AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000010.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000010.01.T01 MTR_1g026290 96.371 992 24 5 1 989 1 983 0.0 1883
MsG0180000010.01.T01 MTR_1g026290 95.984 996 24 6 1 989 1 987 0.0 1878
MsG0180000010.01.T01 MTR_1g026290 95.939 911 28 4 14 924 17 918 0.0 1699
MsG0180000010.01.T01 MTR_1g026290 96.044 910 27 4 14 923 17 917 0.0 1698
MsG0180000010.01.T01 MTR_1g026290 97.013 770 15 3 220 989 1 762 0.0 1471
MsG0180000010.01.T01 MTR_4g116370 34.423 520 280 16 10 493 11 505 1.55e-59 218
MsG0180000010.01.T01 MTR_4g116370 34.423 520 280 16 10 493 19 513 1.87e-59 218
MsG0180000010.01.T01 MTR_4g116370 33.002 503 278 16 29 493 10 491 1.59e-51 194
MsG0180000010.01.T01 MTR_4g116370 30.808 396 226 13 134 493 34 417 6.51e-30 127
MsG0180000010.01.T01 MTR_4g116370 33.216 283 161 9 234 493 58 335 1.87e-26 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000010.01.T01 AT5G42220 46.457 889 377 25 1 856 1 823 0.0 609
MsG0180000010.01.T01 AT5G42220 46.457 889 377 25 1 856 1 823 0.0 609
MsG0180000010.01.T01 AT5G25270 34.752 423 226 14 24 429 20 409 3.05e-51 192
MsG0180000010.01.T01 AT5G11080 33.939 165 91 6 24 184 10 160 3.79e-13 72.4
MsG0180000010.01.T01 AT5G11080 33.939 165 91 6 24 184 10 160 8.11e-13 71.6

Find 337 sgRNAs with CRISPR-Local

Find 748 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTAGGGTGCACGGGTTTC+TGG 0.081281 1:-313307 None:intergenic
ATGTTCATCTGTGGGCTTTC+TGG 0.145540 1:-313112 None:intergenic
CTCTGTTCATTTACCTGTTC+AGG 0.186974 1:-310617 None:intergenic
CCCCAAATGGTTTATTAGTT+TGG 0.187385 1:+314643 MsG0180000010.01.T01:three_prime_UTR
CTTTCTTGTACAGGAATATT+TGG 0.188581 1:+314466 MsG0180000010.01.T01:intron
TGACAAACCTGCACCATTAT+AGG 0.224010 1:-308841 None:intergenic
AAGGGCTTCTGATGATCTTT+TGG 0.244313 1:+314302 MsG0180000010.01.T01:CDS
GCAGGTTGACAGTCAGGATA+TGG 0.259529 1:+313153 MsG0180000010.01.T01:CDS
GCAGGTTGGCAGTCAGGATA+TGG 0.262907 1:+312955 MsG0180000010.01.T01:CDS
GGGTGCACTTCTACTTGAAC+TGG 0.270093 1:+308642 MsG0180000010.01.T01:CDS
GAAGAAGTTTGTGCGGAATT+AGG 0.272535 1:-306596 None:intergenic
CCCTGCTAGTTGATTGCATT+TGG 0.273481 1:-310568 None:intergenic
AGGTTAGTTGAAGATATATT+TGG 0.275645 1:-307608 None:intergenic
GAGCCCGGTTCTGGTGATTC+AGG 0.283347 1:+310149 MsG0180000010.01.T01:CDS
TCATTTACCTGTTCAGGTCT+TGG 0.283401 1:-310611 None:intergenic
AAGCTGCTCGAAGGACGTTC+TGG 0.292892 1:+314512 MsG0180000010.01.T01:CDS
CTGTCAACCTGCTGGGCAAT+CGG 0.292962 1:-313142 None:intergenic
AGATAGATAGATAGATAGAT+AGG 0.301303 1:+305428 MsG0180000010.01.T01:five_prime_UTR
ACTAGCAGGGACTTGTCTTC+TGG 0.308253 1:+310581 MsG0180000010.01.T01:CDS
CTTGTCCCTTCCCCATTGTT+TGG 0.310487 1:-310110 None:intergenic
CAGTCCAAGAGGAGCAGTTT+TGG 0.314139 1:-310987 None:intergenic
TATTACCAACAGAGTTTCTA+AGG 0.317262 1:-310340 None:intergenic
AGGAATTGCTATGCAGCATT+TGG 0.319967 1:+308621 MsG0180000010.01.T01:CDS
ACCTGCACCATTATAGGATT+TGG 0.321015 1:-308835 None:intergenic
ATCCAAACTAATAAACCATT+TGG 0.325238 1:-314645 None:intergenic
GGGTTAGATGGGAGAGTTGC+TGG 0.327771 1:-310206 None:intergenic
ATGCTAACTGGAACGGAAAC+AGG 0.333341 1:+313181 MsG0180000010.01.T01:CDS
ATTCATATGCACATAAAATT+AGG 0.336442 1:-314546 None:intergenic
GCACCAATTGTTTCAGCAAT+TGG 0.338308 1:+310080 MsG0180000010.01.T01:CDS
TCCAAACTAATAAACCATTT+GGG 0.340321 1:-314644 None:intergenic
TCTTCAACTCCTGCAACTTT+AGG 0.346394 1:+309928 MsG0180000010.01.T01:CDS
GTAATATGGTTTCAGGTTAT+CGG 0.347026 1:+306524 MsG0180000010.01.T01:intron
CACCGTAGTGAGCCCGGTTC+TGG 0.349753 1:+310140 MsG0180000010.01.T01:CDS
TGTTGGATTGAGGTGATTAA+TGG 0.349927 1:+314730 MsG0180000010.01.T01:three_prime_UTR
CTTCAAACAAGCTCCTTGTT+TGG 0.351103 1:+309892 MsG0180000010.01.T01:CDS
ATGAGTCGTTGCTGATTAAC+TGG 0.353590 1:-305893 None:intergenic
GAACATGCACTCTCTCAAAA+TGG 0.354321 1:+307505 MsG0180000010.01.T01:CDS
ATGAGCGGACGTGGGGCTTC+CGG 0.360117 1:+310653 MsG0180000010.01.T01:CDS
ACAACTTTGTAAATCTTGAT+TGG 0.360242 1:-310882 None:intergenic
GCAGTTTATATTTCTCCATC+AGG 0.362139 1:+308811 MsG0180000010.01.T01:CDS
TTCTGATAATCGAAGTTTGC+AGG 0.364782 1:+313339 MsG0180000010.01.T01:CDS
TAATGATGAGAGAGATGTTT+TGG 0.365444 1:+310835 MsG0180000010.01.T01:CDS
TTGTGACTCTAGCATATTGC+AGG 0.375677 1:+308526 MsG0180000010.01.T01:intron
TTTCACACAGTGTGGTTCTT+GGG 0.376592 1:+306317 MsG0180000010.01.T01:CDS
GCTGCTGGCAGCACACCATC+TGG 0.377689 1:+310242 MsG0180000010.01.T01:CDS
GGAGCACTTCCAACACCAAC+GGG 0.378459 1:-309952 None:intergenic
CAGTCAGAGTCAGTACAAAT+AGG 0.378536 1:+308601 MsG0180000010.01.T01:CDS
CCTCTGCCCTCCTTCCGTTC+CGG 0.379314 1:-312990 None:intergenic
CCGATGCCAGAAGGGTTAGA+TGG 0.380811 1:-310218 None:intergenic
TTAATTTGATAAATGCTGAT+AGG 0.382229 1:+312729 MsG0180000010.01.T01:CDS
AGATGACAATGGAGCTGAAT+CGG 0.385957 1:-310294 None:intergenic
GATCCGTCATCAGCACCTTT+AGG 0.387358 1:-312620 None:intergenic
GGCAACCCTTGTGTATTAGA+AGG 0.388446 1:-307653 None:intergenic
ATTTCACACAGTGTGGTTCT+TGG 0.390711 1:+306316 MsG0180000010.01.T01:CDS
CTAAATAGTCCTGCTTTGAA+TGG 0.397811 1:+312815 MsG0180000010.01.T01:CDS
TAATATGGTTTCAGGTTATC+GGG 0.400102 1:+306525 MsG0180000010.01.T01:intron
TGCCCAGCAGGTTGGCAGTC+AGG 0.400197 1:+312949 MsG0180000010.01.T01:CDS
TGTTGCAACGAGAGTCTTGC+CGG 0.402364 1:+314333 MsG0180000010.01.T01:CDS
TGCCCAGCAGGTTGACAGTC+AGG 0.410461 1:+313147 MsG0180000010.01.T01:CDS
CGAACCTGAATCACCAGAAC+CGG 0.412370 1:-310153 None:intergenic
ATCAGGGCCAAATCCTATAA+TGG 0.413483 1:+308828 MsG0180000010.01.T01:CDS
ACTCTCCCATCTAACCCTTC+TGG 0.413671 1:+310212 MsG0180000010.01.T01:CDS
GTGCTCCTCGTAGCCGTGTT+GGG 0.414635 1:+306290 MsG0180000010.01.T01:CDS
GCTGGTATGACATTTCTAAC+AGG 0.415527 1:-310188 None:intergenic
TTGTCTTTGAACAGCGAAAC+GGG 0.418382 1:-305848 None:intergenic
AAGATTCTAGAGTCTTCGTT+CGG 0.420066 1:-305327 None:intergenic
ACCTTTAGGAGGTTGGAGTC+TGG 0.421199 1:-312606 None:intergenic
TTGTTCAGAAACATTGGTAC+TGG 0.424220 1:-305634 None:intergenic
ATCTGAACCAAGACCTGAAC+AGG 0.426549 1:+310604 MsG0180000010.01.T01:CDS
AGGAAATCAAGCTGGAAATC+AGG 0.426719 1:+307251 MsG0180000010.01.T01:CDS
GGTCAGCCCGATTGCCCAGC+AGG 0.428555 1:+313135 MsG0180000010.01.T01:CDS
GGAATTGCTATGCAGCATTT+GGG 0.432404 1:+308622 MsG0180000010.01.T01:CDS
GCTGGAAATCAGGCACCATC+TGG 0.433495 1:+307261 MsG0180000010.01.T01:CDS
TATCCTGACTGCCAACCTGC+TGG 0.435244 1:-312952 None:intergenic
TTGACTCACCTGATGGCTTA+AGG 0.438048 1:+312870 MsG0180000010.01.T01:CDS
CCAACGGGGCCTAAAGTTGC+AGG 0.440187 1:-309937 None:intergenic
GACAAAATTGCAACTGAAGT+AGG 0.442503 1:+305866 MsG0180000010.01.T01:CDS
ACGGAAACAGGGCAGGGTGG+TGG 0.443483 1:+313193 MsG0180000010.01.T01:CDS
TTCGCAGTGTTAACATAGTT+CGG 0.443754 1:-308666 None:intergenic
GAATGGCCATACATTGCATT+TGG 0.444494 1:+306070 MsG0180000010.01.T01:CDS
GATATGGGGAATATGCTAAC+TGG 0.446741 1:+313169 MsG0180000010.01.T01:CDS
TCACTGCCGGACCCCGTAGC+AGG 0.447048 1:-306122 None:intergenic
CTTTGAATGGTTTGTTGGAA+GGG 0.448136 1:+312828 MsG0180000010.01.T01:CDS
TATCCTGACTGTCAACCTGC+TGG 0.448937 1:-313150 None:intergenic
CCTGCCAAAACTGCTCCTCT+TGG 0.448981 1:+310983 MsG0180000010.01.T01:CDS
CCTTCTGGCATCGGAGCTGC+TGG 0.449331 1:+310227 MsG0180000010.01.T01:CDS
AAAGGAAACAATGTTGGATC+AGG 0.451832 1:+306268 MsG0180000010.01.T01:intron
CGTACAGAACAGTTGCTTAG+TGG 0.453630 1:+307707 MsG0180000010.01.T01:CDS
GTGTTGAGGGAATGGGGAAT+TGG 0.453924 1:-307457 None:intergenic
ACTGCGAATGGGACAGTCTT+CGG 0.454831 1:+308681 MsG0180000010.01.T01:CDS
TCCTATCAGCCACTGGTTGA+AGG 0.458836 1:-314206 None:intergenic
CATACAGTGTGTTGAGGGAA+TGG 0.458969 1:-307465 None:intergenic
TAATTCCGCACAAACTTCTT+CGG 0.459355 1:+306598 MsG0180000010.01.T01:CDS
ACGGAAGGAGGGCAGAGGGG+TGG 0.459563 1:+312995 MsG0180000010.01.T01:CDS
GAGCCAATTGCTGAAACAAT+TGG 0.459970 1:-310083 None:intergenic
AGCTGCTCGAAGGACGTTCT+GGG 0.461367 1:+314513 MsG0180000010.01.T01:CDS
CAAAACTGCTCCTCTTGGAC+TGG 0.461628 1:+310988 MsG0180000010.01.T01:CDS
TTCTTTCATCAATCAAAGTC+AGG 0.461942 1:+312649 MsG0180000010.01.T01:CDS
TTTCCTTCAGTTTCGTTCCC+CGG 0.463751 1:-307234 None:intergenic
GAGGGAACTTCTGCTGATCT+AGG 0.464850 1:+308562 MsG0180000010.01.T01:CDS
CTGACTACCGCTGGTGGGCA+AGG 0.465410 1:-312762 None:intergenic
CAAACAAGCTCCTTGTTTGG+CGG 0.466746 1:+309895 MsG0180000010.01.T01:CDS
CAGAGTTTCTAAGGTGTGAC+TGG 0.466854 1:-310331 None:intergenic
ATACAGTGTGTTGAGGGAAT+GGG 0.469267 1:-307464 None:intergenic
GCAGGAGTGTGTGTCTGATT+TGG 0.470969 1:-306104 None:intergenic
GATATGGGGAATATGTTAAC+CGG 0.471960 1:+312971 MsG0180000010.01.T01:CDS
GCAGAATCTGTTGTTAATGC+TGG 0.472329 1:+308784 MsG0180000010.01.T01:CDS
ATGTGAATGTTTACGTTCCT+AGG 0.472527 1:-309973 None:intergenic
CATTTGAAAGGAAACAATGT+TGG 0.473006 1:+306262 MsG0180000010.01.T01:intron
TTGGCTCTAGACCAAACAAT+GGG 0.473293 1:+310099 MsG0180000010.01.T01:CDS
TGTCAGTCAGATTGCCCAGC+AGG 0.474074 1:+312937 MsG0180000010.01.T01:CDS
TCATGTTGTTCAGATTCCTA+TGG 0.474117 1:+307305 MsG0180000010.01.T01:CDS
CCATCTAACCCTTCTGGCAT+CGG 0.474223 1:+310218 MsG0180000010.01.T01:CDS
CCCTTTCACTGCTAGACAGC+TGG 0.474737 1:-314284 None:intergenic
ACTTTAGGCCCCGTTGGTGT+TGG 0.474796 1:+309943 MsG0180000010.01.T01:CDS
TTTCAACCAAATGCAATGTA+TGG 0.475715 1:-306076 None:intergenic
TCCTGCTTTGAATGGTTTGT+TGG 0.475916 1:+312823 MsG0180000010.01.T01:CDS
AACTATGTTAACACTGCGAA+TGG 0.476187 1:+308669 MsG0180000010.01.T01:CDS
TCTCGCCTTTCACTTGAAGA+TGG 0.477787 1:-310950 None:intergenic
CACACTCCTGCTACGGGGTC+CGG 0.479486 1:+306116 MsG0180000010.01.T01:CDS
ACTTTGATTGATGAAAGAAC+TGG 0.480329 1:-312645 None:intergenic
AAAATATATTGCAAACACTC+GGG 0.480549 1:+312690 MsG0180000010.01.T01:CDS
GCCAAATGCAATCAACTAGC+AGG 0.482738 1:+310567 MsG0180000010.01.T01:CDS
TTCATTCCCGTAGGGTGCAC+GGG 0.484925 1:-313314 None:intergenic
GAGCTTGTTTGAAGTGGAAA+TGG 0.485347 1:-309883 None:intergenic
ACCGCGGAGATGAGCGGACG+TGG 0.485367 1:+310644 MsG0180000010.01.T01:CDS
TGTCAACCTGCTGGGCAATC+GGG 0.485522 1:-313141 None:intergenic
GCATTTCTCAAGACATTACT+CGG 0.487020 1:+306371 MsG0180000010.01.T01:CDS
GTTGGTTGCACTTCTGAAAG+TGG 0.487800 1:+310686 MsG0180000010.01.T01:CDS
GGCTGACCATGTTCATCTGT+GGG 0.487914 1:-313120 None:intergenic
AGATTCTAGAGTCTTCGTTC+GGG 0.490096 1:-305326 None:intergenic
ACCTTCAACCAGTGGCTGAT+AGG 0.490194 1:+314205 MsG0180000010.01.T01:CDS
GTTCAGATTCCTATGGCTGC+GGG 0.490634 1:+307312 MsG0180000010.01.T01:CDS
CCAGCAGCTCCGATGCCAGA+AGG 0.490801 1:-310227 None:intergenic
GTGGTTAGTGCTTCAAGTGT+TGG 0.491485 1:-307674 None:intergenic
ATCTCTCTCATCATTACTAC+AGG 0.491809 1:-310828 None:intergenic
CAGGTTGGCAGTCAGGATAT+GGG 0.492293 1:+312956 MsG0180000010.01.T01:CDS
CAGGTTGACAGTCAGGATAT+GGG 0.492293 1:+313154 MsG0180000010.01.T01:CDS
AATATATCTTCAACTAACCT+TGG 0.492822 1:+307611 MsG0180000010.01.T01:CDS
ACAATAAAACAATAAACAAA+AGG 0.493013 1:-314871 None:intergenic
AACTGGAACGGAAACAGGGC+AGG 0.493231 1:+313186 MsG0180000010.01.T01:CDS
CATCAGCACCTTTAGGAGGT+TGG 0.493318 1:-312613 None:intergenic
TTTCATTCCCGTAGGGTGCA+CGG 0.495737 1:-313315 None:intergenic
GCTTTGAATGGTTTGTTGGA+AGG 0.495809 1:+312827 MsG0180000010.01.T01:CDS
TCAGACACACACTCCTGCTA+CGG 0.495909 1:+306109 MsG0180000010.01.T01:CDS
CAGACACACACTCCTGCTAC+GGG 0.497357 1:+306110 MsG0180000010.01.T01:CDS
