AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005485.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005485.01.T01 MTR_1g101280 81.481 324 42 4 265 587 447 753 2.10e-172 508
MsG0180005485.01.T01 MTR_1g101280 77.907 344 52 6 1 323 1 341 4.33e-157 468
MsG0180005485.01.T01 MTR_8g432540 63.467 323 98 6 265 585 503 807 2.34e-123 383
MsG0180005485.01.T01 MTR_8g432540 49.582 359 120 11 1 323 64 397 1.82e-89 294
MsG0180005485.01.T01 MTR_7g076080 71.200 250 63 2 338 585 533 775 9.19e-115 360
MsG0180005485.01.T01 MTR_7g076080 50.769 325 105 11 30 323 69 369 8.57e-85 281
MsG0180005485.01.T01 MTR_0198s0030 50.287 348 139 10 1 322 1 340 3.02e-94 305
MsG0180005485.01.T01 MTR_0198s0030 54.086 257 106 5 338 586 501 753 2.50e-74 252
MsG0180005485.01.T01 MTR_2g088470 61.905 252 88 2 333 584 489 732 2.89e-90 294
MsG0180005485.01.T01 MTR_2g088470 40.240 333 150 11 21 331 34 339 4.85e-58 207
MsG0180005485.01.T01 MTR_4g047800 59.921 252 98 2 333 584 481 729 7.81e-86 282
MsG0180005485.01.T01 MTR_4g047800 38.438 333 154 12 21 331 28 331 1.20e-56 203
MsG0180005485.01.T01 MTR_2g101720 47.325 243 121 3 342 584 554 789 2.15e-67 234
MsG0180005485.01.T01 MTR_2g101720 31.786 280 140 8 60 323 143 387 4.94e-30 126
MsG0180005485.01.T01 MTR_6g477820 45.594 261 117 6 340 584 472 723 1.33e-62 219
MsG0180005485.01.T01 MTR_6g477820 37.829 304 141 10 47 321 21 305 5.28e-45 170
MsG0180005485.01.T01 MTR_5g005600 41.833 251 135 4 336 584 475 716 2.87e-57 205
MsG0180005485.01.T01 MTR_5g005600 33.762 311 169 12 29 323 21 310 1.79e-28 121
MsG0180005485.01.T01 MTR_7g427710 44.800 250 114 8 340 584 408 638 1.08e-51 188
MsG0180005485.01.T01 MTR_7g427710 33.333 282 117 6 54 321 14 238 1.52e-32 133
MsG0180005485.01.T01 MTR_5g029320 39.841 251 143 5 340 584 530 778 2.14e-50 186
MsG0180005485.01.T01 MTR_5g029320 33.129 326 176 9 24 323 57 366 2.37e-45 172
MsG0180005485.01.T01 MTR_2g030570 33.716 261 153 7 331 584 448 695 6.37e-38 149
MsG0180005485.01.T01 MTR_2g030570 26.984 315 161 12 42 322 11 290 7.36e-19 90.9
MsG0180005485.01.T01 MTR_2g083330 37.154 253 143 6 337 584 284 525 1.24e-36 144
MsG0180005485.01.T01 MTR_2g083350 36.328 256 139 8 337 584 292 531 6.83e-35 139
MsG0180005485.01.T01 MTR_7g427700 33.333 282 117 7 54 321 14 238 9.40e-34 134
MsG0180005485.01.T01 MTR_7g427700 45.625 160 73 5 430 584 281 431 3.00e-29 120
MsG0180005485.01.T01 MTR_2g030600 31.128 257 160 6 331 584 446 688 1.58e-33 136
MsG0180005485.01.T01 MTR_2g030600 29.431 299 170 12 42 321 11 287 1.36e-20 96.7
MsG0180005485.01.T01 MTR_2g030690 32.669 251 138 9 343 584 49 277 6.09e-26 108
MsG0180005485.01.T01 MTR_2g030660 32.520 246 145 7 343 584 419 647 2.62e-25 111
MsG0180005485.01.T01 MTR_2g030660 25.658 304 160 12 41 329 3 255 8.00e-13 71.6
MsG0180005485.01.T01 MTR_0653s0020 39.416 137 69 4 340 476 63 185 2.19e-24 101
MsG0180005485.01.T01 MTR_5g046040 46.212 132 52 5 51 166 28 156 3.19e-23 102
MsG0180005485.01.T01 MTR_7g427690 43.220 118 57 3 340 457 305 412 7.36e-23 102
MsG0180005485.01.T01 MTR_0653s0010 46.094 128 45 4 469 585 1 115 3.12e-21 89.7
MsG0180005485.01.T01 MTR_7g027265 42.063 126 49 4 56 163 17 136 4.38e-20 87.4
MsG0180005485.01.T01 MTR_1g105420 30.000 240 137 9 99 337 2 211 2.28e-16 78.6
MsG0180005485.01.T01 MTR_2g101740 59.091 44 18 0 541 584 26 69 3.93e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005485.01.T01 AT3G61150 68.980 245 74 1 343 585 560 804 2.95e-109 346
MsG0180005485.01.T01 AT3G61150 44.928 345 116 11 23 322 80 395 1.42e-74 254
MsG0180005485.01.T01 AT4G00730 67.339 248 74 2 338 585 559 799 5.38e-103 329
MsG0180005485.01.T01 AT4G00730 50.000 328 125 8 12 323 94 398 1.31e-84 281
MsG0180005485.01.T01 AT1G05230 61.600 250 84 2 335 584 479 716 1.09e-96 311
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.59e-54 197
MsG0180005485.01.T01 AT1G05230 61.600 250 84 2 335 584 479 716 1.09e-96 311
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.59e-54 197
MsG0180005485.01.T01 AT1G05230 61.600 250 84 2 335 584 479 716 1.09e-96 311
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.59e-54 197
MsG0180005485.01.T01 AT1G05230 61.600 250 84 2 335 584 479 716 1.09e-96 311
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.59e-54 197
MsG0180005485.01.T01 AT1G05230 61.600 250 84 2 335 584 479 716 1.09e-96 311
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.59e-54 197
MsG0180005485.01.T01 AT1G05230 61.600 250 84 2 335 584 479 716 1.09e-96 311
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.59e-54 197
MsG0180005485.01.T01 AT1G05230 61.600 250 84 2 335 584 479 716 1.09e-96 311
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.59e-54 197
MsG0180005485.01.T01 AT1G05230 61.600 250 84 2 335 584 479 716 1.09e-96 311
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.59e-54 197
MsG0180005485.01.T01 AT1G05230 61.600 250 84 2 335 584 479 716 1.09e-96 311
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.59e-54 197
MsG0180005485.01.T01 AT1G05230 61.600 250 84 2 335 584 479 716 1.09e-96 311
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.59e-54 197
MsG0180005485.01.T01 AT1G05230 61.200 250 83 3 335 584 479 714 4.34e-94 304
MsG0180005485.01.T01 AT1G05230 39.375 320 151 11 20 323 30 322 1.60e-54 197
MsG0180005485.01.T01 AT4G04890 61.355 251 95 2 335 584 486 735 7.64e-94 304
MsG0180005485.01.T01 AT4G04890 38.968 349 154 14 5 331 23 334 1.43e-59 211
MsG0180005485.01.T01 AT4G04890 61.355 251 95 2 335 584 486 735 7.64e-94 304
MsG0180005485.01.T01 AT4G04890 38.968 349 154 14 5 331 23 334 1.43e-59 211
MsG0180005485.01.T01 AT5G52170 59.524 252 92 3 337 586 442 685 5.79e-90 292
MsG0180005485.01.T01 AT5G52170 38.997 359 127 16 1 334 1 292 3.21e-52 190
MsG0180005485.01.T01 AT4G21750 59.091 264 93 2 335 584 495 757 1.16e-89 293
MsG0180005485.01.T01 AT4G21750 36.932 352 155 12 4 323 22 338 8.29e-54 196
MsG0180005485.01.T01 AT4G21750 59.091 264 93 2 335 584 495 757 1.16e-89 293
MsG0180005485.01.T01 AT4G21750 36.932 352 155 12 4 323 22 338 8.29e-54 196
MsG0180005485.01.T01 AT4G21750 59.091 264 93 2 335 584 495 757 1.16e-89 293
MsG0180005485.01.T01 AT4G21750 36.932 352 155 12 4 323 22 338 8.29e-54 196
MsG0180005485.01.T01 AT4G21750 59.091 264 93 2 335 584 495 757 1.16e-89 293
MsG0180005485.01.T01 AT4G21750 36.932 352 155 12 4 323 22 338 8.29e-54 196
MsG0180005485.01.T01 AT5G52170 59.363 251 92 3 338 586 438 680 2.58e-89 290
