.01.T01 AT5G57940 33.521 534 274 14 35 504 135 651 3.32e-81 268
MsG0880044538.01.T01 AT5G57940 33.521 534 274 14 35 504 135 651 3.32e-81 268
MsG0880044538.01.T01 AT5G57940 33.521 534 274 14 35 504 128 644 3.37e-81 268
MsG0880044538.01.T01 AT4G30560 32.775 537 286 13 35 510 124 646 2.64e-80 266
MsG0880044538.01.T01 AT4G30560 32.775 537 286 13 35 510 124 646 2.64e-80 266
MsG0880044538.01.T01 AT4G30560 32.775 537 286 13 35 510 124 646 2.64e-80 266
MsG0880044538.01.T01 AT1G15990 32.902 541 303 13 18 504 121 655 2.79e-80 266
MsG0880044538.01.T01 AT4G30560 32.778 540 282 15 35 510 150 672 3.65e-80 266
MsG0880044538.01.T01 AT4G30560 32.778 540 282 15 35 510 150 672 3.65e-80 266
MsG0880044538.01.T01 AT1G19780 32.443 524 294 11 35 504 144 661 2.17e-79 265
MsG0880044538.01.T01 AT2G23980 31.139 562 286 13 35 510 150 696 4.54e-77 259
MsG0880044538.01.T01 AT2G23980 31.139 562 286 13 35 510 150 696 4.54e-77 259
MsG0880044538.01.T01 AT2G23980 31.139 562 286 13 35 510 150 696 4.54e-77 259
MsG0880044538.01.T01 AT2G23980 31.139 562 286 13 35 510 150 696 4.54e-77 259
MsG0880044538.01.T01 AT2G46430 31.358 523 293 13 35 504 119 628 3.21e-75 252
MsG0880044538.01.T01 AT2G46430 31.358 523 293 13 35 504 119 628 3.21e-75 252
MsG0880044538.01.T01 AT1G01340 31.927 545 302 15 36 531 111 635 1.46e-73 248
MsG0880044538.01.T01 AT1G01340 31.927 545 302 15 36 531 116 640 1.49e-73 248
MsG0880044538.01.T01 AT3G17700 31.354 539 281 17 28 498 228 745 2.32e-72 246
MsG0880044538.01.T01 AT1G19780 33.879 428 231 8 128 504 24 450 1.33e-70 236
MsG0880044538.01.T01 AT3G17690 31.055 512 294 12 43 504 213 715 4.46e-66 228
MsG0880044538.01.T01 AT3G17700 31.603 443 230 12 41 430 245 667 3.66e-62 217
MsG0880044538.01.T01 AT2G46450 30.655 473 262 13 85 504 87 546 1.46e-58 206
MsG0880044538.01.T01 AT2G46450 30.655 473 262 13 85 504 100 559 1.56e-58 206
MsG0880044538.01.T01 AT2G46450 30.134 521 291 16 39 504 80 582 1.61e-58 206
MsG0880044538.01.T01 AT2G46450 30.134 521 291 16 39 504 80 582 1.61e-58 206
MsG0880044538.01.T01 AT3G17690 30.607 428 247 9 43 428 213 632 1.49e-54 195
MsG0880044538.01.T01 AT2G46440 29.231 520 301 15 39 504 80 586 1.59e-47 175
MsG0880044538.01.T01 AT2G46440 29.750 400 225 10 158 504 12 408 2.55e-39 149
MsG0880044538.01.T01 AT3G17690 26.710 307 180 6 43 307 213 516 3.74e-24 106

Find 149 sgRNAs with CRISPR-Local

Find 677 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATACTGAGTGATAAATTT+TGG 0.096669 8:+44044488 None:intergenic
GTATATGTTTATTACTATTT+TGG 0.167292 8:-44036903 MsG0880044538.01.T01:three_prime_UTR
TGACTGATGCTTTGCACTTT+TGG 0.188658 8:-44047530 MsG0880044538.01.T01:CDS
TTGAGAACAATATGTGAATT+TGG 0.189461 8:-44036989 MsG0880044538.01.T01:exon
CATCTTGACAAGGGCCTTCT+AGG 0.213081 8:+44037093 None:intergenic
TCAATTATGGAGCTTATAAA+TGG 0.229313 8:-44041665 MsG0880044538.01.T01:CDS
TGTCATAAGCCAATGTATTA+TGG 0.245750 8:-44041780 MsG0880044538.01.T01:CDS
GGGGCATGCTGGTACTTATT+GGG 0.277358 8:-44041876 MsG0880044538.01.T01:CDS
ACAAATAACATTCTTTGAAC+TGG 0.284384 8:+44038034 None:intergenic
TGAGACATTTGGATGCTCTT+TGG 0.287862 8:+44041850 None:intergenic
GAATGGCATGGGCAGGGAAT+AGG 0.293158 8:-44041725 MsG0880044538.01.T01:CDS
ATACCATCTTTGTTTAGATT+TGG 0.299313 8:-44040420 MsG0880044538.01.T01:CDS
GGTGCCATTGTTTCAACATA+TGG 0.301666 8:-44040243 MsG0880044538.01.T01:CDS
AGTCCTGATCACTTCAATTA+TGG 0.314000 8:-44041678 MsG0880044538.01.T01:CDS
ATGTCTCTTCTTAAACCTTC+AGG 0.316026 8:+44040446 None:intergenic
AGGGGCATGCTGGTACTTAT+TGG 0.318713 8:-44041877 MsG0880044538.01.T01:CDS
AGTATGTGACACAACATTTC+AGG 0.324397 8:-44037808 MsG0880044538.01.T01:intron
GGTGGCTATTCCTTCTTTGT+TGG 0.326354 8:-44044574 MsG0880044538.01.T01:CDS
CTTGTCAAGATGTTCTTCAT+TGG 0.326604 8:-44037082 MsG0880044538.01.T01:CDS
ACATTGCTCTTTGAGACATT+TGG 0.328723 8:+44041839 None:intergenic
ATCAACAAATGTTGGATCAT+TGG 0.340477 8:-44036839 MsG0880044538.01.T01:three_prime_UTR
GAAATTCTGACCTGAGGTAT+AGG 0.359819 8:+44047363 None:intergenic
CTTGAAACAACAGAGGCTTT+TGG 0.367215 8:-44037851 MsG0880044538.01.T01:CDS
TCGTCCCCACTGAAGTTTCC+TGG 0.377802 8:+44037944 None:intergenic
CAAAATACGCAATCATGTTA+AGG 0.380943 8:+44044403 None:intergenic
CGACGCACACAAAACCTATC+TGG 0.382347 8:-44044459 MsG0880044538.01.T01:CDS
AAATCATCTTGATTAGGCTT+TGG 0.383244 8:+44037018 None:intergenic
AATGGCATGGGCAGGGAATA+GGG 0.385231 8:-44041724 MsG0880044538.01.T01:CDS
TTGAAAAGTTGCTGCATGTT+AGG 0.385441 8:-44037968 MsG0880044538.01.T01:CDS
AGCGTGGCCCGTGCGACACT+TGG 0.388080 8:-44036779 MsG0880044538.01.T01:three_prime_UTR
AAGTCAAAATCATCTTGATT+AGG 0.388135 8:+44037012 None:intergenic
GTGGGGACGAGCTCCTTTCA+TGG 0.390524 8:-44037931 MsG0880044538.01.T01:CDS
TGAGAACAATATGTGAATTT+GGG 0.397252 8:-44036988 MsG0880044538.01.T01:three_prime_UTR
ACTCACCAGGGTGGAGAACT+TGG 0.397276 8:-44037191 MsG0880044538.01.T01:CDS
TTGTCAAGATGTTCTTCATT+GGG 0.410507 8:-44037081 MsG0880044538.01.T01:CDS
TCAACCCATCTCTTAATACT+TGG 0.413143 8:+44037987 None:intergenic
TGTTATTCTTCCTATACCTC+AGG 0.425121 8:-44047373 MsG0880044538.01.T01:intron
AAAGCTTACCGTTTCTCCCT+TGG 0.426701 8:+44040169 None:intergenic
CAGCAACCGGTGAATATAGA+AGG 0.426896 8:-44047754 MsG0880044538.01.T01:intron
CACCGCGGATGGCCGCCGTT+TGG 0.427273 8:-44047445 MsG0880044538.01.T01:CDS
AAAATACGCAATCATGTTAA+GGG 0.435079 8:+44044404 None:intergenic
AACCATTCGGCCACCGCGGA+TGG 0.438449 8:-44047456 MsG0880044538.01.T01:CDS
TTGTTTAGATTTGGTGAGAC+AGG 0.439170 8:-44040411 MsG0880044538.01.T01:intron
AACGTTGGGCTGCTATGCGC+GGG 0.442234 8:-44040499 MsG0880044538.01.T01:CDS
AAGTTTGTTGAATAAAGATA+TGG 0.442850 8:-44041751 MsG0880044538.01.T01:CDS
GCTCCATAATTGAAGTGATC+AGG 0.448645 8:+44041675 None:intergenic
TGTCGTTTATAAGACCTAGA+AGG 0.456991 8:-44037107 MsG0880044538.01.T01:CDS
GTTTCAACATATGGATGAGC+TGG 0.463529 8:-44040234 MsG0880044538.01.T01:CDS
GAGCAATGTTATAAAACAAA+TGG 0.470100 8:-44041825 MsG0880044538.01.T01:CDS
ACTTACATTTGCTAACCATT+CGG 0.472710 8:-44047469 MsG0880044538.01.T01:CDS
TGCATACTAAAATAGGCTGC+AGG 0.474208 8:-44041897 MsG0880044538.01.T01:intron
CTCAGTTGCGTCATCGTTCG+CGG 0.474404 8:+44047834 None:intergenic
TCAAATTCATCAACAAATGT+TGG 0.479355 8:-44036847 MsG0880044538.01.T01:three_prime_UTR
GGGTGCTGTGGCCATACAAT+TGG 0.479594 8:-44037169 MsG0880044538.01.T01:CDS
GTGGAGAACTTGGGGTGCTG+TGG 0.480502 8:-44037181 MsG0880044538.01.T01:CDS
TAACTATGAAAGACAACGTT+GGG 0.483093 8:-44040513 MsG0880044538.01.T01:CDS
GAATAAAGATATGGCAAGAA+TGG 0.483868 8:-44041742 MsG0880044538.01.T01:CDS
CCTTCTCCATGCCAATTGTA+TGG 0.485060 8:+44037158 None:intergenic
GGCCATCCGCGGTGGCCGAA+TGG 0.486336 8:+44047454 None:intergenic
ATTCCTTCTTTGTTGGAGCA+AGG 0.491815 8:-44044567 MsG0880044538.01.T01:CDS
CTTGTACTTCCATAATACAT+TGG 0.494028 8:+44041771 None:intergenic
ATGGCAAGAATGGCATGGGC+AGG 0.499094 8:-44041732 MsG0880044538.01.T01:CDS
AATAGGCTGCAGGGGCATGC+TGG 0.499732 8:-44041887 MsG0880044538.01.T01:intron
AAGAATGTTATTTGTAGTGA+GGG 0.501208 8:-44038026 MsG0880044538.01.T01:CDS
GATAAGCAAGAGCGACCAAA+CGG 0.501791 8:+44047430 None:intergenic
CGAGGAAGAAGAGCAGCAAC+CGG 0.504891 8:-44047767 MsG0880044538.01.T01:CDS
AATTGACCTTCTATATTCAC+CGG 0.509956 8:+44047748 None:intergenic
CAAATAACATTCTTTGAACT+GGG 0.515194 8:+44038035 None:intergenic
CATCATCATCGACGTCGTCT+AGG 0.516565 8:+44047791 None:intergenic
AAAGAATGTTATTTGTAGTG+AGG 0.517668 8:-44038027 MsG0880044538.01.T01:CDS
ACAAATCAAGAGAAATATGT+AGG 0.519223 8:-44036930 MsG0880044538.01.T01:three_prime_UTR
AGCAGCCAAGTATTAAGAGA+TGG 0.519899 8:-44037992 MsG0880044538.01.T01:CDS
CGCAACTGAGGACAGTGAGC+CGG 0.523356 8:-44047821 MsG0880044538.01.T01:CDS
CTCACCAGGGTGGAGAACTT+GGG 0.524503 8:-44037190 MsG0880044538.01.T01:CDS
TGCGTTTCGCCGTCTTGAAG+CGG 0.528092 8:+44047496 None:intergenic
GTACACGTTTGTGAAGGAAA+AGG 0.529854 8:-44037235 MsG0880044538.01.T01:CDS
AGAAGCAAGTGATGCAATTG+AGG 0.532010 8:-44040601 MsG0880044538.01.T01:CDS
GAACCTTGCTCCAACAAAGA+AGG 0.532214 8:+44044564 None:intergenic
GCGTGGCCCGTGCGACACTT+GGG 0.532805 8:-44036778 MsG0880044538.01.T01:three_prime_UTR
TCACCAAATCTAAACAAAGA+TGG 0.533108 8:+44040417 None:intergenic
GATATTCACCAAGGGAGAAA+CGG 0.543542 8:-44040177 MsG0880044538.01.T01:intron
AAAAGGTGAAGAGAAGTGCT+AGG 0.545216 8:-44037218 MsG0880044538.01.T01:CDS
TCATCAGATTGTGCTTTGGG+TGG 0.548545 8:-44044592 MsG0880044538.01.T01:intron
GTCTTCTCAAACACCATGAA+AGG 0.551605 8:+44037918 None:intergenic
TGTTATAAAACAAATGGTTG+TGG 0.551925 8:-44041819 MsG0880044538.01.T01:CDS
AATTGGCATGGAGAAGGTAC+AGG 0.553744 8:-44037152 MsG0880044538.01.T01:CDS
GGAGCAAGGTTCAGTTACAT+TGG 0.555983 8:-44044553 MsG0880044538.01.T01:CDS
GACCAAACGGCGGCCATCCG+CGG 0.556132 8:+44047443 None:intergenic
GCAGCCAAGTATTAAGAGAT+GGG 0.558128 8:-44037991 MsG0880044538.01.T01:CDS
CAACGTTGGGCTGCTATGCG+CGG 0.559678 8:-44040500 MsG0880044538.01.T01:CDS
ATCAACACCCAAGTGTCGCA+CGG 0.566528 8:+44036771 None:intergenic
CCATACAATTGGCATGGAGA+AGG 0.568101 8:-44037158 MsG0880044538.01.T01:CDS
ACAATATGTGAATTTGGGTG+TGG 0.568124 8:-44036983 MsG0880044538.01.T01:three_prime_UTR