CCCTCCGAGAGCTTGTATCA+TGG 0.498027 1:-313251 None:intergenic
AACATGCTCCTTAAGCCATC+AGG 0.499359 1:-312878 None:intergenic
AACAAGGAGCTTGTTTGAAG+TGG 0.499575 1:-309889 None:intergenic
CCGGAACGGAAGGAGGGCAG+AGG 0.500044 1:+312990 MsG0180000010.01.T01:CDS
AATGAAAGCACAAGATGTAC+AGG 0.500296 1:-314816 None:intergenic
ATTGTATCACAAGCCCTTGG+TGG 0.501552 1:+313055 MsG0180000010.01.T01:CDS
GGTGCTCCTCGTAGCCGTGT+TGG 0.503290 1:+306289 MsG0180000010.01.T01:CDS
GATGACAATGGAGCTGAATC+GGG 0.503305 1:-310293 None:intergenic
GCGAATCAATCTTCAAATGA+AGG 0.505900 1:+305603 MsG0180000010.01.T01:CDS
ATTATAGGATTTGGCCCTGA+TGG 0.508302 1:-308826 None:intergenic
CGGAACGGAAGGAGGGCAGA+GGG 0.509216 1:+312991 MsG0180000010.01.T01:CDS
CTGGTGATTCAGGTTCGACA+CGG 0.513653 1:+310159 MsG0180000010.01.T01:CDS
TTTGTCTTTGAACAGCGAAA+CGG 0.514925 1:-305849 None:intergenic
GATTTACAAAGTTGTTCTAG+TGG 0.515216 1:+310890 MsG0180000010.01.T01:CDS
GGCTCTGCAGCAGAGAATAG+TGG 0.516233 1:-313286 None:intergenic
ATCTGAACAACATGAGGAAA+CGG 0.516291 1:-307297 None:intergenic
TTGGCGTGTTGTGCCCCAAA+TGG 0.517467 1:+314630 MsG0180000010.01.T01:three_prime_UTR
TGTGGCGGGTTTAATGTCTC+AGG 0.517663 1:+312790 MsG0180000010.01.T01:CDS
TGTTCAGATTCCTATGGCTG+CGG 0.519569 1:+307311 MsG0180000010.01.T01:CDS
ACTGCATTGAAAGAAGGAAC+AGG 0.520422 1:-307342 None:intergenic
TCCACTAAAGATGTTGAGAA+TGG 0.521526 1:+306053 MsG0180000010.01.T01:intron
ATTCCTACTGCATTGAAAGA+AGG 0.523356 1:-307348 None:intergenic
TTTGAATTCATTTGCAAATG+GGG 0.523593 1:+306553 MsG0180000010.01.T01:CDS
GTTCTTGGGACTATTAATGT+GGG 0.523988 1:+306331 MsG0180000010.01.T01:CDS
GCCAAATCCTATAATGGTGC+AGG 0.524609 1:+308834 MsG0180000010.01.T01:CDS
GGTTCTTGGGACTATTAATG+TGG 0.525047 1:+306330 MsG0180000010.01.T01:CDS
CAAAATATATTGCAAACACT+CGG 0.525718 1:+312689 MsG0180000010.01.T01:CDS
GATAGATAGATAGATAGATA+GGG 0.526675 1:+305429 MsG0180000010.01.T01:five_prime_UTR
GGAACGGAAGGAGGGCAGAG+GGG 0.527535 1:+312992 MsG0180000010.01.T01:CDS
TCCAGCTGTCTAGCAGTGAA+AGG 0.528815 1:+314283 MsG0180000010.01.T01:CDS
ATCTTGTTGTTCAGAAACAT+TGG 0.528977 1:-305640 None:intergenic
GGGCTGACCATGTTCATCTG+TGG 0.529144 1:-313121 None:intergenic
TCTGCTGATCTAGGTGTAAG+AGG 0.529800 1:+308571 MsG0180000010.01.T01:CDS
CCTCCGAGAGCTTGTATCAT+GGG 0.530428 1:-313250 None:intergenic
CCAAGGGCTTGTGATACAAT+GGG 0.531514 1:-313052 None:intergenic
CCAGAAACCCGTGCACCCTA+CGG 0.531887 1:+313307 MsG0180000010.01.T01:CDS
TTAACAGTTGTATCCAATGT+TGG 0.534016 1:+314713 MsG0180000010.01.T01:three_prime_UTR
GCTTCCGGTGTATCCTCAGT+TGG 0.536156 1:+310668 MsG0180000010.01.T01:CDS
GAACACATACAGTGTGTTGA+GGG 0.536224 1:-307470 None:intergenic
GATGGAGAAATATAAACTGC+TGG 0.536793 1:-308808 None:intergenic
GGGGTGGTGTTGACCTCTCA+AGG 0.536912 1:+313011 MsG0180000010.01.T01:CDS
TGCAGGACGCATGGAGCGAG+AGG 0.537065 1:+308543 MsG0180000010.01.T01:CDS
TGGTGATTCAGGTTCGACAC+GGG 0.537877 1:+310160 MsG0180000010.01.T01:CDS
CGGTAGTCAGATTGATGTGG+CGG 0.538847 1:+312775 MsG0180000010.01.T01:CDS
AAAACTGCTCCTCTTGGACT+GGG 0.539076 1:+310989 MsG0180000010.01.T01:CDS
TTGTATCACAAGCCCTTGGT+GGG 0.540065 1:+313056 MsG0180000010.01.T01:CDS
TGACAGTGTTCATCATCTGC+GGG 0.540994 1:-312919 None:intergenic
ACCAGACTCCAACCTCCTAA+AGG 0.542230 1:+312605 MsG0180000010.01.T01:CDS
ACCAAGGGCTTGTGATACAA+TGG 0.542806 1:-313053 None:intergenic
CAGAAACCCGTGCACCCTAC+GGG 0.542977 1:+313308 MsG0180000010.01.T01:CDS
AACTCTGTTGGTAATATGCA+AGG 0.543610 1:+310347 MsG0180000010.01.T01:CDS
GAAACTGAAGGAAATCAAGC+TGG 0.543666 1:+307243 MsG0180000010.01.T01:CDS
TAGGAGCATTCATTGTGCCC+TGG 0.544651 1:-306577 None:intergenic
AAGATTGATTCGCCATGGTA+TGG 0.545482 1:-305593 None:intergenic
AAATCAGGCACCATCTGGAC+AGG 0.545938 1:+307266 MsG0180000010.01.T01:CDS
TGCACTAGCTGTCTCACTGC+CGG 0.547750 1:-306135 None:intergenic
ATCCTGACTGCCAACCTGCT+GGG 0.548407 1:-312951 None:intergenic
CTAGCATATTGCAGGACGCA+TGG 0.549101 1:+308534 MsG0180000010.01.T01:intron
TGACTACCGCTGGTGGGCAA+GGG 0.550222 1:-312761 None:intergenic
ACTGAACACCGTAGTGAGCC+CGG 0.552562 1:+310134 MsG0180000010.01.T01:CDS
ATCAATCTGACTACCGCTGG+TGG 0.553084 1:-312768 None:intergenic
GGTGCACTTCTACTTGAACT+GGG 0.554167 1:+308643 MsG0180000010.01.T01:CDS
AGAAAGTGGACCGCCAAACA+AGG 0.554785 1:-309905 None:intergenic
CCAGGTTGACCTTCAACCAG+TGG 0.554927 1:+314197 MsG0180000010.01.T01:intron
TATGAGTGGTTTAGAGCGTA+AGG 0.555258 1:+311012 MsG0180000010.01.T01:CDS
TTCTGAAAGTGGAGTAGAGA+AGG 0.555816 1:+310697 MsG0180000010.01.T01:CDS
ACTATGTTAACACTGCGAAT+GGG 0.555829 1:+308670 MsG0180000010.01.T01:CDS
AGATATCTGTAGGTGGACTC+AGG 0.555870 1:-314236 None:intergenic
ATGATACAAGCTCTCGGAGG+GGG 0.556251 1:+313253 MsG0180000010.01.T01:CDS
CCAGCTGTCTAGCAGTGAAA+GGG 0.556611 1:+314284 MsG0180000010.01.T01:CDS
TCAATCAAAGTCAGGAAACC+AGG 0.557847 1:+312657 MsG0180000010.01.T01:CDS
GAACAACATGAGGAAACGGT+TGG 0.558266 1:-307293 None:intergenic
CCCATTGTATCACAAGCCCT+TGG 0.558380 1:+313052 MsG0180000010.01.T01:CDS
ATTTGAAGATTGATTCGCCA+TGG 0.560305 1:-305598 None:intergenic
GGTTCTGTAGCAGAGAATAG+TGG 0.560598 1:-313091 None:intergenic
CCATGATACAAGCTCTCGGA+GGG 0.562487 1:+313251 MsG0180000010.01.T01:CDS
CGATCAATCCTATCAGCCAC+TGG 0.564835 1:-314213 None:intergenic
GTATCACAAGCCCTTGGTGG+GGG 0.565830 1:+313058 MsG0180000010.01.T01:CDS
GCAGGAGTTGAAGAAGAAAG+TGG 0.566669 1:-309919 None:intergenic
CAGTTTATATTTCTCCATCA+GGG 0.566861 1:+308812 MsG0180000010.01.T01:CDS
CGATGCCAGAAGGGTTAGAT+GGG 0.567423 1:-310217 None:intergenic
ATCCTGACTGTCAACCTGCT+GGG 0.568139 1:-313149 None:intergenic
GGTATGGCTCCCGCAGCCAT+AGG 0.569031 1:-307321 None:intergenic
AGTCAGGAAACCAGGACAGA+TGG 0.569397 1:+312665 MsG0180000010.01.T01:CDS
TTCTTGGGACTATTAATGTG+GGG 0.569682 1:+306332 MsG0180000010.01.T01:CDS
AAATATATTGCAAACACTCG+GGG 0.570038 1:+312691 MsG0180000010.01.T01:CDS
GGATACGATAGTGAGAAAGA+AGG 0.570907 1:-305946 None:intergenic
ATGTTAACCGGAACGGAAGG+AGG 0.571880 1:+312983 MsG0180000010.01.T01:CDS
TACAGTGTGTTGAGGGAATG+GGG 0.572664 1:-307463 None:intergenic
CACATCAATCTGACTACCGC+TGG 0.573025 1:-312771 None:intergenic
CCTCTTGGACTGGGTATGAG+TGG 0.573762 1:+310998 MsG0180000010.01.T01:CDS
TCTTGGGACTATTAATGTGG+GGG 0.574459 1:+306333 MsG0180000010.01.T01:CDS
GCTCGAAGGACGTTCTGGGA+GGG 0.576177 1:+314517 MsG0180000010.01.T01:CDS
TCCAACAAACCATTCAAAGC+AGG 0.577193 1:-312824 None:intergenic
GTGGTGGTCTCGACTTCTCA+AGG 0.577739 1:+313209 MsG0180000010.01.T01:CDS
CTGACAGTGTTCATCATCTG+CGG 0.578106 1:-312920 None:intergenic
CCGTCATCAGCACCTTTAGG+AGG 0.578916 1:-312617 None:intergenic
GTATGTGTTCATAAATCGCA+TGG 0.580144 1:+307483 MsG0180000010.01.T01:CDS
TTGGTGTTGGAAGTGCTCCT+AGG 0.580894 1:+309956 MsG0180000010.01.T01:CDS
CACCAGAACCGGGCTCACTA+CGG 0.581466 1:-310142 None:intergenic
ATGCTCCATCTTCAAGTGAA+AGG 0.582046 1:+310945 MsG0180000010.01.T01:CDS
GCAGCAGAGAATAGTGGTGG+AGG 0.584726 1:-313280 None:intergenic
CCTGCAACTTTAGGCCCCGT+TGG 0.585045 1:+309937 MsG0180000010.01.T01:CDS
TGAACACATACAGTGTGTTG+AGG 0.586131 1:-307471 None:intergenic
ACGGGAGTTGACTCACCTGA+TGG 0.587577 1:+312863 MsG0180000010.01.T01:CDS
CGCGGAGATGAGCGGACGTG+GGG 0.588211 1:+310646 MsG0180000010.01.T01:CDS
TTGAATTCATTTGCAAATGG+GGG 0.588746 1:+306554 MsG0180000010.01.T01:CDS
AGAAGAAGATCTGCGTGCGT+TGG 0.589420 1:-305358 None:intergenic
TGAAACAATTGGTGCAAGAG+AGG 0.589969 1:-310072 None:intergenic
CCTTCAGTTTCGTTCCCCGG+TGG 0.591488 1:-307231 None:intergenic
CAGCGACCCTTGCCCACCAG+CGG 0.592187 1:+312755 MsG0180000010.01.T01:CDS
TAATCACCTCAATCCAACAT+TGG 0.592469 1:-314726 None:intergenic
TGTATCACAAGCCCTTGGTG+GGG 0.593198 1:+313057 MsG0180000010.01.T01:CDS
CAAACAATGGGGAAGGGACA+AGG 0.594079 1:+310111 MsG0180000010.01.T01:CDS
AATATGTTAACCGGAACGGA+AGG 0.594563 1:+312980 MsG0180000010.01.T01:CDS
CAGCAGCTCCGATGCCAGAA+GGG 0.595475 1:-310226 None:intergenic
GGTAGTCAGATTGATGTGGC+GGG 0.595486 1:+312776 MsG0180000010.01.T01:CDS
GGGGAATATGCTAACTGGAA+CGG 0.596357 1:+313174 MsG0180000010.01.T01:CDS
GTAGCAGAGAATAGTGGTGG+AGG 0.597993 1:-313085 None:intergenic
GTAAACATTCACATACATGC+TGG 0.598953 1:+309982 MsG0180000010.01.T01:CDS
CCAAATGCAATCAACTAGCA+GGG 0.599347 1:+310568 MsG0180000010.01.T01:CDS
CCTCCTAAAGGTGCTGATGA+CGG 0.599760 1:+312617 MsG0180000010.01.T01:CDS
GGGGAATATGTTAACCGGAA+CGG 0.601844 1:+312976 MsG0180000010.01.T01:CDS
GGTGATTCAGGTTCGACACG+GGG 0.602931 1:+310161 MsG0180000010.01.T01:CDS
TCTAGACCAAACAATGGGGA+AGG 0.604140 1:+310104 MsG0180000010.01.T01:CDS
TTGTATCCAATGTTGGATTG+AGG 0.607013 1:+314720 MsG0180000010.01.T01:three_prime_UTR
ATTGAAAGAAGGAACAGGTA+TGG 0.608235 1:-307337 None:intergenic
TTGATTGATGAAAGAACTGG+AGG 0.610446 1:-312642 None:intergenic
CATTTCTCAAGACATTACTC+GGG 0.611396 1:+306372 MsG0180000010.01.T01:CDS
AGGAGCACTTCCAACACCAA+CGG 0.613156 1:-309953 None:intergenic
AAAGTGCTACAAATGAGTGT+TGG 0.613545 1:+314611 MsG0180000010.01.T01:three_prime_UTR
ATGCCCATGATACAAGCTCT+CGG 0.617587 1:+313247 MsG0180000010.01.T01:CDS
AGTCAGATTGCCCAGCAGGT+TGG 0.619153 1:+312941 MsG0180000010.01.T01:CDS
AGGTTGGCAGTCAGGATATG+GGG 0.622013 1:+312957 MsG0180000010.01.T01:CDS
AGGTTGACAGTCAGGATATG+GGG 0.622013 1:+313155 MsG0180000010.01.T01:CDS
CCAAACTAATAAACCATTTG+GGG 0.622052 1:-314643 None:intergenic
ATCGGGTGGTAGCTGTGAAG+TGG 0.627292 1:-310276 None:intergenic
TCTGTTGAAGCATCCTTGAG+AGG 0.630215 1:-313024 None:intergenic
TGCTAACTGGAACGGAAACA+GGG 0.630324 1:+313182 MsG0180000010.01.T01:CDS
ATAGGAATCTGAACAACATG+AGG 0.630849 1:-307303 None:intergenic
CCACTCATACCCAGTCCAAG+AGG 0.633234 1:-310998 None:intergenic
TGTTAACCGGAACGGAAGGA+GGG 0.633672 1:+312984 MsG0180000010.01.T01:CDS
TTCAGAAGTGCAACCAACTG+AGG 0.633745 1:-310681 None:intergenic
GGTTGGAATGCCTGTCCAGA+TGG 0.633876 1:-307276 None:intergenic
TGGGCAAATTTCACACAGTG+TGG 0.634556 1:+306309 MsG0180000010.01.T01:CDS
GAACCTGAATCACCAGAACC+GGG 0.636088 1:-310152 None:intergenic
ATTCTGCTCGTTGATCTCCA+AGG 0.637073 1:-307628 None:intergenic
CCGCGGAGATGAGCGGACGT+GGG 0.638934 1:+310645 MsG0180000010.01.T01:CDS
CCACCGGGGAACGAAACTGA+AGG 0.639658 1:+307231 MsG0180000010.01.T01:CDS
TGCTCGAAGGACGTTCTGGG+AGG 0.640302 1:+314516 MsG0180000010.01.T01:CDS
GAATTGCCTTCTAATACACA+AGG 0.641086 1:+307647 MsG0180000010.01.T01:CDS
CTGGTGGGCAAGGGTCGCTG+AGG 0.641101 1:-312752 None:intergenic
CTGAACAACACACCATACCA+TGG 0.641787 1:+305581 MsG0180000010.01.T01:exon
ACAGCACGGAAGATATCTGT+AGG 0.645362 1:-314246 None:intergenic
TCAGCTAAAACAGATGACAA+TGG 0.645638 1:-310305 None:intergenic
TGTGTGAAATTTGCCCAACA+CGG 0.647094 1:-306303 None:intergenic
TCAATCTGACTACCGCTGGT+GGG 0.647138 1:-312767 None:intergenic
GATGTAAGTAAGCTGCTCGA+AGG 0.650206 1:+314503 MsG0180000010.01.T01:CDS
AGAGATACCGCGGAGATGAG+CGG 0.652439 1:+310638 MsG0180000010.01.T01:CDS
ATTGGCTCTAGACCAAACAA+TGG 0.655176 1:+310098 MsG0180000010.01.T01:CDS
TCTGTAGCAGAGAATAGTGG+TGG 0.656147 1:-313088 None:intergenic
CAGCGGTAGTCAGATTGATG+TGG 0.657434 1:+312772 MsG0180000010.01.T01:CDS
GGAACGGAAACAGGGCAGGG+TGG 0.658322 1:+313190 MsG0180000010.01.T01:CDS
AGAAAGCCCACAGATGAACA+TGG 0.659366 1:+313114 MsG0180000010.01.T01:CDS
CATGATACAAGCTCTCGGAG+GGG 0.659991 1:+313252 MsG0180000010.01.T01:CDS
ACTGGAACGGAAACAGGGCA+GGG 0.660931 1:+313187 MsG0180000010.01.T01:CDS
GCAGGACGCATGGAGCGAGA+GGG 0.662033 1:+308544 MsG0180000010.01.T01:CDS
