Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014910 | RHN78432.1 | 67.480 | 369 | 19 | 5 | 1 | 321 | 1 | 316 | 8.12e-130 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0014910 | 0.802398 | 5.716252e-49 | -8.615850e-47 |
| Msa0014910 | Msa0027540 | 0.803102 | 4.092471e-49 | -8.615850e-47 |
| Msa0014910 | Msa0135980 | 0.802914 | 4.475499e-49 | -8.615850e-47 |
| Msa0014910 | Msa0146470 | 0.801750 | 7.770252e-49 | -8.615850e-47 |
| Msa0014910 | Msa0223280 | 0.803468 | 3.436509e-49 | -8.615850e-47 |
| Msa0014910 | Msa0259980 | 0.807214 | 5.638356e-50 | -8.615850e-47 |
| Msa0014910 | Msa0319210 | 0.802612 | 5.165739e-49 | -8.615850e-47 |
| Msa0014910 | Msa0339860 | 0.806978 | 6.325570e-50 | -8.615850e-47 |
| Msa0014910 | Msa0581460 | 0.800897 | 1.161449e-48 | -8.615850e-47 |
| Msa0014910 | Msa0642650 | 0.805655 | 1.202070e-49 | -8.615850e-47 |
| Msa0014910 | Msa0717090 | 0.811217 | 7.816604e-51 | -8.615850e-47 |
| Msa0014910 | Msa0803130 | 0.809966 | 1.456931e-50 | -8.615850e-47 |
| Msa0014910 | Msa0841490 | 0.806216 | 9.160451e-50 | -8.615850e-47 |
| Msa0014910 | Msa0890250 | 0.800660 | 1.298351e-48 | -8.615850e-47 |
| Msa0014910 | Msa0965960 | 0.801510 | 8.704904e-49 | -8.615850e-47 |
| Msa0014910 | Msa1046870 | 0.801930 | 7.135986e-49 | -8.615850e-47 |
| Msa0014910 | Msa1159350 | 0.802043 | 6.763662e-49 | -8.615850e-47 |
| Msa0014910 | Msa1365870 | 0.803076 | 4.141859e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014910 | MtrunA17_Chr1g0165431 | 67.480 | 369 | 19 | 5 | 1 | 321 | 1 | 316 | 7.46e-134 | 384 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0014910 | AT5G08540.1 | 46.505 | 372 | 105 | 4 | 8 | 328 | 1 | 329 | 4.34e-99 | 296 |
Find 83 sgRNAs with CRISPR-Local
Find 695 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAACAATTGAATTTAAAA+TGG | 0.160777 | 1_1:-23912319 | None:intergenic |
| AAATATCAAGGATGGGTAAA+TGG | 0.222760 | 1_1:+23908868 | Msa0014910:CDS |
| AATTTAAAATGGGGAGAAAA+TGG | 0.262527 | 1_1:-23912308 | None:intergenic |
| ATTCATATCCAGACAGGTTT+TGG | 0.271336 | 1_1:+23905022 | Msa0014910:intron |
| ATCATCTCGAATCCAAAATA+TGG | 0.278099 | 1_1:+23912033 | Msa0014910:three_prime_UTR |
| CTAGCTGTTCAGGCTCTCTT+TGG | 0.292669 | 1_1:+23907415 | Msa0014910:CDS |
| AGTGCTGTAGAGACACATTT+TGG | 0.307195 | 1_1:+23912227 | Msa0014910:three_prime_UTR |
| CAAGAGAAAACTAGCTGTTC+AGG | 0.334891 | 1_1:+23907405 | Msa0014910:CDS |
| GACTGAAGTGGGGAGTATTC+TGG | 0.363347 | 1_1:+23908903 | Msa0014910:CDS |
| TGCGTACTTCAGCTTTCTCT+TGG | 0.365358 | 1_1:+23912116 | Msa0014910:three_prime_UTR |
| TGGCATATCACTTTAAGAAT+AGG | 0.365544 | 1_1:+23912283 | Msa0014910:three_prime_UTR |
| ATTAAATCAGCTACAACATC+AGG | 0.370866 | 1_1:-23905103 | None:intergenic |
| TTAGTTGTCAAGGAAATCTT+CGG | 0.373589 | 1_1:+23911462 | Msa0014910:CDS |
| GCTGTTCCGCTTGGTTATCT+AGG | 0.381767 | 1_1:+23903579 | Msa0014910:CDS |
| CCTGATTTATTCATTACAAT+AGG | 0.384185 | 1_1:-23907364 | None:intergenic |
| TTTGTTTGGATTGATTATTA+GGG | 0.384414 | 1_1:-23903413 | None:intergenic |
| ATAACAATTGAATTTAAAAT+GGG | 0.390267 | 1_1:-23912318 | None:intergenic |
| TAAATCAGGTTATACTGAAA+AGG | 0.391414 | 1_1:+23907378 | Msa0014910:CDS |
| GGATACTATGTGTGTTCGTT+TGG | 0.391589 | 1_1:+23912263 | Msa0014910:three_prime_UTR |
| CCATCTTCTCAAGCGAATCT+AGG | 0.413021 | 1_1:-23911869 | None:intergenic |
| TAGTTGTCAAGGAAATCTTC+GGG | 0.415832 | 1_1:+23911463 | Msa0014910:CDS |
| AATATCAAGGATGGGTAAAT+GGG | 0.419110 | 1_1:+23908869 | Msa0014910:CDS |
| GCCAAGAAGGGTACTACAAA+AGG | 0.429369 | 1_1:+23908928 | Msa0014910:CDS |
| TCAGTTACACAAGCGATTCC+TGG | 0.429919 | 1_1:+23903519 | Msa0014910:CDS |
| CCTAGATTCGCTTGAGAAGA+TGG | 0.435482 | 1_1:+23911869 | Msa0014910:CDS |
| TAGCTGATTTAATTCAACTA+AGG | 0.440271 | 1_1:+23905113 | Msa0014910:CDS |
| AAATCAGGTTATACTGAAAA+GGG | 0.451512 | 1_1:+23907379 | Msa0014910:CDS |
| CCTATTGTAATGAATAAATC+AGG | 0.452441 | 1_1:+23907364 | Msa0014910:CDS |
| ACAATTCCAATGTGTAGAGC+AGG | 0.459640 | 1_1:+23912063 | Msa0014910:three_prime_UTR |
| CTTGACCTTGTTGAATTCAC+CGG | 0.459910 | 1_1:+23903495 | Msa0014910:CDS |
| GTTTCTCATTCAGAGCATAT+CGG | 0.471136 | 1_1:-23905072 | None:intergenic |
| ATACTCCCCACTTCAGTCCT+TGG | 0.472363 | 1_1:-23908898 | None:intergenic |
| GAAGATTTCCTTGACAACTA+AGG | 0.473890 | 1_1:-23911460 | None:intergenic |
| GAAAAGGCCAAGGACTGAAG+TGG | 0.480125 | 1_1:+23908891 | Msa0014910:CDS |