AAGATATGGCAAGAATGGCA+TGG 0.577883 8:-44041737 MsG0880044538.01.T01:CDS
CATGGAGAAGGTACAGGCAT+AGG 0.578603 8:-44037146 MsG0880044538.01.T01:CDS
AGATATGGCAAGAATGGCAT+GGG 0.580974 8:-44041736 MsG0880044538.01.T01:CDS
GCATACTAAAATAGGCTGCA+GGG 0.582067 8:-44041896 MsG0880044538.01.T01:intron
TCAAGAGAAATATGTAGGCA+TGG 0.583805 8:-44036925 MsG0880044538.01.T01:three_prime_UTR
AGTGCTAGGTATTACTCACC+AGG 0.585592 8:-44037204 MsG0880044538.01.T01:CDS
GGGCATGCTGGTACTTATTG+GGG 0.585699 8:-44041875 MsG0880044538.01.T01:CDS
TGAGGATAAGAAATGTTGAA+TGG 0.586161 8:-44040583 MsG0880044538.01.T01:CDS
AGTGGAAGACGCTCTATGAA+AGG 0.586505 8:+44037896 None:intergenic
TCAACACCCAAGTGTCGCAC+GGG 0.591347 8:+44036772 None:intergenic
TGGCAAGAATGGCATGGGCA+GGG 0.594198 8:-44041731 MsG0880044538.01.T01:CDS
TGTTAGGTACACGTTTGTGA+AGG 0.596414 8:-44037241 MsG0880044538.01.T01:intron
TATCTTCCTCCGCTTCAAGA+CGG 0.596503 8:-44047505 MsG0880044538.01.T01:CDS
GAAATGTTGAATGGTGGATG+AGG 0.599633 8:-44040574 MsG0880044538.01.T01:CDS
AGTTGCTGCATGTTAGGACC+AGG 0.599864 8:-44037962 MsG0880044538.01.T01:CDS
TTTAAATAGTAACTAGAGCG+TGG 0.600428 8:-44036795 MsG0880044538.01.T01:three_prime_UTR
ACGTCGTCTAGGTAGTTCTC+CGG 0.603625 8:+44047802 None:intergenic
TCATCCATATGTTGAAACAA+TGG 0.605878 8:+44040239 None:intergenic
CTGTGGCCATACAATTGGCA+TGG 0.607381 8:-44037164 MsG0880044538.01.T01:CDS
CGCGAACGATGACGCAACTG+AGG 0.612383 8:-44047833 MsG0880044538.01.T01:CDS
GGGCAGGGAATAGGGAAGCA+AGG 0.613702 8:-44041716 MsG0880044538.01.T01:CDS
TCACCAGGGTGGAGAACTTG+GGG 0.614184 8:-44037189 MsG0880044538.01.T01:CDS
CAATGAAGAACATCTTGACA+AGG 0.615745 8:+44037083 None:intergenic
GAATTGCTTGAACTTAGTAG+TGG 0.620795 8:-44036956 MsG0880044538.01.T01:three_prime_UTR
GTTTCGCCGTCTTGAAGCGG+AGG 0.624163 8:+44047499 None:intergenic
ACATTGGCTTATGACAAGAA+AGG 0.628779 8:+44041787 None:intergenic
AAGCAAGAGCGACCAAACGG+CGG 0.628783 8:+44047433 None:intergenic
CATACTAAAATAGGCTGCAG+GGG 0.630612 8:-44041895 MsG0880044538.01.T01:intron
GCAAAGCATCAGTCATGCAA+CGG 0.631386 8:+44047538 None:intergenic
GGATAAGAAATGTTGAATGG+TGG 0.633633 8:-44040580 MsG0880044538.01.T01:CDS
GTCAAAGAAGAAACCACGGC+GGG 0.634313 8:+44047401 None:intergenic
ATGGTTCGCAGTCACTGTAA+CGG 0.642051 8:-44047565 MsG0880044538.01.T01:intron
GAAATCTCTGATATTCACCA+AGG 0.643337 8:-44040186 MsG0880044538.01.T01:CDS
TGAATATCAGAGATTTCACT+CGG 0.646398 8:+44040192 None:intergenic
CAAACGGCGGCCATCCGCGG+TGG 0.649296 8:+44047446 None:intergenic
CGACGTCGATGATGATGACG+AGG 0.651106 8:-44047785 MsG0880044538.01.T01:CDS
TAGGACCAGGAAACTTCAGT+GGG 0.652021 8:-44037949 MsG0880044538.01.T01:CDS
ATACTGCAGATAGCAAGAGA+AGG 0.654967 8:-44038061 MsG0880044538.01.T01:intron
TGCTAACCATTCGGCCACCG+CGG 0.655643 8:-44047460 MsG0880044538.01.T01:CDS
AAATCTCTGATATTCACCAA+GGG 0.657871 8:-44040185 MsG0880044538.01.T01:CDS
AGAATGTTATTTGTAGTGAG+GGG 0.661742 8:-44038025 MsG0880044538.01.T01:CDS
TTAGGACCAGGAAACTTCAG+TGG 0.671815 8:-44037950 MsG0880044538.01.T01:CDS
ACGTTGGGCTGCTATGCGCG+GGG 0.672538 8:-44040498 MsG0880044538.01.T01:CDS
GCACCCCAAGTTCTCCACCC+TGG 0.673750 8:+44037186 None:intergenic
GCTTATCTTAAGTCCCGCCG+TGG 0.686431 8:-44047414 MsG0880044538.01.T01:CDS
AGAGGTCAAAGAAGAAACCA+CGG 0.688528 8:+44047397 None:intergenic
AATGAAGAACATCTTGACAA+GGG 0.692039 8:+44037084 None:intergenic
GTAACTATGAAAGACAACGT+TGG 0.705274 8:-44040514 MsG0880044538.01.T01:CDS
GTATAGGAAGAATAACAAAG+AGG 0.706312 8:+44047379 None:intergenic
ACAAGTGTTGATGTTGACAG+TGG 0.716658 8:+44037878 None:intergenic
TGTCACGCTTGAAACAACAG+AGG 0.721185 8:-44037858 MsG0880044538.01.T01:CDS
CTAGGTATTACTCACCAGGG+TGG 0.743606 8:-44037200 MsG0880044538.01.T01:CDS
GTGCTAGGTATTACTCACCA+GGG 0.750633 8:-44037203 MsG0880044538.01.T01:CDS
ACACGTTGTCGAAATCCCTG+TGG 0.758979 8:+44040539 None:intergenic
GGTCAAAGAAGAAACCACGG+CGG 0.787822 8:+44047400 None:intergenic
AGGACCAGGAAACTTCAGTG+GGG 0.816387 8:-44037948 MsG0880044538.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAATAAATAAATAATA+TGG - Chr8:44037380-44037399 MsG0880044538.01.T01:intron 0.0%
!!! TATATATAATTTTTTTTTTT+TGG - Chr8:44039033-44039052 MsG0880044538.01.T01:intron 0.0%
!!! TTTTAAAAAAAAAAAAAAAT+AGG + Chr8:44038981-44039000 None:intergenic 0.0%
!! AAAAAAAAAAAAAATTGGTA+AGG + Chr8:44044785-44044804 None:intergenic 10.0%
!! AAAAAAAAAAAAATTGGTAA+GGG + Chr8:44044784-44044803 None:intergenic 10.0%
!! AAACTAAAGTTAAAATTTAA+AGG + Chr8:44038343-44038362 None:intergenic 10.0%
!! ATAAAATAGACAAAAAAAAA+TGG + Chr8:44037285-44037304 None:intergenic 10.0%
!! GAATGTATAAATAAATAAAT+AGG + Chr8:44040275-44040294 None:intergenic 10.0%
!! GTTCAAAAAAAAAAAAAAAT+TGG + Chr8:44044790-44044809 None:intergenic 10.0%
!! TACTAAATATATGTTATAAA+TGG + Chr8:44041242-44041261 None:intergenic 10.0%
!! TATAAATTATATCATTATGT+TGG + Chr8:44038211-44038230 None:intergenic 10.0%
!! TTAATCATATGAAAAAAATA+TGG - Chr8:44038073-44038092 MsG0880044538.01.T01:intron 10.0%
!! TTCAAATATCTTATAAAAAA+TGG - Chr8:44039863-44039882 MsG0880044538.01.T01:intron 10.0%
!!! AAATTTAAAGGTTTTTTTAA+AGG + Chr8:44038331-44038350 None:intergenic 10.0%
!!! AATTTAAAGGTTTTTTTAAA+GGG + Chr8:44038330-44038349 None:intergenic 10.0%
!!! ATATAATTTTTTTTTTTTGG+TGG - Chr8:44039036-44039055 MsG0880044538.01.T01:intron 10.0%
!!! ATTTTATTTTATATGAAAGA+TGG - Chr8:44039836-44039855 MsG0880044538.01.T01:intron 10.0%
!!! TATAATTTTTTTTTTTTGGT+GGG - Chr8:44039037-44039056 MsG0880044538.01.T01:intron 10.0%
!!! TTTAACTTTAGTTTTTTTTT+GGG - Chr8:44038349-44038368 MsG0880044538.01.T01:intron 10.0%
!!! TTTTAACTTTAGTTTTTTTT+TGG - Chr8:44038348-44038367 MsG0880044538.01.T01:intron 10.0%
!! AAAAAAAAAAAATAGGTTAG+TGG + Chr8:44038974-44038993 None:intergenic 15.0%
!! AAATGTAATAGATTATTGAT+AGG - Chr8:44038634-44038653 MsG0880044538.01.T01:intron 15.0%
!! AAATTAAAAATTATGTTACC+TGG + Chr8:44042660-44042679 None:intergenic 15.0%
!! AATATCTTATAAAAAATGGA+CGG - Chr8:44039867-44039886 MsG0880044538.01.T01:intron 15.0%
!! AATTGATATTAGAATTTCAT+TGG - Chr8:44045049-44045068 MsG0880044538.01.T01:intron 15.0%
!! ACATAAAACAAATTAAGTAT+AGG + Chr8:44038116-44038135 None:intergenic 15.0%
!! ACATATATATTATTAACATC+TGG - Chr8:44039945-44039964 MsG0880044538.01.T01:intron 15.0%
!! ACTTAAATAATGAATTATCA+AGG - Chr8:44040314-44040333 MsG0880044538.01.T01:intron 15.0%
!! ATAGTATAGGAAAAAAAATA+GGG - Chr8:44038657-44038676 MsG0880044538.01.T01:intron 15.0%
!! ATCATTTCTCAAAAAAATAT+TGG - Chr8:44038864-44038883 MsG0880044538.01.T01:intron 15.0%
!! ATGATTAACTAAATATAGTA+GGG + Chr8:44038042-44038061 None:intergenic 15.0%
!! GGAAAATTAAAATTAAAAGT+CGG + Chr8:44038309-44038328 None:intergenic 15.0%
!! TAAAATATAAACACAACTTT+AGG - Chr8:44046106-44046125 MsG0880044538.01.T01:intron 15.0%
!! TAAATAGTTAAGGATATAAT+AGG + Chr8:44043196-44043215 None:intergenic 15.0%
!! TAATTATAGGTAACAAATAA+TGG - Chr8:44039479-44039498 MsG0880044538.01.T01:intron 15.0%
!! TATGATTAACTAAATATAGT+AGG + Chr8:44038043-44038062 None:intergenic 15.0%
!! TGAAATCATATATTCAATAA+TGG + Chr8:44039808-44039827 None:intergenic 15.0%
!! TTAATTCCTTAAATAATCTA+TGG - Chr8:44046195-44046214 MsG0880044538.01.T01:intron 15.0%
!! TTTCTTAATCTATAATAAAG+AGG + Chr8:44040647-44040666 None:intergenic 15.0%
!!! AAAACCAAATAAAAATGTTT+TGG - Chr8:44040686-44040705 MsG0880044538.01.T01:intron 15.0%
!!! AAATTTGTACTGATATTTTT+GGG + Chr8:44039507-44039526 None:intergenic 15.0%
!!! AATATTATCCTATCTAAAAT+AGG + Chr8:44040585-44040604 None:intergenic 15.0%
!!! ACATATATTTAGTATCTTTT+TGG - Chr8:44041248-44041267 MsG0880044538.01.T01:intron 15.0%
!!! AGTAAATTGATATGTAATTT+TGG - Chr8:44039986-44040005 MsG0880044538.01.T01:intron 15.0%
!!! ATAATTTTTTTTTTTTGGTG+GGG - Chr8:44039038-44039057 MsG0880044538.01.T01:intron 15.0%
!!! ATATTTTTGTATTTTGCTTT+TGG + Chr8:44040437-44040456 None:intergenic 15.0%
!!! ATTTTATTAAATCAAATGGA+AGG + Chr8:44047296-44047315 None:intergenic 15.0%
!!! GATCATTTTATTAAATCAAA+TGG + Chr8:44047300-44047319 None:intergenic 15.0%
!!! GGAATATATTGTTATAATTT+TGG + Chr8:44038021-44038040 None:intergenic 15.0%
!!! GTATATGTTTATTACTATTT+TGG - Chr8:44047712-44047731 MsG0880044538.01.T01:intron 15.0%
!!! TAAAGTTGTGTTTATATTTT+AGG + Chr8:44046107-44046126 None:intergenic 15.0%
!!! TACCTTTTTATGTTAATTAA+AGG - Chr8:44040361-44040380 MsG0880044538.01.T01:intron 15.0%
!!! TATAAACTTCTTTTAATTTG+TGG - Chr8:44043398-44043417 MsG0880044538.01.T01:intron 15.0%
!!! TATTTTAGATAGGATAATAT+TGG - Chr8:44040584-44040603 MsG0880044538.01.T01:CDS 15.0%
!!! TCTAAAAAGTTTAGTTTTTA+GGG + Chr8:44045889-44045908 None:intergenic 15.0%
!!! TTCTAAAAAGTTTAGTTTTT+AGG + Chr8:44045890-44045909 None:intergenic 15.0%
!!! TTTTATTTTATCTAAGTCTT+TGG - Chr8:44040799-44040818 MsG0880044538.01.T01:intron 15.0%
!!! TTTTTGTCCATTATTTTTTT+TGG - Chr8:44039615-44039634 MsG0880044538.01.T01:intron 15.0%
!! AAAACAAGAAAATAAATGAC+AGG - Chr8:44045423-44045442 MsG0880044538.01.T01:intron 20.0%
!! AAATGTAATTAATATTGTGC+GGG + Chr8:44043307-44043326 None:intergenic 20.0%