CTAGACCAAACAATGGGGAA+GGG 0.662121 1:+310105 MsG0180000010.01.T01:CDS
TCACACCTTAGAAACTCTGT+TGG 0.665440 1:+310335 MsG0180000010.01.T01:CDS
CCCATGATACAAGCTCTCGG+AGG 0.668225 1:+313250 MsG0180000010.01.T01:CDS
ACATCAAAGTATGACAGTGG+AGG 0.668378 1:-314753 None:intergenic
ATTACATCAAAGTATGACAG+TGG 0.668706 1:-314756 None:intergenic
CCCACGTCCGCTCATCTCCG+CGG 0.669954 1:-310645 None:intergenic
GACAATGGAGCTGAATCGGG+TGG 0.672692 1:-310290 None:intergenic
GCAACCAACTGAGGATACAC+CGG 0.678404 1:-310672 None:intergenic
ACTGACCGAAGAAGTTTGTG+CGG 0.679232 1:-306603 None:intergenic
GCTAGTGCAAATAGTAACCG+AGG 0.687450 1:+306149 MsG0180000010.01.T01:CDS
AATATGGTTTCAGGTTATCG+GGG 0.691367 1:+306526 MsG0180000010.01.T01:intron
TCTGCAGCAGAGAATAGTGG+TGG 0.699613 1:-313283 None:intergenic
GCACGGAAGATATCTGTAGG+TGG 0.700840 1:-314243 None:intergenic
TCACAACCAGACCCAAACTG+AGG 0.703188 1:+310796 MsG0180000010.01.T01:intron
AATATATTGCAAACACTCGG+GGG 0.705829 1:+312692 MsG0180000010.01.T01:CDS
ATTTGCCCAACACGGCTACG+AGG 0.706337 1:-306295 None:intergenic
TTCTGTACGATGCAATACAG+TGG 0.709351 1:-307693 None:intergenic
TAATTGTGACTAGCTGACAG+TGG 0.709682 1:+314775 MsG0180000010.01.T01:three_prime_UTR
GTGGAGATACTGAATCCAGA+TGG 0.710982 1:-310257 None:intergenic
AAATGAACAGAGAGATACCG+CGG 0.715935 1:+310628 MsG0180000010.01.T01:CDS
AATTGCCTTCTAATACACAA+GGG 0.735513 1:+307648 MsG0180000010.01.T01:CDS
TGGCTCTAGACCAAACAATG+GGG 0.735668 1:+310100 MsG0180000010.01.T01:CDS
AGACACACACTCCTGCTACG+GGG 0.754610 1:+306111 MsG0180000010.01.T01:CDS
GAGCACTTCCAACACCAACG+GGG 0.778341 1:-309951 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATGTATGTATATAAA+TGG - Chr1:307769-307788 None:intergenic 10.0%
!! AAAAATGTATGTATATAAAT+GGG - Chr1:307768-307787 None:intergenic 10.0%
!! AGATAAATATAATCATTTAT+AGG - Chr1:306957-306976 None:intergenic 10.0%
!! TATAATGAAACAATATATAT+AGG - Chr1:310488-310507 None:intergenic 10.0%
!! TATTCAAATTCAAAATTTAA+AGG - Chr1:307410-307429 None:intergenic 10.0%
!!! ATTGTTTTAATAATATGTAT+GGG + Chr1:310404-310423 MsG0180000010.01.T01:intron 10.0%
!! AACAAATTAAAGATTTACAA+TGG - Chr1:307922-307941 None:intergenic 15.0%
!! CATTATTTATTGATGTAATA+TGG + Chr1:306510-306529 MsG0180000010.01.T01:intron 15.0%
!! GATTGTATTGTATTATATAT+GGG - Chr1:305532-305551 None:intergenic 15.0%
!! TGATTGTATTGTATTATATA+TGG - Chr1:305533-305552 None:intergenic 15.0%
!! TTATGTTAAGCTTAATATTT+GGG + Chr1:312010-312029 MsG0180000010.01.T01:intron 15.0%
!!! AAATTATTCATTTTACCAAA+AGG - Chr1:307022-307041 None:intergenic 15.0%
!!! AATTATTCATTTTACCAAAA+GGG - Chr1:307021-307040 None:intergenic 15.0%
!!! ATATTTGTTGTAATTATGAT+TGG + Chr1:311292-311311 MsG0180000010.01.T01:intron 15.0%
!!! ATGTTTTCATTATTTTCATT+TGG + Chr1:308705-308724 MsG0180000010.01.T01:intron 15.0%
!!! ATTGATTGATTTTTTTTACA+TGG + Chr1:312276-312295 MsG0180000010.01.T01:intron 15.0%
!!! CATGTTATGTTTATTTATTT+TGG + Chr1:313410-313429 MsG0180000010.01.T01:intron 15.0%
!!! CATTCAAATATTTTTGTATA+AGG + Chr1:309340-309359 MsG0180000010.01.T01:intron 15.0%
!!! CATTGTTTTAATAATATGTA+TGG + Chr1:310403-310422 MsG0180000010.01.T01:intron 15.0%
!!! GTTGATAATTTATTTACTTT+TGG + Chr1:306983-307002 MsG0180000010.01.T01:intron 15.0%
!!! TAATTTTAACATTCTTTTGA+AGG + Chr1:311958-311977 MsG0180000010.01.T01:intron 15.0%
!!! TAGATGATTCAAAAATATTT+TGG + Chr1:314079-314098 MsG0180000010.01.T01:intron 15.0%
!!! TATTTGTTGTAATTATGATT+GGG + Chr1:311293-311312 MsG0180000010.01.T01:intron 15.0%
!!! TGTTTTCATTATTTTCATTT+GGG + Chr1:308706-308725 MsG0180000010.01.T01:intron 15.0%
!!! TTGATTGATTTTTTTTACAT+GGG + Chr1:312277-312296 MsG0180000010.01.T01:intron 15.0%
!!! TTTATTTTGGTTACTTATTT+TGG + Chr1:313423-313442 MsG0180000010.01.T01:intron 15.0%
!! AAATAAAAACTATGCTTGTA+GGG - Chr1:310758-310777 None:intergenic 20.0%
!! AAATATATCGTTTCATTCAT+AGG + Chr1:313517-313536 MsG0180000010.01.T01:intron 20.0%
!! AAGTAAAATAATTAGAAGAG+TGG - Chr1:305483-305502 None:intergenic 20.0%
!! AAGTTTATGTTTGTATACTT+TGG + Chr1:314359-314378 MsG0180000010.01.T01:intron 20.0%
!! AATATATCGTTTCATTCATA+GGG + Chr1:313518-313537 MsG0180000010.01.T01:intron 20.0%
!! AGTGAAAAAAAGAATTGATT+TGG + Chr1:312330-312349 MsG0180000010.01.T01:intron 20.0%
!! ATTCATATGCACATAAAATT+AGG - Chr1:314549-314568 None:intergenic 20.0%
!! ATTTGATATTTATCACTAGT+AGG - Chr1:306932-306951 None:intergenic 20.0%
!! GAACATGTAATGTAATATAA+AGG + Chr1:312299-312318 MsG0180000010.01.T01:intron 20.0%
!! GACATTATAAATAGTTAAGT+TGG + Chr1:308965-308984 MsG0180000010.01.T01:intron 20.0%
!! GTTATGTTAAGCTTAATATT+TGG + Chr1:312009-312028 MsG0180000010.01.T01:intron 20.0%
!! GTTGGAAATATATAGAAAAA+TGG + Chr1:313627-313646 MsG0180000010.01.T01:intron 20.0%
!! TATGTTAAGCTTAATATTTG+GGG + Chr1:312011-312030 MsG0180000010.01.T01:intron 20.0%
!! TCAAAGAAGATAAAATTGAA+AGG - Chr1:306818-306837 None:intergenic 20.0%
!! TTAAAGGAGTAAAAATTAAG+AGG - Chr1:307394-307413 None:intergenic 20.0%
!! TTATGATAGATATGCAAAAT+AGG + Chr1:311603-311622 MsG0180000010.01.T01:intron 20.0%
!!! AATATCATATTTTCCTGTTT+CGG + Chr1:309470-309489 MsG0180000010.01.T01:intron 20.0%
!!! ACTTTTTGTAGAATAGAATA+GGG + Chr1:305499-305518 MsG0180000010.01.T01:intron 20.0%
!!! ATATTTATGTTTTCTTTTGC+AGG + Chr1:307578-307597 MsG0180000010.01.T01:intron 20.0%
!!! ATTATTCATTTTACCAAAAG+GGG - Chr1:307020-307039 None:intergenic 20.0%
!!! ATTTAATTTCTTTCTTGTAC+AGG + Chr1:314457-314476 MsG0180000010.01.T01:intron 20.0%
!!! CATCAATAAATAATGTTTTC+AGG - Chr1:306505-306524 None:intergenic 20.0%
!!! CTTTTTCAAAATTAAACTAC+TGG - Chr1:307098-307117 None:intergenic 20.0%
!!! GCTAAATTTTATCATTTGAA+AGG + Chr1:306250-306269 MsG0180000010.01.T01:intron 20.0%
!!! GTTTAACTTTTAAGTACTTT+CGG + Chr1:311345-311364 MsG0180000010.01.T01:intron 20.0%
!!! TACTTTTTGTAGAATAGAAT+AGG + Chr1:305498-305517 MsG0180000010.01.T01:intron 20.0%
!!! TTAATTTGATAAATGCTGAT+AGG + Chr1:312729-312748 MsG0180000010.01.T01:CDS 20.0%
!!! TTATGATTTTTATGATGACA+CGG + Chr1:307052-307071 MsG0180000010.01.T01:intron 20.0%
!!! TTTTGAATTCATTTGCAAAT+GGG + Chr1:306552-306571 MsG0180000010.01.T01:CDS 20.0%
! AAAAATTAAGAGACGTAGAA+GGG - Chr1:314050-314069 None:intergenic 25.0%
! AAAATATATTGCAAACACTC+GGG + Chr1:312690-312709 MsG0180000010.01.T01:CDS 25.0%
! AACCATTTAGAGAGATTTAT+AGG + Chr1:311735-311754 MsG0180000010.01.T01:intron 25.0%
! AACCTAGTAAATTACACAAA+TGG - Chr1:306662-306681 None:intergenic 25.0%
! AATAAAAACTATGCTTGTAG+GGG - Chr1:310757-310776 None:intergenic 25.0%
! AATATATCTTCAACTAACCT+TGG + Chr1:307611-307630 MsG0180000010.01.T01:CDS 25.0%
! AATATCAGTTGATTAATCGA+GGG + Chr1:308190-308209 MsG0180000010.01.T01:intron 25.0%
! ACAACTTTGTAAATCTTGAT+TGG - Chr1:310885-310904 None:intergenic 25.0%
! ACAATTGTTAGAGAGAAAAT+TGG + Chr1:311634-311653 MsG0180000010.01.T01:intron 25.0%
! ACAGAATCAGATAAACATAA+AGG - Chr1:308494-308513 None:intergenic 25.0%
! AGATAGATAGATAGATAGAT+AGG + Chr1:305428-305447 MsG0180000010.01.T01:five_prime_UTR 25.0%
! ATCCAAACTAATAAACCATT+TGG - Chr1:314648-314667 None:intergenic 25.0%
! ATGAAATAGTTGAATGATTG+GGG + Chr1:311434-311453 MsG0180000010.01.T01:intron 25.0%
! ATTGATAAAGGATTGAAGAT+TGG + Chr1:308995-309014 MsG0180000010.01.T01:intron 25.0%
! CAAAATATATTGCAAACACT+CGG + Chr1:312689-312708 MsG0180000010.01.T01:CDS 25.0%
! CAAATAAAAACTATGCTTGT+AGG - Chr1:310759-310778 None:intergenic 25.0%
! CAATTGTTAGAGAGAAAATT+GGG + Chr1:311635-311654 MsG0180000010.01.T01:intron 25.0%
! GATAGATAGATAGATAGATA+GGG + Chr1:305425-305444 MsG0180000010.01.T01:five_prime_UTR 25.0%
! GATATTATGAGTAAAATTGC+AGG - Chr1:308176-308195 None:intergenic 25.0%
! GATGAAATAGTTGAATGATT+GGG + Chr1:311433-311452 MsG0180000010.01.T01:intron 25.0%
! GCTGATGTAGAAATAATAAA+AGG - Chr1:305970-305989 None:intergenic 25.0%
! GTGTCATCATAAAAATCATA+AGG - Chr1:307053-307072 None:intergenic 25.0%
! GTTGGTTAGATTATTGATAA+AGG + Chr1:308983-309002 MsG0180000010.01.T01:intron 25.0%
! GTTGTATGAAACTAAATGTT+GGG + Chr1:311532-311551 MsG0180000010.01.T01:intron 25.0%
! TAAAATGTCTTCATAACGAT+TGG + Chr1:307991-308010 MsG0180000010.01.T01:intron 25.0%
! TAATATCAGTTGATTAATCG+AGG + Chr1:308189-308208 MsG0180000010.01.T01:intron 25.0%
! TATGCATGTACTTACAAAAA+AGG + Chr1:313366-313385 MsG0180000010.01.T01:intron 25.0%
! TATTGATGTAATATGGTTTC+AGG + Chr1:306517-306536 MsG0180000010.01.T01:intron 25.0%
! TCCAAACTAATAAACCATTT+GGG - Chr1:314647-314666 None:intergenic 25.0%
! TCCTAAATATGTCCAAATTT+CGG + Chr1:307868-307887 MsG0180000010.01.T01:intron 25.0%
! TGTTGTAGTATAAACTTTAC+TGG + Chr1:307816-307835 MsG0180000010.01.T01:intron 25.0%
! TGTTGTATGAAACTAAATGT+TGG + Chr1:311531-311550 MsG0180000010.01.T01:intron 25.0%
! TTAGTTTCATACAACATTGT+TGG - Chr1:311527-311546 None:intergenic 25.0%
! TTATGAAATCAATTGATGCA+TGG + Chr1:311796-311815 MsG0180000010.01.T01:intron 25.0%
! TTGAACACTGAATTATTACT+AGG + Chr1:311323-311342 MsG0180000010.01.T01:intron 25.0%
! TTTGAATTCATTTGCAAATG+GGG + Chr1:306553-306572 MsG0180000010.01.T01:CDS 25.0%
!! AAAATTTTGTATATCTCACC+AGG - Chr1:310031-310050 None:intergenic 25.0%
!! AGGTTAGTTGAAGATATATT+TGG - Chr1:307611-307630 None:intergenic 25.0%
!! ATCTTCTATCTAGAATTGAA+AGG + Chr1:307547-307566 MsG0180000010.01.T01:intron 25.0%
!! CATGATCATATTCAATTTTC+AGG + Chr1:308762-308781 MsG0180000010.01.T01:intron 25.0%
!! TCTTCTATCTAGAATTGAAA+GGG + Chr1:307548-307567 MsG0180000010.01.T01:intron 25.0%
!! TGTAAAATCAGAAAAAGTAC+AGG + Chr1:310922-310941 MsG0180000010.01.T01:CDS 25.0%
!! TTATTCATTTTACCAAAAGG+GGG - Chr1:307019-307038 None:intergenic 25.0%
!! TTTCTAAACTTTTTACTCCA+GGG + Chr1:312233-312252 MsG0180000010.01.T01:intron 25.0%
!! TTTTCTAAACTTTTTACTCC+AGG + Chr1:312232-312251 MsG0180000010.01.T01:intron 25.0%
!!! AAGGGATGATTTATTTTCAT+AGG - Chr1:312099-312118 None:intergenic 25.0%
!!! AGAAATTTTAACCAACAAGA+GGG - Chr1:308291-308310 None:intergenic 25.0%
!!! CAACTATTTTTCTTGCATAT+TGG - Chr1:309204-309223 None:intergenic 25.0%
!!! CATGCTATTTTCTTTCTATT+AGG + Chr1:305551-305570 MsG0180000010.01.T01:intron 25.0%
!!! CATTATTTTCATTTGGGATT+TGG + Chr1:308712-308731 MsG0180000010.01.T01:intron 25.0%
!!! GAAAAAAAGAATTGATTTGG+AGG + Chr1:312333-312352 MsG0180000010.01.T01:intron 25.0%
!!! GTATTACTTTTGTTCATACA+TGG + Chr1:310719-310738 MsG0180000010.01.T01:intron 25.0%
!!! GTTTGTTTGTTTTTGTTATG+CGG + Chr1:305777-305796 MsG0180000010.01.T01:intron 25.0%
!!! GTTTTGAATTCATTTGCAAA+TGG + Chr1:306551-306570 MsG0180000010.01.T01:CDS 25.0%
!!! TAGAAATTTTAACCAACAAG+AGG - Chr1:308292-308311 None:intergenic 25.0%
!!! TGAAGTGCATTTTAATTGTA+TGG + Chr1:308434-308453 MsG0180000010.01.T01:intron 25.0%
!!! TTTTAGAGGAAAAGTCTTAA+AGG + Chr1:305916-305935 MsG0180000010.01.T01:CDS 25.0%
AAAACTAATTGTACTTCTCC+TGG + Chr1:310010-310029 MsG0180000010.01.T01:intron 30.0%
AAAGATCACATAGGATATGA+AGG + Chr1:308248-308267 MsG0180000010.01.T01:intron 30.0%
AAATATATTGCAAACACTCG+GGG + Chr1:312691-312710 MsG0180000010.01.T01:CDS 30.0%
AAATGGTGAATTATCGTCTT+AGG + Chr1:311677-311696 MsG0180000010.01.T01:intron 30.0%
AAATTACCAATCATGCTAAC+TGG - Chr1:311944-311963 None:intergenic 30.0%
AACTACTGGTAGAGAATAAA+AGG - Chr1:307084-307103 None:intergenic 30.0%
AACTTCCATAGTAGAGAAAA+TGG + Chr1:311660-311679 MsG0180000010.01.T01:intron 30.0%