| GAAGAAGAAGTAAAAGCCAT+TGG | 0.480454 | 1_1:-23903213 | None:intergenic |
| TGCTGTTAAAGACTGGCCTA+TGG | 0.481243 | 1_1:-23912173 | None:intergenic |
| GCTACAACATCAGGGTTGAA+TGG | 0.484197 | 1_1:-23905094 | None:intergenic |
| TGGATTCTCGCTGTTCCGCT+TGG | 0.485199 | 1_1:+23903570 | Msa0014910:CDS |
| GAGTATTCTGGCCGCCAAGA+AGG | 0.490556 | 1_1:+23908915 | Msa0014910:CDS |
| TTGTAGAACAATATATCCAA+TGG | 0.493116 | 1_1:-23908952 | None:intergenic |
| GAGAATCCACGGCAATGAAG+TGG | 0.498552 | 1_1:-23903556 | None:intergenic |
| TGTAGAACAATATATCCAAT+GGG | 0.498861 | 1_1:-23908951 | None:intergenic |
| AATCGCTTGTGTAACTGAAC+CGG | 0.501130 | 1_1:-23903514 | None:intergenic |
| CAAACAATCTTCTCATGACT+TGG | 0.504893 | 1_1:+23911989 | Msa0014910:three_prime_UTR |
| AAAGAACGGTTGAGATTGAA+AGG | 0.511231 | 1_1:-23903286 | None:intergenic |
| AAGGATGGGTAAATGGGAAA+AGG | 0.513116 | 1_1:+23908875 | Msa0014910:CDS |
| CGAAGAATTGTGCGAGACAA+AGG | 0.514186 | 1_1:+23905190 | Msa0014910:CDS |
| GAAGAAGATAAGAATAAGAG+TGG | 0.515773 | 1_1:-23903333 | None:intergenic |
| TAGTGAGGCTTCATGATGCT+TGG | 0.517154 | 1_1:+23911917 | Msa0014910:exon |
| AGAACGGTTGAGATTGAAAG+GGG | 0.520327 | 1_1:-23903284 | None:intergenic |
| AAAAGGCCAAGGACTGAAGT+GGG | 0.523790 | 1_1:+23908892 | Msa0014910:CDS |
| CACTACTTCAAGAAATATCA+AGG | 0.526801 | 1_1:+23908856 | Msa0014910:CDS |
| ACTTCAAGAAATATCAAGGA+TGG | 0.534023 | 1_1:+23908860 | Msa0014910:CDS |
| AAGTTGAAGAAGAACTTCCA+TGG | 0.535057 | 1_1:+23903457 | Msa0014910:CDS |
| AGCGGAACAGCGAGAATCCA+CGG | 0.540855 | 1_1:-23903567 | None:intergenic |
| AGATAGCTCCTTAGTTGTCA+AGG | 0.541338 | 1_1:+23911452 | Msa0014910:CDS |
| GTGGGACCCACTCGTGGACC+AGG | 0.541794 | 1_1:-23903537 | None:intergenic |
| TGTTCAGGCTCTCTTTGGAA+AGG | 0.545946 | 1_1:+23907420 | Msa0014910:CDS |
| TGGGTCCCACTTCATTGCCG+TGG | 0.547911 | 1_1:+23903550 | Msa0014910:CDS |
| GCTGTTAAAGACTGGCCTAT+GGG | 0.560568 | 1_1:-23912172 | None:intergenic |
| ACATCAATGCTGTTAAAGAC+TGG | 0.564334 | 1_1:-23912180 | None:intergenic |
| ATACACACAACTTCTGAAGC+TGG | 0.564898 | 1_1:+23911843 | Msa0014910:CDS |
| GGGTACTACAAAAGGCCCAT+TGG | 0.568918 | 1_1:+23908936 | Msa0014910:CDS |
| GGGTAAATGGGAAAAGGCCA+AGG | 0.576976 | 1_1:+23908881 | Msa0014910:CDS |
| AGTATTCTGGCCGCCAAGAA+GGG | 0.577513 | 1_1:+23908916 | Msa0014910:CDS |
| AAGAACGGTTGAGATTGAAA+GGG | 0.579968 | 1_1:-23903285 | None:intergenic |
| AGGGTTAGTGTTGTTCGAAG+AGG | 0.584220 | 1_1:-23903394 | None:intergenic |
| CTTCAAGAAATATCAAGGAT+GGG | 0.584671 | 1_1:+23908861 | Msa0014910:CDS |
| CAATTCCAATGTGTAGAGCA+GGG | 0.586961 | 1_1:+23912064 | Msa0014910:three_prime_UTR |
| AGAATCCACGGCAATGAAGT+GGG | 0.599412 | 1_1:-23903555 | None:intergenic |
| AGCGATTCCTGGTCCACGAG+TGG | 0.601562 | 1_1:+23903530 | Msa0014910:CDS |
| AATGAAGTGGGACCCACTCG+TGG | 0.613344 | 1_1:-23903543 | None:intergenic |
| GCGATTCCTGGTCCACGAGT+GGG | 0.629764 | 1_1:+23903531 | Msa0014910:CDS |
| TGATGAAGATGCTGAAGCAA+CGG | 0.636890 | 1_1:-23903367 | None:intergenic |
| TAACAGCATTGATGTTACTG+TGG | 0.648606 | 1_1:+23912188 | Msa0014910:three_prime_UTR |
| TAACAATTGAATTTAAAATG+GGG | 0.653781 | 1_1:-23912317 | None:intergenic |
| AAAGGTCTTCTATCTATCTG+AGG | 0.657891 | 1_1:+23907438 | Msa0014910:CDS |
| TTAAATCAGCTACAACATCA+GGG | 0.663431 | 1_1:-23905102 | None:intergenic |
| CTGAACCGGTGAATTCAACA+AGG | 0.671168 | 1_1:-23903500 | None:intergenic |
| AGATTCAGAAGATTCTAGTG+AGG | 0.671608 | 1_1:+23911902 | Msa0014910:CDS |
| AAAGGCCAAGGACTGAAGTG+GGG | 0.683039 | 1_1:+23908893 | Msa0014910:CDS |
| AGTTGTCAAGGAAATCTTCG+GGG | 0.716074 | 1_1:+23911464 | Msa0014910:CDS |
| GTAAGACCTAGATAACCAAG+CGG | 0.723907 | 1_1:-23903585 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGATTTTTAACAAATATTT+AGG | - | chr1_1:23904372-23904391 | None:intergenic | 10.0% |
| !!! | CACTTTTATTTTTTAAATTA+CGG | + | chr1_1:23905690-23905709 | Msa0014910:intron | 10.0% |
| !!! | TAAAACAATTTTTAAATCTA+AGG | + | chr1_1:23906197-23906216 | Msa0014910:intron | 10.0% |
| !!! | ACTATTTTAAAAAAATAGTT+TGG | - | chr1_1:23906226-23906245 | None:intergenic | 10.0% |
| !!! | TATGTTAAATAAACTTTTTA+AGG | - | chr1_1:23907471-23907490 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTACCTAAA+TGG | + | chr1_1:23909051-23909070 | Msa0014910:intron | 10.0% |
| !! | AACTAAATTATTAATGTAAA+AGG | - | chr1_1:23911280-23911299 | None:intergenic | 10.0% |