MsG0180005485.01.T01 AT5G52170 38.997 359 127 16 1 334 1 292 3.33e-52 190
MsG0180005485.01.T01 AT5G52170 59.363 251 92 3 338 586 438 680 2.58e-89 290
MsG0180005485.01.T01 AT5G52170 38.997 359 127 16 1 334 1 292 3.33e-52 190
MsG0180005485.01.T01 AT4G00730 50.000 328 125 8 12 323 94 398 2.68e-86 279
MsG0180005485.01.T01 AT1G73360 47.843 255 111 5 337 584 474 713 1.01e-62 220
MsG0180005485.01.T01 AT1G73360 38.488 291 145 12 55 321 31 311 2.19e-41 160
MsG0180005485.01.T01 AT1G17920 45.935 246 111 4 340 584 457 681 1.94e-62 218
MsG0180005485.01.T01 AT1G17920 36.246 309 160 11 59 345 24 317 1.17e-41 160
MsG0180005485.01.T01 AT1G17920 45.935 246 111 4 340 584 457 681 1.94e-62 218
MsG0180005485.01.T01 AT1G17920 36.246 309 160 11 59 345 24 317 1.17e-41 160
MsG0180005485.01.T01 AT1G79840 44.490 245 129 3 342 586 449 686 2.63e-62 218
MsG0180005485.01.T01 AT1G79840 31.879 298 136 10 48 328 34 281 1.21e-31 130
MsG0180005485.01.T01 AT1G79840 44.490 245 129 3 342 586 449 686 2.63e-62 218
MsG0180005485.01.T01 AT1G79840 31.879 298 136 10 48 328 34 281 1.21e-31 130
MsG0180005485.01.T01 AT1G79840 44.490 245 129 3 342 586 507 744 5.05e-62 218
MsG0180005485.01.T01 AT1G79840 31.879 298 136 10 48 328 92 339 8.08e-32 131
MsG0180005485.01.T01 AT1G79840 44.490 245 129 3 342 586 536 773 2.13e-61 217
MsG0180005485.01.T01 AT1G79840 31.879 298 136 10 48 328 121 368 1.85e-31 130
MsG0180005485.01.T01 AT4G25530 46.559 247 117 4 338 584 451 682 2.59e-59 210
MsG0180005485.01.T01 AT4G25530 28.840 319 153 14 37 331 29 297 4.39e-23 104
MsG0180005485.01.T01 AT2G32370 42.460 252 126 4 331 581 484 717 1.40e-56 203
MsG0180005485.01.T01 AT2G32370 33.742 326 160 12 31 331 40 334 2.18e-39 154
MsG0180005485.01.T01 AT1G05230 39.319 323 153 11 15 321 25 320 1.08e-54 196
MsG0180005485.01.T01 AT1G05230 66.667 126 41 1 335 460 479 603 1.73e-47 176
MsG0180005485.01.T01 AT5G46880 38.211 246 140 5 340 584 572 806 1.04e-47 179
MsG0180005485.01.T01 AT5G46880 32.317 328 162 13 40 322 93 405 9.82e-32 131
MsG0180005485.01.T01 AT5G46880 38.211 246 140 5 340 584 572 806 1.04e-47 179
MsG0180005485.01.T01 AT5G46880 32.317 328 162 13 40 322 93 405 9.82e-32 131
MsG0180005485.01.T01 AT5G46880 38.211 246 140 5 340 584 572 806 1.04e-47 179
MsG0180005485.01.T01 AT5G46880 32.317 328 162 13 40 322 93 405 9.82e-32 131
MsG0180005485.01.T01 AT3G03260 35.361 263 137 7 336 584 451 694 4.09e-37 147
MsG0180005485.01.T01 AT3G03260 26.599 297 188 5 40 321 7 288 5.52e-25 110
MsG0180005485.01.T01 AT4G17710 33.333 246 141 5 340 584 480 703 8.80e-33 134
MsG0180005485.01.T01 AT4G17710 30.249 281 129 8 56 322 88 315 9.84e-26 112
MsG0180005485.01.T01 AT1G79840 31.879 298 136 10 48 328 92 339 4.28e-32 130
MsG0180005485.01.T01 AT1G79840 31.879 298 136 10 48 328 92 339 8.89e-32 130
MsG0180005485.01.T01 AT1G79840 50.435 115 56 1 342 456 507 620 4.65e-31 128
MsG0180005485.01.T01 AT5G17320 35.484 248 139 9 343 585 485 716 7.67e-31 128
MsG0180005485.01.T01 AT5G17320 27.469 324 198 10 35 329 2 317 9.84e-21 97.1
MsG0180005485.01.T01 AT1G34650 32.653 245 147 7 343 584 476 705 1.34e-26 115
MsG0180005485.01.T01 AT1G34650 25.614 285 141 8 46 287 12 268 9.87e-15 78.2
MsG0180005485.01.T01 AT3G03260 26.599 297 188 5 40 321 7 288 6.80e-25 109
MsG0180005485.01.T01 AT5G07260 27.473 182 128 3 337 517 308 486 6.80e-18 87.4
MsG0180005485.01.T01 AT5G07260 27.222 180 127 3 339 517 315 491 2.24e-17 85.9

Find 179 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATAGTCCTGTTTGGATTA+AGG 0.220607 1:-92309466 MsG0180005485.01.T01:CDS
GAAGACTATTCACCAGAATT+TGG 0.222863 1:+92306861 None:intergenic
GTGCTTCATCTGCTAGAAAA+TGG 0.232062 1:-92307638 MsG0180005485.01.T01:CDS
TCAGCATTGCATTAACAAAA+TGG 0.246356 1:+92306738 None:intergenic
TTTGATCTTGAAGGATTATC+TGG 0.248253 1:-92310524 MsG0180005485.01.T01:CDS
TGGTGCTCTTCGAAAATATT+TGG 0.255989 1:+92309816 None:intergenic
ATGACCAACAACTTCTGTTC+TGG 0.284388 1:-92307666 MsG0180005485.01.T01:CDS
GATAGTCCTGTTTGGATTAA+GGG 0.285548 1:-92309465 MsG0180005485.01.T01:CDS
CAGAACAGACACATATGTTT+TGG 0.300815 1:+92306453 None:intergenic
TCCTGTTTGGATTAAGGGTT+TGG 0.303275 1:-92309460 MsG0180005485.01.T01:CDS
CACAGTCGGATTCCAAATTC+TGG 0.317732 1:-92306873 MsG0180005485.01.T01:CDS
TATGTTGCACTCTTGCCTTC+AGG 0.326578 1:-92306995 MsG0180005485.01.T01:CDS
TCAAGCTCTTGAATTTGATT+AGG 0.330233 1:+92310437 None:intergenic
GTTGCACAGTTGTTACATAT+TGG 0.335634 1:+92309858 None:intergenic
CAACTGTGGACCAGCAATTC+TGG 0.342913 1:-92309839 MsG0180005485.01.T01:CDS
GCAACAAAGCCAGCAGGTTT+AGG 0.343857 1:+92309375 None:intergenic
AAATATTTGGCCAGAATTGC+TGG 0.343907 1:+92309829 None:intergenic
CTTGTTTGTTAAGGCATATA+CGG 0.345169 1:+92309754 None:intergenic
CGGTTGATTTCTTCTTGTAT+TGG 0.345564 1:-92309399 MsG0180005485.01.T01:CDS
AACAGTCTTTGTCGTGAAAC+TGG 0.348067 1:+92307498 None:intergenic
GCTCTACCATCCTCAAATTC+TGG 0.354909 1:-92309693 MsG0180005485.01.T01:CDS
GTTTCCTTGCCCTTGACCTT+TGG 0.362517 1:+92307392 None:intergenic
GAGATGGTCGCTTCATGTCC+TGG 0.364109 1:-92309586 MsG0180005485.01.T01:CDS
GGTTATACATTTGGTTGTAT+AGG 0.370890 1:-92306655 MsG0180005485.01.T01:three_prime_UTR
GCCAATGGAATTATGATTCT+CGG 0.372515 1:-92309608 MsG0180005485.01.T01:CDS
TGAGAAAGGGGTTATACATT+TGG 0.376965 1:-92306664 MsG0180005485.01.T01:three_prime_UTR
ACGATACCGGGAGGCTCGCC+AGG 0.388787 1:+92307549 None:intergenic
GTTCAATTCGTCCTTTAGAC+GGG 0.391565 1:+92309776 None:intergenic
GTTGATGTTTCTGTTGAGAT+TGG 0.395535 1:-92309078 MsG0180005485.01.T01:intron
TCTTAGCAAGAGACTTGGTT+TGG 0.395711 1:-92310267 MsG0180005485.01.T01:CDS
GCCAAGGAACTTGTTTGTTA+AGG 0.397859 1:+92309745 None:intergenic
CTTCATGTCCTGGGGATTGA+TGG 0.399537 1:-92309576 MsG0180005485.01.T01:CDS
TTGGCAAACAATATCATCAT+TGG 0.400451 1:-92309727 MsG0180005485.01.T01:CDS
TTCAATGATTGCCCGTCAAC+TGG 0.404111 1:+92307046 None:intergenic
GCTGAAGCTACGAGAGAAAC+CGG 0.410030 1:-92309354 MsG0180005485.01.T01:CDS
AACTGACTCCATTGTGAGCT+TGG 0.411048 1:+92306832 None:intergenic
AACAGCATGCAGAAGGTGTA+TGG 0.413574 1:-92309107 MsG0180005485.01.T01:intron
TGACCAACAACTTCTGTTCT+GGG 0.413733 1:-92307665 MsG0180005485.01.T01:CDS
AGATCTTGCATTGGCTGCTA+TGG 0.415072 1:-92309514 MsG0180005485.01.T01:CDS
GTATGGAAGGAACGGTGGTG+GGG 0.415947 1:-92309659 MsG0180005485.01.T01:CDS
CTCAGACAGATAGTCCTGTT+TGG 0.418832 1:-92309473 MsG0180005485.01.T01:CDS
TTTGTTGAATCAGACTCAAC+TGG 0.422317 1:-92309964 MsG0180005485.01.T01:intron