!! AAGAAAATATAATCTAGGTA+GGG + Chr8:44039172-44039191 None:intergenic 20.0%
!! AGGTAAGATATTAAACAATT+AGG + Chr8:44037475-44037494 None:intergenic 20.0%
!! AGTGAAATAATAATTTGGTA+AGG + Chr8:44044817-44044836 None:intergenic 20.0%
!! ATAAATTTACAAAGAAAGTG+AGG - Chr8:44038726-44038745 MsG0880044538.01.T01:intron 20.0%
!! ATCACAAGAAAATATAATCT+AGG + Chr8:44039177-44039196 None:intergenic 20.0%
!! ATTGTCCTTAATAAATGATA+TGG + Chr8:44043256-44043275 None:intergenic 20.0%
!! CAAAGAGTGAAATAATAATT+TGG + Chr8:44044822-44044841 None:intergenic 20.0%
!! CAAATAAATTCGAAAGTAAA+CGG + Chr8:44047239-44047258 None:intergenic 20.0%
!! CTCCTTTAATTAACATAAAA+AGG + Chr8:44040366-44040385 None:intergenic 20.0%
!! CTTCTATAAGTTTATGATTT+GGG - Chr8:44037847-44037866 MsG0880044538.01.T01:CDS 20.0%
!! GAAATGTAATTAATATTGTG+CGG + Chr8:44043308-44043327 None:intergenic 20.0%
!! GATAGTATAGGAAAAAAAAT+AGG - Chr8:44038656-44038675 MsG0880044538.01.T01:intron 20.0%
!! GATATGATAATATTGTATTC+AGG - Chr8:44044351-44044370 MsG0880044538.01.T01:intron 20.0%
!! GTCAATTAAAATAATTGTCA+AGG - Chr8:44045114-44045133 MsG0880044538.01.T01:intron 20.0%
!! TAAAAATTCAATTGAAGATC+CGG - Chr8:44046942-44046961 MsG0880044538.01.T01:intron 20.0%
!! TAATTTGATAAAATCAACCA+CGG - Chr8:44047058-44047077 MsG0880044538.01.T01:intron 20.0%
!! TGGTCTTTATTAAATTATCA+TGG + Chr8:44043540-44043559 None:intergenic 20.0%
!! TTAAACAAAAGTAAATGGAA+TGG - Chr8:44041678-44041697 MsG0880044538.01.T01:CDS 20.0%
!! TTAATCTATAATAAAGAGGT+GGG + Chr8:44040643-44040662 None:intergenic 20.0%
!! TTATTTGCAAGCTAAAATTA+AGG - Chr8:44037344-44037363 MsG0880044538.01.T01:intron 20.0%
!! TTCAAAACAACATAAATGTT+AGG - Chr8:44047358-44047377 MsG0880044538.01.T01:intron 20.0%
!! TTCTATAAGTTTATGATTTG+GGG - Chr8:44037848-44037867 MsG0880044538.01.T01:CDS 20.0%
!! TTGTCCTTAATAAATGATAT+GGG + Chr8:44043255-44043274 None:intergenic 20.0%
!! TTTCTCAAAAAAATATTGGT+AGG - Chr8:44038868-44038887 MsG0880044538.01.T01:intron 20.0%
!!! AACTAAACTTTTTAGAATGA+CGG - Chr8:44045893-44045912 MsG0880044538.01.T01:intron 20.0%
!!! AACTATACTATTTTTACCTA+CGG + Chr8:44040722-44040741 None:intergenic 20.0%
!!! AAGTTTGTTGAATAAAGATA+TGG - Chr8:44042864-44042883 MsG0880044538.01.T01:intron 20.0%
!!! AATTTGTACTGATATTTTTG+GGG + Chr8:44039506-44039525 None:intergenic 20.0%
!!! ACATTTATGTTGTTTTGAAA+TGG + Chr8:44047357-44047376 None:intergenic 20.0%
!!! ACTTTTTTTGTGAACTATTT+TGG + Chr8:44041024-44041043 None:intergenic 20.0%
!!! AGATCCAAAACATTTTTATT+TGG + Chr8:44040693-44040712 None:intergenic 20.0%
!!! AGATGGTTTTTATAATATAG+AGG - Chr8:44037896-44037915 MsG0880044538.01.T01:CDS 20.0%
!!! CAAATTTGTACTGATATTTT+TGG + Chr8:44039508-44039527 None:intergenic 20.0%
!!! CTTTTTCTTGTTTACAAAAA+AGG - Chr8:44040391-44040410 MsG0880044538.01.T01:intron 20.0%
!!! TAGATAGTGTTTTAAAGTTA+TGG - Chr8:44046898-44046917 MsG0880044538.01.T01:intron 20.0%
!!! TTCAATTTATTTTATGTGTG+AGG + Chr8:44041819-44041838 None:intergenic 20.0%
!!! TTGAAACAAAATCTAAAACA+AGG + Chr8:44044666-44044685 None:intergenic 20.0%
!!! TTGGATTTTGATTATCAATA+AGG - Chr8:44040818-44040837 MsG0880044538.01.T01:intron 20.0%
!!! TTTAACCATATTTAGTTCTA+GGG + Chr8:44047142-44047161 None:intergenic 20.0%
!!! TTTGTTATTGAAAATTGTGT+TGG + Chr8:44042534-44042553 None:intergenic 20.0%
! AAAATACGCAATCATGTTAA+GGG + Chr8:44040214-44040233 None:intergenic 25.0%
! AAAATCGCAATCAAAATTGA+TGG + Chr8:44041280-44041299 None:intergenic 25.0%
! AAAGTAACATTAATGCTTCA+TGG + Chr8:44043172-44043191 None:intergenic 25.0%
! AACAAAAACTTATCGTTGAA+AGG + Chr8:44037684-44037703 None:intergenic 25.0%
! AAGCGTTAAACAAAAGTAAA+TGG - Chr8:44041673-44041692 MsG0880044538.01.T01:CDS 25.0%
! AAGTAACATTAATGCTTCAT+GGG + Chr8:44043171-44043190 None:intergenic 25.0%
! AAGTCAAAATCATCTTGATT+AGG + Chr8:44047606-44047625 None:intergenic 25.0%
! AATGTAAGAAAGTGACAATA+TGG + Chr8:44046404-44046423 None:intergenic 25.0%
! ACAAACAGAATATTGCATAA+AGG + Chr8:44037495-44037514 None:intergenic 25.0%
! ACAAATAACATTCTTTGAAC+TGG + Chr8:44046584-44046603 None:intergenic 25.0%
! ACAAATCAAGAGAAATATGT+AGG - Chr8:44047685-44047704 MsG0880044538.01.T01:intron 25.0%
! ACACATCTCTTAAAACATTT+AGG - Chr8:44042264-44042283 MsG0880044538.01.T01:intron 25.0%
! ACATAACCCATTATAGTTAT+AGG - Chr8:44045220-44045239 MsG0880044538.01.T01:intron 25.0%
! ACGATTCATATTCAATTTAG+TGG - Chr8:44043498-44043517 MsG0880044538.01.T01:intron 25.0%
! ACTGAAACAAAAAAAAACCT+TGG - Chr8:44043568-44043587 MsG0880044538.01.T01:intron 25.0%
! AGTTCATCATTGTTGAAAAA+TGG + Chr8:44044487-44044506 None:intergenic 25.0%
! ATCTTAATGCAATGAGTTTA+TGG - Chr8:44041980-44041999 MsG0880044538.01.T01:intron 25.0%
! ATGACACCTATAACTATAAT+GGG + Chr8:44045229-44045248 None:intergenic 25.0%
! ATGACTCAAATCTAACATAA+GGG - Chr8:44044316-44044335 MsG0880044538.01.T01:intron 25.0%
! ATGCATGAAATGAAGAATTA+AGG + Chr8:44042703-44042722 None:intergenic 25.0%
! ATGGCTGTACAAAAAATAAA+GGG - Chr8:44042437-44042456 MsG0880044538.01.T01:intron 25.0%
! ATTTGAATTAAATTGAACCG+TGG + Chr8:44047078-44047097 None:intergenic 25.0%
! CAAATAACATTCTTTGAACT+GGG + Chr8:44046583-44046602 None:intergenic 25.0%
! CAAGAAAATATAATCTAGGT+AGG + Chr8:44039173-44039192 None:intergenic 25.0%
! CAAGCTAAAATTAAGGTTAA+GGG - Chr8:44037351-44037370 MsG0880044538.01.T01:intron 25.0%
! CATTTCATGCATACTAAAAT+AGG - Chr8:44042711-44042730 MsG0880044538.01.T01:intron 25.0%
! CCAAATCATAAACTTATAGA+AGG + Chr8:44037849-44037868 None:intergenic 25.0%
! CCAATAAAATCATGAGTTTA+AGG + Chr8:44046973-44046992 None:intergenic 25.0%
! CCTTCTATAAGTTTATGATT+TGG - Chr8:44037846-44037865 MsG0880044538.01.T01:CDS 25.0%
! CTTAATCTATAATAAAGAGG+TGG + Chr8:44040644-44040663 None:intergenic 25.0%
! GAGCAATGTTATAAAACAAA+TGG - Chr8:44042790-44042809 MsG0880044538.01.T01:intron 25.0%
! GATTATTGATAGGATAGTAT+AGG - Chr8:44038644-44038663 MsG0880044538.01.T01:intron 25.0%
! GGATTCTACTATGTTATAAA+TGG + Chr8:44041132-44041151 None:intergenic 25.0%
! GTCACAAAAGTTGTTAAAAA+TGG - Chr8:44038829-44038848 MsG0880044538.01.T01:intron 25.0%
! GTTTCCCATATCATTTATTA+AGG - Chr8:44043248-44043267 MsG0880044538.01.T01:intron 25.0%
! GTTTCTATAGTTCATAGAAT+TGG + Chr8:44042589-44042608 None:intergenic 25.0%
! TAAAATTAAGGTTAAGGGAT+TGG - Chr8:44037356-44037375 MsG0880044538.01.T01:intron 25.0%
! TACAAAAACGACAAGTAAAA+AGG - Chr8:44044924-44044943 MsG0880044538.01.T01:intron 25.0%
! TCAAAAACAGGTAATACAAA+GGG + Chr8:44039345-44039364 None:intergenic 25.0%
! TCAAATTCATCAACAAATGT+TGG - Chr8:44047768-44047787 MsG0880044538.01.T01:CDS 25.0%
! TCAATTATGGAGCTTATAAA+TGG - Chr8:44042950-44042969 MsG0880044538.01.T01:intron 25.0%
! TCGAAAGCCAAAAAAAATAA+TGG + Chr8:44039625-44039644 None:intergenic 25.0%
! TGAAAAATTGATCGCTAAAT+CGG - Chr8:44043897-44043916 MsG0880044538.01.T01:intron 25.0%
! TGAGAACAATATGTGAATTT+GGG - Chr8:44047627-44047646 MsG0880044538.01.T01:intron 25.0%
! TGCTATAAAGTGAATTATTC+AGG - Chr8:44043857-44043876 MsG0880044538.01.T01:intron 25.0%
! TGTTATAAAACAAATGGTTG+TGG - Chr8:44042796-44042815 MsG0880044538.01.T01:intron 25.0%
! TTGAGAACAATATGTGAATT+TGG - Chr8:44047626-44047645 MsG0880044538.01.T01:intron 25.0%
!! AAAAATAGGGTTGTGTTATT+TGG - Chr8:44038670-44038689 MsG0880044538.01.T01:intron 25.0%
!! AAAGAATGTTATTTGTAGTG+AGG - Chr8:44046588-44046607 MsG0880044538.01.T01:intron 25.0%
!! AACTCATTGCATTAAGATTT+TGG + Chr8:44041978-44041997 None:intergenic 25.0%
!! AAGAATGTTATTTGTAGTGA+GGG - Chr8:44046589-44046608 MsG0880044538.01.T01:intron 25.0%
!! ACTCATTGCATTAAGATTTT+GGG + Chr8:44041977-44041996 None:intergenic 25.0%
!! ATACCATCTTTGTTTAGATT+TGG - Chr8:44044195-44044214 MsG0880044538.01.T01:intron 25.0%
!! CATACTGAGTGATAAATTTT+GGG + Chr8:44040129-44040148 None:intergenic 25.0%
!! CCTTAAACTCATGATTTTAT+TGG - Chr8:44046970-44046989 MsG0880044538.01.T01:intron 25.0%
!! CTAAATGTAATTTTGTGACA+AGG + Chr8:44038245-44038264 None:intergenic 25.0%
!! TAAAGATGTTCCTACATTTT+AGG + Chr8:44046056-44046075 None:intergenic 25.0%
!! TAACGATTGATTTAGAAAGT+CGG - Chr8:44043931-44043950 MsG0880044538.01.T01:intron 25.0%
!! TCTATAAGTTTATGATTTGG+GGG - Chr8:44037849-44037868 MsG0880044538.01.T01:CDS 25.0%
!! TGAAATCCAAATGAAGTTTT+TGG - Chr8:44041614-44041633 MsG0880044538.01.T01:intron 25.0%
!!! AAATTACCTTTTTTCCATGT+AGG + Chr8:44038554-44038573 None:intergenic 25.0%
!!! AATAACTGTTAAGAGTATTG+TGG - Chr8:44044843-44044862 MsG0880044538.01.T01:intron 25.0%
!!! AATTACCTTTTTTCCATGTA+GGG + Chr8:44038553-44038572 None:intergenic 25.0%
!!! ATTTTTTTTAACTCGATACC+CGG - Chr8:44044543-44044562 MsG0880044538.01.T01:CDS 25.0%
!!! CATGATTTTATTGGTTCAAT+CGG - Chr8:44046979-44046998 MsG0880044538.01.T01:intron 25.0%
!!! CGATGGATTTTGTTTATTTT+GGG + Chr8:44041165-44041184 None:intergenic 25.0%
!!! GATTTAATTTTTTTCCACCA+AGG + Chr8:44043588-44043607 None:intergenic 25.0%
!!! GATTTTGATTTCTCAAAAAC+AGG + Chr8:44039357-44039376 None:intergenic 25.0%
!!! GTTGTTTGGTTTTGTTTTTT+TGG + Chr8:44041645-44041664 None:intergenic 25.0%
!!! GTTTAACCATATTTAGTTCT+AGG + Chr8:44047143-44047162 None:intergenic 25.0%