| !! | AAAGTAAAAATAAATCTAAC+AGG | + | chr1_1:23906285-23906304 | Msa0014910:intron | 15.0% |
| !!! | TTGTTTGTTTTTGATATATA+AGG | + | chr1_1:23906369-23906388 | Msa0014910:intron | 15.0% |
| !!! | CAAATTCTGTTTTATTTTAA+TGG | - | chr1_1:23906503-23906522 | None:intergenic | 15.0% |
| !!! | AAAATAAAACAGAATTTGTT+TGG | + | chr1_1:23906505-23906524 | Msa0014910:intron | 15.0% |
| !!! | AATTTTTTTCAATGATTTTC+AGG | + | chr1_1:23907340-23907359 | Msa0014910:intron | 15.0% |
| !!! | ATTTTTTTCAATGATTTTCA+GGG | + | chr1_1:23907341-23907360 | Msa0014910:intron | 15.0% |
| !! | TAAAACAATTTCAGTATTAT+TGG | - | chr1_1:23907616-23907635 | None:intergenic | 15.0% |
| !!! | AATAATACTGAAATTGTTTT+AGG | + | chr1_1:23907615-23907634 | Msa0014910:intron | 15.0% |
| !!! | ATAATACTGAAATTGTTTTA+GGG | + | chr1_1:23907616-23907635 | Msa0014910:intron | 15.0% |
| !!! | ATAAAAAAAAGTTTTTCAGA+TGG | - | chr1_1:23910411-23910430 | None:intergenic | 15.0% |
| !!! | TCTGAAAAACTTTTTTTTAT+AGG | + | chr1_1:23910411-23910430 | Msa0014910:intron | 15.0% |
| !! | ACAACAAATCTATATATTAA+AGG | + | chr1_1:23910576-23910595 | Msa0014910:intron | 15.0% |
| !! | TATTATTATGATTGTTTAGA+AGG | + | chr1_1:23910627-23910646 | Msa0014910:intron | 15.0% |
| !!! | ATTTTTTTTGAGAGAAATTT+CGG | + | chr1_1:23910677-23910696 | Msa0014910:intron | 15.0% |
| !!! | TGTTTCCTTATATTTTTTTT+AGG | + | chr1_1:23911321-23911340 | Msa0014910:intron | 15.0% |
| !!! | TTTTGCCTAAAAAAAATATA+AGG | - | chr1_1:23911329-23911348 | None:intergenic | 15.0% |
| !!! | TTATATTTTTTTTAGGCAAA+AGG | + | chr1_1:23911328-23911347 | Msa0014910:intron | 15.0% |
| !! | TTTGTTTGGATTGATTATTA+GGG | - | chr1_1:23903416-23903435 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGGATTGATTATT+AGG | - | chr1_1:23903417-23903436 | None:intergenic | 20.0% |
| !!! | AACAATTTCTTCATTTTGTT+TGG | - | chr1_1:23903430-23903449 | None:intergenic | 20.0% |
| !! | TAGTGTATCGTTAATTAAAA+GGG | - | chr1_1:23904256-23904275 | None:intergenic | 20.0% |
| !! | ATAGTGTATCGTTAATTAAA+AGG | - | chr1_1:23904257-23904276 | None:intergenic | 20.0% |
| !!! | TTTTAATTAACGATACACTA+TGG | + | chr1_1:23904256-23904275 | Msa0014910:intron | 20.0% |
| !! | TTAAAAATCTTAGTGAAATG+TGG | + | chr1_1:23904381-23904400 | Msa0014910:intron | 20.0% |
| !! | ATATAAACCTGCAAAATTAA+GGG | - | chr1_1:23904447-23904466 | None:intergenic | 20.0% |
| !! | AATATAAACCTGCAAAATTA+AGG | - | chr1_1:23904448-23904467 | None:intergenic | 20.0% |
| !!! | ACCTTTTTAAACTTTGAATA+TGG | + | chr1_1:23904478-23904497 | Msa0014910:intron | 20.0% |
| !!! | TACTTTTAAAAACAGCAAAA+TGG | - | chr1_1:23906003-23906022 | None:intergenic | 20.0% |
| !!! | TTTTTCTAATTTTGGAGTTT+CGG | - | chr1_1:23906066-23906085 | None:intergenic | 20.0% |
| !!! | TTTTTCCATTAATGAGAAAA+TGG | - | chr1_1:23906102-23906121 | None:intergenic | 20.0% |
| !!! | TGTATTTTTTAGAAAAGTCA+AGG | - | chr1_1:23906141-23906160 | None:intergenic | 20.0% |
| !!! | ATTTATCATCTAAAATCCAA+TGG | - | chr1_1:23906335-23906354 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGATATATAAGGT+TGG | + | chr1_1:23906373-23906392 | Msa0014910:intron | 20.0% |
| !! | AGTATAGTTAGTATTACAAT+GGG | - | chr1_1:23906472-23906491 | None:intergenic | 20.0% |
| !! | TAGTATAGTTAGTATTACAA+TGG | - | chr1_1:23906473-23906492 | None:intergenic | 20.0% |
| !! | AGCATAATAGTTAATAGTAA+TGG | - | chr1_1:23907148-23907167 | None:intergenic | 20.0% |
| !!! | AATTCTTTTTGTCTTTCATT+CGG | + | chr1_1:23907490-23907509 | Msa0014910:intron | 20.0% |
| !! | ATTTGCTCAACAATTATTAT+GGG | + | chr1_1:23907590-23907609 | Msa0014910:intron | 20.0% |
| !!! | TTCTGTTTTGTAATTCATAA+AGG | + | chr1_1:23908520-23908539 | Msa0014910:intron | 20.0% |
| !!! | TCTGTTTTGTAATTCATAAA+GGG | + | chr1_1:23908521-23908540 | Msa0014910:intron | 20.0% |
| !!! | TTTTGTTTTGTAATTCAGAA+AGG | + | chr1_1:23908546-23908565 | Msa0014910:intron | 20.0% |
| !!! | TTTGTTTTGTAATTCAGAAA+GGG | + | chr1_1:23908547-23908566 | Msa0014910:intron | 20.0% |
| !! | ATGGAAATATAACAGTTTAA+GGG | + | chr1_1:23908632-23908651 | Msa0014910:intron | 20.0% |
| !! | ATCAAAAAGTTTCAAATTGA+TGG | + | chr1_1:23909095-23909114 | Msa0014910:intron | 20.0% |
| !! | ATCAAAAAGTTCCAAATTTA+TGG | - | chr1_1:23909212-23909231 | None:intergenic | 20.0% |
| !!! | TATTGTTTTATAGAGTCTAA+TGG | - | chr1_1:23909651-23909670 | None:intergenic | 20.0% |
| !! | AATTCAATAGGAAATAGATA+TGG | - | chr1_1:23909829-23909848 | None:intergenic | 20.0% |
