AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047179.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047179.01.T01 MTR_4g122650 75.000 160 28 3 1 158 1 150 3.29e-72 235
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047179.01.T01 AT4G16280 54.000 100 35 2 61 158 17 107 1.83e-24 103
MsG0880047179.01.T01 AT4G16280 54.000 100 35 2 61 158 92 182 2.06e-24 102
MsG0880047179.01.T01 AT4G16280 54.000 100 35 2 61 158 92 182 2.61e-24 102

Find 104 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTCTGTTGGTGGTTGTT+GGG 0.255148 8:-83035613 MsG0880047179.01.T01:CDS
GACCGTGGTGGTGATGAATT+TGG 0.265495 8:-83039942 MsG0880047179.01.T01:CDS
GGCTTTCTGTTGGTGGTTGT+TGG 0.266315 8:-83035614 MsG0880047179.01.T01:CDS
ACAACAACCTGCACAATAAA+AGG 0.277301 8:+83035554 None:intergenic
TCTTCTTCTTCTTATTCTCT+AGG 0.292092 8:-83040233 MsG0880047179.01.T01:five_prime_UTR
CTGTCTTTCTATCTTTGATC+AGG 0.302702 8:+83038608 None:intergenic
ATCTTCCTCAGTTGCTGTTC+GGG 0.316387 8:+83038817 None:intergenic
CTCTGGTCGTGGTGCTTCAC+CGG 0.329103 8:-83039868 MsG0880047179.01.T01:CDS
CATCTTCCTCAGTTGCTGTT+CGG 0.337274 8:+83038816 None:intergenic
CTAGATTCGTCCTTTGTTTG+AGG 0.345542 8:-83038656 MsG0880047179.01.T01:intron
CTGCCACCACCGCCGTTGTC+TGG 0.357590 8:-83039912 MsG0880047179.01.T01:CDS
TTTCACTCTGTTCGCCAAAC+TGG 0.374315 8:-83040201 MsG0880047179.01.T01:five_prime_UTR
ACAACAACAATCGTCCTTCC+AGG 0.381776 8:-83040127 MsG0880047179.01.T01:five_prime_UTR
TCCTCTGTGCCTATCCAGTT+TGG 0.387346 8:+83040187 None:intergenic
AGGGTGTTATTTAGTGGAAT+TGG 0.389995 8:-83035586 MsG0880047179.01.T01:CDS
CTTTCTGTTGGTGGTTGTTG+GGG 0.399788 8:-83035612 MsG0880047179.01.T01:CDS
CTTCTTCTTCTTATTCTCTA+GGG 0.402296 8:-83040232 MsG0880047179.01.T01:five_prime_UTR
GAAGGACGATTGTTGTTGTA+AGG 0.406461 8:+83040131 None:intergenic
GGGGCGAGGGTGTTATTTAG+TGG 0.406558 8:-83035592 MsG0880047179.01.T01:CDS
AGGGTAATCATCGTCGTTGT+TGG 0.408240 8:+83040151 None:intergenic
TTTACAGACTAAACAATGTA+AGG 0.409440 8:+83035293 None:intergenic
CATAATCGACATACTCTTCC+CGG 0.417528 8:-83035479 MsG0880047179.01.T01:CDS
GCTCAGTGGCTTTCTGTTGG+TGG 0.423027 8:-83035621 MsG0880047179.01.T01:intron
TACCTCAGAGGAAGCTGATC+AGG 0.423861 8:-83035516 MsG0880047179.01.T01:CDS
AAGCCATCTCCGGCAGGTGG+TGG 0.426599 8:+83039967 None:intergenic
AAACGCGGGTTTCCGTTCTC+TGG 0.431929 8:-83039885 MsG0880047179.01.T01:CDS
CGTCCACCACCTGCCGGAGA+TGG 0.432542 8:-83039970 MsG0880047179.01.T01:CDS
CTACAACCACCGTCGAAGTC+CGG 0.434480 8:-83040075 MsG0880047179.01.T01:CDS
AATATTATCATTTAGGGTGT+TGG 0.444194 8:-83035376 MsG0880047179.01.T01:intron
TTGCTGCGGTGGAGAGGAGC+GGG 0.446513 8:+83040041 None:intergenic
TTCATTTCAGATCATTCTGA+TGG 0.451822 8:-83038875 MsG0880047179.01.T01:intron
ACCCTACCGGAGACCATCGC+GGG 0.469284 8:+83040006 None:intergenic
TGACCAGACAACGGCGGTGG+TGG 0.479479 8:+83039909 None:intergenic
CGTCCTTTGTTTGAGGAACA+CGG 0.480917 8:-83038649 MsG0880047179.01.T01:CDS
CAGACAACGGCGGTGGTGGC+AGG 0.481045 8:+83039913 None:intergenic
TCTGCTCAGTGGCTTTCTGT+TGG 0.481801 8:-83035624 MsG0880047179.01.T01:intron
CGCCATCAGCATACCGCACT+TGG 0.481950 8:+83035347 None:intergenic
ATCGGAGAAACGAGAAGTCC+TGG 0.486532 8:+83040109 None:intergenic
GCGGTATGCTGATGGCGAAC+GGG 0.492447 8:-83035341 MsG0880047179.01.T01:CDS
TACAACCACCGTCGAAGTCC+GGG 0.494951 8:-83040074 MsG0880047179.01.T01:CDS
TTGTAAACTCCTTTGTTCAC+CGG 0.498822 8:-83040309 MsG0880047179.01.T01:five_prime_UTR
GTTGTAGTTCATCGGAGAAT+CGG 0.499980 8:+83040091 None:intergenic
GGGTTTCCGTTCTCTGGTCG+TGG 0.502459 8:-83039879 MsG0880047179.01.T01:CDS
TCTGGTCGTGGTGCTTCACC+GGG 0.506572 8:-83039867 MsG0880047179.01.T01:intron
TGTCTTTCTATCTTTGATCA+GGG 0.514792 8:+83038609 None:intergenic
ATCAGCATACCGCACTTGGA+TGG 0.516209 8:+83035351 None:intergenic
CTGATCAAAGATAGAAAGAC+AGG 0.530057 8:-83038607 MsG0880047179.01.T01:CDS
TGCGGTATGCTGATGGCGAA+CGG 0.531466 8:-83035342 MsG0880047179.01.T01:CDS
ATTTCAGATCATTCTGATGG+TGG 0.537248 8:-83038872 MsG0880047179.01.T01:intron
GACTATCAAAGTTGCTGCGG+TGG 0.547089 8:+83040030 None:intergenic
TTCTGACCAGACAACGGCGG+TGG 0.547367 8:+83039906 None:intergenic
CCACGGTCTGAAGCCATCTC+CGG 0.547479 8:+83039957 None:intergenic
CCGTTGTCTGGTCAGAAACG+CGG 0.547690 8:-83039900 MsG0880047179.01.T01:CDS
CGTTGTCTGGTCAGAAACGC+GGG 0.548283 8:-83039899 MsG0880047179.01.T01:CDS
TCAGCATACCGCACTTGGAT+GGG 0.550010 8:+83035352 None:intergenic
GTCTCCGGTAGGGTTGGTAG+TGG 0.550960 8:-83039997 MsG0880047179.01.T01:CDS
GGAAACCACCCGGACTTCGA+CGG 0.551416 8:+83040066 None:intergenic
GTCCTTTGTTTGAGGAACAC+GGG 0.557820 8:-83038648 MsG0880047179.01.T01:CDS
CCCCGCGATGGTCTCCGGTA+GGG 0.558114 8:-83040007 MsG0880047179.01.T01:CDS
GCGATGGTCTCCGGTAGGGT+TGG 0.561813 8:-83040003 MsG0880047179.01.T01:CDS
ATCCAAGTGCGGTATGCTGA+TGG 0.564983 8:-83035349 MsG0880047179.01.T01:CDS
GATGGCGAACGGGAACGCCT+TGG 0.565052 8:-83035331 MsG0880047179.01.T01:CDS
TTCTTTGCACCGGTGAACAA+AGG 0.569032 8:+83040300 None:intergenic