!!! TCGATGGATTTTGTTTATTT+TGG + Chr8:44041166-44041185 None:intergenic 25.0%
!!! TCTGTTTGTTTGTTTTTGTT+GGG - Chr8:44037506-44037525 MsG0880044538.01.T01:intron 25.0%
!!! TTCTGTTTGTTTGTTTTTGT+TGG - Chr8:44037505-44037524 MsG0880044538.01.T01:intron 25.0%
!!! TTTATTTTGGGATTCTACTA+TGG + Chr8:44041153-44041172 None:intergenic 25.0%
!!! TTTTGTTTCAGTGCTAAATA+TGG + Chr8:44043560-44043579 None:intergenic 25.0%
!!! TTTTTTTTCCTCTTTCATCA+AGG + Chr8:44037713-44037732 None:intergenic 25.0%
!!! TTTTTTTTCCTTGATGAAAG+AGG - Chr8:44037702-44037721 MsG0880044538.01.T01:intron 25.0%
AAATCATCTTGATTAGGCTT+TGG + Chr8:44047600-44047619 None:intergenic 30.0%
AAATCTCTGATATTCACCAA+GGG - Chr8:44044430-44044449 MsG0880044538.01.T01:CDS 30.0%
AATATCCATGTATGTGTTGT+TGG + Chr8:44046329-44046348 None:intergenic 30.0%
AATATCGCAATCAAAATCGA+TGG + Chr8:44041182-44041201 None:intergenic 30.0%
AATGAAGAACATCTTGACAA+GGG + Chr8:44047534-44047553 None:intergenic 30.0%
AATGACACACGAATAATATG+TGG - Chr8:44042094-44042113 MsG0880044538.01.T01:intron 30.0%
AATGGATAACCAAATTGCTT+GGG + Chr8:44039790-44039809 None:intergenic 30.0%
AATTATCCATTGTATGTACG+TGG + Chr8:44044629-44044648 None:intergenic 30.0%
AATTGACCTTCTATATTCAC+CGG + Chr8:44036870-44036889 None:intergenic 30.0%
ACAAACCCTAGAACTAAATA+TGG - Chr8:44047134-44047153 MsG0880044538.01.T01:intron 30.0%
ACAAGAATCAGAGACAAATA+TGG - Chr8:44046025-44046044 MsG0880044538.01.T01:intron 30.0%
ACCATATGAAAAATAGCACA+TGG + Chr8:44037822-44037841 None:intergenic 30.0%
ACTAGAATACATGTGTTCTT+AGG - Chr8:44043446-44043465 MsG0880044538.01.T01:intron 30.0%
AGGATTCAAATTCCAAACAA+TGG + Chr8:44047276-44047295 None:intergenic 30.0%
AGGTTGAAATCAATATGGAT+AGG + Chr8:44045596-44045615 None:intergenic 30.0%
AGTACTCAAGTTATGTAACT+TGG + Chr8:44040970-44040989 None:intergenic 30.0%
AGTTTGATTGTAAGAGAAAG+AGG - Chr8:44046834-44046853 MsG0880044538.01.T01:intron 30.0%
ATAAGGAAGTTCCTTACATT+AGG - Chr8:44040835-44040854 MsG0880044538.01.T01:intron 30.0%
ATCAACAAATGTTGGATCAT+TGG - Chr8:44047776-44047795 MsG0880044538.01.T01:CDS 30.0%
ATCCGACTAATCTAAATTGA+AGG - Chr8:44044572-44044591 MsG0880044538.01.T01:CDS 30.0%
CAAAATACGCAATCATGTTA+AGG + Chr8:44040215-44040234 None:intergenic 30.0%
CAAGAAAGGCTCATAATAAA+AGG - Chr8:44045811-44045830 MsG0880044538.01.T01:intron 30.0%
CATGAAATGAAGAATTAAGG+TGG + Chr8:44042700-44042719 None:intergenic 30.0%
CATGACACCTATAACTATAA+TGG + Chr8:44045230-44045249 None:intergenic 30.0%
CATGACTCAAATCTAACATA+AGG - Chr8:44044315-44044334 MsG0880044538.01.T01:intron 30.0%
CATGGCTGTACAAAAAATAA+AGG - Chr8:44042436-44042455 MsG0880044538.01.T01:intron 30.0%
CTATAGTTCATAGAATTGGA+TGG + Chr8:44042585-44042604 None:intergenic 30.0%
CTCAAAAACAGGTAATACAA+AGG + Chr8:44039346-44039365 None:intergenic 30.0%
CTCGATAAAATCAAACCTAA+AGG - Chr8:44041546-44041565 MsG0880044538.01.T01:intron 30.0%
CTTGTACTTCCATAATACAT+TGG + Chr8:44042847-44042866 None:intergenic 30.0%
GAAACAAAAAAAAACCTTGG+TGG - Chr8:44043571-44043590 MsG0880044538.01.T01:intron 30.0%
GAAAGAATTGAAAGAAGAGA+GGG + Chr8:44043222-44043241 None:intergenic 30.0%
GAAATCGTAAGATTTAAGTC+AGG + Chr8:44041080-44041099 None:intergenic 30.0%
GAATAAAGATATGGCAAGAA+TGG - Chr8:44042873-44042892 MsG0880044538.01.T01:intron 30.0%
GACGGTTTGAATAATCAATT+AGG - Chr8:44045911-44045930 MsG0880044538.01.T01:intron 30.0%
GAGAGGGTAATAAATAGTTA+AGG + Chr8:44043206-44043225 None:intergenic 30.0%
GATTCAAATTCCAAACAATG+GGG + Chr8:44047274-44047293 None:intergenic 30.0%
GATTGTGAAGGTTAAGAATT+AGG + Chr8:44043812-44043831 None:intergenic 30.0%
GCAAGCTAAAATTAAGGTTA+AGG - Chr8:44037350-44037369 MsG0880044538.01.T01:intron 30.0%
GGATTCAAATTCCAAACAAT+GGG + Chr8:44047275-44047294 None:intergenic 30.0%
GTAAGAAACAATGATTGTGA+AGG + Chr8:44043824-44043843 None:intergenic 30.0%
GTATAGGAAGAATAACAAAG+AGG + Chr8:44037239-44037258 None:intergenic 30.0%
GTTAAGGTCTATTGTTCATA+GGG - Chr8:44044250-44044269 MsG0880044538.01.T01:intron 30.0%
GTTATGCCAAAAACTTCATT+TGG + Chr8:44041623-44041642 None:intergenic 30.0%
GTTCATGAACAATGGAATAA+AGG - Chr8:44038890-44038909 MsG0880044538.01.T01:intron 30.0%
GTTGAAAAATGGAGTTTAGT+AGG + Chr8:44044476-44044495 None:intergenic 30.0%
TAACTATGAAAGACAACGTT+GGG - Chr8:44044102-44044121 MsG0880044538.01.T01:intron 30.0%
TAAGCATATGTATGAAACCA+AGG + Chr8:44043071-44043090 None:intergenic 30.0%
TATCTTTACAGAATCAGTTG+TGG + Chr8:44046138-44046157 None:intergenic 30.0%
TATGGAAAGTCCTAAAATGT+AGG - Chr8:44046043-44046062 MsG0880044538.01.T01:intron 30.0%
TATTCTTAGAAGAAAGCTCA+CGG - Chr8:44039272-44039291 MsG0880044538.01.T01:intron 30.0%
TCACCAAATCTAAACAAAGA+TGG + Chr8:44044201-44044220 None:intergenic 30.0%
TCATCCATATGTTGAAACAA+TGG + Chr8:44044379-44044398 None:intergenic 30.0%
TCCAAAGCGACATATAATTT+GGG + Chr8:44043110-44043129 None:intergenic 30.0%
TCCATGTCAATTATGAAGTT+TGG - Chr8:44037642-44037661 MsG0880044538.01.T01:intron 30.0%
TCCCTTCAATTTAGATTAGT+CGG + Chr8:44044577-44044596 None:intergenic 30.0%
TCCGACTAATCTAAATTGAA+GGG - Chr8:44044573-44044592 MsG0880044538.01.T01:CDS 30.0%
TCTCAAGCAATTTGATGTTA+AGG - Chr8:44044234-44044253 MsG0880044538.01.T01:intron 30.0%
TGAAAGAATTGAAAGAAGAG+AGG + Chr8:44043223-44043242 None:intergenic 30.0%
TGAATATCAGAGATTTCACT+CGG + Chr8:44044426-44044445 None:intergenic 30.0%
TGAGGATAAGAAATGTTGAA+TGG - Chr8:44044032-44044051 MsG0880044538.01.T01:intron 30.0%
TGTCATAAGCCAATGTATTA+TGG - Chr8:44042835-44042854 MsG0880044538.01.T01:intron 30.0%
TGTTAAGGTCTATTGTTCAT+AGG - Chr8:44044249-44044268 MsG0880044538.01.T01:intron 30.0%
TGTTTCGAAAAATTGACGAA+TGG - Chr8:44040495-44040514 MsG0880044538.01.T01:CDS 30.0%
TTCCAAAGCGACATATAATT+TGG + Chr8:44043111-44043130 None:intergenic 30.0%
TTCGAAAGTAAACGGTTTAA+AGG + Chr8:44047231-44047250 None:intergenic 30.0%
TTGTCAAGATGTTCTTCATT+GGG - Chr8:44047534-44047553 MsG0880044538.01.T01:CDS 30.0%
TTTAAATAGTAACTAGAGCG+TGG - Chr8:44047820-44047839 MsG0880044538.01.T01:CDS 30.0%
TTTAACTAACCGCAAAGTAT+TGG - Chr8:44037922-44037941 MsG0880044538.01.T01:CDS 30.0%
TTTGATGTCATAAGCACTTT+CGG - Chr8:44043679-44043698 MsG0880044538.01.T01:intron 30.0%
! AAACAACAATTTGAGACGAT+AGG - Chr8:44037731-44037750 MsG0880044538.01.T01:intron 30.0%
! ACGTGTTGGAATTTGAAATT+TGG + Chr8:44042497-44042516 None:intergenic 30.0%
! ACTTACATTTGCTAACCATT+CGG - Chr8:44037146-44037165 MsG0880044538.01.T01:CDS 30.0%
! AGAATGTTATTTGTAGTGAG+GGG - Chr8:44046590-44046609 MsG0880044538.01.T01:intron 30.0%
! ATTTTCATCAGATTGTGCTT+TGG - Chr8:44040019-44040038 MsG0880044538.01.T01:intron 30.0%
! GCATACTGAGTGATAAATTT+TGG + Chr8:44040130-44040149 None:intergenic 30.0%
! GGAAATATTTGTAGCTGTTT+TGG + Chr8:44046086-44046105 None:intergenic 30.0%
! TAAACCTTCAGGAAGATTTT+TGG + Chr8:44044161-44044180 None:intergenic 30.0%
! TAATGGATAACCAAATTGCT+TGG + Chr8:44039791-44039810 None:intergenic 30.0%
! TATGTTGATTGGAAACATCA+AGG - Chr8:44043780-44043799 MsG0880044538.01.T01:intron 30.0%
! TCCTATCTAAAATAGGTTGA+TGG + Chr8:44040578-44040597 None:intergenic 30.0%
! TGAGTAAAATCCTTCGATTT+TGG - Chr8:44041332-44041351 MsG0880044538.01.T01:intron 30.0%
! TTCCTAGGTTGAAATCAATA+TGG + Chr8:44045601-44045620 None:intergenic 30.0%
! TTGGAATTTGAAATTTGGTG+CGG + Chr8:44042492-44042511 None:intergenic 30.0%
! TTTTCATCAGATTGTGCTTT+GGG - Chr8:44040020-44040039 MsG0880044538.01.T01:intron 30.0%
!! AAAATAGGTTGATGGTAAAG+TGG + Chr8:44040570-44040589 None:intergenic 30.0%
!! ACCATCAACCTATTTTAGAT+AGG - Chr8:44040574-44040593 MsG0880044538.01.T01:CDS 30.0%
!! ATCCATATTGATTTCAACCT+AGG - Chr8:44045596-44045615 MsG0880044538.01.T01:intron 30.0%
!! GATAAATTTTGGGAAGGTAT+TGG + Chr8:44040119-44040138 None:intergenic 30.0%
!! GTGTTATTTGGACAACTATT+TGG - Chr8:44038682-44038701 MsG0880044538.01.T01:intron 30.0%
!! TCCATTTTTCTATTCGATGT+GGG - Chr8:44042030-44042049 MsG0880044538.01.T01:intron 30.0%
!! TTGGGGTTTTTCAATTTAAG+AGG + Chr8:44042469-44042488 None:intergenic 30.0%
!! TTTTGTTTGCTTCTACTTGA+AGG - Chr8:44039223-44039242 MsG0880044538.01.T01:intron 30.0%
!!! ATTTTTTGTACAGCCATGTT+TGG + Chr8:44042434-44042453 None:intergenic 30.0%
!!! ATTTTTTTTGGCTTTCGAAC+CGG - Chr8:44039627-44039646 MsG0880044538.01.T01:intron 30.0%
!!! CTTGGTTGCTTATTGTTTTT+TGG + Chr8:44042628-44042647 None:intergenic 30.0%
!!! GGAAAAGTACTTTTTCTAGT+CGG + Chr8:44043002-44043021 None:intergenic 30.0%
!!! GTGCTATTTTTCATATGGTA+TGG - Chr8:44037823-44037842 MsG0880044538.01.T01:CDS 30.0%
!!! TCCATGTGCTATTTTTCATA+TGG - Chr8:44037818-44037837 MsG0880044538.01.T01:CDS 30.0%
!!! TTTTTTCTTGTTGTACGTGT+TGG + Chr8:44042511-44042530 None:intergenic 30.0%
AAAATCGCAACCAAAATCGA+AGG + Chr8:44041345-44041364 None:intergenic 35.0%
AAACTACATCAAAAAACCCC+TGG - Chr8:44042123-44042142 MsG0880044538.01.T01:intron 35.0%
AAACTCCTCGTTTACACTAA+AGG - Chr8:44045563-44045582 MsG0880044538.01.T01:intron 35.0%
AAGCGACATATAATTTGGGA+CGG + Chr8:44043106-44043125 None:intergenic 35.0%
AATCAATATGGATAGGTCCT+AGG + Chr8:44045589-44045608 None:intergenic 35.0%