| !! | ATATCTATTTCCTATTGAAT+TGG | + | chr1_1:23909828-23909847 | Msa0014910:intron | 20.0% |
| !! | AGCTTATCTATTTAGATAAT+AGG | + | chr1_1:23910382-23910401 | Msa0014910:intron | 20.0% |
| !!! | ATTTGAACCATATTTTTATG+TGG | - | chr1_1:23911028-23911047 | None:intergenic | 20.0% |
| !! | ATTTAAATCCAAATAGTTCT+TGG | - | chr1_1:23911053-23911072 | None:intergenic | 20.0% |
| !!! | TGTTGATAAAAAAGTTCAAA+TGG | - | chr1_1:23911727-23911746 | None:intergenic | 20.0% |
| !!! | ATTGTTTTACTTCCATATTT+TGG | - | chr1_1:23912048-23912067 | None:intergenic | 20.0% |
| !!! | GTTTTTTCTTCATTTCTTTA+TGG | + | chr1_1:23912086-23912105 | Msa0014910:three_prime_UTR | 20.0% |
| ! | ACAAGAAACAAACCAATTTA+CGG | - | chr1_1:23903668-23903687 | None:intergenic | 25.0% |
| !! | TTTGTTTGTTTCTTTGTTGT+AGG | + | chr1_1:23903906-23903925 | Msa0014910:intron | 25.0% |
| ! | TTAAACAACAATATGCTATG+AGG | + | chr1_1:23904057-23904076 | Msa0014910:intron | 25.0% |
| ! | TAAACAACAATATGCTATGA+GGG | + | chr1_1:23904058-23904077 | Msa0014910:intron | 25.0% |
| !! | AACAAATATTTAGGATTCTG+AGG | - | chr1_1:23904363-23904382 | None:intergenic | 25.0% |
| ! | GCCATATTCAAAGTTTAAAA+AGG | - | chr1_1:23904482-23904501 | None:intergenic | 25.0% |
| !!! | GTTTGTTGTTTAATGATGTA+TGG | + | chr1_1:23904513-23904532 | Msa0014910:intron | 25.0% |
| !!! | CTGTATTTATGGTATTTTAG+TGG | - | chr1_1:23904611-23904630 | None:intergenic | 25.0% |
| ! | ATATTACTAATAAGCCACAA+AGG | - | chr1_1:23904839-23904858 | None:intergenic | 25.0% |
| ! | TTGTGGCTTATTAGTAATAT+AGG | + | chr1_1:23904839-23904858 | Msa0014910:intron | 25.0% |
| !!! | TATTTTTTGATCTAGACAGA+TGG | - | chr1_1:23904878-23904897 | None:intergenic | 25.0% |
| ! | CTAGATCAAAAAATAGTTCT+TGG | + | chr1_1:23904883-23904902 | Msa0014910:intron | 25.0% |
| !! | AGTTGTTACTTAAAATCAGA+TGG | - | chr1_1:23904998-23905017 | None:intergenic | 25.0% |
| !! | TAGCTGATTTAATTCAACTA+AGG | + | chr1_1:23905113-23905132 | Msa0014910:CDS | 25.0% |
| ! | TTTGCTCTTTATATTGACAA+AGG | + | chr1_1:23905309-23905328 | Msa0014910:intron | 25.0% |
| ! | ATTGACAAAGGTTTAATATC+TGG | + | chr1_1:23905321-23905340 | Msa0014910:intron | 25.0% |
| ! | TTGACAAAGGTTTAATATCT+GGG | + | chr1_1:23905322-23905341 | Msa0014910:intron | 25.0% |
| !!! | ATCAAATGGTTTTAAAATGC+AGG | + | chr1_1:23905478-23905497 | Msa0014910:intron | 25.0% |
| ! | AAAAACCAAAACAGCAAATA+TGG | + | chr1_1:23906023-23906042 | Msa0014910:intron | 25.0% |
| ! | AAAACCAAAACAGCAAATAT+GGG | + | chr1_1:23906024-23906043 | Msa0014910:intron | 25.0% |
| ! | ACTCCAAAATTAGAAAAACA+CGG | + | chr1_1:23906068-23906087 | Msa0014910:intron | 25.0% |
| !!! | ATTTGCCATTTTCTCATTAA+TGG | + | chr1_1:23906094-23906113 | Msa0014910:intron | 25.0% |
| !! | TTCTAAAAAATACACAGCAT+TGG | + | chr1_1:23906147-23906166 | Msa0014910:intron | 25.0% |
| ! | CAATCAAAAGTGATGAATAA+GGG | - | chr1_1:23906311-23906330 | None:intergenic | 25.0% |
| ! | GTATAGTTAGTATTACAATG+GGG | - | chr1_1:23906471-23906490 | None:intergenic | 25.0% |
| ! | GTTGAATCACTAACAAAATA+TGG | - | chr1_1:23906687-23906706 | None:intergenic | 25.0% |
| ! | AAAATTGAATAACCACCAAT+AGG | + | chr1_1:23906935-23906954 | Msa0014910:intron | 25.0% |
| ! | AAATTGAATAACCACCAATA+GGG | + | chr1_1:23906936-23906955 | Msa0014910:intron | 25.0% |
| ! | AGGAATTTGGATAAAATAGA+AGG | + | chr1_1:23907000-23907019 | Msa0014910:intron | 25.0% |
| ! | GGAATTTGGATAAAATAGAA+GGG | + | chr1_1:23907001-23907020 | Msa0014910:intron | 25.0% |
| ! | AAGTTACTTGTAAGTCAAAA+AGG | + | chr1_1:23907200-23907219 | Msa0014910:intron | 25.0% |
| ! | TCTAGTTAAATGAAGAAGTT+CGG | + | chr1_1:23907290-23907309 | Msa0014910:intron | 25.0% |
| ! | CCTGATTTATTCATTACAAT+AGG | - | chr1_1:23907367-23907386 | None:intergenic | 25.0% |
| ! | CCTATTGTAATGAATAAATC+AGG | + | chr1_1:23907364-23907383 | Msa0014910:CDS | 25.0% |
| ! | TAAATCAGGTTATACTGAAA+AGG | + | chr1_1:23907378-23907397 | Msa0014910:CDS | 25.0% |
| ! | AAATCAGGTTATACTGAAAA+GGG | + | chr1_1:23907379-23907398 | Msa0014910:CDS | 25.0% |
| ! | GTTAAGATAATCATATCAGA+TGG | - | chr1_1:23907558-23907577 | None:intergenic | 25.0% |
| ! | TGATATGATTATCTTAACTG+TGG | + | chr1_1:23907560-23907579 | Msa0014910:intron | 25.0% |
| ! | TAATAATTGTTGAGCAAATC+CGG | - | chr1_1:23907589-23907608 | None:intergenic | 25.0% |
| !! | GATTTGCTCAACAATTATTA+TGG | + | chr1_1:23907589-23907608 | Msa0014910:intron | 25.0% |
| ! | ATTCAAGATATTAAAGCCAT+AGG | - | chr1_1:23907679-23907698 | None:intergenic | 25.0% |