CTCTGTTCGCCAAACTGGAT+AGG 0.570147 8:-83040196 MsG0880047179.01.T01:five_prime_UTR
TTTCTGTTGGTGGTTGTTGG+GGG 0.572232 8:-83035611 MsG0880047179.01.T01:CDS
CGACGGTGGTTGTAGTTCAT+CGG 0.573565 8:+83040083 None:intergenic
GGAGCGGGGCGGAAACCACC+CGG 0.574715 8:+83040056 None:intergenic
AACCACCCGGACTTCGACGG+TGG 0.577595 8:+83040069 None:intergenic
CGTCGTTGTTGGCGCCGTAG+CGG 0.578639 8:+83040162 None:intergenic
AGAAAGACAGGACAGCATCA+AGG 0.578908 8:-83038595 MsG0880047179.01.T01:CDS
TTCCCGTGTTCCTCAAACAA+AGG 0.584058 8:+83038646 None:intergenic
GTTGCTGCGGTGGAGAGGAG+CGG 0.584740 8:+83040040 None:intergenic
ATTGCACTGTAGCTGTGTGG+TGG 0.588012 8:-83036088 MsG0880047179.01.T01:CDS
TCAAAGTTGCTGCGGTGGAG+AGG 0.588339 8:+83040035 None:intergenic
CCGGAGATGGCTTCAGACCG+TGG 0.592054 8:-83039957 MsG0880047179.01.T01:CDS
GGTCTGAAGCCATCTCCGGC+AGG 0.594465 8:+83039961 None:intergenic
CTGAAGCCATCTCCGGCAGG+TGG 0.598770 8:+83039964 None:intergenic
GATATGAGATGTGAAATAGA+AGG 0.599100 8:-83036155 MsG0880047179.01.T01:CDS
GGAACACGGGAATGTGGTTG+AGG 0.599420 8:-83038635 MsG0880047179.01.T01:CDS
GAAGCACCACGACCAGAGAA+CGG 0.605717 8:+83039873 None:intergenic
AAGGACGATTGTTGTTGTAA+GGG 0.606429 8:+83040132 None:intergenic
AAGTGTTTATTTCTTTGCAC+CGG 0.607353 8:+83040290 None:intergenic
ATAAAATAATGCTACCTCAG+AGG 0.608398 8:-83035528 MsG0880047179.01.T01:CDS
AAAACCACTACCAACCCTAC+CGG 0.609455 8:+83039993 None:intergenic
TCTTCCTCAGTTGCTGTTCG+GGG 0.619119 8:+83038818 None:intergenic
GTTTGAGGAACACGGGAATG+TGG 0.627088 8:-83038641 MsG0880047179.01.T01:CDS
TGCTGCGGTGGAGAGGAGCG+GGG 0.630820 8:+83040042 None:intergenic
TGTTCCCCGAACAGCAACTG+AGG 0.649804 8:-83038822 MsG0880047179.01.T01:CDS
AGGCACAGAGGAAACCGCTA+CGG 0.651525 8:-83040176 MsG0880047179.01.T01:five_prime_UTR
GGGGACTATCAAAGTTGCTG+CGG 0.656861 8:+83040027 None:intergenic
GAGAAACGAGAAGTCCTGGA+AGG 0.660597 8:+83040113 None:intergenic
AACCCTACCGGAGACCATCG+CGG 0.670090 8:+83040005 None:intergenic
TGCGGTGGAGAGGAGCGGGG+CGG 0.670950 8:+83040045 None:intergenic
CCCTACCGGAGACCATCGCG+GGG 0.680085 8:+83040007 None:intergenic
TATATTGCACTGTAGCTGTG+TGG 0.681024 8:-83036091 MsG0880047179.01.T01:CDS
CCGCGTTTCTGACCAGACAA+CGG 0.681775 8:+83039900 None:intergenic
GTGTTGGTCCCATCCAAGTG+CGG 0.689815 8:-83035360 MsG0880047179.01.T01:CDS
TGCCTGATCAGCTTCCTCTG+AGG 0.701163 8:+83035514 None:intergenic
AACCACCGTCGAAGTCCGGG+TGG 0.712649 8:-83040071 MsG0880047179.01.T01:CDS
ATCCAAATTCATCACCACCA+CGG 0.721447 8:+83039940 None:intergenic
GCCAAACTGGATAGGCACAG+AGG 0.721895 8:-83040188 MsG0880047179.01.T01:five_prime_UTR
GAGATGGCTTCAGACCGTGG+TGG 0.724642 8:-83039954 MsG0880047179.01.T01:CDS
CGTTTCTGACCAGACAACGG+CGG 0.728161 8:+83039903 None:intergenic
CCTACCGGAGACCATCGCGG+GGG 0.794276 8:+83040008 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTTAAAGTAGTTTTTA+AGG - Chr8:83036279-83036298 MsG0880047179.01.T01:intron 10.0%
!! ACGTATAATATTATCATTTA+GGG - Chr8:83040244-83040263 MsG0880047179.01.T01:five_prime_UTR 15.0%
!! ACTAACTCATAATTAACAAT+TGG + Chr8:83039403-83039422 None:intergenic 20.0%
!! CAAGAAAATAACAAGTAAAA+AGG + Chr8:83036848-83036867 None:intergenic 20.0%
!! CACGTATAATATTATCATTT+AGG - Chr8:83040243-83040262 MsG0880047179.01.T01:five_prime_UTR 20.0%
!! GTTGAAACTAAAATTAAACT+AGG + Chr8:83038368-83038387 None:intergenic 20.0%
!! TGATTCTTTATGTTAAATGT+AGG - Chr8:83038074-83038093 MsG0880047179.01.T01:intron 20.0%
!! TTCATTAGATACATTATGAA+TGG - Chr8:83037643-83037662 MsG0880047179.01.T01:intron 20.0%
!! TTTCTATTTATTATTCCTGT+GGG - Chr8:83039786-83039805 MsG0880047179.01.T01:intron 20.0%
!!! ATAGAAATTACTTTAGAAGT+CGG - Chr8:83037977-83037996 MsG0880047179.01.T01:intron 20.0%
!!! ATAGAAATTACTTTAGAAGT+TGG - Chr8:83037977-83037996 MsG0880047179.01.T01:intron 20.0%
!!! CTTCTAAAGTAATTTCTATA+TGG + Chr8:83037976-83037995 None:intergenic 20.0%
!!! GTTTAATTTTTCTCATACTT+TGG - Chr8:83037479-83037498 MsG0880047179.01.T01:intron 20.0%
!!! TATATTTTGATCAGATGTAA+TGG + Chr8:83036894-83036913 None:intergenic 20.0%
!!! TGATTCTTTAAGTTAAATGT+AGG - Chr8:83037808-83037827 MsG0880047179.01.T01:intron 20.0%
!!! TTATCAACTAATTTGTTTGA+CGG - Chr8:83039859-83039878 MsG0880047179.01.T01:intron 20.0%
!!! TTTTCTATTTATTATTCCTG+TGG - Chr8:83039785-83039804 MsG0880047179.01.T01:intron 20.0%
! AATTTACTTTCCAAAATACG+TGG - Chr8:83036638-83036657 MsG0880047179.01.T01:intron 25.0%
! ATATAATTTCCTTTATGACG+TGG - Chr8:83037871-83037890 MsG0880047179.01.T01:intron 25.0%
! GAATGTTAGCATTTATTGAA+TGG - Chr8:83037503-83037522 MsG0880047179.01.T01:intron 25.0%
! GTTGAAACTAAAACTAAACT+AGG + Chr8:83038102-83038121 None:intergenic 25.0%
! TAATAAGCAAAATTCACTTC+AGG + Chr8:83035811-83035830 None:intergenic 25.0%
! TATCAAAGTAATCTTATGAC+AGG + Chr8:83039763-83039782 None:intergenic 25.0%
! TGAGTCTAACTAATAAACAA+AGG + Chr8:83039006-83039025 None:intergenic 25.0%
! TGATCCTTTATGTTAAATGT+AGG - Chr8:83038340-83038359 MsG0880047179.01.T01:intron 25.0%