AAGAAATAGAAGACATTGAG+AGG - Chr1:313883-313902 None:intergenic 30.0%
AATAAAAAATCCCCCTCATT+TGG - Chr1:313829-313848 None:intergenic 30.0%
AATCAATAAATGTCTCCCAT+TGG - Chr1:312263-312282 None:intergenic 30.0%
AATTGCCTTCTAATACACAA+GGG + Chr1:307648-307667 MsG0180000010.01.T01:CDS 30.0%
ACAAAATATGAAGGGATGAA+TGG - Chr1:311257-311276 None:intergenic 30.0%
ACAAATATGATGTATCCTTG+AGG - Chr1:311280-311299 None:intergenic 30.0%
ACTTTGATTGATGAAAGAAC+TGG - Chr1:312648-312667 None:intergenic 30.0%
AGTAGATTTCCATACATATG+AGG - Chr1:308114-308133 None:intergenic 30.0%
ATAAAAAATCCCCCTCATTT+GGG - Chr1:313828-313847 None:intergenic 30.0%
ATACAAACATAAACTTACGC+CGG - Chr1:314355-314374 None:intergenic 30.0%
ATGTTTACTTACAACTAGTG+AGG - Chr1:314129-314148 None:intergenic 30.0%
ATTACATCAAAGTATGACAG+TGG - Chr1:314759-314778 None:intergenic 30.0%
ATTTAGTTGTGTCCGAAATT+TGG - Chr1:307883-307902 None:intergenic 30.0%
CACCTATAAATCTCTCTAAA+TGG - Chr1:311740-311759 None:intergenic 30.0%
CAGTTTATATTTCTCCATCA+GGG + Chr1:308812-308831 MsG0180000010.01.T01:CDS 30.0%
CATACATATGAGGAGTTTAA+TGG - Chr1:308104-308123 None:intergenic 30.0%
CATTAAACTCCTCATATGTA+TGG + Chr1:308102-308121 MsG0180000010.01.T01:intron 30.0%
CATTTGAAAGGAAACAATGT+TGG + Chr1:306262-306281 MsG0180000010.01.T01:intron 30.0%
CCAAACTAATAAACCATTTG+GGG - Chr1:314646-314665 None:intergenic 30.0%
CTTTCTTGTACAGGAATATT+TGG + Chr1:314466-314485 MsG0180000010.01.T01:intron 30.0%
GAAAAATTAAGAGACGTAGA+AGG - Chr1:314051-314070 None:intergenic 30.0%
GAACTCAAAAATTGTATTGG+GGG - Chr1:313804-313823 None:intergenic 30.0%
GAGATAAAAAAGCAAAGAGA+AGG - Chr1:308082-308101 None:intergenic 30.0%
GATAACATGTGATCTCTATT+AGG + Chr1:309246-309265 MsG0180000010.01.T01:intron 30.0%
GATTTACAAAGTTGTTCTAG+TGG + Chr1:310890-310909 MsG0180000010.01.T01:CDS 30.0%
GGAACTCAAAAATTGTATTG+GGG - Chr1:313805-313824 None:intergenic 30.0%
GGATGAAATAGTTGAATGAT+TGG + Chr1:311432-311451 MsG0180000010.01.T01:intron 30.0%
GGGAACTCAAAAATTGTATT+GGG - Chr1:313806-313825 None:intergenic 30.0%
GTATAAACTTTACTGGAAAC+TGG + Chr1:307823-307842 MsG0180000010.01.T01:intron 30.0%
GTATAAGTTGTAGATACTGT+AGG - Chr1:306423-306442 None:intergenic 30.0%
GTATGTATATAAATGGGATG+TGG - Chr1:307762-307781 None:intergenic 30.0%
GTCTATCATACGATTCAAAT+GGG + Chr1:311407-311426 MsG0180000010.01.T01:intron 30.0%
TAACCAATCTAATATGACGA+TGG + Chr1:309556-309575 MsG0180000010.01.T01:intron 30.0%
TAAGGCTAATTTACTCTGTA+TGG + Chr1:309358-309377 MsG0180000010.01.T01:intron 30.0%
TAGAGAGATTTATAGGTGAA+TGG + Chr1:311742-311761 MsG0180000010.01.T01:intron 30.0%
TATCCTATGTGATCTTTAAC+TGG - Chr1:308245-308264 None:intergenic 30.0%
TATTACCAACAGAGTTTCTA+AGG - Chr1:310343-310362 None:intergenic 30.0%
TCCGAAATTTGGACATATTT+AGG - Chr1:307872-307891 None:intergenic 30.0%
TCTATCATACGATTCAAATG+GGG + Chr1:311408-311427 MsG0180000010.01.T01:intron 30.0%
TGTCTATCATACGATTCAAA+TGG + Chr1:311406-311425 MsG0180000010.01.T01:intron 30.0%
TTAACAGTTGTATCCAATGT+TGG + Chr1:314713-314732 MsG0180000010.01.T01:three_prime_UTR 30.0%
TTCTTTCATCAATCAAAGTC+AGG + Chr1:312649-312668 MsG0180000010.01.T01:CDS 30.0%
TTGAATTCATTTGCAAATGG+GGG + Chr1:306554-306573 MsG0180000010.01.T01:CDS 30.0%
TTGTTGTACAATCTAGATCA+TGG + Chr1:309658-309677 MsG0180000010.01.T01:intron 30.0%
TTTCAACCAAATGCAATGTA+TGG - Chr1:306079-306098 None:intergenic 30.0%
! ATAGGTGAATGGTTTGTATT+TGG + Chr1:311753-311772 MsG0180000010.01.T01:intron 30.0%
! ATGTTTTCTTTTGCAGGTTA+TGG + Chr1:307584-307603 MsG0180000010.01.T01:intron 30.0%
! ATTCACCATTTTCTCTACTA+TGG - Chr1:311668-311687 None:intergenic 30.0%
! CATGGTGTTTGAAAATTTTC+TGG + Chr1:311132-311151 MsG0180000010.01.T01:intron 30.0%
! CTAAATTTTTGCGCATGAAT+TGG - Chr1:314679-314698 None:intergenic 30.0%
! GACATATTTAGGATTATCCT+AGG - Chr1:307861-307880 None:intergenic 30.0%
! GTTTGACATATACTTTTCCT+TGG - Chr1:311718-311737 None:intergenic 30.0%
! TAATGATGAGAGAGATGTTT+TGG + Chr1:310835-310854 MsG0180000010.01.T01:CDS 30.0%
! TGCCATTTGTGTAATTTACT+AGG + Chr1:306657-306676 MsG0180000010.01.T01:intron 30.0%
! TGTTTTCTTTTGCAGGTTAT+GGG + Chr1:307585-307604 MsG0180000010.01.T01:intron 30.0%
!! ATCTTGTTGTTCAGAAACAT+TGG - Chr1:305643-305662 None:intergenic 30.0%
!! ATTAACATCATCGTCGTTTT+TGG + Chr1:305301-305320 MsG0180000010.01.T01:five_prime_UTR 30.0%
!! GCAAGGTATTGAAATGAAAA+TGG - Chr1:309039-309058 None:intergenic 30.0%
!! GTAATATGGTTTCAGGTTAT+CGG + Chr1:306524-306543 MsG0180000010.01.T01:intron 30.0%
!! TAATATGGTTTCAGGTTATC+GGG + Chr1:306525-306544 MsG0180000010.01.T01:intron 30.0%
!! TCTACTACTTTTAGCAATGT+TGG + Chr1:308128-308147 MsG0180000010.01.T01:intron 30.0%
!!! TTTTAATTTTGTATCCTGCC+AGG + Chr1:310047-310066 MsG0180000010.01.T01:intron 30.0%
AAAATACCTCGCAAGGTTAA+AGG + Chr1:311476-311495 MsG0180000010.01.T01:intron 35.0%
AAACAGCTGAATGGCATATA+AGG - Chr1:311885-311904 None:intergenic 35.0%
AAACATTTGTCCTCTTGAGT+CGG + Chr1:307132-307151 MsG0180000010.01.T01:intron 35.0%
AAACTGCACCTAGTGTAAAA+GGG + Chr1:311822-311841 MsG0180000010.01.T01:intron 35.0%
AAACTGTTCTGCATCCAATT+AGG + Chr1:310545-310564 MsG0180000010.01.T01:intron 35.0%
AAAGGAAACAATGTTGGATC+AGG + Chr1:306268-306287 MsG0180000010.01.T01:intron 35.0%
AAATAGTTGAATGATTGGGG+TGG + Chr1:311437-311456 MsG0180000010.01.T01:intron 35.0%
AAATGCCTTAGGTTATACCT+CGG - Chr1:306169-306188 None:intergenic 35.0%
AAATTGAAAGGACGAGTAGA+AGG - Chr1:306806-306825 None:intergenic 35.0%
AACAGCTGAATGGCATATAA+GGG - Chr1:311884-311903 None:intergenic 35.0%
AACAGTTAAGAGTCAAGTTC+AGG - Chr1:309121-309140 None:intergenic 35.0%
AACATAAATACGAGACTTCC+AGG - Chr1:311910-311929 None:intergenic 35.0%
AACTATGTTAACACTGCGAA+TGG + Chr1:308669-308688 MsG0180000010.01.T01:CDS 35.0%
AATAGTTGAATGATTGGGGT+GGG + Chr1:311438-311457 MsG0180000010.01.T01:intron 35.0%
AATATATTGCAAACACTCGG+GGG + Chr1:312692-312711 MsG0180000010.01.T01:CDS 35.0%
AATCTAGATCATGGTTCTCT+GGG + Chr1:309667-309686 MsG0180000010.01.T01:intron 35.0%
ACAACAGAATGTGATGCATA+TGG - Chr1:308221-308240 None:intergenic 35.0%
ACAATTACCATGCACTTTCA+AGG - Chr1:306773-306792 None:intergenic 35.0%
ACGCAGACTAAAATCATAGA+TGG - Chr1:306741-306760 None:intergenic 35.0%
ACGTGTTATACTGCATACTT+GGG + Chr1:309142-309161 MsG0180000010.01.T01:intron 35.0%
ACTATGTTAACACTGCGAAT+GGG + Chr1:308670-308689 MsG0180000010.01.T01:CDS 35.0%
AGTTATCACATCACATGTTG+CGG + Chr1:306851-306870 MsG0180000010.01.T01:intron 35.0%
AGTTGATCTATGAAAAACCC+TGG - Chr1:306209-306228 None:intergenic 35.0%
ATAAATTCTTGCCATGTGTC+AGG - Chr1:311780-311799 None:intergenic 35.0%
ATAGGAATCTGAACAACATG+AGG - Chr1:307306-307325 None:intergenic 35.0%
ATCTCTCTCATCATTACTAC+AGG - Chr1:310831-310850 None:intergenic 35.0%
ATCTGAACAACATGAGGAAA+CGG - Chr1:307300-307319 None:intergenic 35.0%
ATGTGAATGTTTACGTTCCT+AGG - Chr1:309976-309995 None:intergenic 35.0%
ATTATCCTAGGCAAGAATTC+TGG - Chr1:307849-307868 None:intergenic 35.0%
ATTCCTACTGCATTGAAAGA+AGG - Chr1:307351-307370 None:intergenic 35.0%
ATTGAAAGAAGGAACAGGTA+TGG - Chr1:307340-307359 None:intergenic 35.0%
ATTGCACCAACACATATATC+AGG - Chr1:308339-308358 None:intergenic 35.0%
CAACAGAATGTGATGCATAT+GGG - Chr1:308220-308239 None:intergenic 35.0%
CACAAATCACTGTTGAGAAA+GGG - Chr1:312172-312191 None:intergenic 35.0%
CATTTCTCAAGACATTACTC+GGG + Chr1:306372-306391 MsG0180000010.01.T01:CDS 35.0%
CCCCAAATGGTTTATTAGTT+TGG + Chr1:314643-314662 MsG0180000010.01.T01:three_prime_UTR 35.0%
CCTTGAGGACAAAATATGAA+GGG - Chr1:311265-311284 None:intergenic 35.0%
CTTGGATTCTATCAGATTCA+TGG - Chr1:308365-308384 None:intergenic 35.0%
GAAATTTGTCTTTATCTGCG+TGG + Chr1:309771-309790 MsG0180000010.01.T01:intron 35.0%
GAATTGCCTTCTAATACACA+AGG + Chr1:307647-307666 MsG0180000010.01.T01:CDS 35.0%
GACAAAATTGCAACTGAAGT+AGG + Chr1:305866-305885 MsG0180000010.01.T01:CDS 35.0%
GATATGGGGAATATGTTAAC+CGG + Chr1:312971-312990 MsG0180000010.01.T01:CDS 35.0%
GATGGAGAAATATAAACTGC+TGG - Chr1:308811-308830 None:intergenic 35.0%
GCAGTTTATATTTCTCCATC+AGG + Chr1:308811-308830 MsG0180000010.01.T01:CDS 35.0%
GCATTTCTCAAGACATTACT+CGG + Chr1:306371-306390 MsG0180000010.01.T01:CDS 35.0%
GCGAATCAATCTTCAAATGA+AGG + Chr1:305603-305622 MsG0180000010.01.T01:CDS 35.0%
GGATAAGGATTACAGTAATG+AGG - Chr1:306036-306055 None:intergenic 35.0%
GGGGAACTCAAAAATTGTAT+TGG - Chr1:313807-313826 None:intergenic 35.0%
GTAAACATTCACATACATGC+TGG + Chr1:309982-310001 MsG0180000010.01.T01:CDS 35.0%
GTATGAAACTAAATGTTGGG+TGG + Chr1:311535-311554 MsG0180000010.01.T01:intron 35.0%
GTATGTGTTCATAAATCGCA+TGG + Chr1:307483-307502 MsG0180000010.01.T01:CDS 35.0%
GTTCTTGGGACTATTAATGT+GGG + Chr1:306331-306350 MsG0180000010.01.T01:CDS 35.0%
GTTGCTCATATATTGCAGTA+TGG - Chr1:307178-307197 None:intergenic 35.0%
GTTTCAAAACATGTTCACCA+AGG - Chr1:312479-312498 None:intergenic 35.0%
TAAAAAATCCCCCTCATTTG+GGG - Chr1:313827-313846 None:intergenic 35.0%
TAAACTGCACCTAGTGTAAA+AGG + Chr1:311821-311840 MsG0180000010.01.T01:intron 35.0%
TAATCACCTCAATCCAACAT+TGG - Chr1:314729-314748 None:intergenic 35.0%
TAATTCCGCACAAACTTCTT+CGG + Chr1:306598-306617 MsG0180000010.01.T01:CDS 35.0%
TAATTCTAGACAACCGAAAC+AGG - Chr1:309486-309505 None:intergenic 35.0%
TAGAACAGTATGAGCTGAAA+AGG - Chr1:313469-313488 None:intergenic 35.0%
TAGATTGTTCGTGAAAGAAG+AGG + Chr1:309280-309299 MsG0180000010.01.T01:intron 35.0%
TCAAAAATTGTATTGGGGGA+GGG - Chr1:313800-313819 None:intergenic 35.0%
TCAGCTAAAACAGATGACAA+TGG - Chr1:310308-310327 None:intergenic 35.0%
TCATGTTGTTCAGATTCCTA+TGG + Chr1:307305-307324 MsG0180000010.01.T01:CDS 35.0%
TCCACTAAAGATGTTGAGAA+TGG + Chr1:306053-306072 MsG0180000010.01.T01:intron 35.0%
TCCTTGAGGACAAAATATGA+AGG - Chr1:311266-311285 None:intergenic 35.0%
TCTCCATCGTCATATTAGAT+TGG - Chr1:309562-309581 None:intergenic 35.0%
TCTCTTCCTAATACAACCAT+CGG + Chr1:309512-309531 MsG0180000010.01.T01:intron 35.0%
TCTGTATGGTACATCAAAGA+AGG + Chr1:309372-309391 MsG0180000010.01.T01:intron 35.0%
TGTTGGATTGAGGTGATTAA+TGG + Chr1:314730-314749 MsG0180000010.01.T01:three_prime_UTR 35.0%
TTCATCAAACAGCTTGACTA+GGG - Chr1:309061-309080 None:intergenic 35.0%
TTCGCAGTGTTAACATAGTT+CGG - Chr1:308669-308688 None:intergenic 35.0%
TTCTGATAATCGAAGTTTGC+AGG + Chr1:313339-313358 MsG0180000010.01.T01:CDS 35.0%
TTCTTGGGACTATTAATGTG+GGG + Chr1:306332-306351 MsG0180000010.01.T01:CDS 35.0%
TTGATTGATGAAAGAACTGG+AGG - Chr1:312645-312664 None:intergenic 35.0%
TTGATTGCATTTGGCCTAAT+TGG - Chr1:310562-310581 None:intergenic 35.0%
TTGCACCAACACATATATCA+GGG - Chr1:308338-308357 None:intergenic 35.0%
TTGTATCCAATGTTGGATTG+AGG + Chr1:314720-314739 MsG0180000010.01.T01:three_prime_UTR 35.0%
TTGTTCAGAAACATTGGTAC+TGG - Chr1:305637-305656 None:intergenic 35.0%
TTTCATCAAACAGCTTGACT+AGG - Chr1:309062-309081 None:intergenic 35.0%
TTTGTCTTTGAACAGCGAAA+CGG - Chr1:305852-305871 None:intergenic 35.0%
TTTGTTCATTAGCAAAGCCT+TGG + Chr1:312459-312478 MsG0180000010.01.T01:intron 35.0%
! AAAGTGCTACAAATGAGTGT+TGG + Chr1:314611-314630 MsG0180000010.01.T01:three_prime_UTR 35.0%
! AATGAAAGCACAAGATGTAC+AGG - Chr1:314819-314838 None:intergenic 35.0%
! AATGGATTCAGCTACAGTTA+AGG - Chr1:307202-307221 None:intergenic 35.0%
! AATTTTTGCGCATGAATTGG+AGG - Chr1:314676-314695 None:intergenic 35.0%
! ACTCATTTGTAGCACTTTTC+TGG - Chr1:314609-314628 None:intergenic 35.0%