TGTATTGGTCCTAAACCTGC+TGG 0.422932 1:-92309384 MsG0180005485.01.T01:CDS
AGCGATAACTTTGATCTTGA+AGG 0.423316 1:-92310533 MsG0180005485.01.T01:CDS
CATCACTCAGAGTCCCCATT+TGG 0.425038 1:+92307607 None:intergenic
TTACAGTTGCAACTTGCAAA+TGG 0.427475 1:-92306414 MsG0180005485.01.T01:three_prime_UTR
TTCTGGTCTGGAACTTGGTA+TGG 0.430735 1:-92309676 MsG0180005485.01.T01:CDS
ATACATTTGGTTGTATAGGA+AGG 0.432041 1:-92306651 MsG0180005485.01.T01:three_prime_UTR
TGTATAGGAAGGGTTGCTTA+AGG 0.433860 1:-92306640 MsG0180005485.01.T01:three_prime_UTR
TGCTTCATCTGCTAGAAAAT+GGG 0.434105 1:-92307637 MsG0180005485.01.T01:CDS
AGATGGTCGCTTCATGTCCT+GGG 0.437549 1:-92309585 MsG0180005485.01.T01:CDS
TTAGCGCTGCAACATCTGTT+TGG 0.439034 1:-92307524 MsG0180005485.01.T01:CDS
TCAAATTCTGGTCTGGAACT+TGG 0.441450 1:-92309681 MsG0180005485.01.T01:CDS
AGCTTAGATACTAGTCTGCT+TGG 0.446257 1:-92310593 MsG0180005485.01.T01:CDS
ATGGAGGGGCAGAGTGAGAT+TGG 0.448707 1:-92310629 MsG0180005485.01.T01:CDS
TACAGTTGCAACTTGCAAAT+GGG 0.451118 1:-92306413 MsG0180005485.01.T01:three_prime_UTR
AAGATCAAAGTTATCGCTTC+CGG 0.452078 1:+92310538 None:intergenic
AGCACTTGTGGAAACTTTGA+TGG 0.452399 1:-92309310 MsG0180005485.01.T01:CDS
TATGGAAGGAACGGTGGTGG+GGG 0.453243 1:-92309658 MsG0180005485.01.T01:CDS
ACCATCCTCAAATTCTGGTC+TGG 0.453392 1:-92309688 MsG0180005485.01.T01:CDS
AAAATGGGACAGCCTCCAAA+TGG 0.457660 1:-92307622 MsG0180005485.01.T01:CDS
GGTGGTGCTGGCGATGGTGG+TGG 0.459096 1:-92306905 MsG0180005485.01.T01:CDS
ACATGCTTCTTCTACCAGCT+TGG 0.460496 1:+92307706 None:intergenic
TCCAAACCCTTAATCCAAAC+AGG 0.460668 1:+92309459 None:intergenic
CAAAGTTATCGCTTCCGGAC+CGG 0.465356 1:+92310543 None:intergenic
GCCTTAACAAACAAGTTCCT+TGG 0.469077 1:-92309746 MsG0180005485.01.T01:CDS
TGTTGATTCTGCAAGAAACT+TGG 0.473065 1:-92307102 MsG0180005485.01.T01:CDS
AATCAACAGTTTAGCACTTG+TGG 0.473233 1:-92309322 MsG0180005485.01.T01:CDS
GGCTTTGCAATTGTTCCTGA+TGG 0.475420 1:-92306974 MsG0180005485.01.T01:CDS
TGGTATGGAAGGAACGGTGG+TGG 0.476270 1:-92309661 MsG0180005485.01.T01:CDS
TGCAGCGCTAAGCACGATAC+CGG 0.481258 1:+92307536 None:intergenic
AAGTTCCAGACCAGAATTTG+AGG 0.483874 1:+92309683 None:intergenic
TCTGGCTACGGCATGTCAAA+TGG 0.484409 1:-92306941 MsG0180005485.01.T01:CDS
GATGACCCTGGCGAGCCTCC+CGG 0.485077 1:-92307555 MsG0180005485.01.T01:CDS
AGGAAAATGACAAGCTAAGA+GGG 0.487415 1:-92309914 MsG0180005485.01.T01:CDS
GTGGTGTATGCACCAGTTGA+CGG 0.489013 1:-92307058 MsG0180005485.01.T01:CDS
AAATGGGACAGCCTCCAAAT+GGG 0.490793 1:-92307621 MsG0180005485.01.T01:CDS
GGTTCAATTCGTCCTTTAGA+CGG 0.491156 1:+92309775 None:intergenic
AATTGAAAAGCCCCGTCTAA+AGG 0.492034 1:-92309787 MsG0180005485.01.T01:CDS
GGTATGGAAGGAACGGTGGT+GGG 0.493615 1:-92309660 MsG0180005485.01.T01:CDS
AGGATTATCTGGTGATGATC+AGG 0.493656 1:-92310513 MsG0180005485.01.T01:CDS
GTTTGGATTAAGGGTTTGGA+TGG 0.496569 1:-92309456 MsG0180005485.01.T01:CDS
ACTGTTGATTATTACTATCC+CGG 0.497411 1:+92309335 None:intergenic
TTTGCAAGTTGCAACTGTAA+AGG 0.500669 1:+92306417 None:intergenic
GATGAGTATGAAAGCCGGTC+CGG 0.502821 1:-92310557 MsG0180005485.01.T01:CDS
TAGGAAGGGTTGCTTAAGGA+AGG 0.502861 1:-92306636 MsG0180005485.01.T01:three_prime_UTR
CACTCAGAGTCCCCATTTGG+AGG 0.506413 1:+92307610 None:intergenic
CCTTGGCAATCCTTTGCCAA+TGG 0.507051 1:-92309623 MsG0180005485.01.T01:CDS
TGATGTTCAGCTTGAGAGAT+CGG 0.507347 1:-92309544 MsG0180005485.01.T01:CDS
ATATTGAATCAAGAAGAGTA+TGG 0.509859 1:-92309423 MsG0180005485.01.T01:CDS
CAGAGTGAGATTGGTCTCAC+TGG 0.512660 1:-92310620 MsG0180005485.01.T01:CDS
GGTAATGATCCCTCTGGCTA+CGG 0.514599 1:-92306953 MsG0180005485.01.T01:CDS
TATGGATGAATTATTAAAGA+TGG 0.515193 1:-92309496 MsG0180005485.01.T01:CDS
TACATTTGGTTGTATAGGAA+GGG 0.515297 1:-92306650 MsG0180005485.01.T01:three_prime_UTR
TGAGAACATAATGCTTAGGC+AGG 0.515881 1:-92309934 MsG0180005485.01.T01:CDS
GCTTAGATACTAGTCTGCTT+GGG 0.516578 1:-92310592 MsG0180005485.01.T01:CDS
TAGAAGAAGCATGTTGAAGC+TGG 0.521232 1:-92307697 MsG0180005485.01.T01:CDS
AAAGGTGGTGCTGGCGATGG+TGG 0.526742 1:-92306908 MsG0180005485.01.T01:CDS
TGCAGCTTTGATCTTCTGAA+TGG 0.531714 1:+92306781 None:intergenic
TCCGAGAATCATAATTCCAT+TGG 0.535753 1:+92309607 None:intergenic
GTTCACATTGCCAAAGGTCA+AGG 0.536772 1:-92307402 MsG0180005485.01.T01:CDS
GGATACATCTTGCTCGGTGG+TGG 0.536827 1:-92307077 MsG0180005485.01.T01:CDS
TTTGCAGCATTGAGCCAAGC+TGG 0.536871 1:-92307720 MsG0180005485.01.T01:intron
CAGGAAAATGACAAGCTAAG+AGG 0.541163 1:-92309915 MsG0180005485.01.T01:CDS
ATGAAAGGCTTAGAAGCGAG+TGG 0.543168 1:-92307461 MsG0180005485.01.T01:CDS
CCAGAGGGATCATTACCATC+AGG 0.544598 1:+92306959 None:intergenic
AACCCCAGAACAGAAGTTGT+TGG 0.545437 1:+92307662 None:intergenic
AATCATAATTCCATTGGCAA+AGG 0.546159 1:+92309613 None:intergenic
GGTGGAAGTTTGCTCACAGT+CGG 0.546541 1:-92306887 MsG0180005485.01.T01:CDS
GGCTCTAATAGATCTTGCAT+TGG 0.550601 1:-92309523 MsG0180005485.01.T01:CDS
AATGATGATATTGTTTGCCA+AGG 0.552877 1:+92309729 None:intergenic
TTTGAGGATGGTAGAGCCAT+GGG 0.555597 1:+92309699 None:intergenic
GTGATGATGGTCAGCGCAAG+AGG 0.555699 1:-92310484 MsG0180005485.01.T01:CDS
ATCATCATTGGCTAATCCCA+TGG 0.556384 1:-92309715 MsG0180005485.01.T01:CDS
GATCAGGATGGTGGTGATGA+TGG 0.558173 1:-92310497 MsG0180005485.01.T01:CDS
AATGTGAACCATCTCTTGCA+TGG 0.559591 1:+92307416 None:intergenic
TCAAATGGTACTTTACAGAA+AGG 0.561442 1:-92306926 MsG0180005485.01.T01:CDS
CCTGATGGTAATGATCCCTC+TGG 0.562249 1:-92306959 MsG0180005485.01.T01:CDS
TGGTGTATGCACCAGTTGAC+GGG 0.562286 1:-92307057 MsG0180005485.01.T01:CDS
GGCATGAGAACATAATGCTT+AGG 0.566863 1:-92309938 MsG0180005485.01.T01:CDS
CAGAAAGGTGGTGCTGGCGA+TGG 0.567714 1:-92306911 MsG0180005485.01.T01:CDS
ATGTGAACCATCTCTTGCAT+GGG 0.567812 1:+92307417 None:intergenic
GCTTCAGCAACAAAGCCAGC+AGG 0.568459 1:+92309369 None:intergenic
TCCATTGTGAGCTTGGCAGT+TGG 0.569368 1:+92306839 None:intergenic
TTGGATCTTAGCAAGAGACT+TGG 0.569590 1:-92310272 MsG0180005485.01.T01:CDS
ATTTGAGGATGGTAGAGCCA+TGG 0.573157 1:+92309698 None:intergenic
ACTTTACAGAAAGGTGGTGC+TGG 0.574608 1:-92306917 MsG0180005485.01.T01:CDS
GGAATTATGATTCTCGGAGA+TGG 0.576310 1:-92309602 MsG0180005485.01.T01:CDS
TACTACTTCCATCAATCCCC+AGG 0.581268 1:+92309568 None:intergenic
GGTCTGGAACTTGGTATGGA+AGG 0.584744 1:-92309672 MsG0180005485.01.T01:CDS
TTGGATGGATACATCTTGCT+CGG 0.589147 1:-92307083 MsG0180005485.01.T01:CDS
TGGTGGACCCATGCAAGAGA+TGG 0.592249 1:-92307424 MsG0180005485.01.T01:CDS
GATTCTGCAAGAAACTTGGA+TGG 0.592935 1:-92307098 MsG0180005485.01.T01:CDS