! TGATTCTTTATGTCAAATGT+AGG - Chr8:83037704-83037723 MsG0880047179.01.T01:intron 25.0%
! TTAATCACAATGTATTTCAG+AGG - Chr8:83037457-83037476 MsG0880047179.01.T01:intron 25.0%
! TTTACAGACTAAACAATGTA+AGG + Chr8:83040336-83040355 None:intergenic 25.0%
!! AATATTATCATTTAGGGTGT+TGG - Chr8:83040250-83040269 MsG0880047179.01.T01:five_prime_UTR 25.0%
!! AATTTTGCCAAACTTTTTGT+TGG - Chr8:83036778-83036797 MsG0880047179.01.T01:intron 25.0%
!! ATTCATGTACATTTTCTTTC+AGG - Chr8:83037087-83037106 MsG0880047179.01.T01:intron 25.0%
!! ATTTTGCCAAACTTTTTGTT+GGG - Chr8:83036779-83036798 MsG0880047179.01.T01:intron 25.0%
!! TACAAATGATGATTTGTGAT+TGG + Chr8:83036258-83036277 None:intergenic 25.0%
!! TAGAAATTACTTTAGAAGTC+GGG - Chr8:83037978-83037997 MsG0880047179.01.T01:intron 25.0%
!! TGAAGTGAATTTTGCTTATT+AGG - Chr8:83035810-83035829 MsG0880047179.01.T01:intron 25.0%
!!! ATTACTGACTTCTAAACTTT+TGG + Chr8:83037389-83037408 None:intergenic 25.0%
!!! GTAGAATTATTTTAGAAGTC+AGG - Chr8:83038762-83038781 MsG0880047179.01.T01:intron 25.0%
!!! TATCAACTAATTTGTTTGAC+GGG - Chr8:83039860-83039879 MsG0880047179.01.T01:intron 25.0%
!!! TCAGTTTTGATTGAGTAAAA+TGG - Chr8:83037542-83037561 MsG0880047179.01.T01:intron 25.0%
!!! TTCTACCTAGGTTTATTTTA+GGG - Chr8:83036061-83036080 MsG0880047179.01.T01:intron 25.0%
!!! TTTTGATTGAGTAAAATGGT+GGG - Chr8:83037546-83037565 MsG0880047179.01.T01:intron 25.0%
AAAGGAAACAGACAAAATCT+TGG - Chr8:83037414-83037433 MsG0880047179.01.T01:intron 30.0%
AAATTCTAATTCCACCTGTT+TGG - Chr8:83038793-83038812 MsG0880047179.01.T01:intron 30.0%
AAGGAAACAGACAAAATCTT+GGG - Chr8:83037415-83037434 MsG0880047179.01.T01:intron 30.0%
AATTCTAATTCCACCTGTTT+GGG - Chr8:83038794-83038813 MsG0880047179.01.T01:intron 30.0%
AGAAGTCAGTAATTGTACAA+AGG - Chr8:83037396-83037415 MsG0880047179.01.T01:intron 30.0%
AGATAACTACACAATAGCAT+TGG + Chr8:83035865-83035884 None:intergenic 30.0%
ATAAAATAATGCTACCTCAG+AGG - Chr8:83040098-83040117 MsG0880047179.01.T01:exon 30.0%
ATCCTAAGTGAATAGTAAGT+AGG - Chr8:83040190-83040209 MsG0880047179.01.T01:five_prime_UTR 30.0%
ATGGAAATGATTTCCTATAC+GGG - Chr8:83038136-83038155 MsG0880047179.01.T01:intron 30.0%
ATTTACAGCTTTCAGTAAAC+TGG - Chr8:83036535-83036554 MsG0880047179.01.T01:intron 30.0%
CATACAATAGGTCAAATTTG+TGG + Chr8:83039911-83039930 None:intergenic 30.0%
CTTCTTCTTCTTATTCTCTA+GGG - Chr8:83035394-83035413 MsG0880047179.01.T01:intron 30.0%
GATATGAGATGTGAAATAGA+AGG - Chr8:83039471-83039490 MsG0880047179.01.T01:intron 30.0%
GATGGAAATGATTTCCTATA+CGG - Chr8:83038135-83038154 MsG0880047179.01.T01:intron 30.0%
GGAGAAAAAAATAGTTACCA+AGG + Chr8:83040315-83040334 None:intergenic 30.0%
GTGTTCTGTATGTTAAATGT+TGG - Chr8:83038598-83038617 MsG0880047179.01.T01:CDS 30.0%
TAAGTGTAATCAATCTACAG+AGG - Chr8:83039432-83039451 MsG0880047179.01.T01:intron 30.0%
TACTGCTCTTTGTATAGAAT+GGG - Chr8:83037250-83037269 MsG0880047179.01.T01:intron 30.0%
TAGCATTTATTGAATGGCTT+GGG - Chr8:83037509-83037528 MsG0880047179.01.T01:intron 30.0%
TATTCACAATCAACAGAAAC+TGG + Chr8:83039158-83039177 None:intergenic 30.0%
TCCTAAGTGAATAGTAAGTA+GGG - Chr8:83040191-83040210 MsG0880047179.01.T01:five_prime_UTR 30.0%
TCTTCTTCTTCTTATTCTCT+AGG - Chr8:83035393-83035412 MsG0880047179.01.T01:intron 30.0%
TGTCTTTCTATCTTTGATCA+GGG + Chr8:83037020-83037039 None:intergenic 30.0%
TTAGCATTTATTGAATGGCT+TGG - Chr8:83037508-83037527 MsG0880047179.01.T01:intron 30.0%
TTAGTTATGCCTTTATCCAA+GGG - Chr8:83039359-83039378 MsG0880047179.01.T01:intron 30.0%
TTCATTTCAGATCATTCTGA+TGG - Chr8:83036751-83036770 MsG0880047179.01.T01:intron 30.0%
TTCTAATTGCACCTTATGAA+TGG - Chr8:83038538-83038557 MsG0880047179.01.T01:intron 30.0%
TTCTATTTGCACCTTATGAA+TGG - Chr8:83038281-83038300 MsG0880047179.01.T01:intron 30.0%
TTTACAGCTTTCAGTAAACT+GGG - Chr8:83036536-83036555 MsG0880047179.01.T01:intron 30.0%
TTTAGTTATGCCTTTATCCA+AGG - Chr8:83039358-83039377 MsG0880047179.01.T01:intron 30.0%
TTTGATTGAGTAAAATGGTG+GGG - Chr8:83037547-83037566 MsG0880047179.01.T01:intron 30.0%
! AAAGTTTTACGTGTGTTTGA+TGG - Chr8:83037848-83037867 MsG0880047179.01.T01:intron 30.0%
! AAGTGTTTATTTCTTTGCAC+CGG + Chr8:83035339-83035358 None:intergenic 30.0%
! AATTTCTATATGGACTGCAT+CGG + Chr8:83037966-83037985 None:intergenic 30.0%
! AGAAATTACTTTAGAAGTCG+GGG - Chr8:83037979-83037998 MsG0880047179.01.T01:intron 30.0%
! TAAAACACCTTTTATTGTGC+AGG - Chr8:83040065-83040084 MsG0880047179.01.T01:CDS 30.0%
! TACGGTTAGTTGTACAAATA+TGG - Chr8:83036370-83036389 MsG0880047179.01.T01:intron 30.0%
!! GTTCTACCTAGGTTTATTTT+AGG - Chr8:83036060-83036079 MsG0880047179.01.T01:intron 30.0%
!!! GAATTATTTTAGAAGTCAGG+CGG - Chr8:83038765-83038784 MsG0880047179.01.T01:intron 30.0%
!!! GTTTTGATTGAGTAAAATGG+TGG - Chr8:83037545-83037564 MsG0880047179.01.T01:intron 30.0%
!!! TCTTATTCTCTAGGGTTTTA+GGG - Chr8:83035402-83035421 MsG0880047179.01.T01:intron 30.0%