| !! | ATTTTCTTCATTTTGCATGA+TGG | - | chr1_1:23907702-23907721 | None:intergenic | 25.0% |
| ! | TCATGCAAAATGAAGAAAAT+AGG | + | chr1_1:23907702-23907721 | Msa0014910:intron | 25.0% |
| ! | CATGCAAAATGAAGAAAATA+GGG | + | chr1_1:23907703-23907722 | Msa0014910:intron | 25.0% |
| ! | TTTGGTTATGTGTAAAATAC+TGG | + | chr1_1:23908124-23908143 | Msa0014910:intron | 25.0% |
| !! | AAAGCTATTTCCTATTGAAT+TGG | - | chr1_1:23908602-23908621 | None:intergenic | 25.0% |
| ! | AATTCAATAGGAAATAGCTT+TGG | + | chr1_1:23908601-23908620 | Msa0014910:intron | 25.0% |
| ! | GATGGAAATATAACAGTTTA+AGG | + | chr1_1:23908631-23908650 | Msa0014910:intron | 25.0% |
| ! | TATTGTTTGATAGAGTCTAA+TGG | + | chr1_1:23908687-23908706 | Msa0014910:intron | 25.0% |
| ! | TACTCACATTTGATGTTATT+TGG | - | chr1_1:23908727-23908746 | None:intergenic | 25.0% |
| ! | TGTAGAACAATATATCCAAT+GGG | - | chr1_1:23909367-23909386 | None:intergenic | 25.0% |
| ! | TTGTAGAACAATATATCCAA+TGG | - | chr1_1:23909366-23909385 | None:intergenic | 25.0% |
| ! | ATTGTTCTACAAAAATCTTG+AGG | + | chr1_1:23908963-23908982 | Msa0014910:CDS | 25.0% |
| ! | TAAAAAAGCGAGCTATATAT+TGG | + | chr1_1:23909262-23909281 | Msa0014910:intron | 25.0% |
| ! | TAGTAAGAAAGTAAGAGAAA+CGG | - | chr1_1:23909292-23909311 | None:intergenic | 25.0% |
| ! | AAGCAAACAAATATGAAAGA+TGG | - | chr1_1:23909003-23909022 | None:intergenic | 25.0% |
| ! | TTGTAGAACAATATATCCAA+TGG | + | chr1_1:23909366-23909385 | Msa0014910:intron | 25.0% |
| ! | TGTAGAACAATATATCCAAT+GGG | + | chr1_1:23909367-23909386 | Msa0014910:intron | 25.0% |
| ! | AAATATCAAGGATGGTAAAT+GGG | - | chr1_1:23909452-23909471 | None:intergenic | 25.0% |
| !!! | TTCTAATTCCCTTTTAGAAA+GGG | - | chr1_1:23909930-23909949 | None:intergenic | 25.0% |
| !!! | TTTCTAATTCCCTTTTAGAA+AGG | - | chr1_1:23909931-23909950 | None:intergenic | 25.0% |
| !!! | ATAGATTTGTTGTCTATGAA+AGG | - | chr1_1:23910569-23910588 | None:intergenic | 25.0% |
| !!! | ACCTTACAAATTGGTTTTTT+AGG | + | chr1_1:23910892-23910911 | Msa0014910:intron | 25.0% |
| ! | AATTGTTAGCGATAGTTATA+GGG | + | chr1_1:23910997-23911016 | Msa0014910:intron | 25.0% |
| !!! | GTTGTTGCAATGTTTATTTT+GGG | + | chr1_1:23911158-23911177 | Msa0014910:intron | 25.0% |
| !!! | TTGTTGCAATGTTTATTTTG+GGG | + | chr1_1:23911159-23911178 | Msa0014910:intron | 25.0% |
| !!! | AGACTGTTTTGAATTCAAAA+AGG | + | chr1_1:23911949-23911968 | Msa0014910:three_prime_UTR | 25.0% |
| !!! | TGTTTTGAATTCAAAAAGGT+TGG | + | chr1_1:23911953-23911972 | Msa0014910:three_prime_UTR | 25.0% |
| !!! | GTTTTGAATTCAAAAAGGTT+GGG | + | chr1_1:23911954-23911973 | Msa0014910:three_prime_UTR | 25.0% |
| !! | TTTTGAATTCAAAAAGGTTG+GGG | + | chr1_1:23911955-23911974 | Msa0014910:three_prime_UTR | 25.0% |
| !!! | CATTTTGGTATAGTTATAGA+AGG | + | chr1_1:23912242-23912261 | Msa0014910:three_prime_UTR | 25.0% |
| !! | AATTTAAAATGGGGAGAAAA+TGG | - | chr1_1:23912311-23912330 | None:intergenic | 25.0% |
| !!! | TTCTAGAGAGATTTTTGGTT+GGG | - | chr1_1:23903263-23903282 | None:intergenic | 30.0% |
| !!! | ATTCTAGAGAGATTTTTGGT+TGG | - | chr1_1:23903264-23903283 | None:intergenic | 30.0% |
| !!! | GTTTTTTTGAGTGGAGTTTA+GGG | - | chr1_1:23903314-23903333 | None:intergenic | 30.0% |
| !!! | ATAAGAGTGGTTTTTTTGAG+TGG | - | chr1_1:23903323-23903342 | None:intergenic | 30.0% |
| GAAGAAGATAAGAATAAGAG+TGG | - | chr1_1:23903336-23903355 | None:intergenic | 30.0% | |
| GTGCTATCACAATCAATAAA+TGG | - | chr1_1:23903703-23903722 | None:intergenic | 30.0% | |
| ! | TTTGTTTCTTTGTTGTAGGT+TGG | + | chr1_1:23903910-23903929 | Msa0014910:intron | 30.0% |
| AAGAGGAAGAGATGAAATTA+AGG | + | chr1_1:23903975-23903994 | Msa0014910:intron | 30.0% | |
| !! | AATTAAGGTTGATGATCTCA+AGG | + | chr1_1:23903990-23904009 | Msa0014910:intron | 30.0% |
| AAACAACAATATGCTATGAG+GGG | + | chr1_1:23904059-23904078 | Msa0014910:intron | 30.0% | |
| AATGTTGTCATGTGATTGAA+AGG | + | chr1_1:23904105-23904124 | Msa0014910:intron | 30.0% | |
| ! | TGGTCAATGCTTTAAATTTC+TGG | + | chr1_1:23904276-23904295 | Msa0014910:intron | 30.0% |
| ! | CAAAAAACCCTTAATTTTGC+AGG | + | chr1_1:23904437-23904456 | Msa0014910:intron | 30.0% |
| TAAACTTTGAATATGGCATG+TGG | + | chr1_1:23904485-23904504 | Msa0014910:intron | 30.0% | |
| AAATACCATAAATACAGAGC+TGG | + | chr1_1:23904614-23904633 | Msa0014910:intron | 30.0% | |
| AACAACAAGAATTTCACCTA+AGG | - | chr1_1:23904731-23904750 | None:intergenic | 30.0% | |