GACCAACAACTTCTGTTCTG+GGG 0.596269 1:-92307664 MsG0180005485.01.T01:CDS
GGAACTCGTGGCGTTGCTGA+TGG 0.596588 1:-92306584 MsG0180005485.01.T01:three_prime_UTR
GGAACAATTGCAAAGCCTGA+AGG 0.597670 1:+92306980 None:intergenic
TCCAGACCAGAATTTGAGGA+TGG 0.597964 1:+92309687 None:intergenic
GCAGCGCTAAGCACGATACC+GGG 0.598314 1:+92307537 None:intergenic
ACAGCATGCAGAAGGTGTAT+GGG 0.603251 1:-92309106 MsG0180005485.01.T01:intron
CAAGTTGCAACTGTAAAGGA+CGG 0.603277 1:+92306421 None:intergenic
TAGCATGATGAAAGAAGCAA+TGG 0.604769 1:-92309886 MsG0180005485.01.T01:CDS
TGCAGAAGGTGTATGGGCCG+TGG 0.605614 1:-92309100 MsG0180005485.01.T01:CDS
GAATGCAAAGACTAACTCGC+AGG 0.606002 1:+92306488 None:intergenic
TTGAATGTGGTGATGAGTGG+TGG 0.609782 1:-92307028 MsG0180005485.01.T01:CDS
CTGAAGCTACGAGAGAAACC+GGG 0.615105 1:-92309353 MsG0180005485.01.T01:CDS
TGTGGAAACTTTGATGGATG+CGG 0.616357 1:-92309304 MsG0180005485.01.T01:intron
GTTCTGTAACAGCATGCAGA+AGG 0.617436 1:-92309114 MsG0180005485.01.T01:intron
TCCAACTGCCAAGCTCACAA+TGG 0.619453 1:-92306840 MsG0180005485.01.T01:CDS
TGAATCAGACTCAACTGGAA+AGG 0.621264 1:-92309959 MsG0180005485.01.T01:intron
GAGAGGATGAGTATGAAAGC+CGG 0.622277 1:-92310562 MsG0180005485.01.T01:CDS
TTCACATTGCCAAAGGTCAA+GGG 0.624942 1:-92307401 MsG0180005485.01.T01:CDS
ATGACATGAGAGTTATGACT+AGG 0.627138 1:-92307587 MsG0180005485.01.T01:CDS
ATTTGACATGCCGTAGCCAG+AGG 0.627533 1:+92306943 None:intergenic
GGAACTTGGTATGGAAGGAA+CGG 0.630373 1:-92309667 MsG0180005485.01.T01:CDS
ATTGCCAAAGGTCAAGGGCA+AGG 0.631892 1:-92307396 MsG0180005485.01.T01:CDS
TGAATCAAGAAGAGTATGGA+CGG 0.632793 1:-92309419 MsG0180005485.01.T01:CDS
TTCAATTCGTCCTTTAGACG+GGG 0.633706 1:+92309777 None:intergenic
TTTGATTAGGAGTGTGTCTG+TGG 0.637619 1:+92310450 None:intergenic
TTTGACATGCCGTAGCCAGA+GGG 0.639169 1:+92306944 None:intergenic
TGAAAGGCTTAGAAGCGAGT+GGG 0.641966 1:-92307460 MsG0180005485.01.T01:CDS
ATGTAACAACTGTGCAACTG+TGG 0.643327 1:-92309853 MsG0180005485.01.T01:CDS
CCATTGGCAAAGGATTGCCA+AGG 0.644491 1:+92309623 None:intergenic
AATGGGACAGCCTCCAAATG+GGG 0.646605 1:-92307620 MsG0180005485.01.T01:CDS
GATGGTCGCTTCATGTCCTG+GGG 0.649187 1:-92309584 MsG0180005485.01.T01:CDS
AATGGTACTTTACAGAAAGG+TGG 0.653820 1:-92306923 MsG0180005485.01.T01:CDS
GAGATGGTTCACATTGCCAA+AGG 0.654763 1:-92307408 MsG0180005485.01.T01:CDS
CGATACCGGGAGGCTCGCCA+GGG 0.655976 1:+92307550 None:intergenic
CTCAACAGAAACATCAACCA+CGG 0.657444 1:+92309083 None:intergenic
TCTGCTTGGGAGAATGAGAG+AGG 0.661619 1:-92310579 MsG0180005485.01.T01:CDS
TCATTGAATGTGGTGATGAG+TGG 0.663206 1:-92307031 MsG0180005485.01.T01:CDS
CATTGGCAAAGGATTGCCAA+GGG 0.664195 1:+92309624 None:intergenic
GCGCTAAGCACGATACCGGG+AGG 0.668252 1:+92307540 None:intergenic
GATGGATACATCTTGCTCGG+TGG 0.691053 1:-92307080 MsG0180005485.01.T01:CDS
ACTTGGTATGGAAGGAACGG+TGG 0.696347 1:-92309664 MsG0180005485.01.T01:CDS
GGAAAATGACAAGCTAAGAG+GGG 0.705532 1:-92309913 MsG0180005485.01.T01:CDS
TAAAACTTACATTAGCACGA+AGG 0.708878 1:+92307358 None:intergenic
TGACGGGCAATCATTGAATG+TGG 0.709763 1:-92307041 MsG0180005485.01.T01:CDS
TCTGGTGATGATCAGGATGG+TGG 0.726600 1:-92310506 MsG0180005485.01.T01:CDS
TTATCTGGTGATGATCAGGA+TGG 0.778846 1:-92310509 MsG0180005485.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACAAAAAGAAATAAAA+TGG + Chr1:92306607-92306626 None:intergenic 10.0%
!!! AAACAAATATTTTATACTAA+AGG + Chr1:92308621-92308640 None:intergenic 10.0%
!!! AACAAATATTTTTATACTAA+AGG + Chr1:92308396-92308415 None:intergenic 10.0%
!! AAAATAAACAAGTAAAATTC+TGG - Chr1:92306750-92306769 MsG0180005485.01.T01:exon 15.0%
!! ATCTGTCTAATTATATTAAA+AGG + Chr1:92308511-92308530 None:intergenic 15.0%
!!! AAATAGAATAAGTTGAAATA+AGG - Chr1:92308119-92308138 MsG0180005485.01.T01:intron 15.0%
!!! CTTTTTATTGTTCATTTATT+TGG - Chr1:92310625-92310644 MsG0180005485.01.T01:CDS 15.0%
!!! TATAATTTATAATTAGCCTA+GGG - Chr1:92308895-92308914 MsG0180005485.01.T01:intron 15.0%
!!! TTATAATTTATAATTAGCCT+AGG - Chr1:92308894-92308913 MsG0180005485.01.T01:intron 15.0%
!!! TTTTAAAAGAAAATGAAACA+TGG + Chr1:92306817-92306836 None:intergenic 15.0%
!!! TTTTTGTTATTAAACTAATG+TGG - Chr1:92306616-92306635 MsG0180005485.01.T01:three_prime_UTR 15.0%
!!! TTTTTTTACTTGTTTTACTT+GGG - Chr1:92308175-92308194 MsG0180005485.01.T01:intron 15.0%
!! ACAAAATTTCCTATCAAAAT+CGG + Chr1:92307761-92307780 None:intergenic 20.0%
!! CGAATGCTATATAAATATAA+TGG - Chr1:92308461-92308480 MsG0180005485.01.T01:intron 20.0%
!! CTAATTAAATGGTGTAAATT+TGG - Chr1:92309242-92309261 MsG0180005485.01.T01:intron 20.0%
!! CTTGTTAACTACTAATTAAA+TGG - Chr1:92309231-92309250 MsG0180005485.01.T01:intron 20.0%
!! TATGGATGAATTATTAAAGA+TGG - Chr1:92307498-92307517 MsG0180005485.01.T01:CDS 20.0%
!! TTTAATTACCATCAAAGTTT+CGG - Chr1:92307815-92307834 MsG0180005485.01.T01:intron 20.0%
!! TTTCATGATCTTTGATATTA+TGG + Chr1:92306925-92306944 None:intergenic 20.0%
!!! GGTTTTATTAATTTTTGAAC+TGG - Chr1:92310307-92310326 MsG0180005485.01.T01:CDS 20.0%
!!! GTTTTTTTACTTGTTTTACT+TGG - Chr1:92308174-92308193 MsG0180005485.01.T01:intron 20.0%
!!! TGCATGAAAATTTTAAATCT+TGG - Chr1:92308317-92308336 MsG0180005485.01.T01:intron 20.0%
! AAAAACAAGTTCACAAAACA+AGG + Chr1:92310286-92310305 None:intergenic 25.0%
! ATATTGAATCAAGAAGAGTA+TGG - Chr1:92307571-92307590 MsG0180005485.01.T01:CDS 25.0%
! ATTTAATCTTCACCTTCATT+TGG + Chr1:92306793-92306812 None:intergenic 25.0%
! CGTATGTAAGATGTTTATAT+AGG + Chr1:92308866-92308885 None:intergenic 25.0%
! GCTATAGAGATTTCATAAAT+AGG - Chr1:92309689-92309708 MsG0180005485.01.T01:CDS 25.0%
! TTTAATCTTCACCTTCATTT+GGG + Chr1:92306792-92306811 None:intergenic 25.0%
!! ACGTATGATTTGGATTTAAA+TGG + Chr1:92309667-92309686 None:intergenic 25.0%
!! GATGTGTTTTCTTCTTTTAA+TGG - Chr1:92306649-92306668 MsG0180005485.01.T01:three_prime_UTR 25.0%
!!! GTAATTTAACCGATTTTGAT+AGG - Chr1:92307749-92307768 MsG0180005485.01.T01:intron 25.0%
!!! TGTTTTGTGAACTTGTTTTT+TGG - Chr1:92310286-92310305 MsG0180005485.01.T01:CDS 25.0%
AAACTTGTATAGCACTTACT+TGG + Chr1:92308026-92308045 None:intergenic 30.0%
AAATTACAAAGAAGACCAAG+AGG + Chr1:92307736-92307755 None:intergenic 30.0%
AAATTGATACAGATGTCAGA+AGG + Chr1:92308827-92308846 None:intergenic 30.0%
AATCATAATTCCATTGGCAA+AGG + Chr1:92307384-92307403 None:intergenic 30.0%
AATGATGATATTGTTTGCCA+AGG + Chr1:92307268-92307287 None:intergenic 30.0%
AGAATAAGTTGCATTGTTGT+AGG - Chr1:92308987-92309006 MsG0180005485.01.T01:intron 30.0%