!!! TTCTTATTCTCTAGGGTTTT+AGG - Chr8:83035401-83035420 MsG0880047179.01.T01:intron 30.0%
!!! TTTATGTTTTTTCTGCTCAG+TGG - Chr8:83039991-83040010 MsG0880047179.01.T01:CDS 30.0%
AACAGACCCAACAAAAAGTT+TGG + Chr8:83036788-83036807 None:intergenic 35.0%
AAGTAATCTTATGACAGGTG+AGG + Chr8:83039758-83039777 None:intergenic 35.0%
AAGTGAATAGTAAGTAGGGA+AGG - Chr8:83040195-83040214 MsG0880047179.01.T01:five_prime_UTR 35.0%
ACAACAACCTGCACAATAAA+AGG + Chr8:83040075-83040094 None:intergenic 35.0%
ACACCTTCAATCAGAAATGT+CGG - Chr8:83036015-83036034 MsG0880047179.01.T01:intron 35.0%
ATATGATTTCCTGTATGGTG+TGG - Chr8:83038406-83038425 MsG0880047179.01.T01:intron 35.0%
ATGAACGATGCAAAGATTCT+AGG + Chr8:83036185-83036204 None:intergenic 35.0%
ATTTCAGATCATTCTGATGG+TGG - Chr8:83036754-83036773 MsG0880047179.01.T01:intron 35.0%
CAAAATCTTCCCTTGGATAA+AGG + Chr8:83039371-83039390 None:intergenic 35.0%
CAGATAAATCAGTGTGATCT+TGG - Chr8:83039583-83039602 MsG0880047179.01.T01:intron 35.0%
CAGTACAGATTTACATCTCT+CGG + Chr8:83037235-83037254 None:intergenic 35.0%
CTGATCAAAGATAGAAAGAC+AGG - Chr8:83037019-83037038 MsG0880047179.01.T01:intron 35.0%
CTGTCTTTCTATCTTTGATC+AGG + Chr8:83037021-83037040 None:intergenic 35.0%
GAAAAGACCATCATGAAAGT+TGG - Chr8:83038938-83038957 MsG0880047179.01.T01:intron 35.0%
GATGGATATGATTTCCTGTA+TGG - Chr8:83038401-83038420 MsG0880047179.01.T01:intron 35.0%
GCAATCCCTAAAATAAACCT+AGG + Chr8:83036069-83036088 None:intergenic 35.0%
GCTCAAAAATTGGTTGTAGT+GGG - Chr8:83037331-83037350 MsG0880047179.01.T01:intron 35.0%
GGTGCCTACATTTAACATAA+AGG + Chr8:83038081-83038100 None:intergenic 35.0%
GTACTGCTCTTTGTATAGAA+TGG - Chr8:83037249-83037268 MsG0880047179.01.T01:intron 35.0%
GTTATGCATGTGTGTATGAA+TGG - Chr8:83037747-83037766 MsG0880047179.01.T01:intron 35.0%
TAGCAAAAACCAAACAGCAA+TGG + Chr8:83039633-83039652 None:intergenic 35.0%
TATATGCTGTTGAGTCAGAA+AGG - Chr8:83039064-83039083 MsG0880047179.01.T01:intron 35.0%
TCAACATTATGCGTATCTGA+TGG - Chr8:83038117-83038136 MsG0880047179.01.T01:intron 35.0%
TCAACATTATGCGTATGTGA+TGG - Chr8:83038383-83038402 MsG0880047179.01.T01:intron 35.0%
TCAGTGATTGATGTGTTTGT+TGG - Chr8:83037611-83037630 MsG0880047179.01.T01:intron 35.0%
TCCCTACTTACTATTCACTT+AGG + Chr8:83040195-83040214 None:intergenic 35.0%
TGAAACAAGTTCAGACTTGT+TGG - Chr8:83037166-83037185 MsG0880047179.01.T01:intron 35.0%
TGAACGATGCAAAGATTCTA+GGG + Chr8:83036184-83036203 None:intergenic 35.0%
TGCTAACGAACACATACAAT+AGG + Chr8:83039923-83039942 None:intergenic 35.0%
TGCTCAAAAATTGGTTGTAG+TGG - Chr8:83037330-83037349 MsG0880047179.01.T01:intron 35.0%
TTATGAATGGATGACCTGTT+GGG - Chr8:83038294-83038313 MsG0880047179.01.T01:intron 35.0%
TTGACGAAATTTCAGTTCCA+TGG + Chr8:83038969-83038988 None:intergenic 35.0%
TTGATTGAGTAAAATGGTGG+GGG - Chr8:83037548-83037567 MsG0880047179.01.T01:intron 35.0%
TTGTAAACTCCTTTGTTCAC+CGG - Chr8:83035317-83035336 MsG0880047179.01.T01:CDS 35.0%
TTGTGAATATCTTAGCACAC+TGG - Chr8:83039169-83039188 MsG0880047179.01.T01:intron 35.0%
TTGTGTGAACTTGTGCAATT+TGG - Chr8:83039210-83039229 MsG0880047179.01.T01:intron 35.0%
TTTATGACGTGGTTTCAGAA+TGG - Chr8:83037882-83037901 MsG0880047179.01.T01:intron 35.0%
! AAGGACGATTGTTGTTGTAA+GGG + Chr8:83035497-83035516 None:intergenic 35.0%
! CGGATAAATACCACGTATTT+TGG + Chr8:83036651-83036670 None:intergenic 35.0%
! CTTGGGTTTTTACATTTGAC+TGG - Chr8:83037432-83037451 MsG0880047179.01.T01:intron 35.0%
! TGGTCTTTTCGACAACTAAA+TGG + Chr8:83038928-83038947 None:intergenic 35.0%
! TTTCTGATTGAAGGTGTATC+CGG + Chr8:83036012-83036031 None:intergenic 35.0%
! TTTTGCTTCTTCGTGATCAT+AGG - Chr8:83038194-83038213 MsG0880047179.01.T01:intron 35.0%
!! AGGGTGTTATTTAGTGGAAT+TGG - Chr8:83040040-83040059 MsG0880047179.01.T01:CDS 35.0%
!! ATTCTGAAACCACGTCATAA+AGG + Chr8:83037883-83037902 None:intergenic 35.0%
!! CACATATTTTAGAAGTCAGG+TGG - Chr8:83038507-83038526 MsG0880047179.01.T01:intron 35.0%
!! CACTGATTTATCTGCACTAA+TGG + Chr8:83039577-83039596 None:intergenic 35.0%
!! CAGCACATATTTTAGAAGTC+AGG - Chr8:83038504-83038523 MsG0880047179.01.T01:intron 35.0%
!! TAGTCTTGTACTTCTAGCTA+TGG - Chr8:83036478-83036497 MsG0880047179.01.T01:intron 35.0%
!! TTTTGCTACTTCGTGATCAT+AGG - Chr8:83037924-83037943 MsG0880047179.01.T01:intron 35.0%
!!! AAGTTCAGACTTGTTGGTTT+TGG - Chr8:83037172-83037191 MsG0880047179.01.T01:intron 35.0%
!!! CTGTGAATATTTTAGCACAC+TGG - Chr8:83039291-83039310 MsG0880047179.01.T01:intron 35.0%
AAAACTACAGAAGATCCCAC+AGG + Chr8:83039804-83039823 None:intergenic 40.0%
AAAGTTCGGCTGACAAAGTA+CGG - Chr8:83037575-83037594 MsG0880047179.01.T01:intron 40.0%
AATGAAACAGAGAAGCCAGA+TGG + Chr8:83039090-83039109 None:intergenic 40.0%
ACAGAATCAACAAACTCACC+CGG + Chr8:83035780-83035799 None:intergenic 40.0%
ACCCGTATTAGTGTTGTGTT+CGG + Chr8:83035929-83035948 None:intergenic 40.0%
ACCGAACACAACACTAATAC+GGG - Chr8:83035925-83035944 MsG0880047179.01.T01:intron 40.0%
ACTCATGCAAAATCTTCCCT+TGG + Chr8:83039378-83039397 None:intergenic 40.0%