! AGATTATCCTTGAAAGTGCA+TGG + Chr1:306763-306782 MsG0180000010.01.T01:intron 35.0%
! ATCAGAATTTTCATTCCCGT+AGG - Chr1:313326-313345 None:intergenic 35.0%
! ATTTTGCCAGTTAGCATGAT+TGG + Chr1:311935-311954 MsG0180000010.01.T01:intron 35.0%
! CTAAATAGTCCTGCTTTGAA+TGG + Chr1:312815-312834 MsG0180000010.01.T01:CDS 35.0%
! CTCAACATCTTTAGTGGATA+AGG - Chr1:306051-306070 None:intergenic 35.0%
! CTTTCTCAACAGTGATTTGT+GGG + Chr1:312171-312190 MsG0180000010.01.T01:intron 35.0%
! GAAGACTGTAGCATTTTTGA+TGG + Chr1:309738-309757 MsG0180000010.01.T01:intron 35.0%
! GATGCTATGTATTTTGCCAA+TGG + Chr1:311085-311104 MsG0180000010.01.T01:intron 35.0%
! TAAACTTTTTACTCCAGGGA+TGG + Chr1:312237-312256 MsG0180000010.01.T01:intron 35.0%
! TCAGAATTTTCATTCCCGTA+GGG - Chr1:313325-313344 None:intergenic 35.0%
! TGCCAATGGATTTGTTTGTT+GGG + Chr1:311099-311118 MsG0180000010.01.T01:intron 35.0%
! TGTAGCTGAATCCATTTTCT+AGG + Chr1:307206-307225 MsG0180000010.01.T01:intron 35.0%
! TGTTTCGGTTGTCTAGAATT+AGG + Chr1:309485-309504 MsG0180000010.01.T01:intron 35.0%
! TTGCCAATGGATTTGTTTGT+TGG + Chr1:311098-311117 MsG0180000010.01.T01:intron 35.0%
! TTTCTCAACAGTGATTTGTG+GGG + Chr1:312172-312191 MsG0180000010.01.T01:intron 35.0%
! TTTTCTGAATACCCTCTTGT+TGG + Chr1:308277-308296 MsG0180000010.01.T01:intron 35.0%
!! AACTCTGTTGGTAATATGCA+AGG + Chr1:310347-310366 MsG0180000010.01.T01:CDS 35.0%
!! AAGATTCTAGAGTCTTCGTT+CGG - Chr1:305330-305349 None:intergenic 35.0%
!! AATATGGTTTCAGGTTATCG+GGG + Chr1:306526-306545 MsG0180000010.01.T01:intron 35.0%
!! ATTTGAAGATTGATTCGCCA+TGG - Chr1:305601-305620 None:intergenic 35.0%
!! CTAATGCTTAGGCTTTGTTT+GGG + Chr1:313569-313588 MsG0180000010.01.T01:intron 35.0%
!! CTTTGAATGGTTTGTTGGAA+GGG + Chr1:312828-312847 MsG0180000010.01.T01:CDS 35.0%
!! GTGCATGGTAATTGTTGTTT+AGG + Chr1:306778-306797 MsG0180000010.01.T01:intron 35.0%
!!! GTGGGGCTTCTTTATTTTTT+TGG + Chr1:312189-312208 MsG0180000010.01.T01:intron 35.0%
!!! TATATTTTGACCATCTGTCC+TGG - Chr1:312678-312697 None:intergenic 35.0%
AAAAAATCCCCCTCATTTGG+GGG - Chr1:313826-313845 None:intergenic 40.0%
AAATCACTGTTGAGAAAGGG+TGG - Chr1:312169-312188 None:intergenic 40.0%
AAATGAACAGAGAGATACCG+CGG + Chr1:310628-310647 MsG0180000010.01.T01:CDS 40.0%
AAGCATGATGTAAGGAGGAT+AGG + Chr1:312359-312378 MsG0180000010.01.T01:intron 40.0%
AATATGTTAACCGGAACGGA+AGG + Chr1:312980-312999 MsG0180000010.01.T01:CDS 40.0%
AATTGTCCTTTAACCTTGCG+AGG - Chr1:311485-311504 None:intergenic 40.0%
ACACTCCATGCAGTTCAATA+AGG - Chr1:312387-312406 None:intergenic 40.0%
ACATCAAAGTATGACAGTGG+AGG - Chr1:314756-314775 None:intergenic 40.0%
ACCAACACATATATCAGGGA+TGG - Chr1:308334-308353 None:intergenic 40.0%
ACCTGCACCATTATAGGATT+TGG - Chr1:308838-308857 None:intergenic 40.0%
ACTACAAAACACAAACCAGC+TGG - Chr1:306885-306904 None:intergenic 40.0%
ACTATTAATGTGGGGGATCA+GGG + Chr1:306340-306359 MsG0180000010.01.T01:CDS 40.0%
ACTGCATTGAAAGAAGGAAC+AGG - Chr1:307345-307364 None:intergenic 40.0%
AGATCTCTAGCTGACATGAT+AGG + Chr1:312052-312071 MsG0180000010.01.T01:intron 40.0%
AGATGACAATGGAGCTGAAT+CGG - Chr1:310297-310316 None:intergenic 40.0%
AGGAAATCAAGCTGGAAATC+AGG + Chr1:307251-307270 MsG0180000010.01.T01:CDS 40.0%
AGGAACCTTATTGAACTGCA+TGG + Chr1:312379-312398 MsG0180000010.01.T01:intron 40.0%
AGGAATTGCTATGCAGCATT+TGG + Chr1:308621-308640 MsG0180000010.01.T01:CDS 40.0%
AGTAACCGAGGTATAACCTA+AGG + Chr1:306161-306180 MsG0180000010.01.T01:intron 40.0%
ATACAGTGTGTTGAGGGAAT+GGG - Chr1:307467-307486 None:intergenic 40.0%
ATACTTGGGTTTCATGGCTT+AGG + Chr1:309156-309175 MsG0180000010.01.T01:intron 40.0%
ATAGAAGACATTGAGAGGAG+AGG - Chr1:313878-313897 None:intergenic 40.0%
ATATATCAGGGATGGAAAGC+AGG - Chr1:308326-308345 None:intergenic 40.0%
ATCAGGGCCAAATCCTATAA+TGG + Chr1:308828-308847 MsG0180000010.01.T01:CDS 40.0%
ATCATACGATTCAAATGGGG+TGG + Chr1:311411-311430 MsG0180000010.01.T01:intron 40.0%
ATCTAGATCATGGTTCTCTG+GGG + Chr1:309668-309687 MsG0180000010.01.T01:intron 40.0%
ATGAAAAACCCTGGATCGAA+CGG - Chr1:306200-306219 None:intergenic 40.0%
ATGATCTGCTCTGCATGATT+AGG + Chr1:312126-312145 MsG0180000010.01.T01:intron 40.0%
ATGCTCCATCTTCAAGTGAA+AGG + Chr1:310945-310964 MsG0180000010.01.T01:CDS 40.0%
ATTATAGGATTTGGCCCTGA+TGG - Chr1:308829-308848 None:intergenic 40.0%
ATTTCACACAGTGTGGTTCT+TGG + Chr1:306316-306335 MsG0180000010.01.T01:CDS 40.0%
CAATCTAGATCATGGTTCTC+TGG + Chr1:309666-309685 MsG0180000010.01.T01:intron 40.0%
CACGTGTTATACTGCATACT+TGG + Chr1:309141-309160 MsG0180000010.01.T01:intron 40.0%
CAGTCAGAGTCAGTACAAAT+AGG + Chr1:308601-308620 MsG0180000010.01.T01:CDS 40.0%
CCAAATGCAATCAACTAGCA+GGG + Chr1:310568-310587 MsG0180000010.01.T01:CDS 40.0%
CCACAAATCACTGTTGAGAA+AGG - Chr1:312173-312192 None:intergenic 40.0%
CCTTTCTCAACAGTGATTTG+TGG + Chr1:312170-312189 MsG0180000010.01.T01:intron 40.0%
CGGTCCATCATACAAATTGA+CGG + Chr1:311365-311384 MsG0180000010.01.T01:intron 40.0%
CTCAAAAATTGTATTGGGGG+AGG - Chr1:313801-313820 None:intergenic 40.0%
CTCCCAACAAACAAATCCAT+TGG - Chr1:311104-311123 None:intergenic 40.0%
CTCTGTTCATTTACCTGTTC+AGG - Chr1:310620-310639 None:intergenic 40.0%
CTCTTCCTAATACAACCATC+GGG + Chr1:309513-309532 MsG0180000010.01.T01:intron 40.0%
CTGTCAGAAGGAAATGATGA+AGG - Chr1:310457-310476 None:intergenic 40.0%
CTTCAAACAAGCTCCTTGTT+TGG + Chr1:309892-309911 MsG0180000010.01.T01:CDS 40.0%
GAAACTGAAGGAAATCAAGC+TGG + Chr1:307243-307262 MsG0180000010.01.T01:CDS 40.0%
GAACACATACAGTGTGTTGA+GGG - Chr1:307473-307492 None:intergenic 40.0%
GAACATGCACTCTCTCAAAA+TGG + Chr1:307505-307524 MsG0180000010.01.T01:CDS 40.0%
GAAGAAGTTTGTGCGGAATT+AGG - Chr1:306599-306618 None:intergenic 40.0%
GAATGGCCATACATTGCATT+TGG + Chr1:306070-306089 MsG0180000010.01.T01:CDS 40.0%
GAGCCAATTGCTGAAACAAT+TGG - Chr1:310086-310105 None:intergenic 40.0%
GATATGGGGAATATGCTAAC+TGG + Chr1:313169-313188 MsG0180000010.01.T01:CDS 40.0%
GCACCAATTGTTTCAGCAAT+TGG + Chr1:310080-310099 MsG0180000010.01.T01:CDS 40.0%
GCACTCTCTCAAAATGGTAA+TGG + Chr1:307511-307530 MsG0180000010.01.T01:intron 40.0%
GCAGAATCTGTTGTTAATGC+TGG + Chr1:308784-308803 MsG0180000010.01.T01:CDS 40.0%
GCCATTCTCAACATCTTTAG+TGG - Chr1:306057-306076 None:intergenic 40.0%
GCTGGTATGACATTTCTAAC+AGG - Chr1:310191-310210 None:intergenic 40.0%
GGAATTGCTATGCAGCATTT+GGG + Chr1:308622-308641 MsG0180000010.01.T01:CDS 40.0%
GGATACGATAGTGAGAAAGA+AGG - Chr1:305949-305968 None:intergenic 40.0%
GGTCCATCATACAAATTGAC+GGG + Chr1:311366-311385 MsG0180000010.01.T01:intron 40.0%
GGTGAATTATCGTCTTAGGT+GGG + Chr1:311681-311700 MsG0180000010.01.T01:intron 40.0%
GGTTCTTGGGACTATTAATG+TGG + Chr1:306330-306349 MsG0180000010.01.T01:CDS 40.0%
GTACTTTGAGCATGCTTTGA+TGG + Chr1:308013-308032 MsG0180000010.01.T01:intron 40.0%
GTCCATCATACAAATTGACG+GGG + Chr1:311367-311386 MsG0180000010.01.T01:intron 40.0%
GTGAATTATCGTCTTAGGTG+GGG + Chr1:311682-311701 MsG0180000010.01.T01:intron 40.0%
GTGAGAGAGAGTGAAAGAAA+GGG + Chr1:307962-307981 MsG0180000010.01.T01:intron 40.0%
GTGCCAGTTAAAGATCACAT+AGG + Chr1:308239-308258 MsG0180000010.01.T01:intron 40.0%
GTTCCTTCTTTCAATGCAGT+AGG + Chr1:307345-307364 MsG0180000010.01.T01:intron 40.0%
TACTGCATACTTGGGTTTCA+TGG + Chr1:309150-309169 MsG0180000010.01.T01:intron 40.0%
TAGAAGACATTGAGAGGAGA+GGG - Chr1:313877-313896 None:intergenic 40.0%
TAGGAGAAAAATACCTCGCA+AGG + Chr1:311469-311488 MsG0180000010.01.T01:intron 40.0%
TAGGCAAACTATCTGTCAGA+AGG - Chr1:310469-310488 None:intergenic 40.0%
TCAATCAAAGTCAGGAAACC+AGG + Chr1:312657-312676 MsG0180000010.01.T01:CDS 40.0%
TCACACCTTAGAAACTCTGT+TGG + Chr1:310335-310354 MsG0180000010.01.T01:CDS 40.0%
TCATTTACCTGTTCAGGTCT+TGG - Chr1:310614-310633 None:intergenic 40.0%
TCCAACAAACCATTCAAAGC+AGG - Chr1:312827-312846 None:intergenic 40.0%
TCCATCCCTGATATATGTGT+TGG + Chr1:308330-308349 MsG0180000010.01.T01:intron 40.0%
TCTTCAACTCCTGCAACTTT+AGG + Chr1:309928-309947 MsG0180000010.01.T01:CDS 40.0%
TCTTGGGACTATTAATGTGG+GGG + Chr1:306333-306352 MsG0180000010.01.T01:CDS 40.0%
TGAAACAATTGGTGCAAGAG+AGG - Chr1:310075-310094 None:intergenic 40.0%
TGAAAGTTTACAGCCCTAGA+GGG - Chr1:313983-314002 None:intergenic 40.0%
TGAACACATACAGTGTGTTG+AGG - Chr1:307474-307493 None:intergenic 40.0%
TGACAAACCTGCACCATTAT+AGG - Chr1:308844-308863 None:intergenic 40.0%
TGATCTGCTCTGCATGATTA+GGG + Chr1:312127-312146 MsG0180000010.01.T01:intron 40.0%
TGGTGAATTATCGTCTTAGG+TGG + Chr1:311680-311699 MsG0180000010.01.T01:intron 40.0%
TGTGAGAGAGAGTGAAAGAA+AGG + Chr1:307961-307980 MsG0180000010.01.T01:intron 40.0%
TGTGTGAAATTTGCCCAACA+CGG - Chr1:306306-306325 None:intergenic 40.0%
TGTTGAGAAAGGGTGGAATA+GGG - Chr1:312162-312181 None:intergenic 40.0%
TGTTGTGGTGCACACATTTA+TGG - Chr1:312578-312597 None:intergenic 40.0%
TTCCAGGTTAAACAGCTGAA+TGG - Chr1:311894-311913 None:intergenic 40.0%
TTCTGTACGATGCAATACAG+TGG - Chr1:307696-307715 None:intergenic 40.0%
TTGTATTTGGACCTGACACA+TGG + Chr1:311766-311785 MsG0180000010.01.T01:intron 40.0%
TTGTCTTTGAACAGCGAAAC+GGG - Chr1:305851-305870 None:intergenic 40.0%
TTGTGACTCTAGCATATTGC+AGG + Chr1:308526-308545 MsG0180000010.01.T01:intron 40.0%
TTGTTGGGAGGTTATTTGCA+TGG + Chr1:311114-311133 MsG0180000010.01.T01:intron 40.0%
TTTCACACAGTGTGGTTCTT+GGG + Chr1:306317-306336 MsG0180000010.01.T01:CDS 40.0%
! AACAAGGAGCTTGTTTGAAG+TGG - Chr1:309892-309911 None:intergenic 40.0%
! AAGCACTTCTGTTTGAGACT+TGG - Chr1:308383-308402 None:intergenic 40.0%
! AAGGGCTTCTGATGATCTTT+TGG + Chr1:314302-314321 MsG0180000010.01.T01:CDS 40.0%
! ATGAGTCGTTGCTGATTAAC+TGG - Chr1:305896-305915 None:intergenic 40.0%
! ATGTTTTGTGTCTCTGTAGC+TGG + Chr1:309587-309606 MsG0180000010.01.T01:intron 40.0%
! CAATGGATTTGTTTGTTGGG+AGG + Chr1:311102-311121 MsG0180000010.01.T01:intron 40.0%
! CCCTTCATATTTTGTCCTCA+AGG + Chr1:311262-311281 MsG0180000010.01.T01:intron 40.0%
! GAGCTTGTTTGAAGTGGAAA+TGG - Chr1:309886-309905 None:intergenic 40.0%
! GTTGGTTTACAGGACAACTT+AGG - Chr1:313960-313979 None:intergenic 40.0%
! TAATTGTGACTAGCTGACAG+TGG + Chr1:314775-314794 MsG0180000010.01.T01:three_prime_UTR 40.0%
! TATGAGTGGTTTAGAGCGTA+AGG + Chr1:311012-311031 MsG0180000010.01.T01:CDS 40.0%
! TCCTGCTTTGAATGGTTTGT+TGG + Chr1:312823-312842 MsG0180000010.01.T01:CDS 40.0%
! TTAAACTTGTTCTCACCCGA+TGG - Chr1:309531-309550 None:intergenic 40.0%
! TTCTGAAAGTGGAGTAGAGA+AGG + Chr1:310697-310716 MsG0180000010.01.T01:CDS 40.0%
!! AAGATTGATTCGCCATGGTA+TGG - Chr1:305596-305615 None:intergenic 40.0%
!! ACAACATTTACCGACTCAAG+AGG - Chr1:307145-307164 None:intergenic 40.0%
!! AGATTCTAGAGTCTTCGTTC+GGG - Chr1:305329-305348 None:intergenic 40.0%
!! AGGACAACTTAGGCTTTGTT+TGG - Chr1:313950-313969 None:intergenic 40.0%
!! ATTGGCTCTAGACCAAACAA+TGG + Chr1:310098-310117 MsG0180000010.01.T01:CDS 40.0%
!! CAGCAACGACTCATTTTTAG+AGG + Chr1:305902-305921 MsG0180000010.01.T01:CDS 40.0%
!! GCTAATGCTTAGGCTTTGTT+TGG + Chr1:313568-313587 MsG0180000010.01.T01:intron 40.0%
!! GCTTTGAATGGTTTGTTGGA+AGG + Chr1:312827-312846 MsG0180000010.01.T01:CDS 40.0%
!! GGACAACTTAGGCTTTGTTT+GGG - Chr1:313949-313968 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + Chr1:313576-313595 MsG0180000010.01.T01:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - Chr1:313595-313576 None:intergenic 40.0%