ATACATTTGGTTGTATAGGA+AGG - Chr1:92310343-92310362 MsG0180005485.01.T01:intron 30.0%
CTATATCACTCAGAAAATGT+TGG + Chr1:92307786-92307805 None:intergenic 30.0%
GGTTATACATTTGGTTGTAT+AGG - Chr1:92310339-92310358 MsG0180005485.01.T01:intron 30.0%
TAAAACTTACATTAGCACGA+AGG + Chr1:92309639-92309658 None:intergenic 30.0%
TACATTTGGTTGTATAGGAA+GGG - Chr1:92310344-92310363 MsG0180005485.01.T01:intron 30.0%
TATAATTGCAACGAGTATGT+TGG - Chr1:92308956-92308975 MsG0180005485.01.T01:intron 30.0%
TCAAATGGTACTTTACAGAA+AGG - Chr1:92310068-92310087 MsG0180005485.01.T01:intron 30.0%
TCAAGCTCTTGAATTTGATT+AGG + Chr1:92306560-92306579 None:intergenic 30.0%
TCAGCATTGCATTAACAAAA+TGG + Chr1:92310259-92310278 None:intergenic 30.0%
TCTATAGCTAACGTATGATT+TGG + Chr1:92309677-92309696 None:intergenic 30.0%
TCTCATAAAACCAACTTACA+AGG + Chr1:92309738-92309757 None:intergenic 30.0%
TTATCAAATACTCAACCTCT+TGG - Chr1:92307718-92307737 MsG0180005485.01.T01:intron 30.0%
TTATGAGATTGAGTTAGGAT+CGG - Chr1:92309750-92309769 MsG0180005485.01.T01:CDS 30.0%
TTGGCAAACAATATCATCAT+TGG - Chr1:92307267-92307286 MsG0180005485.01.T01:intron 30.0%
TTTGATCTTGAAGGATTATC+TGG - Chr1:92306470-92306489 MsG0180005485.01.T01:three_prime_UTR 30.0%
! AATTTTTGAACTGGTGAGAA+AGG - Chr1:92310316-92310335 MsG0180005485.01.T01:intron 30.0%
! ACTGTTGATTATTACTATCC+CGG + Chr1:92307662-92307681 None:intergenic 30.0%
! ATTAAACTAATGTGGTTCTG+TGG - Chr1:92306624-92306643 MsG0180005485.01.T01:three_prime_UTR 30.0%
! ATTTTTGAACTGGTGAGAAA+GGG - Chr1:92310317-92310336 MsG0180005485.01.T01:intron 30.0%
! CTTGTTTGTTAAGGCATATA+CGG + Chr1:92307243-92307262 None:intergenic 30.0%
! TTTTTAATGTCTTCGCAACA+AGG - Chr1:92306870-92306889 MsG0180005485.01.T01:CDS 30.0%
!! AACAAGTTTTCTAGTAATGG+TGG - Chr1:92310463-92310482 MsG0180005485.01.T01:CDS 30.0%
!! GCAAACAAGTTTTCTAGTAA+TGG - Chr1:92310460-92310479 MsG0180005485.01.T01:CDS 30.0%
!!! CTTATTTCTGGTTTTGGATT+TGG - Chr1:92309072-92309091 MsG0180005485.01.T01:intron 30.0%
!!! GGTTTTTTGTAGTTTCTTCA+AGG - Chr1:92306670-92306689 MsG0180005485.01.T01:three_prime_UTR 30.0%
!!! TGGTTTTATGAGATTGAGTT+AGG - Chr1:92309745-92309764 MsG0180005485.01.T01:CDS 30.0%
AAACAATCCTCCTTGTAAGT+TGG - Chr1:92309725-92309744 MsG0180005485.01.T01:CDS 35.0%
AAATATTTGGCCAGAATTGC+TGG + Chr1:92307168-92307187 None:intergenic 35.0%
AAATGTTGACATAATGCCCT+AGG + Chr1:92308914-92308933 None:intergenic 35.0%
AAGATCAAAGTTATCGCTTC+CGG + Chr1:92306459-92306478 None:intergenic 35.0%
AAGTCTTCTACAGCTTATGA+TGG + Chr1:92307963-92307982 None:intergenic 35.0%
AATCAACAGTTTAGCACTTG+TGG - Chr1:92307672-92307691 MsG0180005485.01.T01:CDS 35.0%
AATGGTACTTTACAGAAAGG+TGG - Chr1:92310071-92310090 MsG0180005485.01.T01:intron 35.0%
ACTTACTTGGAGTAACCATT+TGG + Chr1:92308013-92308032 None:intergenic 35.0%
AGATAGTCCTGTTTGGATTA+AGG - Chr1:92307528-92307547 MsG0180005485.01.T01:CDS 35.0%
AGCGATAACTTTGATCTTGA+AGG - Chr1:92306461-92306480 MsG0180005485.01.T01:three_prime_UTR 35.0%
AGGAAAATGACAAGCTAAGA+GGG - Chr1:92307080-92307099 MsG0180005485.01.T01:CDS 35.0%
ATGACATGAGAGTTATGACT+AGG - Chr1:92309407-92309426 MsG0180005485.01.T01:CDS 35.0%
ATTGTTGCAGATATGCCAAA+TGG - Chr1:92307995-92308014 MsG0180005485.01.T01:intron 35.0%
CATAAAACCAACTTACAAGG+AGG + Chr1:92309735-92309754 None:intergenic 35.0%
CCAAAACCAGAAATAAGCAA+CGG + Chr1:92309069-92309088 None:intergenic 35.0%
CCTGCAAAAACAAAGATTCT+TGG + Chr1:92309848-92309867 None:intergenic 35.0%
CTCATCCTGATGAAAAACAA+AGG - Chr1:92306699-92306718 MsG0180005485.01.T01:three_prime_UTR 35.0%
GAAGACTATTCACCAGAATT+TGG + Chr1:92310136-92310155 None:intergenic 35.0%
GATAGTCCTGTTTGGATTAA+GGG - Chr1:92307529-92307548 MsG0180005485.01.T01:CDS 35.0%
GCCAATGGAATTATGATTCT+CGG - Chr1:92307386-92307405 MsG0180005485.01.T01:CDS 35.0%
GTTGCACAGTTGTTACATAT+TGG + Chr1:92307139-92307158 None:intergenic 35.0%
TACAGTTGCAACTTGCAAAT+GGG - Chr1:92310581-92310600 MsG0180005485.01.T01:CDS 35.0%
TAGCATGATGAAAGAAGCAA+TGG - Chr1:92307108-92307127 MsG0180005485.01.T01:CDS 35.0%
TATGATGGTTGTGCATTAGA+AGG + Chr1:92307948-92307967 None:intergenic 35.0%
TCCGAGAATCATAATTCCAT+TGG + Chr1:92307390-92307409 None:intergenic 35.0%
TCCTAGAGATTAGTGAATCA+AGG - Chr1:92308239-92308258 MsG0180005485.01.T01:intron 35.0%
TCCTGATGAAAAACAAAGGT+TGG - Chr1:92306703-92306722 MsG0180005485.01.T01:three_prime_UTR 35.0%
TGAGAAAGGGGTTATACATT+TGG - Chr1:92310330-92310349 MsG0180005485.01.T01:intron 35.0%
TGCTTCATCTGCTAGAAAAT+GGG - Chr1:92309357-92309376 MsG0180005485.01.T01:CDS 35.0%
TGGAGAATCACAAACAAATG+CGG + Chr1:92306905-92306924 None:intergenic 35.0%
TGGTGCTCTTCGAAAATATT+TGG + Chr1:92307181-92307200 None:intergenic 35.0%
TTACAGTTGCAACTTGCAAA+TGG - Chr1:92310580-92310599 MsG0180005485.01.T01:CDS 35.0%
TTTGCAAGTTGCAACTGTAA+AGG + Chr1:92310580-92310599 None:intergenic 35.0%
TTTGTTGAATCAGACTCAAC+TGG - Chr1:92307030-92307049 MsG0180005485.01.T01:CDS 35.0%
! CAGAACAGACACATATGTTT+TGG + Chr1:92310544-92310563 None:intergenic 35.0%
! CGGTTGATTTCTTCTTGTAT+TGG - Chr1:92307595-92307614 MsG0180005485.01.T01:CDS 35.0%
! CTACCAAAAACTGATTTCTC+AGG + Chr1:92308155-92308174 None:intergenic 35.0%
! GTTGATGTTTCTGTTGAGAT+TGG - Chr1:92307916-92307935 MsG0180005485.01.T01:intron 35.0%
! TGAATCAAGAAGAGTATGGA+CGG - Chr1:92307575-92307594 MsG0180005485.01.T01:CDS 35.0%
! TTGATTTTCTGCGTGATGAA+AGG - Chr1:92309518-92309537 MsG0180005485.01.T01:CDS 35.0%
! TTGCCTGAGAAATCAGTTTT+TGG - Chr1:92308149-92308168 MsG0180005485.01.T01:intron 35.0%
! TTTTTGAACTGGTGAGAAAG+GGG - Chr1:92310318-92310337 MsG0180005485.01.T01:intron 35.0%
!! ATTGAGTTAGGATCGGTTTT+GGG - Chr1:92309757-92309776 MsG0180005485.01.T01:CDS 35.0%
!! GTTTTCTAGTAATGGTGGTT+CGG - Chr1:92310468-92310487 MsG0180005485.01.T01:CDS 35.0%
!! TGTTGATTCTGCAAGAAACT+TGG - Chr1:92309892-92309911 MsG0180005485.01.T01:CDS 35.0%
!! TTTTCTAGTAATGGTGGTTC+GGG - Chr1:92310469-92310488 MsG0180005485.01.T01:CDS 35.0%
!!! ATGCACGTGATTTGTTTTAC+CGG + Chr1:92309183-92309202 None:intergenic 35.0%
!!! CCAAGAATCTTTGTTTTTGC+AGG - Chr1:92309845-92309864 MsG0180005485.01.T01:CDS 35.0%
!!! CTTTGTTTTTCATCAGGATG+AGG + Chr1:92306701-92306720 None:intergenic 35.0%
!!! TCCAACCTTTGTTTTTCATC+AGG + Chr1:92306707-92306726 None:intergenic 35.0%
AACAGTCTTTGTCGTGAAAC+TGG + Chr1:92309499-92309518 None:intergenic 40.0%
AAGTTCCAGACCAGAATTTG+AGG + Chr1:92307314-92307333 None:intergenic 40.0%
AATGTGAACCATCTCTTGCA+TGG + Chr1:92309581-92309600 None:intergenic 40.0%