AGCACACTGGTGAATATTTC+TGG - Chr8:83039182-83039201 MsG0880047179.01.T01:intron 40.0%
ATCCAAATTCATCACCACCA+CGG + Chr8:83035689-83035708 None:intergenic 40.0%
CAACAGGTCATCCATTCATA+AGG + Chr8:83038295-83038314 None:intergenic 40.0%
CACCGAACACAACACTAATA+CGG - Chr8:83035924-83035943 MsG0880047179.01.T01:intron 40.0%
CATAATCGACATACTCTTCC+CGG - Chr8:83040147-83040166 MsG0880047179.01.T01:five_prime_UTR 40.0%
CATGAAAGTTGGATTCTCCA+TGG - Chr8:83038949-83038968 MsG0880047179.01.T01:intron 40.0%
CTAATCACAGACCTATGATC+AGG + Chr8:83038473-83038492 None:intergenic 40.0%
CTTATGAATGGATGACCTGT+TGG - Chr8:83038293-83038312 MsG0880047179.01.T01:intron 40.0%
CTTCAATCAGAAATGTCGGT+GGG - Chr8:83036019-83036038 MsG0880047179.01.T01:intron 40.0%
GAAGCTAGTGGAATATGACT+TGG - Chr8:83036698-83036717 MsG0880047179.01.T01:intron 40.0%
GGAGAATCCAACTTTCATGA+TGG + Chr8:83038948-83038967 None:intergenic 40.0%
GTAGTCACATGTGTTTGTGT+CGG - Chr8:83035983-83036002 MsG0880047179.01.T01:intron 40.0%
GTTGTAGTTCATCGGAGAAT+CGG + Chr8:83035538-83035557 None:intergenic 40.0%
TAATCTTATGACAGGTGAGG+AGG + Chr8:83039755-83039774 None:intergenic 40.0%
TATATTGCACTGTAGCTGTG+TGG - Chr8:83039535-83039554 MsG0880047179.01.T01:intron 40.0%
TATGAATGGATGACCTGTTG+GGG - Chr8:83038295-83038314 MsG0880047179.01.T01:intron 40.0%
TCAACAATATCCACAACCCA+TGG + Chr8:83036161-83036180 None:intergenic 40.0%
TGACAGTGCGAAAATCTCTA+CGG - Chr8:83036352-83036371 MsG0880047179.01.T01:intron 40.0%
TGTATAGAATGGGATCTTCG+AGG - Chr8:83037260-83037279 MsG0880047179.01.T01:intron 40.0%
TGTATGAATCGATGACCTGT+TGG - Chr8:83038025-83038044 MsG0880047179.01.T01:intron 40.0%
TGTATGGTGTGGTTTCAGAA+TGG - Chr8:83038417-83038436 MsG0880047179.01.T01:intron 40.0%
TGTGAACTTGTGCAATTTGG+TGG - Chr8:83039213-83039232 MsG0880047179.01.T01:intron 40.0%
TTTCGACAACTAAATGGCAC+TGG + Chr8:83038922-83038941 None:intergenic 40.0%
! AATTACTTTAGAAGTCGGGG+TGG - Chr8:83037982-83038001 MsG0880047179.01.T01:intron 40.0%
! ATCTGGCTTCTCTGTTTCAT+TGG - Chr8:83039089-83039108 MsG0880047179.01.T01:intron 40.0%
! ATTGCAAGAGCAGGATCTTT+TGG + Chr8:83037287-83037306 None:intergenic 40.0%
! CTAGATTCGTCCTTTGTTTG+AGG - Chr8:83036970-83036989 MsG0880047179.01.T01:intron 40.0%
! GAAGGACGATTGTTGTTGTA+AGG + Chr8:83035498-83035517 None:intergenic 40.0%
! GAGGTGTTTGCATATTTGAC+TGG - Chr8:83038868-83038887 MsG0880047179.01.T01:CDS 40.0%
! GTACTTCTAGCTATGGTACT+GGG - Chr8:83036485-83036504 MsG0880047179.01.T01:intron 40.0%
! TGATTGAGTAAAATGGTGGG+GGG - Chr8:83037549-83037568 MsG0880047179.01.T01:intron 40.0%
! TGTACTTCTAGCTATGGTAC+TGG - Chr8:83036484-83036503 MsG0880047179.01.T01:intron 40.0%
! TGTTTCATGCCATTGCTGTT+TGG - Chr8:83039621-83039640 MsG0880047179.01.T01:intron 40.0%
! TTTTGCCTCTTCCTGATCAT+AGG - Chr8:83038709-83038728 MsG0880047179.01.T01:intron 40.0%
!! AAATGGCACTGGTACCTAAA+CGG + Chr8:83038911-83038930 None:intergenic 40.0%
!! ATTCTGAAACCACACCATAC+AGG + Chr8:83038418-83038437 None:intergenic 40.0%
AAAACCACTACCAACCCTAC+CGG + Chr8:83035636-83035655 None:intergenic 45.0%
AATTGTAGCTGCAGAAGTGG+GGG - Chr8:83037304-83037323 MsG0880047179.01.T01:intron 45.0%
ACAACAACAATCGTCCTTCC+AGG - Chr8:83035499-83035518 MsG0880047179.01.T01:CDS 45.0%
ACAGACCTATGATCAGGAAG+AGG + Chr8:83038717-83038736 None:intergenic 45.0%
ACTCAGAAATCACGTCGTAC+AGG + Chr8:83038670-83038689 None:intergenic 45.0%
AGAAAGACAGGACAGCATCA+AGG - Chr8:83037031-83037050 MsG0880047179.01.T01:intron 45.0%
AGGGTAATCATCGTCGTTGT+TGG + Chr8:83035478-83035497 None:intergenic 45.0%
ATACGGGCGTAGTTTCAGAA+TGG - Chr8:83038152-83038171 MsG0880047179.01.T01:intron 45.0%
ATTATGAATGGCTGACCCGT+TGG - Chr8:83037655-83037674 MsG0880047179.01.T01:intron 45.0%
CAATTGTAGCTGCAGAAGTG+GGG - Chr8:83037303-83037322 MsG0880047179.01.T01:intron 45.0%
CCACCGACATTTCTGATTGA+AGG + Chr8:83036021-83036040 None:intergenic 45.0%
CCTTCAATCAGAAATGTCGG+TGG - Chr8:83036018-83036037 MsG0880047179.01.T01:intron 45.0%
GATGCTGTTGATCCTTTGCA+TGG - Chr8:83036222-83036241 MsG0880047179.01.T01:intron 45.0%
GCAATTGTAGCTGCAGAAGT+GGG - Chr8:83037302-83037321 MsG0880047179.01.T01:intron 45.0%
GCTTCTTCGTGATCATAGGT+CGG - Chr8:83038198-83038217 MsG0880047179.01.T01:intron 45.0%
GGTTGACAGTATCCATGCAA+AGG + Chr8:83036237-83036256 None:intergenic 45.0%
GTGTAGACGTTGCAGTTTAG+TGG - Chr8:83039334-83039353 MsG0880047179.01.T01:intron 45.0%
GTTTCAGAATGGTGCTCACT+TGG - Chr8:83038163-83038182 MsG0880047179.01.T01:intron 45.0%
GTTTCAGAATGGTGTTTGCG+TGG - Chr8:83037893-83037912 MsG0880047179.01.T01:intron 45.0%
TGACAGGTCGAGGAAAAAAG+TGG + Chr8:83037200-83037219 None:intergenic 45.0%
TGATTGTCGTCATCCCAAAC+AGG + Chr8:83038810-83038829 None:intergenic 45.0%
TGATTTCTGAGTGGTGTGCT+TGG - Chr8:83038678-83038697 MsG0880047179.01.T01:intron 45.0%
TGCAATTGTAGCTGCAGAAG+TGG - Chr8:83037301-83037320 MsG0880047179.01.T01:intron 45.0%
TGGGGGCTTTGCTCAAAAAT+TGG - Chr8:83037321-83037340 MsG0880047179.01.T01:intron 45.0%