ACAATATGTGAATTTGGGTG+TGG - Chr8:44047632-44047651 MsG0880044538.01.T01:intron 35.0%
ACACATACATGAATCACTGA+TGG + Chr8:44037016-44037035 None:intergenic 35.0%
AGATTCACACACTATAAGTG+TGG + Chr8:44038949-44038968 None:intergenic 35.0%
AGGGGTTGTGATTGATTATA+GGG + Chr8:44045652-44045671 None:intergenic 35.0%
AGTATGTGACACAACATTTC+AGG - Chr8:44046807-44046826 MsG0880044538.01.T01:intron 35.0%
AGTCCTGATCACTTCAATTA+TGG - Chr8:44042937-44042956 MsG0880044538.01.T01:intron 35.0%
ATACGTCATACAATTTGGGA+CGG - Chr8:44043349-44043368 MsG0880044538.01.T01:intron 35.0%
ATGACCAAAAATCTTCCTGA+AGG - Chr8:44044154-44044173 MsG0880044538.01.T01:intron 35.0%
ATGTAGAGAAGAGGTTATGT+TGG + Chr8:44040890-44040909 None:intergenic 35.0%
ATGTCTCTTCTTAAACCTTC+AGG + Chr8:44044172-44044191 None:intergenic 35.0%
ATTAGGGATATGTAGAGAAG+AGG + Chr8:44040899-44040918 None:intergenic 35.0%
ATTGGTAGGTTCATGAACAA+TGG - Chr8:44038882-44038901 MsG0880044538.01.T01:intron 35.0%
CAAACATTCCTCGACTAATT+AGG + Chr8:44045293-44045312 None:intergenic 35.0%
CAAATCTGTATCAAGCTTTG+TGG + Chr8:44039427-44039446 None:intergenic 35.0%
CAATGAAGAACATCTTGACA+AGG + Chr8:44047535-44047554 None:intergenic 35.0%
CACATCGAATAGAAAAATGG+AGG + Chr8:44042031-44042050 None:intergenic 35.0%
CATAACTTGAGTACTCGTTT+AGG - Chr8:44040975-44040994 MsG0880044538.01.T01:intron 35.0%
CATTTGTAGCAATTCATTCG+TGG - Chr8:44039536-44039555 MsG0880044538.01.T01:intron 35.0%
CCCAAATTGTATGACGTATT+GGG + Chr8:44043348-44043367 None:intergenic 35.0%
CCCAATACGTCATACAATTT+GGG - Chr8:44043345-44043364 MsG0880044538.01.T01:intron 35.0%
CGAATGAATTGCTACAAATG+TGG + Chr8:44039536-44039555 None:intergenic 35.0%
CTTGTCAAGATGTTCTTCAT+TGG - Chr8:44047533-44047552 MsG0880044538.01.T01:CDS 35.0%
GAAATCTCTGATATTCACCA+AGG - Chr8:44044429-44044448 MsG0880044538.01.T01:CDS 35.0%
GAAGTTTGGCACGTTATATA+CGG - Chr8:44037656-44037675 MsG0880044538.01.T01:intron 35.0%
GAATTGCTTGAACTTAGTAG+TGG - Chr8:44047659-44047678 MsG0880044538.01.T01:intron 35.0%
GCCAAACTTCATAATTGACA+TGG + Chr8:44037646-44037665 None:intergenic 35.0%
GCGGACATTATTATTGATGA+TGG - Chr8:44037775-44037794 MsG0880044538.01.T01:intron 35.0%
GGAAAATCACTACTTACTTG+TGG + Chr8:44041444-44041463 None:intergenic 35.0%
GGATAAGAAATGTTGAATGG+TGG - Chr8:44044035-44044054 MsG0880044538.01.T01:intron 35.0%
GGTGTAATTTGATCTGTGTT+GGG + Chr8:44046383-44046402 None:intergenic 35.0%
GGTGTTAGTTGTTTGTTTGA+AGG + Chr8:44045715-44045734 None:intergenic 35.0%
GTAACTATGAAAGACAACGT+TGG - Chr8:44044101-44044120 MsG0880044538.01.T01:intron 35.0%
GTGGAGAAGTGAAAATTTCA+GGG + Chr8:44038930-44038949 None:intergenic 35.0%
GTTACAGCATAGTATATGCA+TGG - Chr8:44039397-44039416 MsG0880044538.01.T01:intron 35.0%
GTTGCTTGGTCAATAAGATA+AGG - Chr8:44046163-44046182 MsG0880044538.01.T01:intron 35.0%
TACTGCAGCTTCACATTTAA+AGG - Chr8:44037977-44037996 MsG0880044538.01.T01:CDS 35.0%
TAGAATAAGGACTACACTAG+TGG + Chr8:44045532-44045551 None:intergenic 35.0%
TCAACCCATCTCTTAATACT+TGG + Chr8:44046631-44046650 None:intergenic 35.0%
TCAAGAGAAATATGTAGGCA+TGG - Chr8:44047690-44047709 MsG0880044538.01.T01:intron 35.0%
TCCCAAATTGTATGACGTAT+TGG + Chr8:44043349-44043368 None:intergenic 35.0%
TCCCACATCGAATAGAAAAA+TGG + Chr8:44042034-44042053 None:intergenic 35.0%
TCGGGTCAAATATCTTTGTT+GGG - Chr8:44045965-44045984 MsG0880044538.01.T01:intron 35.0%
TCTCACTTATGTAGTTGTCA+TGG + Chr8:44041937-44041956 None:intergenic 35.0%
TGATAACCACGTACATACAA+TGG - Chr8:44044620-44044639 MsG0880044538.01.T01:intron 35.0%
TGATCAACTCTAACCTAACA+AGG - Chr8:44039100-44039119 MsG0880044538.01.T01:intron 35.0%
TGATTCTCGGTTGAATCATT+TGG - Chr8:44047175-44047194 MsG0880044538.01.T01:intron 35.0%
TGGTGTAATTTGATCTGTGT+TGG + Chr8:44046384-44046403 None:intergenic 35.0%
TGGTGTTTCTCTAGTTAGAT+TGG + Chr8:44042565-44042584 None:intergenic 35.0%
TGTGGAGAAGTGAAAATTTC+AGG + Chr8:44038931-44038950 None:intergenic 35.0%
TGTTATTCTTCCTATACCTC+AGG - Chr8:44037242-44037261 MsG0880044538.01.T01:intron 35.0%
TTATCATTGCAAGTGAACAG+TGG + Chr8:44044606-44044625 None:intergenic 35.0%
TTCCAAAAATGTAGCCAGAT+AGG + Chr8:44040173-44040192 None:intergenic 35.0%
TTGAAAAGTTGCTGCATGTT+AGG - Chr8:44046647-44046666 MsG0880044538.01.T01:intron 35.0%
TTGCTGAGAGCTATAGAATA+AGG + Chr8:44045545-44045564 None:intergenic 35.0%
TTTCTCTCTCATACTCACAT+CGG + Chr8:44038775-44038794 None:intergenic 35.0%
! AAAGGTGTAGCAACTTACAT+GGG + Chr8:44040244-44040263 None:intergenic 35.0%
! AACCTATCTGGCTACATTTT+TGG - Chr8:44040168-44040187 MsG0880044538.01.T01:intron 35.0%
! AAGTACTTTTCCCAATCTTC+TGG - Chr8:44043010-44043029 MsG0880044538.01.T01:intron 35.0%
! AGATTTGAAATTCTGACCTG+AGG + Chr8:44037261-44037280 None:intergenic 35.0%
! AGCAATTTAAGTGACTAGTC+AGG - Chr8:44042223-44042242 MsG0880044538.01.T01:intron 35.0%
! AGTACTTTTCCCAATCTTCT+GGG - Chr8:44043011-44043030 MsG0880044538.01.T01:intron 35.0%
! CAAGGTGTTTATGGATGTTT+AGG + Chr8:44038587-44038606 None:intergenic 35.0%
! GAAAGAGCATAGAAGAAAAG+TGG + Chr8:44036994-44037013 None:intergenic 35.0%
! GCAATTTAAGTGACTAGTCA+GGG - Chr8:44042224-44042243 MsG0880044538.01.T01:intron 35.0%
! GTGGTAAATACTTTTACGCA+AGG + Chr8:44041425-44041444 None:intergenic 35.0%
! TATAGTTATAGGTGTCATGC+CGG - Chr8:44045231-44045250 MsG0880044538.01.T01:intron 35.0%
! TCATGAGTTTAAGGTTTCAC+CGG + Chr8:44046964-44046983 None:intergenic 35.0%
! TCCCAAATTATATGTCGCTT+TGG - Chr8:44043106-44043125 MsG0880044538.01.T01:intron 35.0%
! TGATGATGTGTGTATGTGTA+TGG - Chr8:44039319-44039338 MsG0880044538.01.T01:intron 35.0%
! TGTATGTGTCTTTTCATCGA+TGG - Chr8:44037027-44037046 MsG0880044538.01.T01:CDS 35.0%
! TGTCGTTTATAAGACCTAGA+AGG - Chr8:44047508-44047527 MsG0880044538.01.T01:CDS 35.0%
! TTTTAGTCTGATCGATCACA+GGG + Chr8:44045671-44045690 None:intergenic 35.0%
! TTTTGGATCTATAGATCCGT+AGG - Chr8:44040703-44040722 MsG0880044538.01.T01:intron 35.0%
!! AATTTGAAATTTGGTGCGGT+TGG + Chr8:44042488-44042507 None:intergenic 35.0%
!! ACATTGCTCTTTGAGACATT+TGG + Chr8:44042779-44042798 None:intergenic 35.0%
!! ACATTGGCTTATGACAAGAA+AGG + Chr8:44042831-44042850 None:intergenic 35.0%
!! ATTAGTCGCCTACTTTTGAT+GGG + Chr8:44039660-44039679 None:intergenic 35.0%
!! ATTTGAAATTTGGTGCGGTT+GGG + Chr8:44042487-44042506 None:intergenic 35.0%
!! CTCCATTTTTCTATTCGATG+TGG - Chr8:44042029-44042048 MsG0880044538.01.T01:intron 35.0%
!! CTGAGTGATAAATTTTGGGA+AGG + Chr8:44040125-44040144 None:intergenic 35.0%
!! GGTGTTGACACAAAAATCAA+AGG - Chr8:44038747-44038766 MsG0880044538.01.T01:intron 35.0%
!! GTTATGTAACTTGGTGTTCA+TGG + Chr8:44040961-44040980 None:intergenic 35.0%
!! TATTATTGGTGTCGACATGT+CGG + Chr8:44045187-44045206 None:intergenic 35.0%
!! TGTTTTTATCCTGCTCGTTT+CGG - Chr8:44038524-44038543 MsG0880044538.01.T01:intron 35.0%
!! TTCTCTTTTGATTATGCACC+CGG + Chr8:44042368-44042387 None:intergenic 35.0%
!! TTGTTTAGATTTGGTGAGAC+AGG - Chr8:44044204-44044223 MsG0880044538.01.T01:intron 35.0%
!! TTTTTAGTCTGATCGATCAC+AGG + Chr8:44045672-44045691 None:intergenic 35.0%
!!! ACATTTTTGGAACTGTTTGG+TGG - Chr8:44040181-44040200 MsG0880044538.01.T01:CDS 35.0%
!!! ATTTTTGGAACTGTTTGGTG+GGG - Chr8:44040183-44040202 MsG0880044538.01.T01:CDS 35.0%
!!! CATTTTTGGAACTGTTTGGT+GGG - Chr8:44040182-44040201 MsG0880044538.01.T01:CDS 35.0%
!!! GCTACATTTTTGGAACTGTT+TGG - Chr8:44040178-44040197 MsG0880044538.01.T01:CDS 35.0%
!!! GGTTGCTTATTGTTTTTTGG+TGG + Chr8:44042625-44042644 None:intergenic 35.0%
AACACCGTACTTCACAACTT+TGG - Chr8:44045729-44045748 MsG0880044538.01.T01:intron 40.0%
AACATCATTGTCTTGACGAG+TGG - Chr8:44043742-44043761 MsG0880044538.01.T01:intron 40.0%
AAGATATGGCAAGAATGGCA+TGG - Chr8:44042878-44042897 MsG0880044538.01.T01:intron 40.0%
AATATCAGGTTCGATTCCCA+GGG + Chr8:44039727-44039746 None:intergenic 40.0%
ACATCCATAAACACCTTGAC+AGG - Chr8:44038589-44038608 MsG0880044538.01.T01:intron 40.0%
ACTTTAGTGTCCTTCCATCT+CGG + Chr8:44042173-44042192 None:intergenic 40.0%
AGAAAGTCGGTCGCTAAATA+GGG - Chr8:44043944-44043963 MsG0880044538.01.T01:intron 40.0%
AGAAGCAAGTGATGCAATTG+AGG - Chr8:44044014-44044033 MsG0880044538.01.T01:intron 40.0%
AGAGGTCAAAGAAGAAACCA+CGG + Chr8:44037221-44037240 None:intergenic 40.0%
AGATATGGCAAGAATGGCAT+GGG - Chr8:44042879-44042898 MsG0880044538.01.T01:intron 40.0%
AGCAGCCAAGTATTAAGAGA+TGG - Chr8:44046623-44046642 MsG0880044538.01.T01:intron 40.0%
AGGAGAATATGATAGATCGC+AGG + Chr8:44042309-44042328 None:intergenic 40.0%
AGGGAGATGCATTATGTACT+AGG + Chr8:44039142-44039161 None:intergenic 40.0%
AGGGGGGAAATGATATCAAT+TGG + Chr8:44040865-44040884 None:intergenic 40.0%
AGTAGTATATCTCCTCTCCA+GGG + Chr8:44042143-44042162 None:intergenic 40.0%
ATACTGCAGATAGCAAGAGA+AGG - Chr8:44046554-44046573 MsG0880044538.01.T01:intron 40.0%
ATTCCTTCTTTGTTGGAGCA+AGG - Chr8:44040048-44040067 MsG0880044538.01.T01:intron 40.0%
CAAATCAGTGTTGTCAGAAC+TGG + Chr8:44047202-44047221 None:intergenic 40.0%
CAGGGGTTGTGATTGATTAT+AGG + Chr8:44045653-44045672 None:intergenic 40.0%
CATACTAAAATAGGCTGCAG+GGG - Chr8:44042720-44042739 MsG0880044538.01.T01:intron 40.0%
CCAATGTTCCAACATGTTTC+AGG + Chr8:44046304-44046323 None:intergenic 40.0%