| !! | AGTTCTTGGCTTTCTTTTTA+CGG | + | chr1_1:23904897-23904916 | Msa0014910:intron | 30.0% |
| TTAAATCAGCTACAACATCA+GGG | - | chr1_1:23905105-23905124 | None:intergenic | 30.0% | |
| ATTAAATCAGCTACAACATC+AGG | - | chr1_1:23905106-23905125 | None:intergenic | 30.0% | |
| AGGTAATGTCTTCTTAATAC+TGG | + | chr1_1:23905210-23905229 | Msa0014910:intron | 30.0% | |
| TCCATGATGTCAAATTCAAA+CGG | + | chr1_1:23905345-23905364 | Msa0014910:intron | 30.0% | |
| !! | CCATTTGATTTGAACCATTA+GGG | - | chr1_1:23905467-23905486 | None:intergenic | 30.0% |
| !! | ACCATTTGATTTGAACCATT+AGG | - | chr1_1:23905468-23905487 | None:intergenic | 30.0% |
| AATAGATCTCCAAACACTTA+AGG | + | chr1_1:23905622-23905641 | Msa0014910:intron | 30.0% | |
| ATAGATCTCCAAACACTTAA+GGG | + | chr1_1:23905623-23905642 | Msa0014910:intron | 30.0% | |
| CTAAATCAAACAAACCCTAA+GGG | - | chr1_1:23905886-23905905 | None:intergenic | 30.0% | |
| ACTAAATCAAACAAACCCTA+AGG | - | chr1_1:23905887-23905906 | None:intergenic | 30.0% | |
| !!! | AAAACCCATATTTGCTGTTT+TGG | - | chr1_1:23906031-23906050 | None:intergenic | 30.0% |
| ! | TCTCCGTGTTTTTCTAATTT+TGG | - | chr1_1:23906074-23906093 | None:intergenic | 30.0% |
| CCAATCAAAAGTGATGAATA+AGG | - | chr1_1:23906312-23906331 | None:intergenic | 30.0% | |
| !! | CCTTATTCATCACTTTTGAT+TGG | + | chr1_1:23906309-23906328 | Msa0014910:intron | 30.0% |
| ! | TTTGATATATAAGGTTGGCT+TGG | + | chr1_1:23906378-23906397 | Msa0014910:intron | 30.0% |
| ! | ACTAAGTTGTTTCACTTAGA+TGG | - | chr1_1:23906533-23906552 | None:intergenic | 30.0% |
| AACATATTGTGGGATCTTAA+TGG | - | chr1_1:23906758-23906777 | None:intergenic | 30.0% | |
| ATTAAGATCCCACAATATGT+TGG | + | chr1_1:23906757-23906776 | Msa0014910:intron | 30.0% | |
| TATTAGAATCTATCCTTGCA+GGG | - | chr1_1:23906808-23906827 | None:intergenic | 30.0% | |
| ATATTAGAATCTATCCTTGC+AGG | - | chr1_1:23906809-23906828 | None:intergenic | 30.0% | |
| ACATGACATTCAACAGTTTA+AGG | - | chr1_1:23906860-23906879 | None:intergenic | 30.0% | |
| !! | GATGTATGAGTTGATTTACT+GGG | - | chr1_1:23906893-23906912 | None:intergenic | 30.0% |
| CATACATCCTTAATGTTTGT+AGG | + | chr1_1:23906905-23906924 | Msa0014910:intron | 30.0% | |
| ATCCTTAATGTTTGTAGGTT+TGG | + | chr1_1:23906910-23906929 | Msa0014910:intron | 30.0% | |
| TCCTTAATGTTTGTAGGTTT+GGG | + | chr1_1:23906911-23906930 | Msa0014910:intron | 30.0% | |
| AATTGAATAACCACCAATAG+GGG | + | chr1_1:23906937-23906956 | Msa0014910:intron | 30.0% | |
| GAATTTGGATAAAATAGCAG+TGG | + | chr1_1:23906970-23906989 | Msa0014910:intron | 30.0% | |
| AAAATAGCAGTGGAGAAAAA+AGG | + | chr1_1:23906980-23906999 | Msa0014910:intron | 30.0% | |
| !!! | GGATTTTTAGTCGAATTTGT+CGG | + | chr1_1:23907022-23907041 | Msa0014910:intron | 30.0% |
| GAACAATAATGTTTCTCAGT+TGG | + | chr1_1:23907092-23907111 | Msa0014910:intron | 30.0% | |
| AGAAAAATGATTTCATGGAC+TGG | - | chr1_1:23907260-23907279 | None:intergenic | 30.0% | |
| GCAGAAGAAAAATGATTTCA+TGG | - | chr1_1:23907265-23907284 | None:intergenic | 30.0% | |
| ATTATCTTAACTGTGGTTTC+CGG | + | chr1_1:23907567-23907586 | Msa0014910:intron | 30.0% | |
| TAGTGGTATGGTATATTATC+AGG | - | chr1_1:23907654-23907673 | None:intergenic | 30.0% | |
| TAAACCATAGAGTTCAAGTA+AGG | + | chr1_1:23907733-23907752 | Msa0014910:intron | 30.0% | |
| ACAAAAATGAAGTGATGAAG+AGG | - | chr1_1:23908316-23908335 | None:intergenic | 30.0% | |
| AAGAGAAACAGAAACAGAAA+AGG | - | chr1_1:23908428-23908447 | None:intergenic | 30.0% | |
| ! | AGGGAAAACAATTTCTGAAA+AGG | - | chr1_1:23908471-23908490 | None:intergenic | 30.0% |
| ! | AATTGTTTTCCCTTTCAGAA+AGG | + | chr1_1:23908478-23908497 | Msa0014910:intron | 30.0% |
| ! | ATTGTTTTCCCTTTCAGAAA+GGG | + | chr1_1:23908479-23908498 | Msa0014910:intron | 30.0% |
| TAACATCAAATGTGAGTAAC+AGG | + | chr1_1:23908729-23908748 | Msa0014910:intron | 30.0% | |
| CACTACTTCAAGAAATATCA+AGG | + | chr1_1:23908856-23908875 | Msa0014910:CDS | 30.0% | |
| ACTTCAAGAAATATCAAGGA+TGG | + | chr1_1:23908860-23908879 | Msa0014910:CDS | 30.0% | |
| CTTCAAGAAATATCAAGGAT+GGG | + | chr1_1:23908861-23908880 | Msa0014910:CDS | 30.0% | |
| AAATATCAAGGATGGGTAAA+TGG | + | chr1_1:23908868-23908887 | Msa0014910:CDS | 30.0% | |
| AATATCAAGGATGGGTAAAT+GGG | + | chr1_1:23908869-23908888 | Msa0014910:CDS | 30.0% | |
| CAAAAATCTTGAGGTAACAT+TGG | + | chr1_1:23908972-23908991 | Msa0014910:intron | 30.0% | |