TGTACGACGTGATTTCTGAG+TGG - Chr8:83038669-83038688 MsG0880047179.01.T01:intron 45.0%
TGTATGAATGGATGACCCGT+TGG - Chr8:83037759-83037778 MsG0880047179.01.T01:intron 45.0%
TTAATCTGAGAGCCGTGATG+TGG - Chr8:83036676-83036695 MsG0880047179.01.T01:intron 45.0%
TTCCCGTGTTCCTCAAACAA+AGG + Chr8:83036983-83037002 None:intergenic 45.0%
TTTCACTCTGTTCGCCAAAC+TGG - Chr8:83035425-83035444 MsG0880047179.01.T01:intron 45.0%
! ATCTTCCTCAGTTGCTGTTC+GGG + Chr8:83036812-83036831 None:intergenic 45.0%
! CATCTTCCTCAGTTGCTGTT+CGG + Chr8:83036813-83036832 None:intergenic 45.0%
! CGTCCTTTGTTTGAGGAACA+CGG - Chr8:83036977-83036996 MsG0880047179.01.T01:intron 45.0%
! CTGATGTTGCCCTGTGTTTT+GGG - Chr8:83036093-83036112 MsG0880047179.01.T01:CDS 45.0%
! GGGAGATTGGCATTTTCCAT+GGG - Chr8:83036142-83036161 MsG0880047179.01.T01:CDS 45.0%
! GTAGTCATCTGAGATAGCAG+AGG - Chr8:83038849-83038868 MsG0880047179.01.T01:CDS 45.0%
! GTCCTTTGTTTGAGGAACAC+GGG - Chr8:83036978-83036997 MsG0880047179.01.T01:intron 45.0%
! TGATGTTGCCCTGTGTTTTG+GGG - Chr8:83036094-83036113 MsG0880047179.01.T01:CDS 45.0%
! TGCATGAGCTTGTTCTACCT+AGG - Chr8:83036049-83036068 MsG0880047179.01.T01:intron 45.0%
! TGGGAGATTGGCATTTTCCA+TGG - Chr8:83036141-83036160 MsG0880047179.01.T01:CDS 45.0%
! TTCCACTAGCTTCCACATCA+CGG + Chr8:83036691-83036710 None:intergenic 45.0%
! TTCTTTGCACCGGTGAACAA+AGG + Chr8:83035329-83035348 None:intergenic 45.0%
! TTTCTTTCAGGTCCTCTGAG+AGG - Chr8:83037099-83037118 MsG0880047179.01.T01:intron 45.0%
!! AAAAGCACTACACTCACTCC+GGG + Chr8:83040168-83040187 None:intergenic 45.0%
!! ACTGGGTTAGTTGCAACTGT+TGG - Chr8:83036502-83036521 MsG0880047179.01.T01:intron 45.0%
!! CAAAAGCACTACACTCACTC+CGG + Chr8:83040169-83040188 None:intergenic 45.0%
!! CTTTCTGTTGGTGGTTGTTG+GGG - Chr8:83040014-83040033 MsG0880047179.01.T01:CDS 45.0%
!! GCTTTCTGTTGGTGGTTGTT+GGG - Chr8:83040013-83040032 MsG0880047179.01.T01:CDS 45.0%
!! GTGGGAGTGTTTGTTGCTAT+AGG - Chr8:83037349-83037368 MsG0880047179.01.T01:intron 45.0%
!! TTCTGAAACTACGCCCGTAT+AGG + Chr8:83038152-83038171 None:intergenic 45.0%
!! TTGGCATTTTCCATGGGTTG+TGG - Chr8:83036148-83036167 MsG0880047179.01.T01:CDS 45.0%
!! TTTCTGTTGGTGGTTGTTGG+GGG - Chr8:83040015-83040034 MsG0880047179.01.T01:CDS 45.0%
ACCATCAACCACATCGCCAA+CGG + Chr8:83037674-83037693 None:intergenic 50.0%
ATCAGCATACCGCACTTGGA+TGG + Chr8:83040278-83040297 None:intergenic 50.0%
ATCCAAGTGCGGTATGCTGA+TGG - Chr8:83040277-83040296 MsG0880047179.01.T01:five_prime_UTR 50.0%
ATCGGAGAAACGAGAAGTCC+TGG + Chr8:83035520-83035539 None:intergenic 50.0%
ATTGCACTGTAGCTGTGTGG+TGG - Chr8:83039538-83039557 MsG0880047179.01.T01:intron 50.0%
CATGTGTTTGTGTCGGACAC+CGG - Chr8:83035990-83036009 MsG0880047179.01.T01:intron 50.0%
CCAATCTCCCCCAAAACACA+GGG + Chr8:83036105-83036124 None:intergenic 50.0%
CGACGGTGGTTGTAGTTCAT+CGG + Chr8:83035546-83035565 None:intergenic 50.0%
CGGCTCTCAGATTAACGCAA+CGG + Chr8:83036671-83036690 None:intergenic 50.0%
CTCGACCTGTCATACCTGAA+GGG - Chr8:83037208-83037227 MsG0880047179.01.T01:intron 50.0%
CTCTGTTCGCCAAACTGGAT+AGG - Chr8:83035430-83035449 MsG0880047179.01.T01:intron 50.0%
GACTATCAAAGTTGCTGCGG+TGG + Chr8:83035599-83035618 None:intergenic 50.0%
GAGAAACGAGAAGTCCTGGA+AGG + Chr8:83035516-83035535 None:intergenic 50.0%
GCAGCTACAATTGCAAGAGC+AGG + Chr8:83037296-83037315 None:intergenic 50.0%
GGGGACTATCAAAGTTGCTG+CGG + Chr8:83035602-83035621 None:intergenic 50.0%
GTTGAGTCAGAAAGGCCATC+TGG - Chr8:83039072-83039091 MsG0880047179.01.T01:intron 50.0%
GTTTGAGGAACACGGGAATG+TGG - Chr8:83036985-83037004 MsG0880047179.01.T01:intron 50.0%
TACCTCAGAGGAAGCTGATC+AGG - Chr8:83040110-83040129 MsG0880047179.01.T01:five_prime_UTR 50.0%
TCAGCATACCGCACTTGGAT+GGG + Chr8:83040277-83040296 None:intergenic 50.0%
TCCTCTGTGCCTATCCAGTT+TGG + Chr8:83035442-83035461 None:intergenic 50.0%
TCGACCTGTCATACCTGAAG+GGG - Chr8:83037209-83037228 MsG0880047179.01.T01:intron 50.0%
TCTGCTCAGTGGCTTTCTGT+TGG - Chr8:83040002-83040021 MsG0880047179.01.T01:CDS 50.0%
TGGTACCTAAACGGACCAGT+GGG + Chr8:83038902-83038921 None:intergenic 50.0%
TTGTCGTCATCCCAAACAGG+TGG + Chr8:83038807-83038826 None:intergenic 50.0%
! ATGGTGGGGGGCATAAAGTT+CGG - Chr8:83037561-83037580 MsG0880047179.01.T01:intron 50.0%
! CACGTGCTGCTCTTGATGTT+TGG - Chr8:83039722-83039741 MsG0880047179.01.T01:intron 50.0%
! GACCGTGGTGGTGATGAATT+TGG - Chr8:83035684-83035703 MsG0880047179.01.T01:intron 50.0%
! GCTGATGTTGCCCTGTGTTT+TGG - Chr8:83036092-83036111 MsG0880047179.01.T01:CDS 50.0%
! GGGAGATTGGCATTTTCCGT+GGG - Chr8:83036115-83036134 MsG0880047179.01.T01:CDS 50.0%
! TCTTCCTCAGTTGCTGTTCG+GGG + Chr8:83036811-83036830 None:intergenic 50.0%
!! GATGTTGCCCTGTGTTTTGG+GGG - Chr8:83036095-83036114 MsG0880047179.01.T01:CDS 50.0%
!! GGCTTTCTGTTGGTGGTTGT+TGG - Chr8:83040012-83040031 MsG0880047179.01.T01:CDS 50.0%
!! TGGCATTTTCCGTGGGTTGT+GGG - Chr8:83036122-83036141 MsG0880047179.01.T01:CDS 50.0%