!! TTGGCTCTAGACCAAACAAT+GGG + Chr1:310099-310118 MsG0180000010.01.T01:CDS 40.0%
!!! AGCTGGTTTGTGTTTTGTAG+TGG + Chr1:306884-306903 MsG0180000010.01.T01:intron 40.0%
!!! AGGTTTTGATTGCCTCAGTT+TGG - Chr1:310811-310830 None:intergenic 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG - Chr1:313915-313934 None:intergenic 40.0%
!!! GGTTTTGATTGCCTCAGTTT+GGG - Chr1:310810-310829 None:intergenic 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG + Chr1:313814-313833 MsG0180000010.01.T01:intron 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG + Chr1:313813-313832 MsG0180000010.01.T01:intron 40.0%
AAAACTGCTCCTCTTGGACT+GGG + Chr1:310989-311008 MsG0180000010.01.T01:CDS 45.0%
AACATGCTCCTTAAGCCATC+AGG - Chr1:312881-312900 None:intergenic 45.0%
AAGGTCAACCTGGAGAAAGA+AGG - Chr1:314190-314209 None:intergenic 45.0%
AATTAGAAGAGTGGTCGTCG+AGG - Chr1:305474-305493 None:intergenic 45.0%
ACAGCACGGAAGATATCTGT+AGG - Chr1:314249-314268 None:intergenic 45.0%
ACCAAGGGCTTGTGATACAA+TGG - Chr1:313056-313075 None:intergenic 45.0%
ACGTAGAAGGGTCAGTTTAC+AGG - Chr1:314038-314057 None:intergenic 45.0%
ACTGACCGAAGAAGTTTGTG+CGG - Chr1:306606-306625 None:intergenic 45.0%
AGAAAGCCCACAGATGAACA+TGG + Chr1:313114-313133 MsG0180000010.01.T01:CDS 45.0%
AGAGAGAGTGAAAGAAAGGG+AGG + Chr1:307965-307984 MsG0180000010.01.T01:intron 45.0%
AGAGCAGATCATGCAGCAAA+AGG - Chr1:312118-312137 None:intergenic 45.0%
AGCTAGACAAGAGACTAGTG+AGG + Chr1:309431-309450 MsG0180000010.01.T01:intron 45.0%
AGGTTGACAGTCAGGATATG+GGG + Chr1:313155-313174 MsG0180000010.01.T01:CDS 45.0%
AGTGTAAAAGGGTTTGGCGT+TGG + Chr1:311833-311852 MsG0180000010.01.T01:intron 45.0%
AGTTTGGGTCTGGTTGTGAT+CGG - Chr1:310795-310814 None:intergenic 45.0%
ATCTGAACCAAGACCTGAAC+AGG + Chr1:310604-310623 MsG0180000010.01.T01:CDS 45.0%
ATGCCCATGATACAAGCTCT+CGG + Chr1:313247-313266 MsG0180000010.01.T01:CDS 45.0%
ATGCTAACTGGAACGGAAAC+AGG + Chr1:313181-313200 MsG0180000010.01.T01:CDS 45.0%
ATGTTCATCTGTGGGCTTTC+TGG - Chr1:313115-313134 None:intergenic 45.0%
ATTAGAAGAGTGGTCGTCGA+GGG - Chr1:305473-305492 None:intergenic 45.0%
ATTCTGCTCGTTGATCTCCA+AGG - Chr1:307631-307650 None:intergenic 45.0%
ATTGGGGTGGGATATGTGAT+AGG + Chr1:311450-311469 MsG0180000010.01.T01:intron 45.0%
ATTGTATCACAAGCCCTTGG+TGG + Chr1:313055-313074 MsG0180000010.01.T01:CDS 45.0%
CAGAATGTGATGCATATGGG+TGG - Chr1:308217-308236 None:intergenic 45.0%
CATACAGTGTGTTGAGGGAA+TGG - Chr1:307468-307487 None:intergenic 45.0%
CATCATACAAATTGACGGGG+AGG + Chr1:311370-311389 MsG0180000010.01.T01:intron 45.0%
CCAAGGGCTTGTGATACAAT+GGG - Chr1:313055-313074 None:intergenic 45.0%
CCCTGCTAGTTGATTGCATT+TGG - Chr1:310571-310590 None:intergenic 45.0%
CGTACAGAACAGTTGCTTAG+TGG + Chr1:307707-307726 MsG0180000010.01.T01:CDS 45.0%
CTAGACCAAACAATGGGGAA+GGG + Chr1:310105-310124 MsG0180000010.01.T01:CDS 45.0%
CTCCCCGTCAATTTGTATGA+TGG - Chr1:311372-311391 None:intergenic 45.0%
CTGAAAGTTTACAGCCCTAG+AGG - Chr1:313984-314003 None:intergenic 45.0%
CTGAACAACACACCATACCA+TGG + Chr1:305581-305600 MsG0180000010.01.T01:exon 45.0%
CTGACAGTGTTCATCATCTG+CGG - Chr1:312923-312942 None:intergenic 45.0%
CTGTTGAGAAAGGGTGGAAT+AGG - Chr1:312163-312182 None:intergenic 45.0%
GAAAGTTTACAGCCCTAGAG+GGG - Chr1:313982-314001 None:intergenic 45.0%
GAACAACATGAGGAAACGGT+TGG - Chr1:307296-307315 None:intergenic 45.0%
GACTATTAATGTGGGGGATC+AGG + Chr1:306339-306358 MsG0180000010.01.T01:CDS 45.0%
GACTGTTACCTTCTTTCTCC+AGG + Chr1:314179-314198 MsG0180000010.01.T01:intron 45.0%
GAGCAGATCATGCAGCAAAA+GGG - Chr1:312117-312136 None:intergenic 45.0%
GATGACAATGGAGCTGAATC+GGG - Chr1:310296-310315 None:intergenic 45.0%
GATGTAAGTAAGCTGCTCGA+AGG + Chr1:314503-314522 MsG0180000010.01.T01:CDS 45.0%
GCACCTAGTGTAAAAGGGTT+TGG + Chr1:311827-311846 MsG0180000010.01.T01:intron 45.0%
GCAGGAGTTGAAGAAGAAAG+TGG - Chr1:309922-309941 None:intergenic 45.0%
GCCAAATCCTATAATGGTGC+AGG + Chr1:308834-308853 MsG0180000010.01.T01:CDS 45.0%
GCCAAATGCAATCAACTAGC+AGG + Chr1:310567-310586 MsG0180000010.01.T01:CDS 45.0%
GCTAGACAAGAGACTAGTGA+GGG + Chr1:309432-309451 MsG0180000010.01.T01:intron 45.0%
GCTAGTGCAAATAGTAACCG+AGG + Chr1:306149-306168 MsG0180000010.01.T01:CDS 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG - Chr1:313906-313925 None:intergenic 45.0%
GGCAACCCTTGTGTATTAGA+AGG - Chr1:307656-307675 None:intergenic 45.0%
GGGGAATATGCTAACTGGAA+CGG + Chr1:313174-313193 MsG0180000010.01.T01:CDS 45.0%
GGGGAATATGTTAACCGGAA+CGG + Chr1:312976-312995 MsG0180000010.01.T01:CDS 45.0%
GGGGAATTGGCTGAAATGAT+GGG - Chr1:307447-307466 None:intergenic 45.0%
GGGTCAGTTTACAGGCTAAA+AGG - Chr1:314030-314049 None:intergenic 45.0%
GGTGCACTTCTACTTGAACT+GGG + Chr1:308643-308662 MsG0180000010.01.T01:CDS 45.0%
GGTTCTGTAGCAGAGAATAG+TGG - Chr1:313094-313113 None:intergenic 45.0%
GTGGAGATACTGAATCCAGA+TGG - Chr1:310260-310279 None:intergenic 45.0%
GTGGTTAGTGCTTCAAGTGT+TGG - Chr1:307677-307696 None:intergenic 45.0%
TACAGTGTGTTGAGGGAATG+GGG - Chr1:307466-307485 None:intergenic 45.0%
TCAGGCCTGTTTGACATAGT+TGG + Chr1:314000-314019 MsG0180000010.01.T01:intron 45.0%
TCTAGACCAAACAATGGGGA+AGG + Chr1:310104-310123 MsG0180000010.01.T01:CDS 45.0%
TCTAGATCATGGTTCTCTGG+GGG + Chr1:309669-309688 MsG0180000010.01.T01:intron 45.0%
TCTCACCCGATGGTTGTATT+AGG - Chr1:309521-309540 None:intergenic 45.0%
TCTCGCCTTTCACTTGAAGA+TGG - Chr1:310953-310972 None:intergenic 45.0%
TCTGCTGATCTAGGTGTAAG+AGG + Chr1:308571-308590 MsG0180000010.01.T01:CDS 45.0%
TCTGTAGCAGAGAATAGTGG+TGG - Chr1:313091-313110 None:intergenic 45.0%
TGAAAAACCCTGGATCGAAC+GGG - Chr1:306199-306218 None:intergenic 45.0%
TGACAGTGTTCATCATCTGC+GGG - Chr1:312922-312941 None:intergenic 45.0%
TGCCATTCAGCTGTTTAACC+TGG + Chr1:311889-311908 MsG0180000010.01.T01:intron 45.0%
TGCTAACTGGAACGGAAACA+GGG + Chr1:313182-313201 MsG0180000010.01.T01:CDS 45.0%
TGGGCAAATTTCACACAGTG+TGG + Chr1:306309-306328 MsG0180000010.01.T01:CDS 45.0%
TGGGGAATTGGCTGAAATGA+TGG - Chr1:307448-307467 None:intergenic 45.0%
TGTGGTGCACACATTTATGG+AGG - Chr1:312575-312594 None:intergenic 45.0%
TGTTCAGATTCCTATGGCTG+CGG + Chr1:307311-307330 MsG0180000010.01.T01:CDS 45.0%
TTGACTCACCTGATGGCTTA+AGG + Chr1:312870-312889 MsG0180000010.01.T01:CDS 45.0%
TTGTATCACAAGCCCTTGGT+GGG + Chr1:313056-313075 MsG0180000010.01.T01:CDS 45.0%
TTTCCTTCAGTTTCGTTCCC+CGG - Chr1:307237-307256 None:intergenic 45.0%
! ACGCCAAACCCTTTTACACT+AGG - Chr1:311833-311852 None:intergenic 45.0%
! AGATATCTGTAGGTGGACTC+AGG - Chr1:314239-314258 None:intergenic 45.0%
! ATCCATTTTCTAGGCTCCAC+CGG + Chr1:307215-307234 MsG0180000010.01.T01:intron 45.0%
! ATTGTATTGGGGGAGGGTTT+TGG - Chr1:313794-313813 None:intergenic 45.0%
! CAAACAAGCTCCTTGTTTGG+CGG + Chr1:309895-309914 MsG0180000010.01.T01:CDS 45.0%
! CAGGTTGACAGTCAGGATAT+GGG + Chr1:313154-313173 MsG0180000010.01.T01:CDS 45.0%
! CTGCATTTTCAGCTACAGCA+CGG - Chr1:314263-314282 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + Chr1:313581-313600 MsG0180000010.01.T01:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - Chr1:313600-313581 None:intergenic 45.0%
! GAAGGGTTTTCACAGCAAAC+GGG + Chr1:312845-312864 MsG0180000010.01.T01:CDS 45.0%
! GACAGCACAATTTTGTCAGG+TGG + Chr1:310371-310390 MsG0180000010.01.T01:CDS 45.0%
! GGAAGGGTTTTCACAGCAAA+CGG + Chr1:312844-312863 MsG0180000010.01.T01:CDS 45.0%
! GGAGACAGCACAATTTTGTC+AGG + Chr1:310368-310387 MsG0180000010.01.T01:CDS 45.0%
! GGCATATCTTTTCCCCCTTT+TGG + Chr1:307004-307023 MsG0180000010.01.T01:intron 45.0%
! GTTGGTTGCACTTCTGAAAG+TGG + Chr1:310686-310705 MsG0180000010.01.T01:CDS 45.0%
! TCTGTTGAAGCATCCTTGAG+AGG - Chr1:313027-313046 None:intergenic 45.0%
! TTCAGAAGTGCAACCAACTG+AGG - Chr1:310684-310703 None:intergenic 45.0%
! TTGTATTGGGGGAGGGTTTT+GGG - Chr1:313793-313812 None:intergenic 45.0%
! TTTGAGTTCCCCCAAATGAG+GGG + Chr1:313815-313834 MsG0180000010.01.T01:intron 45.0%
!! CAGAGTTTCTAAGGTGTGAC+TGG - Chr1:310334-310353 None:intergenic 45.0%
!! CTCTAGGGCTGTAAACTTTC+AGG + Chr1:313982-314001 MsG0180000010.01.T01:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + Chr1:313580-313599 MsG0180000010.01.T01:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - Chr1:313599-313580 None:intergenic 45.0%
!! TGGCTCTAGACCAAACAATG+GGG + Chr1:310100-310119 MsG0180000010.01.T01:CDS 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG - Chr1:313919-313938 None:intergenic 45.0%
AAAAACCCTGGATCGAACGG+GGG - Chr1:306197-306216 None:intergenic 50.0%
AAATCAGGCACCATCTGGAC+AGG + Chr1:307266-307285 MsG0180000010.01.T01:CDS 50.0%
ACATTGAGAGGAGAGGGCTT+TGG - Chr1:313871-313890 None:intergenic 50.0%
ACCAGACTCCAACCTCCTAA+AGG + Chr1:312605-312624 MsG0180000010.01.T01:CDS 50.0%
ACCTTCAACCAGTGGCTGAT+AGG + Chr1:314205-314224 MsG0180000010.01.T01:CDS 50.0%
ACTAGCAGGGACTTGTCTTC+TGG + Chr1:310581-310600 MsG0180000010.01.T01:CDS 50.0%
ACTCTCCCATCTAACCCTTC+TGG + Chr1:310212-310231 MsG0180000010.01.T01:CDS 50.0%
ACTGCGAATGGGACAGTCTT+CGG + Chr1:308681-308700 MsG0180000010.01.T01:CDS 50.0%
ACTGGCCAGAATTCTTGCCT+AGG + Chr1:307841-307860 MsG0180000010.01.T01:intron 50.0%
AGAAAGTGGACCGCCAAACA+AGG - Chr1:309908-309927 None:intergenic 50.0%
AGAAGAAGATCTGCGTGCGT+TGG - Chr1:305361-305380 None:intergenic 50.0%
AGGTTGGCAGTCAGGATATG+GGG + Chr1:312957-312976 MsG0180000010.01.T01:CDS 50.0%
AGTCAGGAAACCAGGACAGA+TGG + Chr1:312665-312684 MsG0180000010.01.T01:CDS 50.0%
ATCAATCTGACTACCGCTGG+TGG - Chr1:312771-312790 None:intergenic 50.0%
ATCCTGACTGTCAACCTGCT+GGG - Chr1:313152-313171 None:intergenic 50.0%
ATCGTCTTAGGTGGGGTGAA+GGG + Chr1:311689-311708 MsG0180000010.01.T01:intron 50.0%
ATGATACAAGCTCTCGGAGG+GGG + Chr1:313253-313272 MsG0180000010.01.T01:CDS 50.0%
ATGTTAACCGGAACGGAAGG+AGG + Chr1:312983-313002 MsG0180000010.01.T01:CDS 50.0%
ATTAATGTGGGGGATCAGGG+TGG + Chr1:306343-306362 MsG0180000010.01.T01:CDS 50.0%
CAAAACTGCTCCTCTTGGAC+TGG + Chr1:310988-311007 MsG0180000010.01.T01:CDS 50.0%
CAAACAATGGGGAAGGGACA+AGG + Chr1:310111-310130 MsG0180000010.01.T01:CDS 50.0%
CAAACAGCTTGACTAGGGCA+AGG - Chr1:309056-309075 None:intergenic 50.0%
CACATCAATCTGACTACCGC+TGG - Chr1:312774-312793 None:intergenic 50.0%
CAGCGGTAGTCAGATTGATG+TGG + Chr1:312772-312791 MsG0180000010.01.T01:CDS 50.0%
CATGATACAAGCTCTCGGAG+GGG + Chr1:313252-313271 MsG0180000010.01.T01:CDS 50.0%
CCAGCTGTCTAGCAGTGAAA+GGG + Chr1:314284-314303 MsG0180000010.01.T01:CDS 50.0%
CCATCTAACCCTTCTGGCAT+CGG + Chr1:310218-310237 MsG0180000010.01.T01:CDS 50.0%
CCATGATACAAGCTCTCGGA+GGG + Chr1:313251-313270 MsG0180000010.01.T01:CDS 50.0%
CCCATTGTATCACAAGCCCT+TGG + Chr1:313052-313071 MsG0180000010.01.T01:CDS 50.0%
CCTCCGAGAGCTTGTATCAT+GGG - Chr1:313253-313272 None:intergenic 50.0%
CCTGTAAACCAACCCCTCTA+GGG + Chr1:313967-313986 MsG0180000010.01.T01:intron 50.0%
CGAACCTGAATCACCAGAAC+CGG - Chr1:310156-310175 None:intergenic 50.0%
CGATCAATCCTATCAGCCAC+TGG - Chr1:314216-314235 None:intergenic 50.0%
CGATGCCAGAAGGGTTAGAT+GGG - Chr1:310220-310239 None:intergenic 50.0%
CGGTAGTCAGATTGATGTGG+CGG + Chr1:312775-312794 MsG0180000010.01.T01:CDS 50.0%
CTAGCATATTGCAGGACGCA+TGG + Chr1:308534-308553 MsG0180000010.01.T01:intron 50.0%
CTTGTCCCTTCCCCATTGTT+TGG - Chr1:310113-310132 None:intergenic 50.0%