CCTGAAACATGTTGGAACAT+TGG - Chr8:44046301-44046320 MsG0880044538.01.T01:intron 40.0%
CCTTATATACTGAAGCAGCT+CGG - Chr8:44045946-44045965 MsG0880044538.01.T01:intron 40.0%
CGAGCTGCTTCAGTATATAA+GGG + Chr8:44045948-44045967 None:intergenic 40.0%
CTCGGGTCAAATATCTTTGT+TGG - Chr8:44045964-44045983 MsG0880044538.01.T01:intron 40.0%
CTCTTTCTTTCTTCCTGTCA+AGG + Chr8:44038605-44038624 None:intergenic 40.0%
CTTATATACTGAAGCAGCTC+GGG - Chr8:44045947-44045966 MsG0880044538.01.T01:intron 40.0%
GAAATTCTGACCTGAGGTAT+AGG + Chr8:44037255-44037274 None:intergenic 40.0%
GAGAATATGATAGATCGCAG+GGG + Chr8:44042307-44042326 None:intergenic 40.0%
GATATTCACCAAGGGAGAAA+CGG - Chr8:44044438-44044457 MsG0880044538.01.T01:CDS 40.0%
GCAGCCAAGTATTAAGAGAT+GGG - Chr8:44046624-44046643 MsG0880044538.01.T01:intron 40.0%
GCATACTAAAATAGGCTGCA+GGG - Chr8:44042719-44042738 MsG0880044538.01.T01:intron 40.0%
GCCCAATACGTCATACAATT+TGG - Chr8:44043344-44043363 MsG0880044538.01.T01:intron 40.0%
GCTCCATAATTGAAGTGATC+AGG + Chr8:44042943-44042962 None:intergenic 40.0%
GGAGAATATGATAGATCGCA+GGG + Chr8:44042308-44042327 None:intergenic 40.0%
GGATTCCCTACATGGAAAAA+AGG - Chr8:44038545-44038564 MsG0880044538.01.T01:intron 40.0%
GGTCAAAACGACTGAACTTA+AGG + Chr8:44042329-44042348 None:intergenic 40.0%
GTACACGTTTGTGAAGGAAA+AGG - Chr8:44047380-44047399 MsG0880044538.01.T01:CDS 40.0%
GTCGTTCGTGATACATGTTA+AGG + Chr8:44045790-44045809 None:intergenic 40.0%
GTCTTCTCAAACACCATGAA+AGG + Chr8:44046700-44046719 None:intergenic 40.0%
GTTTCAACATATGGATGAGC+TGG - Chr8:44044381-44044400 MsG0880044538.01.T01:intron 40.0%
TACATTTGTTTCCTCGTCCT+TGG - Chr8:44043051-44043070 MsG0880044538.01.T01:intron 40.0%
TACGCAAGGTTGTCAAAATC+AGG + Chr8:44041411-44041430 None:intergenic 40.0%
TACGCCAAAGTTGTGAAGTA+CGG + Chr8:44045736-44045755 None:intergenic 40.0%
TAGAAAGTCGGTCGCTAAAT+AGG - Chr8:44043943-44043962 MsG0880044538.01.T01:intron 40.0%
TAGTAGTATATCTCCTCTCC+AGG + Chr8:44042144-44042163 None:intergenic 40.0%
TATATGTCGTTGCTTGCATG+CGG - Chr8:44037756-44037775 MsG0880044538.01.T01:intron 40.0%
TATCACGAACGACACAAGAA+AGG - Chr8:44045797-44045816 MsG0880044538.01.T01:intron 40.0%
TATGTATGAAACCAAGGACG+AGG + Chr8:44043065-44043084 None:intergenic 40.0%
TCAACCGAGAATCAATCAGT+TGG + Chr8:44047169-44047188 None:intergenic 40.0%
TCATTAAGCCCCAGAAGATT+GGG + Chr8:44043023-44043042 None:intergenic 40.0%
TGAGACATTTGGATGCTCTT+TGG + Chr8:44042768-44042787 None:intergenic 40.0%
TGCATACTAAAATAGGCTGC+AGG - Chr8:44042718-44042737 MsG0880044538.01.T01:intron 40.0%
TGGTTCCAACAACACATACA+TGG - Chr8:44046321-44046340 MsG0880044538.01.T01:intron 40.0%
TGTTAGGTACACGTTTGTGA+AGG - Chr8:44047374-44047393 MsG0880044538.01.T01:CDS 40.0%
TTAAGCTGAGTGAGTCTATG+AGG + Chr8:44042196-44042215 None:intergenic 40.0%
TTGGGCATTTCACACGTATT+AGG + Chr8:44043330-44043349 None:intergenic 40.0%
TTTAGTCTGATCGATCACAG+GGG + Chr8:44045670-44045689 None:intergenic 40.0%
! ACGCTTGCAATTGTGTTGTT+TGG + Chr8:44041659-44041678 None:intergenic 40.0%
! AGAAGAGGTTATGTTGGTGA+GGG + Chr8:44040884-44040903 None:intergenic 40.0%
! AGATTAGTCGGATCTTAGAC+CGG + Chr8:44044565-44044584 None:intergenic 40.0%
! CAATTGGAGCACCTAATGTA+AGG + Chr8:44040849-44040868 None:intergenic 40.0%
! CCAACCAACTGATTGATTCT+CGG - Chr8:44047162-44047181 MsG0880044538.01.T01:intron 40.0%
! CGGAGGGAGTAGTATTTTAT+AGG - Chr8:44043369-44043388 MsG0880044538.01.T01:intron 40.0%
! CTTGAAACAACAGAGGCTTT+TGG - Chr8:44046764-44046783 MsG0880044538.01.T01:intron 40.0%
! GAAAGGTGTAGCAACTTACA+TGG + Chr8:44040245-44040264 None:intergenic 40.0%
! GACATATAATTTGGGACGGA+GGG + Chr8:44043102-44043121 None:intergenic 40.0%
! GTACTTTTCCCAATCTTCTG+GGG - Chr8:44043012-44043031 MsG0880044538.01.T01:intron 40.0%
! GTATTGGCAATGGGGTAATT+TGG - Chr8:44037938-44037957 MsG0880044538.01.T01:CDS 40.0%
! GTTACCTGGTATTGAGTACT+TGG + Chr8:44042646-44042665 None:intergenic 40.0%
! TCTTCCTGTCAAGGTGTTTA+TGG + Chr8:44038596-44038615 None:intergenic 40.0%
! TGACTGATGCTTTGCACTTT+TGG - Chr8:44037085-44037104 MsG0880044538.01.T01:CDS 40.0%
! TGTGTCTTTTCATCGATGGA+TGG - Chr8:44037031-44037050 MsG0880044538.01.T01:CDS 40.0%
!! AAAAGGTGAAGAGAAGTGCT+AGG - Chr8:44047397-44047416 MsG0880044538.01.T01:CDS 40.0%
!! AACCGCAAAGTATTGGCAAT+GGG - Chr8:44037929-44037948 MsG0880044538.01.T01:CDS 40.0%
!! ACAAGTGTTGATGTTGACAG+TGG + Chr8:44046740-44046759 None:intergenic 40.0%
!! AGGAAAAAGCATTTGCCACA+GGG - Chr8:44044061-44044080 MsG0880044538.01.T01:intron 40.0%
!! ATGTAACTTGGTGTTCATGG+TGG + Chr8:44040958-44040977 None:intergenic 40.0%
!! GAAATGTTGAATGGTGGATG+AGG - Chr8:44044041-44044060 MsG0880044538.01.T01:intron 40.0%
!! GATTAGTCGCCTACTTTTGA+TGG + Chr8:44039661-44039680 None:intergenic 40.0%
!! GGAGTTTTATAGTGTCTCAG+TGG + Chr8:44041003-44041022 None:intergenic 40.0%
!! GGTGCCATTGTTTCAACATA+TGG - Chr8:44044372-44044391 MsG0880044538.01.T01:intron 40.0%
!! TAACCGCAAAGTATTGGCAA+TGG - Chr8:44037928-44037947 MsG0880044538.01.T01:CDS 40.0%
!! TTCAGTCGTTTTGACCTCTA+TGG - Chr8:44042333-44042352 MsG0880044538.01.T01:intron 40.0%
!! TTTGAAATTTGGTGCGGTTG+GGG + Chr8:44042486-44042505 None:intergenic 40.0%
!!! TTCTTGTTTTGCAGATCAGC+TGG + Chr8:44046012-44046031 None:intergenic 40.0%
AAAGCTTACCGTTTCTCCCT+TGG + Chr8:44044449-44044468 None:intergenic 45.0%
AATCGAACCTGATATTCCCC+GGG - Chr8:44039731-44039750 MsG0880044538.01.T01:intron 45.0%
AATCTAGGTAGGGACGTTGT+AGG + Chr8:44039162-44039181 None:intergenic 45.0%
ACATCAAAAAACCCCTGGAG+AGG - Chr8:44042128-44042147 MsG0880044538.01.T01:intron 45.0%
ACCCCATTGCCAATACTTTG+CGG + Chr8:44037934-44037953 None:intergenic 45.0%
ACCTAAAGGTTCCATCGAAC+AGG - Chr8:44041560-44041579 MsG0880044538.01.T01:intron 45.0%
ACCTCTATGGTCAAGCATAC+CGG - Chr8:44042346-44042365 MsG0880044538.01.T01:intron 45.0%
ACCTGTTCGATGGAACCTTT+AGG + Chr8:44041564-44041583 None:intergenic 45.0%
AGCAAGTATTAGTCGAGCTG+TGG - Chr8:44036894-44036913 MsG0880044538.01.T01:three_prime_UTR 45.0%
AGGGTAGTGAGATGAGATCT+CGG + Chr8:44045633-44045652 None:intergenic 45.0%
AGGTGTCTCTAAGTTGTTGG+AGG + Chr8:44041880-44041899 None:intergenic 45.0%
AGTGCTAGGTATTACTCACC+AGG - Chr8:44047411-44047430 MsG0880044538.01.T01:CDS 45.0%
AGTGGAAGACGCTCTATGAA+AGG + Chr8:44046722-44046741 None:intergenic 45.0%
AGTTGTCATGGCCTACATGT+CGG + Chr8:44041925-44041944 None:intergenic 45.0%
AGTTTATACGCAATCCGACC+CGG - Chr8:44042408-44042427 MsG0880044538.01.T01:intron 45.0%
ATATCAGGTTCGATTCCCAG+GGG + Chr8:44039726-44039745 None:intergenic 45.0%
ATCCGTGACATCTTACGTGT+AGG + Chr8:44041488-44041507 None:intergenic 45.0%
ATCTAGGTAGGGACGTTGTA+GGG + Chr8:44039161-44039180 None:intergenic 45.0%
ATGGTTCGCAGTCACTGTAA+CGG - Chr8:44037050-44037069 MsG0880044538.01.T01:CDS 45.0%
CACCTACACGTAAGATGTCA+CGG - Chr8:44041483-44041502 MsG0880044538.01.T01:intron 45.0%
CAGAGATGCCTGAAACATGT+TGG - Chr8:44046293-44046312 MsG0880044538.01.T01:intron 45.0%
CAGCAACCGGTGAATATAGA+AGG - Chr8:44036861-44036880 MsG0880044538.01.T01:three_prime_UTR 45.0%
CAGGCATCTCTGTAAGATGT+TGG + Chr8:44046285-44046304 None:intergenic 45.0%
CCATACAATTGGCATGGAGA+AGG - Chr8:44047457-44047476 MsG0880044538.01.T01:CDS 45.0%
CCGAGAATCAATCAGTTGGT+TGG + Chr8:44047165-44047184 None:intergenic 45.0%
CCGAGCTGCTTCAGTATATA+AGG + Chr8:44045949-44045968 None:intergenic 45.0%
CCTTCTCCATGCCAATTGTA+TGG + Chr8:44047460-44047479 None:intergenic 45.0%
CGCGCGCCATAGATTATTTA+AGG + Chr8:44046204-44046223 None:intergenic 45.0%
CTAGGCCTTTAGTGTAAACG+AGG + Chr8:44045571-44045590 None:intergenic 45.0%
CTCGTTTACACTAAAGGCCT+AGG - Chr8:44045569-44045588 MsG0880044538.01.T01:intron 45.0%
CTTTAGTGTCCTTCCATCTC+GGG + Chr8:44042172-44042191 None:intergenic 45.0%
GAACCTTGCTCCAACAAAGA+AGG + Chr8:44040054-44040073 None:intergenic 45.0%
GAATATCAGGTTCGATTCCC+AGG + Chr8:44039728-44039747 None:intergenic 45.0%
GAATCGAACCTGATATTCCC+CGG - Chr8:44039730-44039749 MsG0880044538.01.T01:intron 45.0%
GAGAAGAGGTTATGTTGGTG+AGG + Chr8:44040885-44040904 None:intergenic 45.0%
GATAAGCAAGAGCGACCAAA+CGG + Chr8:44037188-44037207 None:intergenic 45.0%
GCAACCAAGTACTCAATACC+AGG - Chr8:44042639-44042658 MsG0880044538.01.T01:intron 45.0%
GGAGCAAGGTTCAGTTACAT+TGG - Chr8:44040062-44040081 MsG0880044538.01.T01:intron 45.0%
GGTGGCTATTCCTTCTTTGT+TGG - Chr8:44040041-44040060 MsG0880044538.01.T01:intron 45.0%
GGTGTCTCTAAGTTGTTGGA+GGG + Chr8:44041879-44041898 None:intergenic 45.0%
GTAAAGATATGCGCGTTGCT+TGG - Chr8:44046149-44046168 MsG0880044538.01.T01:intron 45.0%
GTAGTATATCTCCTCTCCAG+GGG + Chr8:44042142-44042161 None:intergenic 45.0%
GTCATTAAGCCCCAGAAGAT+TGG + Chr8:44043024-44043043 None:intergenic 45.0%
GTGACAAACACACCTACTCT+GGG - Chr8:44045483-44045502 MsG0880044538.01.T01:intron 45.0%
GTGACATACTTGTGCGTGTT+TGG + Chr8:44041749-44041768 None:intergenic 45.0%
GTGCTAGGTATTACTCACCA+GGG - Chr8:44047412-44047431 MsG0880044538.01.T01:CDS 45.0%
GTTTCCGACCCATCAAAAGT+AGG - Chr8:44039649-44039668 MsG0880044538.01.T01:intron 45.0%
TAAAGGTTCCATCGAACAGG+TGG - Chr8:44041563-44041582 MsG0880044538.01.T01:intron 45.0%