| ! | AAATTGATGGTTGAAGCAAT+TGG | + | chr1_1:23909108-23909127 | Msa0014910:intron | 30.0% |
| TCAATATGGTCCAAATTTGA+TGG | + | chr1_1:23909131-23909150 | Msa0014910:intron | 30.0% | |
| ATTGCTTCAACCATCAAATT+TGG | - | chr1_1:23909144-23909163 | None:intergenic | 30.0% | |
| ! | AATTTGATGGTTGAAGCAAT+TGG | + | chr1_1:23909144-23909163 | Msa0014910:intron | 30.0% |
| TCAGTCAATATTGACCAATT+AGG | - | chr1_1:23909180-23909199 | None:intergenic | 30.0% | |
| GATTGCTTCAACCATAAATT+TGG | + | chr1_1:23909198-23909217 | Msa0014910:intron | 30.0% | |
| GAAATATCAAGGATGGTAAA+TGG | - | chr1_1:23909453-23909472 | None:intergenic | 30.0% | |
| ACTTCAAGAAATATCAAGGA+TGG | - | chr1_1:23908860-23908879 | None:intergenic | 30.0% | |
| CACTACTTCAAGAAATATCA+AGG | - | chr1_1:23908856-23908875 | None:intergenic | 30.0% | |
| !!! | ATTTTAACTGCTCATGAAGA+AGG | - | chr1_1:23909543-23909562 | None:intergenic | 30.0% |
| TACTTCCATTTGATGTTGTT+TGG | + | chr1_1:23909611-23909630 | Msa0014910:intron | 30.0% | |
| ! | TGTTTTATAGAGTCTAATGG+TGG | - | chr1_1:23909648-23909667 | None:intergenic | 30.0% |
| !!! | GGAGTTTTGTTATTCTGAAA+GGG | - | chr1_1:23909909-23909928 | None:intergenic | 30.0% |
| AACAAAACTCCCTTTCTAAA+AGG | + | chr1_1:23909918-23909937 | Msa0014910:intron | 30.0% | |
| ! | ACAAAACTCCCTTTCTAAAA+GGG | + | chr1_1:23909919-23909938 | Msa0014910:intron | 30.0% |
| TTATAGCTATTCTATCACTC+AGG | + | chr1_1:23910260-23910279 | Msa0014910:intron | 30.0% | |
| TATAGCTATTCTATCACTCA+GGG | + | chr1_1:23910261-23910280 | Msa0014910:intron | 30.0% | |
| !! | ATTTGTTGTCTATGAAAGGA+TGG | - | chr1_1:23910565-23910584 | None:intergenic | 30.0% |
| ! | TATTAAAGGATGAGCTTTGT+AGG | + | chr1_1:23910590-23910609 | Msa0014910:intron | 30.0% |
| TAAGGCAGAATTTCCATAAT+AGG | - | chr1_1:23910709-23910728 | None:intergenic | 30.0% | |
| AAAAACCAATTTGTAAGGTG+AGG | - | chr1_1:23910891-23910910 | None:intergenic | 30.0% | |
| GCCTAAAAAACCAATTTGTA+AGG | - | chr1_1:23910896-23910915 | None:intergenic | 30.0% | |
| GTCCTCTTAAAACATGAATT+GGG | - | chr1_1:23910918-23910937 | None:intergenic | 30.0% | |
| TGTCCTCTTAAAACATGAAT+TGG | - | chr1_1:23910919-23910938 | None:intergenic | 30.0% | |
| CAATTGTTAGCGATAGTTAT+AGG | + | chr1_1:23910996-23911015 | Msa0014910:intron | 30.0% | |
| TCAAATCACCAAGAACTATT+TGG | + | chr1_1:23911042-23911061 | Msa0014910:intron | 30.0% | |
| ! | CATAACCTTTACCTTTTAAG+TGG | - | chr1_1:23911138-23911157 | None:intergenic | 30.0% |
| CACTTAAAAGGTAAAGGTTA+TGG | + | chr1_1:23911136-23911155 | Msa0014910:intron | 30.0% | |
| ! | GGTTGTTGCAATGTTTATTT+TGG | + | chr1_1:23911157-23911176 | Msa0014910:intron | 30.0% |
| TTAGTTGTCAAGGAAATCTT+CGG | + | chr1_1:23911462-23911481 | Msa0014910:CDS | 30.0% | |
| TTCATGCTAGTTAAATTGAC+TGG | + | chr1_1:23911531-23911550 | Msa0014910:intron | 30.0% | |
| ! | CTTTAAGAAACTTCAAAGAG+AGG | - | chr1_1:23911614-23911633 | None:intergenic | 30.0% |
| !! | ATATTTTGGATTCGAGATGA+TGG | - | chr1_1:23912034-23912053 | None:intergenic | 30.0% |
| ATCATCTCGAATCCAAAATA+TGG | + | chr1_1:23912033-23912052 | Msa0014910:three_prime_UTR | 30.0% | |
| ! | TGGCATATCACTTTAAGAAT+AGG | + | chr1_1:23912283-23912302 | Msa0014910:three_prime_UTR | 30.0% |
| AAGAACGGTTGAGATTGAAA+GGG | - | chr1_1:23903288-23903307 | None:intergenic | 35.0% | |
| AAAGAACGGTTGAGATTGAA+AGG | - | chr1_1:23903289-23903308 | None:intergenic | 35.0% | |
| TGGAGTTTAGGGAAAAAGAA+CGG | - | chr1_1:23903303-23903322 | None:intergenic | 35.0% | |
| !!! | GGTTTTTTTGAGTGGAGTTT+AGG | - | chr1_1:23903315-23903334 | None:intergenic | 35.0% |
| AAGTTGAAGAAGAACTTCCA+TGG | + | chr1_1:23903457-23903476 | Msa0014910:CDS | 35.0% | |
| !! | AGAGCTTTTTCTTGAATCCA+TGG | - | chr1_1:23903477-23903496 | None:intergenic | 35.0% |
| ! | ATTGTGATAGCACTGAGTAT+TGG | + | chr1_1:23903710-23903729 | Msa0014910:intron | 35.0% |
| GCTTCGTAGATTGTGATTAA+AGG | + | chr1_1:23903871-23903890 | Msa0014910:intron | 35.0% | |
| AAATGCAATGCTGTGTAAGT+CGG | + | chr1_1:23903936-23903955 | Msa0014910:intron | 35.0% | |
| AACAACAATATGCTATGAGG+GGG | + | chr1_1:23904060-23904079 | Msa0014910:intron | 35.0% | |
| ! | CAGCCTTTTGTGTAAATAAC+CGG | + | chr1_1:23904150-23904169 | Msa0014910:intron | 35.0% |
| ! | AGCCTTTTGTGTAAATAACC+GGG | + | chr1_1:23904151-23904170 | Msa0014910:intron | 35.0% |
| TACCCGGTTATTTACACAAA+AGG | - | chr1_1:23904156-23904175 | None:intergenic | 35.0% | |