GAAAAACCCTGGATCGAACG+GGG - Chr1:306198-306217 None:intergenic 50.0%
GAACCTGAATCACCAGAACC+GGG - Chr1:310155-310174 None:intergenic 50.0%
GAGGGAACTTCTGCTGATCT+AGG + Chr1:308562-308581 MsG0180000010.01.T01:CDS 50.0%
GATCCGTCATCAGCACCTTT+AGG - Chr1:312623-312642 None:intergenic 50.0%
GCAACCAACTGAGGATACAC+CGG - Chr1:310675-310694 None:intergenic 50.0%
GCACGGAAGATATCTGTAGG+TGG - Chr1:314246-314265 None:intergenic 50.0%
GCCAGCCAACTATGTCAAAC+AGG - Chr1:314008-314027 None:intergenic 50.0%
GCCTGTTTGACATAGTTGGC+TGG + Chr1:314004-314023 MsG0180000010.01.T01:intron 50.0%
GGCTGACCATGTTCATCTGT+GGG - Chr1:313123-313142 None:intergenic 50.0%
GGGTGCACTTCTACTTGAAC+TGG + Chr1:308642-308661 MsG0180000010.01.T01:CDS 50.0%
GGTAGTCAGATTGATGTGGC+GGG + Chr1:312776-312795 MsG0180000010.01.T01:CDS 50.0%
GGTGAGCATTAGCTGCAAGT+TGG + Chr1:313539-313558 MsG0180000010.01.T01:intron 50.0%
GTAGCAGAGAATAGTGGTGG+AGG - Chr1:313088-313107 None:intergenic 50.0%
GTGTCTCTGTAGCTGGATGT+CGG + Chr1:309594-309613 MsG0180000010.01.T01:intron 50.0%
GTGTTGAGGGAATGGGGAAT+TGG - Chr1:307460-307479 None:intergenic 50.0%
GTTCAGATTCCTATGGCTGC+GGG + Chr1:307312-307331 MsG0180000010.01.T01:CDS 50.0%
GTTGCGGTAACTATTCCAGC+TGG + Chr1:306867-306886 MsG0180000010.01.T01:intron 50.0%
TATCCTGACTGTCAACCTGC+TGG - Chr1:313153-313172 None:intergenic 50.0%
TATCGTCTTAGGTGGGGTGA+AGG + Chr1:311688-311707 MsG0180000010.01.T01:intron 50.0%
TCAATCTGACTACCGCTGGT+GGG - Chr1:312770-312789 None:intergenic 50.0%
TCACAACCAGACCCAAACTG+AGG + Chr1:310796-310815 MsG0180000010.01.T01:intron 50.0%
TCAGACACACACTCCTGCTA+CGG + Chr1:306109-306128 MsG0180000010.01.T01:CDS 50.0%
TCATTTGCAAATGGGGGCCA+GGG + Chr1:306560-306579 MsG0180000010.01.T01:CDS 50.0%
TCCAGCTGTCTAGCAGTGAA+AGG + Chr1:314283-314302 MsG0180000010.01.T01:CDS 50.0%
TCCTGTAAACCAACCCCTCT+AGG + Chr1:313966-313985 MsG0180000010.01.T01:intron 50.0%
TCTGCAGCAGAGAATAGTGG+TGG - Chr1:313286-313305 None:intergenic 50.0%
TGATTGCCTCAGTTTGGGTC+TGG - Chr1:310805-310824 None:intergenic 50.0%
TGGAGGATGAGTCATGAACG+AGG - Chr1:312558-312577 None:intergenic 50.0%
TGTATCACAAGCCCTTGGTG+GGG + Chr1:313057-313076 MsG0180000010.01.T01:CDS 50.0%
TGTTAACCGGAACGGAAGGA+GGG + Chr1:312984-313003 MsG0180000010.01.T01:CDS 50.0%
TGTTGCAACGAGAGTCTTGC+CGG + Chr1:314333-314352 MsG0180000010.01.T01:CDS 50.0%
TTACTCCAGGGATGGCCAAT+GGG + Chr1:312245-312264 MsG0180000010.01.T01:intron 50.0%
TTCATTTGCAAATGGGGGCC+AGG + Chr1:306559-306578 MsG0180000010.01.T01:CDS 50.0%
TTGAGTTCCCCCAAATGAGG+GGG + Chr1:313816-313835 MsG0180000010.01.T01:intron 50.0%
TTGGCTGGCAGCTAATGCTT+AGG + Chr1:313558-313577 MsG0180000010.01.T01:intron 50.0%
TTTACTCCAGGGATGGCCAA+TGG + Chr1:312244-312263 MsG0180000010.01.T01:intron 50.0%
TTTCATTCCCGTAGGGTGCA+CGG - Chr1:313318-313337 None:intergenic 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG + Chr1:313586-313605 MsG0180000010.01.T01:intron 50.0%
! ACCTTTAGGAGGTTGGAGTC+TGG - Chr1:312609-312628 None:intergenic 50.0%
! AGCATTAGCTGCAAGTTGGC+TGG + Chr1:313543-313562 MsG0180000010.01.T01:intron 50.0%
! AGTCTGGTTCGTCTCTGTTG+TGG - Chr1:312593-312612 None:intergenic 50.0%
! CAGGTTGGCAGTCAGGATAT+GGG + Chr1:312956-312975 MsG0180000010.01.T01:CDS 50.0%
! CAGTCCAAGAGGAGCAGTTT+TGG - Chr1:310990-311009 None:intergenic 50.0%
! CATCAGCACCTTTAGGAGGT+TGG - Chr1:312616-312635 None:intergenic 50.0%
! CTGGTGATTCAGGTTCGACA+CGG + Chr1:310159-310178 MsG0180000010.01.T01:CDS 50.0%
! GCAGGAGTGTGTGTCTGATT+TGG - Chr1:306107-306126 None:intergenic 50.0%
! GCAGGTTGACAGTCAGGATA+TGG + Chr1:313153-313172 MsG0180000010.01.T01:CDS 50.0%
! GGAGGCAGAAGCATGATGTA+AGG + Chr1:312351-312370 MsG0180000010.01.T01:intron 50.0%
! GGCAGAAGCATGATGTAAGG+AGG + Chr1:312354-312373 MsG0180000010.01.T01:intron 50.0%
! TCCATTTTCTAGGCTCCACC+GGG + Chr1:307216-307235 MsG0180000010.01.T01:intron 50.0%
! TCCTATCAGCCACTGGTTGA+AGG - Chr1:314209-314228 None:intergenic 50.0%
! TGGTGATTCAGGTTCGACAC+GGG + Chr1:310160-310179 MsG0180000010.01.T01:CDS 50.0%
! TGTATTGGGGGAGGGTTTTG+GGG - Chr1:313792-313811 None:intergenic 50.0%
!! AAAGGGTTTGGCGTTGGTTG+TGG + Chr1:311839-311858 MsG0180000010.01.T01:intron 50.0%
!! AAGGGTTTGGCGTTGGTTGT+GGG + Chr1:311840-311859 MsG0180000010.01.T01:intron 50.0%
!! AGGAGCACTTCCAACACCAA+CGG - Chr1:309956-309975 None:intergenic 50.0%
!! CCTCCTAAAGGTGCTGATGA+CGG + Chr1:312617-312636 MsG0180000010.01.T01:CDS 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + Chr1:313579-313598 MsG0180000010.01.T01:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - Chr1:313598-313579 None:intergenic 50.0%
!! TAGGAGCATTCATTGTGCCC+TGG - Chr1:306580-306599 None:intergenic 50.0%
!! TGTGGCGGGTTTAATGTCTC+AGG + Chr1:312790-312809 MsG0180000010.01.T01:CDS 50.0%
!! TTGGTGTTGGAAGTGCTCCT+AGG + Chr1:309956-309975 MsG0180000010.01.T01:CDS 50.0%
AACTGGAACGGAAACAGGGC+AGG + Chr1:313186-313205 MsG0180000010.01.T01:CDS 55.0%
AAGCTGCTCGAAGGACGTTC+TGG + Chr1:314512-314531 MsG0180000010.01.T01:CDS 55.0%
ACTGAACACCGTAGTGAGCC+CGG + Chr1:310134-310153 MsG0180000010.01.T01:CDS 55.0%
ACTGGAACGGAAACAGGGCA+GGG + Chr1:313187-313206 MsG0180000010.01.T01:CDS 55.0%
ACTTTAGGCCCCGTTGGTGT+TGG + Chr1:309943-309962 MsG0180000010.01.T01:CDS 55.0%
AGACACACACTCCTGCTACG+GGG + Chr1:306111-306130 MsG0180000010.01.T01:CDS 55.0%
AGAGATACCGCGGAGATGAG+CGG + Chr1:310638-310657 MsG0180000010.01.T01:CDS 55.0%
AGCTGCTCGAAGGACGTTCT+GGG + Chr1:314513-314532 MsG0180000010.01.T01:CDS 55.0%
AGTCAGATTGCCCAGCAGGT+TGG + Chr1:312941-312960 MsG0180000010.01.T01:CDS 55.0%
AGTGGTCGTCGAGGGTAAAG+AGG - Chr1:305465-305484 None:intergenic 55.0%
ATCCTGACTGCCAACCTGCT+GGG - Chr1:312954-312973 None:intergenic 55.0%
ATCGGGTGGTAGCTGTGAAG+TGG - Chr1:310279-310298 None:intergenic 55.0%
ATTTGCCCAACACGGCTACG+AGG - Chr1:306298-306317 None:intergenic 55.0%
CAGACACACACTCCTGCTAC+GGG + Chr1:306110-306129 MsG0180000010.01.T01:CDS 55.0%
CCACTCATACCCAGTCCAAG+AGG - Chr1:311001-311020 None:intergenic 55.0%
CCCATGATACAAGCTCTCGG+AGG + Chr1:313250-313269 MsG0180000010.01.T01:CDS 55.0%
CCCTCCGAGAGCTTGTATCA+TGG - Chr1:313254-313273 None:intergenic 55.0%
CCCTTTCACTGCTAGACAGC+TGG - Chr1:314287-314306 None:intergenic 55.0%
CCGATGCCAGAAGGGTTAGA+TGG - Chr1:310221-310240 None:intergenic 55.0%
CCGTCATCAGCACCTTTAGG+AGG - Chr1:312620-312639 None:intergenic 55.0%
CCTGCCAAAACTGCTCCTCT+TGG + Chr1:310983-311002 MsG0180000010.01.T01:CDS 55.0%
CTGTCAACCTGCTGGGCAAT+CGG - Chr1:313145-313164 None:intergenic 55.0%
GACAATGGAGCTGAATCGGG+TGG - Chr1:310293-310312 None:intergenic 55.0%
GAGCACTTCCAACACCAACG+GGG - Chr1:309954-309973 None:intergenic 55.0%
GCAGCAGAGAATAGTGGTGG+AGG - Chr1:313283-313302 None:intergenic 55.0%
GCTGGAAATCAGGCACCATC+TGG + Chr1:307261-307280 MsG0180000010.01.T01:CDS 55.0%
GCTTCCGGTGTATCCTCAGT+TGG + Chr1:310668-310687 MsG0180000010.01.T01:CDS 55.0%
GGCTCTGCAGCAGAGAATAG+TGG - Chr1:313289-313308 None:intergenic 55.0%
GGGCTGACCATGTTCATCTG+TGG - Chr1:313124-313143 None:intergenic 55.0%
GGGTTAGATGGGAGAGTTGC+TGG - Chr1:310209-310228 None:intergenic 55.0%
GGTTGGAATGCCTGTCCAGA+TGG - Chr1:307279-307298 None:intergenic 55.0%
GTATCACAAGCCCTTGGTGG+GGG + Chr1:313058-313077 MsG0180000010.01.T01:CDS 55.0%
GTGGTGGTCTCGACTTCTCA+AGG + Chr1:313209-313228 MsG0180000010.01.T01:CDS 55.0%
GTTTACAGCCCTAGAGGGGT+TGG - Chr1:313978-313997 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG + Chr1:313585-313604 MsG0180000010.01.T01:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - Chr1:313604-313585 None:intergenic 55.0%
TATCCTGACTGCCAACCTGC+TGG - Chr1:312955-312974 None:intergenic 55.0%
TGCACTAGCTGTCTCACTGC+CGG - Chr1:306138-306157 None:intergenic 55.0%
TGGAGGATTTCCCCCACCAA+GGG - Chr1:313071-313090 None:intergenic 55.0%
TGTCAACCTGCTGGGCAATC+GGG - Chr1:313144-313163 None:intergenic 55.0%
TGTCAGTCAGATTGCCCAGC+AGG + Chr1:312937-312956 MsG0180000010.01.T01:CDS 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - Chr1:313603-313584 None:intergenic 55.0%
TTCATTCCCGTAGGGTGCAC+GGG - Chr1:313317-313336 None:intergenic 55.0%
TTGCAAACACTCGGGGGTCA+AGG + Chr1:312698-312717 MsG0180000010.01.T01:CDS 55.0%
TTGGCGTGTTGTGCCCCAAA+TGG + Chr1:314630-314649 MsG0180000010.01.T01:three_prime_UTR 55.0%
! ACGGGAGTTGACTCACCTGA+TGG + Chr1:312863-312882 MsG0180000010.01.T01:CDS 55.0%
! CCACTGGTTGAAGGTCAACC+TGG - Chr1:314200-314219 None:intergenic 55.0%
! CCAGGTTGACCTTCAACCAG+TGG + Chr1:314197-314216 MsG0180000010.01.T01:intron 55.0%
! CCATTTTCTAGGCTCCACCG+GGG + Chr1:307217-307236 MsG0180000010.01.T01:intron 55.0%
! CCTCTTGGACTGGGTATGAG+TGG + Chr1:310998-311017 MsG0180000010.01.T01:CDS 55.0%
! CGTTGGTTGTGGGGATGACA+TGG + Chr1:311850-311869 MsG0180000010.01.T01:intron 55.0%
! GAGTTTGGAGGGGAGGGTTT+TGG - Chr1:313927-313946 None:intergenic 55.0%
! GCAGGTTGGCAGTCAGGATA+TGG + Chr1:312955-312974 MsG0180000010.01.T01:CDS 55.0%
! GGAGCACTTCCAACACCAAC+GGG - Chr1:309955-309974 None:intergenic 55.0%
! GGTGATTCAGGTTCGACACG+GGG + Chr1:310161-310180 MsG0180000010.01.T01:CDS 55.0%
! TTGAGAGGAGAGGGCTTTGG+AGG - Chr1:313868-313887 None:intergenic 55.0%
!! AGGGTTTGGCGTTGGTTGTG+GGG + Chr1:311841-311860 MsG0180000010.01.T01:intron 55.0%
!! ATTGGTGCAAGAGAGGCACC+TGG - Chr1:310068-310087 None:intergenic 55.0%
!! CCAAGAGGAGCAGTTTTGGC+AGG - Chr1:310986-311005 None:intergenic 55.0%
!! CCCTAGAGGGGTTGGTTTAC+AGG - Chr1:313970-313989 None:intergenic 55.0%
!! GTATTGGGGGAGGGTTTTGG+GGG - Chr1:313791-313810 None:intergenic 55.0%
!!! AGGGTTTTGGGGGGTTATGG+AGG - Chr1:313781-313800 None:intergenic 55.0%
!!! GGGTTTTGGGGGGTTATGGA+GGG - Chr1:313780-313799 None:intergenic 55.0%
!!! TATTGGGGGAGGGTTTTGGG+GGG - Chr1:313790-313809 None:intergenic 55.0%
CACCAGAACCGGGCTCACTA+CGG - Chr1:310145-310164 None:intergenic 60.0%
CAGAAACCCGTGCACCCTAC+GGG + Chr1:313308-313327 MsG0180000010.01.T01:CDS 60.0%
CAGCAGCTCCGATGCCAGAA+GGG - Chr1:310229-310248 None:intergenic 60.0%
CCAACGGGGCCTAAAGTTGC+AGG - Chr1:309940-309959 None:intergenic 60.0%
CCACCGGGGAACGAAACTGA+AGG + Chr1:307231-307250 MsG0180000010.01.T01:CDS 60.0%
CCAGAAACCCGTGCACCCTA+CGG + Chr1:313307-313326 MsG0180000010.01.T01:CDS 60.0%
CCCCGGTGGAGCCTAGAAAA+TGG - Chr1:307220-307239 None:intergenic 60.0%
CCTGCAACTTTAGGCCCCGT+TGG + Chr1:309937-309956 MsG0180000010.01.T01:CDS 60.0%
CCTTCAGTTTCGTTCCCCGG+TGG - Chr1:307234-307253 None:intergenic 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + Chr1:313591-313610 MsG0180000010.01.T01:intron 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG + Chr1:313590-313609 MsG0180000010.01.T01:intron 60.0%
GTGCTCCTCGTAGCCGTGTT+GGG + Chr1:306290-306309 MsG0180000010.01.T01:CDS 60.0%
GTGGAGGATTTCCCCCACCA+AGG - Chr1:313072-313091 None:intergenic 60.0%
TGTCTCCCATTGGCCATCCC+TGG - Chr1:312253-312272 None:intergenic 60.0%
! CGGGGGAGTGCAAATGCCTT+AGG - Chr1:306180-306199 None:intergenic 60.0%
! GAGCCCGGTTCTGGTGATTC+AGG + Chr1:310149-310168 MsG0180000010.01.T01:CDS 60.0%
! TGACTACCGCTGGTGGGCAA+GGG - Chr1:312764-312783 None:intergenic 60.0%
! TGCCCAGCAGGTTGACAGTC+AGG + Chr1:313147-313166 MsG0180000010.01.T01:CDS 60.0%
! TGCTCGAAGGACGTTCTGGG+AGG + Chr1:314516-314535 MsG0180000010.01.T01:CDS 60.0%
!! GCTCGAAGGACGTTCTGGGA+GGG + Chr1:314517-314536 MsG0180000010.01.T01:CDS 60.0%