AATTGAAAAGCCCCGTCTAA+AGG - Chr1:92307207-92307226 MsG0180005485.01.T01:intron 40.0%
ACAAACTGCCGAAACTTTGA+TGG + Chr1:92307826-92307845 None:intergenic 40.0%
AGCACTTGTGGAAACTTTGA+TGG - Chr1:92307684-92307703 MsG0180005485.01.T01:CDS 40.0%
ATCTCAAACGATGATCACAC+CGG - Chr1:92309161-92309180 MsG0180005485.01.T01:intron 40.0%
ATGACCAACAACTTCTGTTC+TGG - Chr1:92309328-92309347 MsG0180005485.01.T01:CDS 40.0%
ATGTAACAACTGTGCAACTG+TGG - Chr1:92307141-92307160 MsG0180005485.01.T01:intron 40.0%
ATGTGAACCATCTCTTGCAT+GGG + Chr1:92309580-92309599 None:intergenic 40.0%
CAAGTTGCAACTGTAAAGGA+CGG + Chr1:92310576-92310595 None:intergenic 40.0%
CAGGAAAATGACAAGCTAAG+AGG - Chr1:92307079-92307098 MsG0180005485.01.T01:CDS 40.0%
CTATAATCTGCCAAGTGTGT+CGG - Chr1:92308788-92308807 MsG0180005485.01.T01:intron 40.0%
CTCAACAGAAACATCAACCA+CGG + Chr1:92307914-92307933 None:intergenic 40.0%
GATTCTGCAAGAAACTTGGA+TGG - Chr1:92309896-92309915 MsG0180005485.01.T01:CDS 40.0%
GCCTTAACAAACAAGTTCCT+TGG - Chr1:92307248-92307267 MsG0180005485.01.T01:intron 40.0%
GCCTTGATTCACTAATCTCT+AGG + Chr1:92308243-92308262 None:intergenic 40.0%
GGAAAATGACAAGCTAAGAG+GGG - Chr1:92307081-92307100 MsG0180005485.01.T01:CDS 40.0%
GGAATTATGATTCTCGGAGA+TGG - Chr1:92307392-92307411 MsG0180005485.01.T01:CDS 40.0%
GGCATGAGAACATAATGCTT+AGG - Chr1:92307056-92307075 MsG0180005485.01.T01:CDS 40.0%
GGTTCAATTCGTCCTTTAGA+CGG + Chr1:92307222-92307241 None:intergenic 40.0%
GTGCTTCATCTGCTAGAAAA+TGG - Chr1:92309356-92309375 MsG0180005485.01.T01:CDS 40.0%
GTTCAATTCGTCCTTTAGAC+GGG + Chr1:92307221-92307240 None:intergenic 40.0%
GTTTGGATTAAGGGTTTGGA+TGG - Chr1:92307538-92307557 MsG0180005485.01.T01:CDS 40.0%
TACAGATGTCAGAAGGATAG+AGG + Chr1:92308820-92308839 None:intergenic 40.0%
TATAATCTGCCAAGTGTGTC+GGG - Chr1:92308789-92308808 MsG0180005485.01.T01:intron 40.0%
TATCGTCCGTTGCTTATTTC+TGG - Chr1:92309060-92309079 MsG0180005485.01.T01:intron 40.0%
TCCAAACCCTTAATCCAAAC+AGG + Chr1:92307538-92307557 None:intergenic 40.0%
TCCTGTTTGGATTAAGGGTT+TGG - Chr1:92307534-92307553 MsG0180005485.01.T01:CDS 40.0%
TGAATCAGACTCAACTGGAA+AGG - Chr1:92307035-92307054 MsG0180005485.01.T01:CDS 40.0%
TGACCAACAACTTCTGTTCT+GGG - Chr1:92309329-92309348 MsG0180005485.01.T01:CDS 40.0%
TGAGAACATAATGCTTAGGC+AGG - Chr1:92307060-92307079 MsG0180005485.01.T01:CDS 40.0%
TGATGTTCAGCTTGAGAGAT+CGG - Chr1:92307450-92307469 MsG0180005485.01.T01:CDS 40.0%
TGTATAGGAAGGGTTGCTTA+AGG - Chr1:92310354-92310373 MsG0180005485.01.T01:intron 40.0%
TTCAATTCGTCCTTTAGACG+GGG + Chr1:92307220-92307239 None:intergenic 40.0%
TTCACATTGCCAAAGGTCAA+GGG - Chr1:92309593-92309612 MsG0180005485.01.T01:CDS 40.0%
TTCGTCAAGTGAGAATCCTT+CGG - Chr1:92307858-92307877 MsG0180005485.01.T01:intron 40.0%
TTGCATTGTTGTAGGTCACT+TGG - Chr1:92308995-92309014 MsG0180005485.01.T01:intron 40.0%
TTGGATCTTAGCAAGAGACT+TGG - Chr1:92306722-92306741 MsG0180005485.01.T01:three_prime_UTR 40.0%
TTGGATGGATACATCTTGCT+CGG - Chr1:92309911-92309930 MsG0180005485.01.T01:CDS 40.0%
! AGCTTAGATACTAGTCTGCT+TGG - Chr1:92306401-92306420 MsG0180005485.01.T01:three_prime_UTR 40.0%
! AGGATTATCTGGTGATGATC+AGG - Chr1:92306481-92306500 MsG0180005485.01.T01:three_prime_UTR 40.0%
! ATCATCATTGGCTAATCCCA+TGG - Chr1:92307279-92307298 MsG0180005485.01.T01:intron 40.0%
! ATCATCGTTTGAGATGGAAG+AGG + Chr1:92309156-92309175 None:intergenic 40.0%
! GAGTGGGACATTTTGTCTAA+TGG - Chr1:92309550-92309569 MsG0180005485.01.T01:CDS 40.0%
! GCCAAGGAACTTGTTTGTTA+AGG + Chr1:92307252-92307271 None:intergenic 40.0%
! GCTTAGATACTAGTCTGCTT+GGG - Chr1:92306402-92306421 MsG0180005485.01.T01:three_prime_UTR 40.0%
! GGCTCTAATAGATCTTGCAT+TGG - Chr1:92307471-92307490 MsG0180005485.01.T01:CDS 40.0%
! GGGGCTTTTCAATTCTAATC+TGG + Chr1:92307201-92307220 None:intergenic 40.0%
! TAGAAGAAGCATGTTGAAGC+TGG - Chr1:92309297-92309316 MsG0180005485.01.T01:intron 40.0%
! TCAAATTCTGGTCTGGAACT+TGG - Chr1:92307313-92307332 MsG0180005485.01.T01:intron 40.0%
! TCATTGAATGTGGTGATGAG+TGG - Chr1:92309963-92309982 MsG0180005485.01.T01:intron 40.0%
! TCTTAGCAAGAGACTTGGTT+TGG - Chr1:92306727-92306746 MsG0180005485.01.T01:three_prime_UTR 40.0%
! TGCAGCTTTGATCTTCTGAA+TGG + Chr1:92310216-92310235 None:intergenic 40.0%
! TGGGACATTTTGTCTAATGG+TGG - Chr1:92309553-92309572 MsG0180005485.01.T01:CDS 40.0%
! TGTGGAAACTTTGATGGATG+CGG - Chr1:92307690-92307709 MsG0180005485.01.T01:CDS 40.0%
! TTATCTGGTGATGATCAGGA+TGG - Chr1:92306485-92306504 MsG0180005485.01.T01:three_prime_UTR 40.0%
! TTTGATTAGGAGTGTGTCTG+TGG + Chr1:92306547-92306566 None:intergenic 40.0%
!! AGGAAAAATGTTGATGACCC+TGG - Chr1:92309427-92309446 MsG0180005485.01.T01:CDS 40.0%
!! ATCTCTAGGAGTACTAGAAG+TGG + Chr1:92308229-92308248 None:intergenic 40.0%
!! GATTGAGTTAGGATCGGTTT+TGG - Chr1:92309756-92309775 MsG0180005485.01.T01:CDS 40.0%
!!! CCGTTGCTTATTTCTGGTTT+TGG - Chr1:92309066-92309085 MsG0180005485.01.T01:intron 40.0%
AAAATGGGACAGCCTCCAAA+TGG - Chr1:92309372-92309391 MsG0180005485.01.T01:CDS 45.0%
AAATGGGACAGCCTCCAAAT+GGG - Chr1:92309373-92309392 MsG0180005485.01.T01:CDS 45.0%
AACCCCAGAACAGAAGTTGT+TGG + Chr1:92309335-92309354 None:intergenic 45.0%
ACATGCTTCTTCTACCAGCT+TGG + Chr1:92309291-92309310 None:intergenic 45.0%
ACCATCCTCAAATTCTGGTC+TGG - Chr1:92307306-92307325 MsG0180005485.01.T01:intron 45.0%
ACTTTACAGAAAGGTGGTGC+TGG - Chr1:92310077-92310096 MsG0180005485.01.T01:intron 45.0%
AGCTGTAGAAGACTTCCTTC+TGG - Chr1:92307968-92307987 MsG0180005485.01.T01:intron 45.0%
ATGAAAGGCTTAGAAGCGAG+TGG - Chr1:92309533-92309552 MsG0180005485.01.T01:CDS 45.0%
ATTTGAGGATGGTAGAGCCA+TGG + Chr1:92307299-92307318 None:intergenic 45.0%
CAAGAACGAACCGCGAAAAA+AGG - Chr1:92310389-92310408 MsG0180005485.01.T01:intron 45.0%
CAATCTGAGTTGCGGCATTA+AGG - Chr1:92306847-92306866 MsG0180005485.01.T01:CDS 45.0%
CACAGTCGGATTCCAAATTC+TGG - Chr1:92310121-92310140 MsG0180005485.01.T01:intron 45.0%
CATTGGCAAAGGATTGCCAA+GGG + Chr1:92307373-92307392 None:intergenic 45.0%
CGCAACTCAGATTGTGATTG+CGG + Chr1:92306841-92306860 None:intergenic 45.0%
CGCAATCACAATCTGAGTTG+CGG - Chr1:92306839-92306858 MsG0180005485.01.T01:CDS 45.0%
CTCAGACAGATAGTCCTGTT+TGG - Chr1:92307521-92307540 MsG0180005485.01.T01:CDS 45.0%
GAACTGGATCCAGGTCATAT+TGG + Chr1:92308434-92308453 None:intergenic 45.0%
GAATCGTCGAACCCAAATGA+AGG - Chr1:92306778-92306797 MsG0180005485.01.T01:CDS 45.0%
GAATGCAAAGACTAACTCGC+AGG + Chr1:92310509-92310528 None:intergenic 45.0%
GACCAACAACTTCTGTTCTG+GGG - Chr1:92309330-92309349 MsG0180005485.01.T01:CDS 45.0%