TAGGACCAGGAAACTTCAGT+GGG - Chr8:44046666-44046685 MsG0880044538.01.T01:intron 45.0%
TAGGTTTCGCTGGTATGGAA+GGG + Chr8:44040922-44040941 None:intergenic 45.0%
TATCTTCCTCCGCTTCAAGA+CGG - Chr8:44037110-44037129 MsG0880044538.01.T01:CDS 45.0%
TCGACTAATTAGGCGTGTCT+CGG + Chr8:44045283-44045302 None:intergenic 45.0%
TCTTGCTAGTATGTGCAGCA+GGG - Chr8:44036956-44036975 MsG0880044538.01.T01:three_prime_UTR 45.0%
TGACAAACACACCTACTCTG+GGG - Chr8:44045484-44045503 MsG0880044538.01.T01:intron 45.0%
TGAGATGAGATCTCGGATCT+AGG + Chr8:44045626-44045645 None:intergenic 45.0%
TGTCACGCTTGAAACAACAG+AGG - Chr8:44046757-44046776 MsG0880044538.01.T01:intron 45.0%
TTAGGACCAGGAAACTTCAG+TGG - Chr8:44046665-44046684 MsG0880044538.01.T01:intron 45.0%
TTCTTGCTAGTATGTGCAGC+AGG - Chr8:44036955-44036974 MsG0880044538.01.T01:three_prime_UTR 45.0%
TTTGTACAGCCATGTTTGGC+CGG + Chr8:44042430-44042449 None:intergenic 45.0%
! AAGAGGTTATGTTGGTGAGG+GGG + Chr8:44040882-44040901 None:intergenic 45.0%
! AATTGGCATGGAGAAGGTAC+AGG - Chr8:44047463-44047482 MsG0880044538.01.T01:CDS 45.0%
! CGACATATAATTTGGGACGG+AGG + Chr8:44043103-44043122 None:intergenic 45.0%
! GAAGAGGTTATGTTGGTGAG+GGG + Chr8:44040883-44040902 None:intergenic 45.0%
! GATTAGTCGGATCTTAGACC+GGG + Chr8:44044564-44044583 None:intergenic 45.0%
! GCAAAGCATCAGTCATGCAA+CGG + Chr8:44037080-44037099 None:intergenic 45.0%
! GTCATACAATTTGGGACGGA+GGG - Chr8:44043353-44043372 MsG0880044538.01.T01:intron 45.0%
! GTGTAATGCTCTGCCTTGTT+AGG + Chr8:44039116-44039135 None:intergenic 45.0%
! TCATCAGATTGTGCTTTGGG+TGG - Chr8:44040023-44040042 MsG0880044538.01.T01:intron 45.0%
! TGACTAGTCAGGGTAAACGA+GGG - Chr8:44042234-44042253 MsG0880044538.01.T01:intron 45.0%
! TTCTTTGCACCGACACGAAA+CGG - Chr8:44045158-44045177 MsG0880044538.01.T01:intron 45.0%
!! ACACTAGTGGATTTCCTTCC+TGG + Chr8:44045519-44045538 None:intergenic 45.0%
!! ACCGCAAAGTATTGGCAATG+GGG - Chr8:44037930-44037949 MsG0880044538.01.T01:CDS 45.0%
!! ACTTTTGATGGGTCGGAAAC+CGG + Chr8:44039649-44039668 None:intergenic 45.0%
!! AGGTTGATGGTAAAGTGGCA+TGG + Chr8:44040565-44040584 None:intergenic 45.0%
!! AGTGAGTTTGTTGACCCAGT+TGG - Chr8:44045460-44045479 MsG0880044538.01.T01:intron 45.0%
!! GAGGAAAAAGCATTTGCCAC+AGG - Chr8:44044060-44044079 MsG0880044538.01.T01:intron 45.0%
!! GTGAGTTTGTTGACCCAGTT+GGG - Chr8:44045461-44045480 MsG0880044538.01.T01:intron 45.0%
!! ATAATAATAATGATAATTAT+AGG - Chr8:44039466-44039485 MsG0880044538.01.T01:intron 5.0%
!! GTTATAAATAAATATAAAAT+TGG + Chr8:44038444-44038463 None:intergenic 5.0%
!! TTATTTATTCAAATTATTAT+TGG + Chr8:44045201-44045220 None:intergenic 5.0%
!!! AATAAAAAGATTATTTTTAT+TGG + Chr8:44047023-44047042 None:intergenic 5.0%
!!! TGTTTTTTTTTTTTTTTTTT+TGG + Chr8:44041465-44041484 None:intergenic 5.0%
!!! TTTTTTTTTTTTAAAAAAAG+AGG - Chr8:44038985-44039004 MsG0880044538.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTAAGA+TGG - Chr8:44037879-44037898 MsG0880044538.01.T01:CDS 5.0%
AATGGCATGGGCAGGGAATA+GGG - Chr8:44042891-44042910 MsG0880044538.01.T01:intron 50.0%
ACACGTTGTCGAAATCCCTG+TGG + Chr8:44044079-44044098 None:intergenic 50.0%
ACGTCGTCTAGGTAGTTCTC+CGG + Chr8:44036816-44036835 None:intergenic 50.0%
AGGACCAGGAAACTTCAGTG+GGG - Chr8:44046667-44046686 MsG0880044538.01.T01:intron 50.0%
AGGTGTGTTTGTCACCCAAC+TGG + Chr8:44045478-44045497 None:intergenic 50.0%
AGTTGCTGCATGTTAGGACC+AGG - Chr8:44046653-44046672 MsG0880044538.01.T01:intron 50.0%
ATAGATCGCAGGGGTCTTCA+AGG + Chr8:44042298-44042317 None:intergenic 50.0%
ATATTCCCCGGGTACGTCTT+TGG - Chr8:44039742-44039761 MsG0880044538.01.T01:intron 50.0%
ATGTGCAGCAGGGTTGTTTG+TGG - Chr8:44036966-44036985 MsG0880044538.01.T01:three_prime_UTR 50.0%
CATCATCATCGACGTCGTCT+AGG + Chr8:44036827-44036846 None:intergenic 50.0%
CATCTTGACAAGGGCCTTCT+AGG + Chr8:44047525-44047544 None:intergenic 50.0%
CCTCTATGGTCAAGCATACC+GGG - Chr8:44042347-44042366 MsG0880044538.01.T01:intron 50.0%
CGACGCACACAAAACCTATC+TGG - Chr8:44040156-44040175 MsG0880044538.01.T01:intron 50.0%
CGCTGGTATGGAAGGGATTA+GGG + Chr8:44040915-44040934 None:intergenic 50.0%
CTAGGTATTACTCACCAGGG+TGG - Chr8:44047415-44047434 MsG0880044538.01.T01:CDS 50.0%
CTCGTTTCGGATTCCCTACA+TGG - Chr8:44038537-44038556 MsG0880044538.01.T01:intron 50.0%
CTCTCGAATGCTTGTGTTGC+AGG - Chr8:44043967-44043986 MsG0880044538.01.T01:intron 50.0%
CTGTGGCCATACAATTGGCA+TGG - Chr8:44047451-44047470 MsG0880044538.01.T01:CDS 50.0%
CTTGCACCCACTTTGCTCTT+GGG + Chr8:44036921-44036940 None:intergenic 50.0%
GACAAACACACCTACTCTGG+GGG - Chr8:44045485-44045504 MsG0880044538.01.T01:intron 50.0%
GACACGATGTTCCAACATCC+TGG + Chr8:44046263-44046282 None:intergenic 50.0%
GAGACACGCCTAATTAGTCG+AGG - Chr8:44045282-44045301 MsG0880044538.01.T01:intron 50.0%
GAGCAAAGTGGGTGCAAGAA+TGG - Chr8:44036923-44036942 MsG0880044538.01.T01:three_prime_UTR 50.0%
GATGTTCCAACATCCTGGCA+CGG + Chr8:44046258-44046277 None:intergenic 50.0%
GGGCATGCTGGTACTTATTG+GGG - Chr8:44042740-44042759 MsG0880044538.01.T01:intron 50.0%
GGGGCATGCTGGTACTTATT+GGG - Chr8:44042739-44042758 MsG0880044538.01.T01:intron 50.0%
GGTCAAAGAAGAAACCACGG+CGG + Chr8:44037218-44037237 None:intergenic 50.0%
GGTGACAAACACACCTACTC+TGG - Chr8:44045482-44045501 MsG0880044538.01.T01:intron 50.0%
GGTGTGTTTGTCACCCAACT+GGG + Chr8:44045477-44045496 None:intergenic 50.0%
GTAGGTTTCGCTGGTATGGA+AGG + Chr8:44040923-44040942 None:intergenic 50.0%
GTCAAAGAAGAAACCACGGC+GGG + Chr8:44037217-44037236 None:intergenic 50.0%
TACTACTAAGCCACCCGAGA+TGG - Chr8:44042156-44042175 MsG0880044538.01.T01:intron 50.0%
TATCAGGTTCGATTCCCAGG+GGG + Chr8:44039725-44039744 None:intergenic 50.0%
TCCATACCAGCGAAACCTAC+AGG - Chr8:44040923-44040942 MsG0880044538.01.T01:intron 50.0%
TCGCTGGTATGGAAGGGATT+AGG + Chr8:44040916-44040935 None:intergenic 50.0%
TCTCGGATCTAGGAGTTCCT+AGG + Chr8:44045616-44045635 None:intergenic 50.0%
TCTTGCACCCACTTTGCTCT+TGG + Chr8:44036922-44036941 None:intergenic 50.0%
TGGCACGGTTCAGTGTGTAT+GGG + Chr8:44046243-44046262 None:intergenic 50.0%
TGTGGACCCAAGAGCAAAGT+GGG - Chr8:44036912-44036931 MsG0880044538.01.T01:three_prime_UTR 50.0%
TTGTACAGCCATGTTTGGCC+GGG + Chr8:44042429-44042448 None:intergenic 50.0%
! AATTAGGCGTGTCTCGGTGT+CGG + Chr8:44045277-44045296 None:intergenic 50.0%
! ACCTAGAGAGCACAACGGAT+TGG - Chr8:44043704-44043723 MsG0880044538.01.T01:intron 50.0%
! AGAGGTTATGTTGGTGAGGG+GGG + Chr8:44040881-44040900 None:intergenic 50.0%
! AGGGGCATGCTGGTACTTAT+TGG - Chr8:44042738-44042757 MsG0880044538.01.T01:intron 50.0%
! AGTGGATTTCCTTCCTGGCT+TGG + Chr8:44045514-44045533 None:intergenic 50.0%
! ATCAACACCCAAGTGTCGCA+CGG + Chr8:44047847-44047866 None:intergenic 50.0%
! CATGGAGAAGGTACAGGCAT+AGG - Chr8:44047469-44047488 MsG0880044538.01.T01:CDS 50.0%
! CGGAAACCTAGAGAGCACAA+CGG - Chr8:44043699-44043718 MsG0880044538.01.T01:intron 50.0%
! CGTCATACAATTTGGGACGG+AGG - Chr8:44043352-44043371 MsG0880044538.01.T01:intron 50.0%
! CTAATCTGACTCGTGCGTAG+AGG - Chr8:44039675-44039694 MsG0880044538.01.T01:intron 50.0%
! GCGAGGTGTCTCTAAGTTGT+TGG + Chr8:44041883-44041902 None:intergenic 50.0%
! GTGACTAGTCAGGGTAAACG+AGG - Chr8:44042233-44042252 MsG0880044538.01.T01:intron 50.0%
! TATAGGTGTCATGCCGGCAT+CGG - Chr8:44045237-44045256 MsG0880044538.01.T01:intron 50.0%
! TCTGGGGCTTAATGACTCTC+AGG - Chr8:44043028-44043047 MsG0880044538.01.T01:intron 50.0%
!! ACTTGGTGTTCATGGTGGTG+AGG + Chr8:44040953-44040972 None:intergenic 50.0%
!! GGTTTTGTGTGCGTCGCAAA+TGG + Chr8:44040152-44040171 None:intergenic 50.0%
!! GTCGCCTACTTTTGATGGGT+CGG + Chr8:44039656-44039675 None:intergenic 50.0%
!! TGTCGATTCCACCTGTTCGA+TGG + Chr8:44041574-44041593 None:intergenic 50.0%
!!! GGCTTTTGGTCTTGAAGCTG+AGG - Chr8:44046778-44046797 MsG0880044538.01.T01:intron 50.0%
AAGCAAGAGCGACCAAACGG+CGG + Chr8:44037185-44037204 None:intergenic 55.0%
ACTAAGCCACCCGAGATGGA+AGG - Chr8:44042160-44042179 MsG0880044538.01.T01:intron 55.0%
ACTCACCAGGGTGGAGAACT+TGG - Chr8:44047424-44047443 MsG0880044538.01.T01:CDS 55.0%
ACTGAACCGTGCCAGGATGT+TGG - Chr8:44046249-44046268 MsG0880044538.01.T01:intron 55.0%
AGACGTACCCGGGGAATATC+AGG + Chr8:44039741-44039760 None:intergenic 55.0%
AGGTGTCTCTAATGTCGGCG+AGG + Chr8:44041900-44041919 None:intergenic 55.0%
ATGGCAAGAATGGCATGGGC+AGG - Chr8:44042883-44042902 MsG0880044538.01.T01:intron 55.0%
CATACACACTGAACCGTGCC+AGG - Chr8:44046242-44046261 MsG0880044538.01.T01:intron 55.0%
CCAAATTGCTTGGGCTCCAG+TGG + Chr8:44039781-44039800 None:intergenic 55.0%
CCACTGGAGCCCAAGCAATT+TGG - Chr8:44039778-44039797 MsG0880044538.01.T01:intron 55.0%
CCCGGTATGCTTGACCATAG+AGG + Chr8:44042350-44042369 None:intergenic 55.0%
CGAGGAAGAAGAGCAGCAAC+CGG - Chr8:44036848-44036867 MsG0880044538.01.T01:three_prime_UTR 55.0%
CTCACCAGGGTGGAGAACTT+GGG - Chr8:44047425-44047444 MsG0880044538.01.T01:CDS 55.0%
CTCAGTTGCGTCATCGTTCG+CGG + Chr8:44036784-44036803 None:intergenic 55.0%
CTCCTTCCAAAGACGTACCC+GGG + Chr8:44039751-44039770 None:intergenic 55.0%