!! GGGGTGGTGTTGACCTCTCA+AGG + Chr1:313011-313030 MsG0180000010.01.T01:CDS 60.0%
!!! GGGAGGGTTTTGGGGGGTTA+TGG - Chr1:313784-313803 None:intergenic 60.0%
ACGGAAACAGGGCAGGGTGG+TGG + Chr1:313193-313212 MsG0180000010.01.T01:CDS 65.0%
ATGAGCGGACGTGGGGCTTC+CGG + Chr1:310653-310672 MsG0180000010.01.T01:CDS 65.0%
CACACTCCTGCTACGGGGTC+CGG + Chr1:306116-306135 MsG0180000010.01.T01:CDS 65.0%
CACCGTAGTGAGCCCGGTTC+TGG + Chr1:310140-310159 MsG0180000010.01.T01:CDS 65.0%
CCAGCAGCTCCGATGCCAGA+AGG - Chr1:310230-310249 None:intergenic 65.0%
CCGTAGGGTGCACGGGTTTC+TGG - Chr1:313310-313329 None:intergenic 65.0%
CCTCTGCCCTCCTTCCGTTC+CGG - Chr1:312993-313012 None:intergenic 65.0%
CGGAACGGAAGGAGGGCAGA+GGG + Chr1:312991-313010 MsG0180000010.01.T01:CDS 65.0%
GAAGGGAGGGGAGGGCTTTG+GGG + Chr1:313603-313622 MsG0180000010.01.T01:intron 65.0%
GCACTCCCCCGTTCGATCCA+GGG + Chr1:306189-306208 MsG0180000010.01.T01:intron 65.0%
GCAGGACGCATGGAGCGAGA+GGG + Chr1:308544-308563 MsG0180000010.01.T01:CDS 65.0%
GGAACGGAAACAGGGCAGGG+TGG + Chr1:313190-313209 MsG0180000010.01.T01:CDS 65.0%
GGAACGGAAGGAGGGCAGAG+GGG + Chr1:312992-313011 MsG0180000010.01.T01:CDS 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG + Chr1:313602-313621 MsG0180000010.01.T01:intron 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG + Chr1:313589-313608 MsG0180000010.01.T01:intron 65.0%
GGTATGGCTCCCGCAGCCAT+AGG - Chr1:307324-307343 None:intergenic 65.0%
GGTGCTCCTCGTAGCCGTGT+TGG + Chr1:306289-306308 MsG0180000010.01.T01:CDS 65.0%
GGTGGGGTGAAGGGAGACCA+AGG + Chr1:311698-311717 MsG0180000010.01.T01:intron 65.0%
GTGGGGGATCAGGGTGGTGA+AGG + Chr1:306349-306368 MsG0180000010.01.T01:CDS 65.0%
TGCACTCCCCCGTTCGATCC+AGG + Chr1:306188-306207 MsG0180000010.01.T01:intron 65.0%
TGCAGGACGCATGGAGCGAG+AGG + Chr1:308543-308562 MsG0180000010.01.T01:CDS 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG + Chr1:313595-313614 MsG0180000010.01.T01:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG + Chr1:313594-313613 MsG0180000010.01.T01:intron 65.0%
! AAGGGAGGGGAGGGCTTTGG+GGG + Chr1:313604-313623 MsG0180000010.01.T01:intron 65.0%
! CCTTCTGGCATCGGAGCTGC+TGG + Chr1:310227-310246 MsG0180000010.01.T01:CDS 65.0%
! CTGACTACCGCTGGTGGGCA+AGG - Chr1:312765-312784 None:intergenic 65.0%
! TGCCCAGCAGGTTGGCAGTC+AGG + Chr1:312949-312968 MsG0180000010.01.T01:CDS 65.0%
!! GTGCAAGAGAGGCACCTGGC+AGG - Chr1:310064-310083 None:intergenic 65.0%
ACCGCGGAGATGAGCGGACG+TGG + Chr1:310644-310663 MsG0180000010.01.T01:CDS 70.0%
ACGGAAGGAGGGCAGAGGGG+TGG + Chr1:312995-313014 MsG0180000010.01.T01:CDS 70.0%
CAGCGACCCTTGCCCACCAG+CGG + Chr1:312755-312774 MsG0180000010.01.T01:CDS 70.0%
CCCACGTCCGCTCATCTCCG+CGG - Chr1:310648-310667 None:intergenic 70.0%
CCGCGGAGATGAGCGGACGT+GGG + Chr1:310645-310664 MsG0180000010.01.T01:CDS 70.0%
CCGGAACGGAAGGAGGGCAG+AGG + Chr1:312990-313009 MsG0180000010.01.T01:CDS 70.0%
CGCGGAGATGAGCGGACGTG+GGG + Chr1:310646-310665 MsG0180000010.01.T01:CDS 70.0%
GGGAAGGGAGGGGAGGGCTT+TGG + Chr1:313601-313620 MsG0180000010.01.T01:intron 70.0%
GGTCAGCCCGATTGCCCAGC+AGG + Chr1:313135-313154 MsG0180000010.01.T01:CDS 70.0%
TCACTGCCGGACCCCGTAGC+AGG - Chr1:306125-306144 None:intergenic 70.0%
! CTGGTGGGCAAGGGTCGCTG+AGG - Chr1:312755-312774 None:intergenic 70.0%
!! AGGGAGGGGAGGGCTTTGGG+GGG + Chr1:313605-313624 MsG0180000010.01.T01:intron 70.0%
!! AGGGGAGGGCTTTGGGGGGT+TGG + Chr1:313609-313628 MsG0180000010.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 305252 314878 305252 ID=MsG0180000010.01;Name=MsG0180000010.01
Chr1 mRNA 305252 314878 305252 ID=MsG0180000010.01.T01;Parent=MsG0180000010.01;Name=MsG0180000010.01.T01;_AED=0.32;_eAED=0.32;_QI=226|0.94|0.94|1|0.94|0.88|18|328|989
Chr1 exon 314479 314878 314479 ID=MsG0180000010.01.T01:exon:7969;Parent=MsG0180000010.01.T01
Chr1 exon 314201 314356 314201 ID=MsG0180000010.01.T01:exon:7968;Parent=MsG0180000010.01.T01
Chr1 exon 312599 313360 312599 ID=MsG0180000010.01.T01:exon:7967;Parent=MsG0180000010.01.T01
Chr1 exon 310806 311033 310806 ID=MsG0180000010.01.T01:exon:7966;Parent=MsG0180000010.01.T01
Chr1 exon 310567 310718 310567 ID=MsG0180000010.01.T01:exon:7965;Parent=MsG0180000010.01.T01
Chr1 exon 310069 310392 310069 ID=MsG0180000010.01.T01:exon:7964;Parent=MsG0180000010.01.T01
Chr1 exon 309883 310003 309883 ID=MsG0180000010.01.T01:exon:7963;Parent=MsG0180000010.01.T01
Chr1 exon 308784 308855 308784 ID=MsG0180000010.01.T01:exon:7962;Parent=MsG0180000010.01.T01
Chr1 exon 308538 308702 308538 ID=MsG0180000010.01.T01:exon:7961;Parent=MsG0180000010.01.T01
Chr1 exon 307600 307751 307600 ID=MsG0180000010.01.T01:exon:7960;Parent=MsG0180000010.01.T01
Chr1 exon 307457 307526 307457 ID=MsG0180000010.01.T01:exon:7959;Parent=MsG0180000010.01.T01
Chr1 exon 307228 307362 307228 ID=MsG0180000010.01.T01:exon:7958;Parent=MsG0180000010.01.T01
Chr1 exon 306539 306619 306539 ID=MsG0180000010.01.T01:exon:7957;Parent=MsG0180000010.01.T01
Chr1 exon 306272 306393 306272 ID=MsG0180000010.01.T01:exon:7956;Parent=MsG0180000010.01.T01
Chr1 exon 306063 306170 306063 ID=MsG0180000010.01.T01:exon:7955;Parent=MsG0180000010.01.T01
Chr1 exon 305845 305962 305845 ID=MsG0180000010.01.T01:exon:7954;Parent=MsG0180000010.01.T01
Chr1 exon 305573 305731 305573 ID=MsG0180000010.01.T01:exon:7953;Parent=MsG0180000010.01.T01
Chr1 exon 305252 305450 305252 ID=MsG0180000010.01.T01:exon:7952;Parent=MsG0180000010.01.T01
Chr1 five_prime_UTR 305252 305450 305252 ID=MsG0180000010.01.T01:five_prime_utr;Parent=MsG0180000010.01.T01
Chr1 five_prime_UTR 305573 305599 305573 ID=MsG0180000010.01.T01:five_prime_utr;Parent=MsG0180000010.01.T01
Chr1 CDS 305600 305731 305600 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 305845 305962 305845 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 306063 306170 306063 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 306272 306393 306272 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 306539 306619 306539 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 307228 307362 307228 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 307457 307526 307457 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 307600 307751 307600 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 308538 308702 308538 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 308784 308855 308784 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 309883 310003 309883 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 310069 310392 310069 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 310567 310718 310567 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 310806 311033 310806 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 312599 313360 312599 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 314201 314356 314201 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 CDS 314479 314550 314479 ID=MsG0180000010.01.T01:cds;Parent=MsG0180000010.01.T01
Chr1 three_prime_UTR 314551 314878 314551 ID=MsG0180000010.01.T01:three_prime_utr;Parent=MsG0180000010.01.T01
Gene Sequence

>MsG0180000010.01.T01

ATGGCGAATCAATCTTCAAATGAAGGCAGCAGCTCCAGTACCAATGTTTCTGAACAACAAGATTCAACTCTTCTTCATCTCAATATCAAGACTCTTGATTCGAGAATCTACACTTTTCAAGTCGACAAAAATATGCCCGTTTCGCTGTTCAAAGACAAAATTGCAACTGAAGTAGGTTTACCAGTTAATCAGCAACGACTCATTTTTAGAGGAAAAGTCTTAAAGGATGAACACCTTCTTTCTCACTATCATGTTGAGAATGGCCATACATTGCATTTGGTTGAAAGACAGCCAAATCAGACACACACTCCTGCTACGGGGTCCGGCAGTGAGACAGCTAGTGCAAATAGTAACCGAGGAAACAATGTTGGATCAGGTGCTCCTCGTAGCCGTGTTGGGCAAATTTCACACAGTGTGGTTCTTGGGACTATTAATGTGGGGGATCAGGGTGGTGAAGGCATTTCTCAAGACATTACTCGGGTTATCGGGGCAGTTTTGAATTCATTTGCAAATGGGGGCCAGGGCACAATGAATGCTCCTAATTCCGCACAAACTTCTTCGGCTCCACCGGGGAACGAAACTGAAGGAAATCAAGCTGGAAATCAGGCACCATCTGGACAGGCATTCCAACCGTTTCCTCATGTTGTTCAGATTCCTATGGCTGCGGGAGCCATACCTGTTCCTTCTTTCAATGCACCAATTCCCCATTCCCTCAACACACTGTATGTGTTCATAAATCGCATGGAACATGCACTCTCTCAAAATGGTTATGGGCCAAATATATCTTCAACTAACCTTGGAGATCAACGAGCAGAATTGCCTTCTAATACACAAGGGTTGCCAACACTTGAAGCACTAACCACTGTATTGCATCGTACAGAACAGTTGCTTAGTGGTCAAGCTGTTTCTGCGCTATCTCATATTGCAGGACGCATGGAGCGAGAGGGAACTTCTGCTGATCTAGGTGTAAGAGGTCAAATACAGTCAGAGTCAGTACAAATAGGAATTGCTATGCAGCATTTGGGTGCACTTCTACTTGAACTGGGCCGAACTATGTTAACACTGCGAATGGGACAGTCTTCGGCAGAATCTGTTGTTAATGCTGGACCAGCAGTTTATATTTCTCCATCAGGGCCAAATCCTATAATGGTGCAGCCATTTCCACTTCAAACAAGCTCCTTGTTTGGCGGTCCACTTTCTTCTTCAACTCCTGCAACTTTAGGCCCCGTTGGTGTTGGAAGTGCTCCTAGGAACGTAAACATTCACATACATGCTGGTGCCTCTCTTGCACCAATTGTTTCAGCAATTGGCTCTAGACCAAACAATGGGGAAGGGACAAGGACTGAACACCGTAGTGAGCCCGGTTCTGGTGATTCAGGTTCGACACGGGGTTTACCTGTTAGAAATGTCATACCAGCAACTCTCCCATCTAACCCTTCTGGCATCGGAGCTGCTGGCAGCACACCATCTGGATTCAGTATCTCCACTTCACAGCTACCACCCGATTCAGCTCCATTGTCATCTGTTTTAGCTGAAATCCAGTCACACCTTAGAAACTCTGTTGGTAATATGCAAGGAGACAGCACAATTTTGTCAGGTGGCCAAATGCAATCAACTAGCAGGGACTTGTCTTCTGGATCTGAACCAAGACCTGAACAGGTAAATGAACAGAGAGATACCGCGGAGATGAGCGGACGTGGGGCTTCCGGTGTATCCTCAGTTGGTTGCACTTCTGAAAGTGGAGTAGAGAAGACCCAAACTGAGGCAATCAAAACCTGTAGTAATGATGAGAGAGATGTTTTGGTCGACAAATTTGTTTCAAGTTCTTCCAATCAAGATTTACAAAGTTGTTCTAGTGGAGAAGCAGCTGTAAAATCAGAAAAAGTACAGGATGCTCCATCTTCAAGTGAAAGGCGAGATGTAACTGAACCTGCCAAAACTGCTCCTCTTGGACTGGGTATGAGTGGTTTAGAGCGTAAGAGACGAACCAGACTCCAACCTCCTAAAGGTGCTGATGACGGATCCTCCAGTTCTTTCATCAATCAAAGTCAGGAAACCAGGACAGATGGTCAAAATATATTGCAAACACTCGGGGGTCAAGGTTCTGCTGTTAATTTGATAAATGCTGATAGGCCTCAGCGACCCTTGCCCACCAGCGGTAGTCAGATTGATGTGGCGGGTTTAATGTCTCAGGCTCTAAATAGTCCTGCTTTGAATGGTTTGTTGGAAGGGTTTTCACAGCAAACGGGAGTTGACTCACCTGATGGCTTAAGGAGCATGTTGCAACAGTTCACACAAAGCCCGCAGATGATGAACACTGTCAGTCAGATTGCCCAGCAGGTTGGCAGTCAGGATATGGGGAATATGTTAACCGGAACGGAAGGAGGGCAGAGGGGTGGTGTTGACCTCTCAAGGATGCTTCAACAGATGATGCCCATTGTATCACAAGCCCTTGGTGGGGGAAATCCTCCACCACTATTCTCTGCTACAGAACCAGAAAGCCCACAGATGAACATGGTCAGCCCGATTGCCCAGCAGGTTGACAGTCAGGATATGGGGAATATGCTAACTGGAACGGAAACAGGGCAGGGTGGTGGTCTCGACTTCTCAAGGATGTTTCAACAGATGATGCCCATGATACAAGCTCTCGGAGGGGGAAATCCTCCACCACTATTCTCTGCTGCAGAGCCAGAAACCCGTGCACCCTACGGGAATGAAAATTCTGATAATCGAAGTTTGCAGGTTGACCTTCAACCAGTGGCTGATAGGATTGATCGCCTGAGTCCACCTACAGATATCTTCCGTGCTGTAGCTGAAAATGCAGTCCAGCTGTCTAGCAGTGAAAGGGCTTCTGATGATCTTTTGGATGAGTTATGTTGCAACGAGAGTCTTGCCGGCGAATATTTGGAGATGTTGCGATCTGATGTAAGTAAGCTGCTCGAAGGACGTTCTGGGAGGGACAAGTCCTAA
Protein sequence

>MsG0180000010.01.T01

MANQSSNEGSSSSTNVSEQQDSTLLHLNIKTLDSRIYTFQVDKNMPVSLFKDKIATEVGLPVNQQRLIFRGKVLKDEHLLSHYHVENGHTLHLVERQPNQTHTPATGSGSETASANSNRGNNVGSGAPRSRVGQISHSVVLGTINVGDQGGEGISQDITRVIGAVLNSFANGGQGTMNAPNSAQTSSAPPGNETEGNQAGNQAPSGQAFQPFPHVVQIPMAAGAIPVPSFNAPIPHSLNTLYVFINRMEHALSQNGYGPNISSTNLGDQRAELPSNTQGLPTLEALTTVLHRTEQLLSGQAVSALSHIAGRMEREGTSADLGVRGQIQSESVQIGIAMQHLGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGGPLSSSTPATLGPVGVGSAPRNVNIHIHAGASLAPIVSAIGSRPNNGEGTRTEHRSEPGSGDSGSTRGLPVRNVIPATLPSNPSGIGAAGSTPSGFSISTSQLPPDSAPLSSVLAEIQSHLRNSVGNMQGDSTILSGGQMQSTSRDLSSGSEPRPEQVNEQRDTAEMSGRGASGVSSVGCTSESGVEKTQTEAIKTCSNDERDVLVDKFVSSSSNQDLQSCSSGEAAVKSEKVQDAPSSSERRDVTEPAKTAPLGLGMSGLERKRRTRLQPPKGADDGSSSSFINQSQETRTDGQNILQTLGGQGSAVNLINADRPQRPLPTSGSQIDVAGLMSQALNSPALNGLLEGFSQQTGVDSPDGLRSMLQQFTQSPQMMNTVSQIAQQVGSQDMGNMLTGTEGGQRGGVDLSRMLQQMMPIVSQALGGGNPPPLFSATEPESPQMNMVSPIAQQVDSQDMGNMLTGTETGQGGGLDFSRMFQQMMPMIQALGGGNPPPLFSAAEPETRAPYGNENSDNRSLQVDLQPVADRIDRLSPPTDIFRAVAENAVQLSSSERASDDLLDELCCNESLAGEYLEMLRSDVSKLLEGRSGRDKS*