GAGAGGATGAGTATGAAAGC+CGG - Chr1:92306432-92306451 MsG0180005485.01.T01:three_prime_UTR 45.0%
GAGATGGTTCACATTGCCAA+AGG - Chr1:92309586-92309605 MsG0180005485.01.T01:CDS 45.0%
GCTCTACCATCCTCAAATTC+TGG - Chr1:92307301-92307320 MsG0180005485.01.T01:intron 45.0%
GGAACAATTGCAAAGCCTGA+AGG + Chr1:92310017-92310036 None:intergenic 45.0%
GGAACTTGGTATGGAAGGAA+CGG - Chr1:92307327-92307346 MsG0180005485.01.T01:intron 45.0%
GGCTTTGCAATTGTTCCTGA+TGG - Chr1:92310020-92310039 MsG0180005485.01.T01:intron 45.0%
GGTGTGATCATCGTTTGAGA+TGG + Chr1:92309162-92309181 None:intergenic 45.0%
GTTCACATTGCCAAAGGTCA+AGG - Chr1:92309592-92309611 MsG0180005485.01.T01:CDS 45.0%
GTTCTGTAACAGCATGCAGA+AGG - Chr1:92307880-92307899 MsG0180005485.01.T01:intron 45.0%
TAAGCAACGGACGATAGAGT+TGG + Chr1:92309056-92309075 None:intergenic 45.0%
TACTACTTCCATCAATCCCC+AGG + Chr1:92307429-92307448 None:intergenic 45.0%
TAGGAAGGGTTGCTTAAGGA+AGG - Chr1:92310358-92310377 MsG0180005485.01.T01:intron 45.0%
TATGTTGCACTCTTGCCTTC+AGG - Chr1:92309999-92310018 MsG0180005485.01.T01:intron 45.0%
TCCAGACCAGAATTTGAGGA+TGG + Chr1:92307310-92307329 None:intergenic 45.0%
TCTGCAACAATACAGCCAGA+AGG + Chr1:92307986-92308005 None:intergenic 45.0%
TGAAAGGCTTAGAAGCGAGT+GGG - Chr1:92309534-92309553 MsG0180005485.01.T01:CDS 45.0%
TGTACGAGACCAATATGACC+TGG - Chr1:92308648-92308667 MsG0180005485.01.T01:intron 45.0%
TGTGTACGACCAATATGACC+TGG - Chr1:92308422-92308441 MsG0180005485.01.T01:intron 45.0%
TTAGCGCTGCAACATCTGTT+TGG - Chr1:92309470-92309489 MsG0180005485.01.T01:CDS 45.0%
TTCAATGATTGCCCGTCAAC+TGG + Chr1:92309951-92309970 None:intergenic 45.0%
TTGGATTTGGCGCTCATAGA+TGG - Chr1:92309085-92309104 MsG0180005485.01.T01:CDS 45.0%
TTTGAGGATGGTAGAGCCAT+GGG + Chr1:92307298-92307317 None:intergenic 45.0%
! AACAGCATGCAGAAGGTGTA+TGG - Chr1:92307887-92307906 MsG0180005485.01.T01:intron 45.0%
! AACTGACTCCATTGTGAGCT+TGG + Chr1:92310165-92310184 None:intergenic 45.0%
! ACAGCATGCAGAAGGTGTAT+GGG - Chr1:92307888-92307907 MsG0180005485.01.T01:intron 45.0%
! TCATTTGGGTTCGACGATTC+TGG + Chr1:92306778-92306797 None:intergenic 45.0%
! TGACGGGCAATCATTGAATG+TGG - Chr1:92309953-92309972 MsG0180005485.01.T01:CDS 45.0%
! TGTATTGGTCCTAAACCTGC+TGG - Chr1:92307610-92307629 MsG0180005485.01.T01:CDS 45.0%
! TTCTGGTCTGGAACTTGGTA+TGG - Chr1:92307318-92307337 MsG0180005485.01.T01:intron 45.0%
! TTGAATGTGGTGATGAGTGG+TGG - Chr1:92309966-92309985 MsG0180005485.01.T01:intron 45.0%
!! AGATCTTGCATTGGCTGCTA+TGG - Chr1:92307480-92307499 MsG0180005485.01.T01:CDS 45.0%
AATGGGACAGCCTCCAAATG+GGG - Chr1:92309374-92309393 MsG0180005485.01.T01:CDS 50.0%
ACCGCGAAAAAAGGAACTCG+TGG - Chr1:92310398-92310417 MsG0180005485.01.T01:intron 50.0%
ACTTGGTATGGAAGGAACGG+TGG - Chr1:92307330-92307349 MsG0180005485.01.T01:intron 50.0%
AGATGGTCGCTTCATGTCCT+GGG - Chr1:92307409-92307428 MsG0180005485.01.T01:CDS 50.0%
AGGTCACTTGGATTGAGCAC+TGG - Chr1:92309007-92309026 MsG0180005485.01.T01:intron 50.0%
ATTGCCAAAGGTCAAGGGCA+AGG - Chr1:92309598-92309617 MsG0180005485.01.T01:CDS 50.0%
ATTTGACATGCCGTAGCCAG+AGG + Chr1:92310054-92310073 None:intergenic 50.0%
CAAAGTTATCGCTTCCGGAC+CGG + Chr1:92306454-92306473 None:intergenic 50.0%
CAACTGTGGACCAGCAATTC+TGG - Chr1:92307155-92307174 MsG0180005485.01.T01:intron 50.0%
CATCACTCAGAGTCCCCATT+TGG + Chr1:92309390-92309409 None:intergenic 50.0%
CCAGAGGGATCATTACCATC+AGG + Chr1:92310038-92310057 None:intergenic 50.0%
CCATTGGCAAAGGATTGCCA+AGG + Chr1:92307374-92307393 None:intergenic 50.0%
CCTTGGCAATCCTTTGCCAA+TGG - Chr1:92307371-92307390 MsG0180005485.01.T01:CDS 50.0%
CTGAAGCTACGAGAGAAACC+GGG - Chr1:92307641-92307660 MsG0180005485.01.T01:CDS 50.0%
CTTCATGTCCTGGGGATTGA+TGG - Chr1:92307418-92307437 MsG0180005485.01.T01:CDS 50.0%
GATGAGTATGAAAGCCGGTC+CGG - Chr1:92306437-92306456 MsG0180005485.01.T01:three_prime_UTR 50.0%
GATGGATACATCTTGCTCGG+TGG - Chr1:92309914-92309933 MsG0180005485.01.T01:CDS 50.0%
GCAACAAAGCCAGCAGGTTT+AGG + Chr1:92307622-92307641 None:intergenic 50.0%
GCATGCTGTTACAGAACCGA+AGG + Chr1:92307877-92307896 None:intergenic 50.0%
GCTGAAGCTACGAGAGAAAC+CGG - Chr1:92307640-92307659 MsG0180005485.01.T01:CDS 50.0%
GGTAATGATCCCTCTGGCTA+CGG - Chr1:92310041-92310060 MsG0180005485.01.T01:intron 50.0%
GGTCACTTGGATTGAGCACT+GGG - Chr1:92309008-92309027 MsG0180005485.01.T01:intron 50.0%
GTGGTGTATGCACCAGTTGA+CGG - Chr1:92309936-92309955 MsG0180005485.01.T01:CDS 50.0%
GTTTCCTTGCCCTTGACCTT+TGG + Chr1:92309605-92309624 None:intergenic 50.0%
TAGCATTCGCAGCAGAGAAC+TGG + Chr1:92308676-92308695 None:intergenic 50.0%
TAGCATTCGCCACAGAGAAC+TGG + Chr1:92308450-92308469 None:intergenic 50.0%
TCCAACTGCCAAGCTCACAA+TGG - Chr1:92310154-92310173 MsG0180005485.01.T01:intron 50.0%
TCCATTGTGAGCTTGGCAGT+TGG + Chr1:92310158-92310177 None:intergenic 50.0%
TCTGCTTGGGAGAATGAGAG+AGG - Chr1:92306415-92306434 MsG0180005485.01.T01:three_prime_UTR 50.0%
TCTGGCTACGGCATGTCAAA+TGG - Chr1:92310053-92310072 MsG0180005485.01.T01:intron 50.0%
TGGTGTATGCACCAGTTGAC+GGG - Chr1:92309937-92309956 MsG0180005485.01.T01:CDS 50.0%
TTTGACATGCCGTAGCCAGA+GGG + Chr1:92310053-92310072 None:intergenic 50.0%
! CCTGATGGTAATGATCCCTC+TGG - Chr1:92310035-92310054 MsG0180005485.01.T01:intron 50.0%
! GATCAGGATGGTGGTGATGA+TGG - Chr1:92306497-92306516 MsG0180005485.01.T01:three_prime_UTR 50.0%
! GGTCTGGAACTTGGTATGGA+AGG - Chr1:92307322-92307341 MsG0180005485.01.T01:intron 50.0%
! GGTGGAAGTTTGCTCACAGT+CGG - Chr1:92310107-92310126 MsG0180005485.01.T01:intron 50.0%
! TCTGGTGATGATCAGGATGG+TGG - Chr1:92306488-92306507 MsG0180005485.01.T01:three_prime_UTR 50.0%
! TTTGCAGCATTGAGCCAAGC+TGG - Chr1:92309274-92309293 MsG0180005485.01.T01:intron 50.0%
!! CAGAGTGAGATTGGTCTCAC+TGG - Chr1:92306374-92306393 MsG0180005485.01.T01:three_prime_UTR 50.0%
!!! GCCACGAGTTCCTTTTTTCG+CGG + Chr1:92310402-92310421 None:intergenic 50.0%
ACCCTCCAAAGGCAGTGTGA+AGG - Chr1:92309114-92309133 MsG0180005485.01.T01:intron 55.0%
AGCCTTCACACTGCCTTTGG+AGG + Chr1:92309119-92309138 None:intergenic 55.0%
ATGGAGGGGCAGAGTGAGAT+TGG - Chr1:92306365-92306384 MsG0180005485.01.T01:three_prime_UTR 55.0%
CACTCAGAGTCCCCATTTGG+AGG + Chr1:92309387-92309406 None:intergenic 55.0%
CCAAAGGCAGTGTGAAGGCT+TGG - Chr1:92309119-92309138 MsG0180005485.01.T01:intron 55.0%
CCAAGCCTTCACACTGCCTT+TGG + Chr1:92309122-92309141 None:intergenic 55.0%
GACCTGGATCCAGTTCTCTG+TGG - Chr1:92308438-92308457 MsG0180005485.01.T01:intron 55.0%