CTGGCACGGTTCAGTGTGTA+TGG + Chr8:44046244-44046263 None:intergenic 55.0%
CTGTGGACCCAAGAGCAAAG+TGG - Chr8:44036911-44036930 MsG0880044538.01.T01:three_prime_UTR 55.0%
GAATGGCATGGGCAGGGAAT+AGG - Chr8:44042890-44042909 MsG0880044538.01.T01:intron 55.0%
GCCAATCCGTTGTGCTCTCT+AGG + Chr8:44043708-44043727 None:intergenic 55.0%
GCCTGTAGGTTTCGCTGGTA+TGG + Chr8:44040927-44040946 None:intergenic 55.0%
GCTCCTTCCAAAGACGTACC+CGG + Chr8:44039752-44039771 None:intergenic 55.0%
GCTTATCTTAAGTCCCGCCG+TGG - Chr8:44037201-44037220 MsG0880044538.01.T01:CDS 55.0%
GTAGGGAATCCGAAACGAGC+AGG + Chr8:44038536-44038555 None:intergenic 55.0%
TAGTGTCCTTCCATCTCGGG+TGG + Chr8:44042169-44042188 None:intergenic 55.0%
TCACCAGGGTGGAGAACTTG+GGG - Chr8:44047426-44047445 MsG0880044538.01.T01:CDS 55.0%
TCCTTCCAAAGACGTACCCG+GGG + Chr8:44039750-44039769 None:intergenic 55.0%
TCGTCCCCACTGAAGTTTCC+TGG + Chr8:44046674-44046693 None:intergenic 55.0%
TCTATGGCGCGCGTACAAAC+AGG - Chr8:44046211-44046230 MsG0880044538.01.T01:intron 55.0%
TGCGTTTCGCCGTCTTGAAG+CGG + Chr8:44037122-44037141 None:intergenic 55.0%
TGGCAAGAATGGCATGGGCA+GGG - Chr8:44042884-44042903 MsG0880044538.01.T01:intron 55.0%
! CGACGTCGATGATGATGACG+AGG - Chr8:44036830-44036849 MsG0880044538.01.T01:three_prime_UTR 55.0%
! CGGCGAGGTGTCTCTAATGT+CGG + Chr8:44041905-44041924 None:intergenic 55.0%
! GGGTGCTGTGGCCATACAAT+TGG - Chr8:44047446-44047465 MsG0880044538.01.T01:CDS 55.0%
! GGTGTTCATGGTGGTGAGGT+TGG + Chr8:44040949-44040968 None:intergenic 55.0%
! TCAACACCCAAGTGTCGCAC+GGG + Chr8:44047846-44047865 None:intergenic 55.0%
! TGTCGGTGTCCGTTTCGTGT+CGG + Chr8:44045170-44045189 None:intergenic 55.0%
!! ATTAGGCGTGTCTCGGTGTC+GGG + Chr8:44045276-44045295 None:intergenic 55.0%
AACGTTGGGCTGCTATGCGC+GGG - Chr8:44044116-44044135 MsG0880044538.01.T01:intron 60.0%
ACAGCCATGTTTGGCCGGGT+CGG + Chr8:44042425-44042444 None:intergenic 60.0%
CAACGTTGGGCTGCTATGCG+CGG - Chr8:44044115-44044134 MsG0880044538.01.T01:intron 60.0%
CAATCCGACCCGGCCAAACA+TGG - Chr8:44042418-44042437 MsG0880044538.01.T01:intron 60.0%
CGCAACTGAGGACAGTGAGC+CGG - Chr8:44036794-44036813 MsG0880044538.01.T01:three_prime_UTR 60.0%
CGCGAACGATGACGCAACTG+AGG - Chr8:44036782-44036801 MsG0880044538.01.T01:three_prime_UTR 60.0%
GAGACACCTCGCCGACATGT+AGG - Chr8:44041911-44041930 MsG0880044538.01.T01:intron 60.0%
GATCGCAGGGGTCTTCAAGG+AGG + Chr8:44042295-44042314 None:intergenic 60.0%
GGGCAGGGAATAGGGAAGCA+AGG - Chr8:44042899-44042918 MsG0880044538.01.T01:intron 60.0%
GTGGGGACGAGCTCCTTTCA+TGG - Chr8:44046684-44046703 MsG0880044538.01.T01:intron 60.0%
GTTTCGCCGTCTTGAAGCGG+AGG + Chr8:44037119-44037138 None:intergenic 60.0%
TCATGGCCTACATGTCGGCG+AGG + Chr8:44041920-44041939 None:intergenic 60.0%
TCCCCGGGTACGTCTTTGGA+AGG - Chr8:44039746-44039765 MsG0880044538.01.T01:intron 60.0%
TGCTAACCATTCGGCCACCG+CGG - Chr8:44037155-44037174 MsG0880044538.01.T01:CDS 60.0%
TGGAAGGAGCTCCTTGCCAC+TGG - Chr8:44039762-44039781 MsG0880044538.01.T01:intron 60.0%
TTCCCAGGGGGAACAACGCT+TGG + Chr8:44039713-44039732 None:intergenic 60.0%
TTGCTTGGGCTCCAGTGGCA+AGG + Chr8:44039776-44039795 None:intergenic 60.0%
! AATAGGCTGCAGGGGCATGC+TGG - Chr8:44042728-44042747 MsG0880044538.01.T01:intron 60.0%
! AGCCAAGCGTTGTTCCCCCT+GGG - Chr8:44039708-44039727 MsG0880044538.01.T01:intron 60.0%
! GTCATGCCGGCATCGGACAT+TGG - Chr8:44045244-44045263 MsG0880044538.01.T01:intron 60.0%
! TAGCCAAGCGTTGTTCCCCC+TGG - Chr8:44039707-44039726 MsG0880044538.01.T01:intron 60.0%
!! GGTTGGCCTGTAGGTTTCGC+TGG + Chr8:44040932-44040951 None:intergenic 60.0%
!! GTGGAGAACTTGGGGTGCTG+TGG - Chr8:44047434-44047453 MsG0880044538.01.T01:CDS 60.0%
!! TGGTGGTGAGGTTGGCCTGT+AGG + Chr8:44040941-44040960 None:intergenic 60.0%
AACCATTCGGCCACCGCGGA+TGG - Chr8:44037159-44037178 MsG0880044538.01.T01:CDS 65.0%
ACGTTGGGCTGCTATGCGCG+GGG - Chr8:44044117-44044136 MsG0880044538.01.T01:intron 65.0%
CACGCGCCAATGTCCGATGC+CGG + Chr8:44045253-44045272 None:intergenic 65.0%
GCACCCCAAGTTCTCCACCC+TGG + Chr8:44047432-44047451 None:intergenic 65.0%
TGGGGGCTACCAAGCCAGGA+AGG - Chr8:44045502-44045521 MsG0880044538.01.T01:intron 65.0%
! ACTCTGGGGGCTACCAAGCC+AGG - Chr8:44045498-44045517 MsG0880044538.01.T01:intron 65.0%
! GGCTTGGTAGCCCCCAGAGT+AGG + Chr8:44045498-44045517 None:intergenic 65.0%
AGCGTGGCCCGTGCGACACT+TGG - Chr8:44047836-44047855 MsG0880044538.01.T01:CDS 70.0%
GACCAAACGGCGGCCATCCG+CGG + Chr8:44037175-44037194 None:intergenic 70.0%
GCGTGGCCCGTGCGACACTT+GGG - Chr8:44047837-44047856 MsG0880044538.01.T01:CDS 70.0%
CAAACGGCGGCCATCCGCGG+TGG + Chr8:44037172-44037191 None:intergenic 75.0%
CACCGCGGATGGCCGCCGTT+TGG - Chr8:44037170-44037189 MsG0880044538.01.T01:CDS 75.0%
GGCCATCCGCGGTGGCCGAA+TGG + Chr8:44037164-44037183 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 44036771 44047866 44036771 ID=MsG0880044538.01;Name=MsG0880044538.01
Chr8 mRNA 44036771 44047866 44036771 ID=MsG0880044538.01.T01;Parent=MsG0880044538.01;Name=MsG0880044538.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0.71|0.62|1|1|1|8|237|549
Chr8 exon 44047755 44047866 44047755 ID=MsG0880044538.01.T01:exon:8370;Parent=MsG0880044538.01.T01
Chr8 exon 44047374 44047576 44047374 ID=MsG0880044538.01.T01:exon:8371;Parent=MsG0880044538.01.T01
Chr8 exon 44044392 44044607 44044392 ID=MsG0880044538.01.T01:exon:8372;Parent=MsG0880044538.01.T01
Chr8 exon 44041626 44041904 44041626 ID=MsG0880044538.01.T01:exon:8373;Parent=MsG0880044538.01.T01
Chr8 exon 44040412 44040648 44040412 ID=MsG0880044538.01.T01:exon:8374;Parent=MsG0880044538.01.T01
Chr8 exon 44040178 44040264 44040178 ID=MsG0880044538.01.T01:exon:8375;Parent=MsG0880044538.01.T01
Chr8 exon 44037809 44038074 44037809 ID=MsG0880044538.01.T01:exon:8376;Parent=MsG0880044538.01.T01
Chr8 exon 44036771 44037257 44036771 ID=MsG0880044538.01.T01:exon:8377;Parent=MsG0880044538.01.T01
Chr8 CDS 44047755 44047866 44047755 ID=MsG0880044538.01.T01:cds;Parent=MsG0880044538.01.T01
Chr8 CDS 44047374 44047576 44047374 ID=MsG0880044538.01.T01:cds;Parent=MsG0880044538.01.T01
Chr8 CDS 44044392 44044607 44044392 ID=MsG0880044538.01.T01:cds;Parent=MsG0880044538.01.T01
Chr8 CDS 44041626 44041904 44041626 ID=MsG0880044538.01.T01:cds;Parent=MsG0880044538.01.T01
Chr8 CDS 44040412 44040648 44040412 ID=MsG0880044538.01.T01:cds;Parent=MsG0880044538.01.T01
Chr8 CDS 44040178 44040264 44040178 ID=MsG0880044538.01.T01:cds;Parent=MsG0880044538.01.T01
Chr8 CDS 44037809 44038074 44037809 ID=MsG0880044538.01.T01:cds;Parent=MsG0880044538.01.T01
Chr8 CDS 44037008 44037257 44037008 ID=MsG0880044538.01.T01:cds;Parent=MsG0880044538.01.T01
Chr8 three_prime_UTR 44036771 44037007 44036771 ID=MsG0880044538.01.T01:three_prime_utr;Parent=MsG0880044538.01.T01
Gene Sequence

>MsG0880044538.01.T01

ATGCACGACACCGCGAACGATGACGCAACTGAGGACAGTGAGCCGGAGAACTACCTAGACGACGTCGATGATGATGACGAGGAAGAAGAGCAGCAACCGGTGAATATAGAAGTCACTGTAACGGTGCTCCGTTGCATGACTGATGCTTTGCACTTTTGGAATATCTTCCTCCGCTTCAAGACGGCGAAACGCAGCTCACTTACATTTGCTAACCATTCGGCCACCGCGGATGGCCGCCGTTTGGTCGCTCTTGCTTATCTTAAGTCCCGCCGTGGTTTCTTCTTTGACCTCTTTGTTATTCTTCCTATACCTCAGATTGTGCTTTGGGTGGCTATTCCTTCTTTGTTGGAGCAAGGTTCAGTTACATTGGTGATGACAATATTGTTAATTGTATTTCTGTTCCAATACCTTCCCAAAATTTATCACTCAGTATGCCATTTGCGACGCACACAAAACCTATCTGGCTACATTTTTGGAACTGTTTGGTGGGGTATTGCCCTTAACATGATTGCGTATTTTGTTGCTTCCCATGCTGCAGGGGCATGCTGGTACTTATTGGGGATCCAAAGAGCATCCAAATGTCTCAAAGAGCAATGTTATAAAACAAATGGTTGTGGTATTAATCTCCTTTCTTGTCATAAGCCAATGTATTATGGAAGTACAAGTTTGTTGAATAAAGATATGGCAAGAATGGCATGGGCAGGGAATAGGGAAGCAAGGTCTGCATGCTTAAATAGTCCTGATCACTTCAATTATGGAGCTTATAAATGGACTGTTCAACTTTTCACTAATGAGAACCGACTAGAAAAAGTATTTTTGCATGCAACAACGTCGAAGAAGCAAGTGATGCAATTGAGGATAAGAAATGTTGAATGGTGGATGAGGAAAAAGCATTTGCCACAGGGATTTCGACAACGTGTGCGTAACTATGAAAGACAACGTTGGGCTGCTATGCGCGGGGTTGATGAATGTGAAATGACCAAAAATCTTCCTGAAGGTTTAAGAAGAGACATTAAATACCATCTTTGTTTAGATTTGGTGAGACAGGTGCCATTGTTTCAACATATGGATGAGCTGGTTCTAGAGAACATATGTGACCGAGTGAAATCTCTGATATTCACCAAGGGAGAAACGATAGCAAGAGAAGGAGACCCAGTTCAAAGAATGTTATTTGTAGTGAGGGGTCATCTTCAAAGCAGCCAAGTATTAAGAGATGGGTTGAAAAGTTGCTGCATGTTAGGACCAGGAAACTTCAGTGGGGACGAGCTCCTTTCATGGTGTTTGAGAAGACCTTTCATAGAGCGTCTTCCACTGTCAACATCAACACTTGTCACGCTTGAAACAACAGAGGCTTTTGGTCTTGAAGCTGAGGATGTCAAGTATGTGACACAACATTTCAGGTACACGTTTGTGAAGGAAAAGGTGAAGAGAAGTGCTAGGTATTACTCACCAGGGTGGAGAACTTGGGGTGCTGTGGCCATACAATTGGCATGGAGAAGGTACAGGCATAGGTTAACTTTGAACTCATTGTCGTTTATAAGACCTAGAAGGCCCTTGTCAAGATGTTCTTCATTGGGAGAAGATAGACTTCGAATCTACACAGCTTTGTTAACTTCGCCAAAGCCTAATCAAGATGATTTTGACTTTTGA

Protein sequence

>MsG0880044538.01.T01

MHDTANDDATEDSEPENYLDDVDDDDEEEEQQPVNIEVTVTVLRCMTDALHFWNIFLRFKTAKRSSLTFANHSATADGRRLVALAYLKSRRGFFFDLFVILPIPQIVLWVAIPSLLEQGSVTLVMTILLIVFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRASKCLKEQCYKTNGCGINLLSCHKPMYYGSTSLLNKDMARMAWAGNREARSACLNSPDHFNYGAYKWTVQLFTNENRLEKVFLHATTSKKQVMQLRIRNVEWWMRKKHLPQGFRQRVRNYERQRWAAMRGVDECEMTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGLKSCCMLGPGNFSGDELLSWCLRRPFIERLPLSTSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWGAVAIQLAWRRYRHRLTLNSLSFIRPRRPLSRCSSLGEDRLRIYTALLTSPKPNQDDFDF*