!! TTGGCATTTTCCGTGGGTTG+TGG - Chr8:83036121-83036140 MsG0880047179.01.T01:CDS 50.0%
AAACGCGGGTTTCCGTTCTC+TGG - Chr8:83035741-83035760 MsG0880047179.01.T01:intron 55.0%
AGCCGTGATGTGGAAGCTAG+TGG - Chr8:83036686-83036705 MsG0880047179.01.T01:intron 55.0%
AGGCACAGAGGAAACCGCTA+CGG - Chr8:83035450-83035469 MsG0880047179.01.T01:intron 55.0%
CCATCAACCACATCCCCAAC+AGG + Chr8:83038568-83038587 None:intergenic 55.0%
CCATCAACCACATCGCCAAC+GGG + Chr8:83037673-83037692 None:intergenic 55.0%
CCATCAACCATGTCGCCAAC+AGG + Chr8:83038311-83038330 None:intergenic 55.0%
CCGCGTTTCTGACCAGACAA+CGG + Chr8:83035729-83035748 None:intergenic 55.0%
CCGTTGTCTGGTCAGAAACG+CGG - Chr8:83035726-83035745 MsG0880047179.01.T01:intron 55.0%
CCTCGACCTGTCATACCTGA+AGG - Chr8:83037207-83037226 MsG0880047179.01.T01:intron 55.0%
CCTGTTGGCGACATGGTTGA+TGG - Chr8:83038308-83038327 MsG0880047179.01.T01:intron 55.0%
CCTGTTGGGGATGTGGTTGA+TGG - Chr8:83038565-83038584 MsG0880047179.01.T01:CDS 55.0%
CCTTCAGGTATGACAGGTCG+AGG + Chr8:83037210-83037229 None:intergenic 55.0%
CGTTGTCTGGTCAGAAACGC+GGG - Chr8:83035727-83035746 MsG0880047179.01.T01:intron 55.0%
CGTTTCTGACCAGACAACGG+CGG + Chr8:83035726-83035745 None:intergenic 55.0%
CTACAACCACCGTCGAAGTC+CGG - Chr8:83035551-83035570 MsG0880047179.01.T01:CDS 55.0%
CTGGTACCTAAACGGACCAG+TGG + Chr8:83038903-83038922 None:intergenic 55.0%
CTTCCCTATCAGCCTCTCAG+AGG + Chr8:83037114-83037133 None:intergenic 55.0%
GCCAAACTGGATAGGCACAG+AGG - Chr8:83035438-83035457 MsG0880047179.01.T01:intron 55.0%
GCCAATCTCCCCCAAAACAC+AGG + Chr8:83036106-83036125 None:intergenic 55.0%
GCTCAGTGGCTTTCTGTTGG+TGG - Chr8:83040005-83040024 MsG0880047179.01.T01:CDS 55.0%
GGAACACGGGAATGTGGTTG+AGG - Chr8:83036991-83037010 MsG0880047179.01.T01:intron 55.0%
TACAACCACCGTCGAAGTCC+GGG - Chr8:83035552-83035571 MsG0880047179.01.T01:CDS 55.0%
TCAAAGTTGCTGCGGTGGAG+AGG + Chr8:83035594-83035613 None:intergenic 55.0%
TGACTGGATCTGCTACCCAC+TGG - Chr8:83038884-83038903 MsG0880047179.01.T01:intron 55.0%
TGCCAATCTCCCACAACCCA+CGG + Chr8:83036134-83036153 None:intergenic 55.0%
TGCCTGATCAGCTTCCTCTG+AGG + Chr8:83040115-83040134 None:intergenic 55.0%
TGCTACCCACTGGTCCGTTT+AGG - Chr8:83038894-83038913 MsG0880047179.01.T01:intron 55.0%
TGGATGACCTGTTGGCGACA+TGG - Chr8:83038301-83038320 MsG0880047179.01.T01:intron 55.0%
TGGATGACCTGTTGGGGATG+TGG - Chr8:83038558-83038577 MsG0880047179.01.T01:CDS 55.0%
TGTTCCCCGAACAGCAACTG+AGG - Chr8:83036804-83036823 MsG0880047179.01.T01:intron 55.0%
TTACATCTCTCGGCCCCTTC+AGG + Chr8:83037225-83037244 None:intergenic 55.0%
! ACTTTGATAGTCCCCCGCGA+TGG - Chr8:83035607-83035626 MsG0880047179.01.T01:CDS 55.0%
! AGGTCCTCTGAGAGGCTGAT+AGG - Chr8:83037107-83037126 MsG0880047179.01.T01:intron 55.0%
! GAAGCACCACGACCAGAGAA+CGG + Chr8:83035756-83035775 None:intergenic 55.0%
! GGGGAGATTGGCATTTTCCG+TGG - Chr8:83036114-83036133 MsG0880047179.01.T01:CDS 55.0%
! GGTCCTCTGAGAGGCTGATA+GGG - Chr8:83037108-83037127 MsG0880047179.01.T01:intron 55.0%
! GTGTTGGTCCCATCCAAGTG+CGG - Chr8:83040266-83040285 MsG0880047179.01.T01:five_prime_UTR 55.0%
! TGCGGTATGCTGATGGCGAA+CGG - Chr8:83040284-83040303 MsG0880047179.01.T01:five_prime_UTR 55.0%
! TTCCGTGGGTTGTGGGAGAT+TGG - Chr8:83036129-83036148 MsG0880047179.01.T01:CDS 55.0%
!! GGGGCGAGGGTGTTATTTAG+TGG - Chr8:83040034-83040053 MsG0880047179.01.T01:CDS 55.0%
!!! CCCTGTGTTTTGGGGGAGAT+TGG - Chr8:83036102-83036121 MsG0880047179.01.T01:CDS 55.0%
AACCCTACCGGAGACCATCG+CGG + Chr8:83035624-83035643 None:intergenic 60.0%
CCATCAACCACGTCGCCAAC+AGG + Chr8:83038043-83038062 None:intergenic 60.0%
CCCGTTGGCGATGTGGTTGA+TGG - Chr8:83037670-83037689 MsG0880047179.01.T01:intron 60.0%
CCTGTTGGCGACGTGGTTGA+TGG - Chr8:83038040-83038059 MsG0880047179.01.T01:intron 60.0%
CGCCATCAGCATACCGCACT+TGG + Chr8:83040282-83040301 None:intergenic 60.0%
CTCTGGTCGTGGTGCTTCAC+CGG - Chr8:83035758-83035777 MsG0880047179.01.T01:intron 60.0%
GAGATGGCTTCAGACCGTGG+TGG - Chr8:83035672-83035691 MsG0880047179.01.T01:intron 60.0%
GGAAACCACCCGGACTTCGA+CGG + Chr8:83035563-83035582 None:intergenic 60.0%
GGGTTTCCGTTCTCTGGTCG+TGG - Chr8:83035747-83035766 MsG0880047179.01.T01:intron 60.0%
TCGATGACCTGTTGGCGACG+TGG - Chr8:83038033-83038052 MsG0880047179.01.T01:intron 60.0%
TCGGCCCCTTCAGGTATGAC+AGG + Chr8:83037216-83037235 None:intergenic 60.0%
TCTGGTCGTGGTGCTTCACC+GGG - Chr8:83035759-83035778 MsG0880047179.01.T01:intron 60.0%
TGGATGACCCGTTGGCGATG+TGG - Chr8:83037767-83037786 MsG0880047179.01.T01:intron 60.0%
TTCTGACCAGACAACGGCGG+TGG + Chr8:83035723-83035742 None:intergenic 60.0%
! CCACGGTCTGAAGCCATCTC+CGG + Chr8:83035672-83035691 None:intergenic 60.0%
! GCGGTATGCTGATGGCGAAC+GGG - Chr8:83040285-83040304 MsG0880047179.01.T01:five_prime_UTR 60.0%
! GGTTTTCGTCCACCACCTGC+CGG - Chr8:83035650-83035669 MsG0880047179.01.T01:intron 60.0%
! TTGGTGGTTGTTGGGGGCGA+GGG - Chr8:83040021-83040040 MsG0880047179.01.T01:CDS 60.0%