GAGATGGTCGCTTCATGTCC+TGG - Chr1:92307408-92307427 MsG0180005485.01.T01:CDS 55.0%
GAGGTGAATCCCGACACACT+TGG + Chr1:92308801-92308820 None:intergenic 55.0%
GATGGTCGCTTCATGTCCTG+GGG - Chr1:92307410-92307429 MsG0180005485.01.T01:CDS 55.0%
GCCTTCACACTGCCTTTGGA+GGG + Chr1:92309118-92309137 None:intergenic 55.0%
GCTTCAGCAACAAAGCCAGC+AGG + Chr1:92307628-92307647 None:intergenic 55.0%
GGTATGGAAGGAACGGTGGT+GGG - Chr1:92307334-92307353 MsG0180005485.01.T01:intron 55.0%
GTATGGAAGGAACGGTGGTG+GGG - Chr1:92307335-92307354 MsG0180005485.01.T01:intron 55.0%
TGCAGCGCTAAGCACGATAC+CGG + Chr1:92309461-92309480 None:intergenic 55.0%
TGGTATGGAAGGAACGGTGG+TGG - Chr1:92307333-92307352 MsG0180005485.01.T01:intron 55.0%
! GGATACATCTTGCTCGGTGG+TGG - Chr1:92309917-92309936 MsG0180005485.01.T01:CDS 55.0%
! TATGGAAGGAACGGTGGTGG+GGG - Chr1:92307336-92307355 MsG0180005485.01.T01:intron 55.0%
! TGGTGGACCCATGCAAGAGA+TGG - Chr1:92309570-92309589 MsG0180005485.01.T01:CDS 55.0%
! TTCACACTGCCTTTGGAGGG+TGG + Chr1:92309115-92309134 None:intergenic 55.0%
!! GTGATGATGGTCAGCGCAAG+AGG - Chr1:92306510-92306529 MsG0180005485.01.T01:three_prime_UTR 55.0%
CGCAGCAGAGAACTGGATCC+AGG + Chr1:92308669-92308688 None:intergenic 60.0%
CGCCACAGAGAACTGGATCC+AGG + Chr1:92308443-92308462 None:intergenic 60.0%
GATGGATCGCCACCCTCCAA+AGG - Chr1:92309103-92309122 MsG0180005485.01.T01:CDS 60.0%
GCAGCGCTAAGCACGATACC+GGG + Chr1:92309460-92309479 None:intergenic 60.0%
GGAACTCGTGGCGTTGCTGA+TGG - Chr1:92310410-92310429 MsG0180005485.01.T01:intron 60.0%
! TGCAGAAGGTGTATGGGCCG+TGG - Chr1:92307894-92307913 MsG0180005485.01.T01:intron 60.0%
!! AAAGGTGGTGCTGGCGATGG+TGG - Chr1:92310086-92310105 MsG0180005485.01.T01:intron 60.0%
!! CAGAAAGGTGGTGCTGGCGA+TGG - Chr1:92310083-92310102 MsG0180005485.01.T01:intron 60.0%
GCGCTAAGCACGATACCGGG+AGG + Chr1:92309457-92309476 None:intergenic 65.0%
GGGGGTGGTTCAAGCTCCCT+TGG - Chr1:92307354-92307373 MsG0180005485.01.T01:intron 65.0%
ACGATACCGGGAGGCTCGCC+AGG + Chr1:92309448-92309467 None:intergenic 70.0%
CGATACCGGGAGGCTCGCCA+GGG + Chr1:92309447-92309466 None:intergenic 70.0%
GATGACCCTGGCGAGCCTCC+CGG - Chr1:92309439-92309458 MsG0180005485.01.T01:CDS 70.0%
!! GGAAGGAACGGTGGTGGGGG+TGG - Chr1:92307339-92307358 MsG0180005485.01.T01:intron 70.0%
!! GGTGGTGCTGGCGATGGTGG+TGG - Chr1:92310089-92310108 MsG0180005485.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 92306365 92310651 92306365 ID=MsG0180005485.01;Name=MsG0180005485.01
Chr1 mRNA 92306365 92310651 92306365 ID=MsG0180005485.01.T01;Parent=MsG0180005485.01;Name=MsG0180005485.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0.2|0.33|1|1|1|6|401|587
Chr1 exon 92306365 92307149 92306365 ID=MsG0180005485.01.T01:exon:49682;Parent=MsG0180005485.01.T01
Chr1 exon 92307368 92307735 92307368 ID=MsG0180005485.01.T01:exon:49681;Parent=MsG0180005485.01.T01
Chr1 exon 92309079 92309124 92309079 ID=MsG0180005485.01.T01:exon:49680;Parent=MsG0180005485.01.T01
Chr1 exon 92309305 92309973 92309305 ID=MsG0180005485.01.T01:exon:49679;Parent=MsG0180005485.01.T01
Chr1 exon 92310256 92310334 92310256 ID=MsG0180005485.01.T01:exon:49678;Parent=MsG0180005485.01.T01
Chr1 exon 92310434 92310651 92310434 ID=MsG0180005485.01.T01:exon:49677;Parent=MsG0180005485.01.T01
Chr1 CDS 92310434 92310651 92310434 ID=MsG0180005485.01.T01:cds;Parent=MsG0180005485.01.T01
Chr1 CDS 92310256 92310334 92310256 ID=MsG0180005485.01.T01:cds;Parent=MsG0180005485.01.T01
Chr1 CDS 92309305 92309973 92309305 ID=MsG0180005485.01.T01:cds;Parent=MsG0180005485.01.T01
Chr1 CDS 92309079 92309124 92309079 ID=MsG0180005485.01.T01:cds;Parent=MsG0180005485.01.T01
Chr1 CDS 92307368 92307735 92307368 ID=MsG0180005485.01.T01:cds;Parent=MsG0180005485.01.T01
Chr1 CDS 92306766 92307149 92306766 ID=MsG0180005485.01.T01:cds;Parent=MsG0180005485.01.T01
Chr1 three_prime_UTR 92306365 92306765 92306365 ID=MsG0180005485.01.T01:three_prime_utr;Parent=MsG0180005485.01.T01
Gene Sequence

>MsG0180005485.01.T01

ATGGAGGGGCAGAGTGAGATTGGTCTCACTGGTGATAGCTTAGATACTAGTCTGCTTGGGAGAATGAGAGAGGATGAGTATGAAAGCCGGTCCGGAAGCGATAACTTTGATCTTGAAGGATTATCTGGTGATGATCAGGATGGTGGTGATGATGGTCAGCGCAAGAGGAAGAAGAGATACCACAGACACACTCCTAATCAAATTCAAGAGCTTGAATCTTTCTTCAAGGAGTGTCCTCATCCTGATGAAAAACAAAGGTTGGATCTTAGCAAGAGACTTGGTTTGGAAAATAAACAAACTCAACTGGAAAGGCATGAGAACATAATGCTTAGGCAGGAAAATGACAAGCTAAGAGGGGAGAATAGCATGATGAAAGAAGCAATGGTGAATCCAATATGTAACAACTGTGCAACTGTGGACCAGCAATTCTGGCCAAATATTTTCGAAGAGCACCAGATTAGAATTGAAAAGCCCCGTCTAAAGGACGAATTGAACCGTATATGCCTTAACAAACAAGTTCCTTGGCAAACAATATCATCATTGGCTAATCCCATGGCTCTACCATCCTCAAATTCTGGTCTGGAACTTGGTATGGAAGGAACGGTGGTGGGGGTGGTTCAAGCTCCCTTGGCAATCCTTTGCCAATGGAATTATGATTCTCGGAGATGGTCGCTTCATGTCCTGGGGATTGATGGAAGTAGTAGTGATGTTCAGCTTGAGAGATCGGCTCTAATAGATCTTGCATTGGCTGCTATGGATGAATTATTAAAGATGGCTCAGACAGATAGTCCTGTTTGGATTAAGGGTTTGGATGGAGAGAGAGACATATTGAATCAAGAAGAGTATGGACGGTTGATTTCTTCTTGTATTGGTCCTAAACCTGCTGGCTTTGTTGCTGAAGCTACGAGAGAAACCGGGATAGTAATAATCAACAGTTTAGCACTTGTGGAAACTTTGATGGATGCGCATGCAGAAGGTGTATGGGCCGTGGTTGATGTTTCTGTTGAGATTGCATTGAGCCAAGCTGGTAGAAGAAGCATGTTGAAGCTGGCACAACGTATGACCAACAACTTCTGTTCTGGGGTTTGTGCTTCATCTGCTAGAAAATGGGACAGCCTCCAAATGGGGACTCTGAGTGATGACATGAGAGTTATGACTAGGAAAAATGTTGATGACCCTGGCGAGCCTCCCGGTATCGTGCTTAGCGCTGCAACATCTGTTTGGATGCCAGTTTCACGACAAAGACTGTTTGATTTTCTGCGTGATGAAAGGCTTAGAAGCGAGTGGGACATTTTGTCTAATGGTGGACCCATGCAAGAGATGGTTCACATTGCCAAAGGTCAAGGGCAAGGAAACTGCGTTTCTCTCCTTCGTGCTAATGCTGTTAATGCGAATGATAGCAGCATGTTGATTCTGCAAGAAACTTGGATGGATACATCTTGCTCGGTGGTGGTGTATGCACCAGTTGACGGGCAATCATTGAATGTGGTGATGAGTGGTGGAGATTCTGCATATGTTGCACTCTTGCCTTCAGGCTTTGCAATTGTTCCTGATGGTAATGATCCCTCTGGCTACGGCATGTCAAATGGTACTTTACAGAAAGGTGGTGCTGGCGATGGTGGTGGAAGTTTGCTCACAGTCGGATTCCAAATTCTGGTGAATAGTCTTCCAACTGCCAAGCTCACAATGGAGTCAGTTGATACTGTGAATAATCTCATCTCATGCACCATTCAGAAGATCAAAGCTGCACTTAGAGTTGCATAA

Protein sequence

>MsG0180005485.01.T01

MEGQSEIGLTGDSLDTSLLGRMREDEYESRSGSDNFDLEGLSGDDQDGGDDGQRKRKKRYHRHTPNQIQELESFFKECPHPDEKQRLDLSKRLGLENKQTQLERHENIMLRQENDKLRGENSMMKEAMVNPICNNCATVDQQFWPNIFEEHQIRIEKPRLKDELNRICLNKQVPWQTISSLANPMALPSSNSGLELGMEGTVVGVVQAPLAILCQWNYDSRRWSLHVLGIDGSSSDVQLERSALIDLALAAMDELLKMAQTDSPVWIKGLDGERDILNQEEYGRLISSCIGPKPAGFVAEATRETGIVIINSLALVETLMDAHAEGVWAVVDVSVEIALSQAGRRSMLKLAQRMTNNFCSGVCASSARKWDSLQMGTLSDDMRVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGQGNCVSLLRANAVNANDSSMLILQETWMDTSCSVVVYAPVDGQSLNVVMSGGDSAYVALLPSGFAIVPDGNDPSGYGMSNGTLQKGGAGDGGGSLLTVGFQILVNSLPTAKLTMESVDTVNNLISCTIQKIKAALRVA*