!! GTCTCCGGTAGGGTTGGTAG+TGG - Chr8:83035629-83035648 MsG0880047179.01.T01:intron 60.0%
AACCACCCGGACTTCGACGG+TGG + Chr8:83035560-83035579 None:intergenic 65.0%
AACCACCGTCGAAGTCCGGG+TGG - Chr8:83035555-83035574 MsG0880047179.01.T01:CDS 65.0%
AAGCCATCTCCGGCAGGTGG+TGG + Chr8:83035662-83035681 None:intergenic 65.0%
ACCCTACCGGAGACCATCGC+GGG + Chr8:83035623-83035642 None:intergenic 65.0%
CCGGAGATGGCTTCAGACCG+TGG - Chr8:83035669-83035688 MsG0880047179.01.T01:intron 65.0%
CGTCGTTGTTGGCGCCGTAG+CGG + Chr8:83035467-83035486 None:intergenic 65.0%
CTGAAGCCATCTCCGGCAGG+TGG + Chr8:83035665-83035684 None:intergenic 65.0%
GATGGCGAACGGGAACGCCT+TGG - Chr8:83040295-83040314 MsG0880047179.01.T01:five_prime_UTR 65.0%
GCGATGGTCTCCGGTAGGGT+TGG - Chr8:83035623-83035642 MsG0880047179.01.T01:intron 65.0%
GTTGCTGCGGTGGAGAGGAG+CGG + Chr8:83035589-83035608 None:intergenic 65.0%
TAGTCCCCCGCGATGGTCTC+CGG - Chr8:83035614-83035633 MsG0880047179.01.T01:CDS 65.0%
TGACCAGACAACGGCGGTGG+TGG + Chr8:83035720-83035739 None:intergenic 65.0%
TGGCTGACCCGTTGGCGATG+TGG - Chr8:83037663-83037682 MsG0880047179.01.T01:intron 65.0%
TTGCTGCGGTGGAGAGGAGC+GGG + Chr8:83035588-83035607 None:intergenic 65.0%
! GGTCTGAAGCCATCTCCGGC+AGG + Chr8:83035668-83035687 None:intergenic 65.0%
!! GTTGGTGGTTGTTGGGGGCG+AGG - Chr8:83040020-83040039 MsG0880047179.01.T01:CDS 65.0%
CCCCGCGATGGTCTCCGGTA+GGG - Chr8:83035619-83035638 MsG0880047179.01.T01:intron 70.0%
CCCTACCGGAGACCATCGCG+GGG + Chr8:83035622-83035641 None:intergenic 70.0%
CCTACCGGAGACCATCGCGG+GGG + Chr8:83035621-83035640 None:intergenic 70.0%
CGTCCACCACCTGCCGGAGA+TGG - Chr8:83035656-83035675 MsG0880047179.01.T01:intron 70.0%
CTGCCACCACCGCCGTTGTC+TGG - Chr8:83035714-83035733 MsG0880047179.01.T01:intron 70.0%
TGCTGCGGTGGAGAGGAGCG+GGG + Chr8:83035587-83035606 None:intergenic 70.0%
! CAGACAACGGCGGTGGTGGC+AGG + Chr8:83035716-83035735 None:intergenic 70.0%
CCCCCGCGATGGTCTCCGGT+AGG - Chr8:83035618-83035637 MsG0880047179.01.T01:CDS 75.0%
GGAGCGGGGCGGAAACCACC+CGG + Chr8:83035573-83035592 None:intergenic 75.0%
TGCGGTGGAGAGGAGCGGGG+CGG + Chr8:83035584-83035603 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 83035266 83040382 83035266 ID=MsG0880047179.01;Name=MsG0880047179.01
Chr8 mRNA 83035266 83040382 83035266 ID=MsG0880047179.01.T01;Parent=MsG0880047179.01;Name=MsG0880047179.01.T01;_AED=0.55;_eAED=0.57;_QI=280|0.6|0.33|0.83|0.4|0.5|6|0|276
Chr8 exon 83035266 83035383 83035266 ID=MsG0880047179.01.T01:exon:35495;Parent=MsG0880047179.01.T01
Chr8 exon 83035478 83035637 83035478 ID=MsG0880047179.01.T01:exon:35494;Parent=MsG0880047179.01.T01
Chr8 exon 83036069 83036196 83036069 ID=MsG0880047179.01.T01:exon:35493;Parent=MsG0880047179.01.T01
Chr8 exon 83038556 83038674 83038556 ID=MsG0880047179.01.T01:exon:35492;Parent=MsG0880047179.01.T01
Chr8 exon 83038817 83038887 83038817 ID=MsG0880047179.01.T01:exon:35491;Parent=MsG0880047179.01.T01
Chr8 exon 83039868 83040382 83039868 ID=MsG0880047179.01.T01:exon:35490;Parent=MsG0880047179.01.T01
Chr8 five_prime_UTR 83040103 83040382 83040103 ID=MsG0880047179.01.T01:five_prime_utr;Parent=MsG0880047179.01.T01
Chr8 CDS 83039868 83040102 83039868 ID=MsG0880047179.01.T01:cds;Parent=MsG0880047179.01.T01
Chr8 CDS 83038817 83038887 83038817 ID=MsG0880047179.01.T01:cds;Parent=MsG0880047179.01.T01
Chr8 CDS 83038556 83038674 83038556 ID=MsG0880047179.01.T01:cds;Parent=MsG0880047179.01.T01
Chr8 CDS 83036069 83036196 83036069 ID=MsG0880047179.01.T01:cds;Parent=MsG0880047179.01.T01
Chr8 CDS 83035478 83035637 83035478 ID=MsG0880047179.01.T01:cds;Parent=MsG0880047179.01.T01
Chr8 CDS 83035266 83035383 83035266 ID=MsG0880047179.01.T01:cds;Parent=MsG0880047179.01.T01
Gene Sequence

>MsG0880047179.01.T01

ATGAACTACAACCACCGTCGAAGTCCGGGTGGTTTCCGCCCCGCTCCTCTCCACCGCAGCAACTTTGATAGTCCCCCGCGATGGTCTCCGGTAGGGTTGGTAGTGGTTTTCGTCCACCACCTGCCGGAGATGGCTTCAGACCGTGGTGGTGATGAATTTGGATTCAACCTGCCACCACCGCCGTTGTCTGGTCAGAAACGCGGGTTTCCGTTCTCTGGTCGTGGTGCTTCACCGGATCATTCTGATGGTGGAAATTTTGCCAAACTTTTTGTTGGGTCTGTTCCCCGAACAGCAACTGAGGAAGATATTCGTCCTTTGTTTGAGGAACACGGGAATGTGGTTGAGGTTGCCCTGATCAAAGATAGAAAGACAGGACAGCATCAAGGTATTTGTGATTCTTATATTCTAAGACTGTTGCGATTCATAGGATACAATGTCAACTCTGATATGAGATGTGAAATAGAAGGTGTTTATTTTCTTGACGAAGATTATGAACTAGTCAGTTATTTATATTGCACTGTAGCTGTGTGGTGGCTTGTAAGCTTCACCATTATGGCTTTCTGTTGGTGGTTGTTGGGGGCGAGGGTGTTATTTAGTGGAATTGGCATAAAACACCTTTTATTGTGCAGGTTGTTGTTTTATAAAATAATGCTACCTCAGAGGAAGCTGATCAGGCAATTAGAGCATTGCATAATCGACATACTCTTCCCGGAGGTGTTGGTCCCATCCAAGTGCGGTATGCTGATGGCGAACGGGAACGCCTTGGTAACTATTTTTTTCTCCTTACATTGTTTAGTCTGTAAAATTCTTATTGCAACATGTGTAGTATAG
Protein sequence

>MsG0880047179.01.T01

MNYNHRRSPGGFRPAPLHRSNFDSPPRWSPVGLVVVFVHHLPEMASDRGGDEFGFNLPPPPLSGQKRGFPFSGRGASPDHSDGGNFAKLFVGSVPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQGICDSYILRLLRFIGYNVNSDMRCEIEGVYFLDEDYELVSYLYCTVAVWWLVSFTIMAFCWWLLGARVLFSGIGIKHLLLCRLLFYKIMLPQRKLIRQLEHCIIDILFPEVLVPSKCGMLMANGNALVTIFFSLHCLVCKILIATCVV*