| TTTGTGTAAATAACCGGGTA+AGG | + | chr1_1:23904156-23904175 | Msa0014910:intron | 35.0% | |
| TGTAGTAGACCTCTAAATTG+TGG | + | chr1_1:23904310-23904329 | Msa0014910:intron | 35.0% | |
| TACAAAGTGAACACAGTTCA+GGG | - | chr1_1:23904407-23904426 | None:intergenic | 35.0% | |
| !! | TATGGCTCCTCATTTTGTTT+TGG | + | chr1_1:23904531-23904550 | Msa0014910:intron | 35.0% |
| !!! | ATGGCTCCTCATTTTGTTTT+GGG | + | chr1_1:23904532-23904551 | Msa0014910:intron | 35.0% |
| ATAAGCCCCAAAACAAAATG+AGG | - | chr1_1:23904541-23904560 | None:intergenic | 35.0% | |
| CAATACCAGCTCTGTATTTA+TGG | - | chr1_1:23904622-23904641 | None:intergenic | 35.0% | |
| AATTTCACCTAAGGTTAGAC+AGG | - | chr1_1:23904722-23904741 | None:intergenic | 35.0% | |
| TAGTTATGTAGTCACCTTTG+TGG | + | chr1_1:23904822-23904841 | Msa0014910:intron | 35.0% | |
| !! | GTTCTTGGCTTTCTTTTTAC+GGG | + | chr1_1:23904898-23904917 | Msa0014910:intron | 35.0% |
| ! | ATTCATATCCAGACAGGTTT+TGG | + | chr1_1:23905022-23905041 | Msa0014910:intron | 35.0% |
| GTTTCTCATTCAGAGCATAT+CGG | - | chr1_1:23905075-23905094 | None:intergenic | 35.0% | |
| AAAATAAACTTCCACGCACA+AGG | - | chr1_1:23905258-23905277 | None:intergenic | 35.0% | |
| ! | TTGTGCGTGGAAGTTTATTT+TGG | + | chr1_1:23905257-23905276 | Msa0014910:intron | 35.0% |
| !!! | GTGGAAGTTTATTTTGGCTT+AGG | + | chr1_1:23905263-23905282 | Msa0014910:intron | 35.0% |
| ACCGTTTGAATTTGACATCA+TGG | - | chr1_1:23905349-23905368 | None:intergenic | 35.0% | |
| TGATTTGAACCATTAGGGTT+GGG | - | chr1_1:23905462-23905481 | None:intergenic | 35.0% | |
| ! | TTGATTTGAACCATTAGGGT+TGG | - | chr1_1:23905463-23905482 | None:intergenic | 35.0% |
| CCCTAATGGTTCAAATCAAA+TGG | + | chr1_1:23905464-23905483 | Msa0014910:intron | 35.0% | |
| CTATTCATTAGTACCTTCGA+GGG | + | chr1_1:23905518-23905537 | Msa0014910:intron | 35.0% | |
| TTCCTTTGGGTAACATTGAA+GGG | + | chr1_1:23905549-23905568 | Msa0014910:intron | 35.0% | |
| TGGTCATTTATGCCATTGTT+TGG | + | chr1_1:23905575-23905594 | Msa0014910:intron | 35.0% | |
| ATCTATTTGACATGCTTGAC+GGG | - | chr1_1:23905609-23905628 | None:intergenic | 35.0% | |
| GATCTATTTGACATGCTTGA+CGG | - | chr1_1:23905610-23905629 | None:intergenic | 35.0% | |
| AGTTAGTATTACAATGGGGT+GGG | - | chr1_1:23906467-23906486 | None:intergenic | 35.0% | |
| TAGTTAGTATTACAATGGGG+TGG | - | chr1_1:23906468-23906487 | None:intergenic | 35.0% | |
| CTAAGTGAAACAACTTAGTC+AGG | + | chr1_1:23906534-23906553 | Msa0014910:intron | 35.0% | |
| !! | TTTTTCAGCATCAATAGCCT+TGG | - | chr1_1:23906579-23906598 | None:intergenic | 35.0% |
| TCTTTCGCAGGTTACAAAAA+TGG | - | chr1_1:23906732-23906751 | None:intergenic | 35.0% | |
| !! | TCTTAATGGATTTCTTTCGC+AGG | - | chr1_1:23906744-23906763 | None:intergenic | 35.0% |
| AATTCCGACCAACATATTGT+GGG | - | chr1_1:23906768-23906787 | None:intergenic | 35.0% | |
| ATTTATCTGACCAATGTCAC+AGG | + | chr1_1:23906831-23906850 | Msa0014910:intron | 35.0% | |
| !! | ATGAGTTGATTTACTGGGAA+GGG | - | chr1_1:23906888-23906907 | None:intergenic | 35.0% |
| !! | TATGAGTTGATTTACTGGGA+AGG | - | chr1_1:23906889-23906908 | None:intergenic | 35.0% |
| !! | GGATGTATGAGTTGATTTAC+TGG | - | chr1_1:23906894-23906913 | None:intergenic | 35.0% |
| TCCCAAACCTACAAACATTA+AGG | - | chr1_1:23906915-23906934 | None:intergenic | 35.0% | |
| TTCATTATTACTGCCCCTAT+TGG | - | chr1_1:23906953-23906972 | None:intergenic | 35.0% | |
| AGGGGCAGTAATAATGAATT+TGG | + | chr1_1:23906955-23906974 | Msa0014910:intron | 35.0% | |
| CAGTGGAGAAAAAAGGAATT+TGG | + | chr1_1:23906987-23907006 | Msa0014910:intron | 35.0% | |
| !! | TTCTCAGTTGGTAGCATATT+TGG | + | chr1_1:23907104-23907123 | Msa0014910:intron | 35.0% |
| !! | TCTCAGTTGGTAGCATATTT+GGG | + | chr1_1:23907105-23907124 | Msa0014910:intron | 35.0% |
| !! | CATATTTGGGTTGTATACTC+TGG | + | chr1_1:23907118-23907137 | Msa0014910:intron | 35.0% |
| AAAGGTCTTCTATCTATCTG+AGG | + | chr1_1:23907438-23907457 | Msa0014910:CDS | 35.0% | |
| !!! | GAAATTGTTTTAGGGAGATG+TGG | + | chr1_1:23907624-23907643 | Msa0014910:intron | 35.0% |
| TATTAAAGCCATAGGACTAG+TGG | - | chr1_1:23907671-23907690 | None:intergenic | 35.0% | |
| TTCACCTTACTTGAACTCTA+TGG | - | chr1_1:23907740-23907759 | None:intergenic | 35.0% | |
| AGTAATGTTAAGCTTGTGTG+TGG | - | chr1_1:23907806-23907825 | None:intergenic | 35.0% | |
| TAAATCTCTCACAGCAGTAT+AGG | - | chr1_1:23907851-23907870 | None:intergenic | 35.0% | |
| GATGAGTTTCACTAAGAAAC+CGG | - | chr1_1:23907931-23907950 | None:intergenic | 35.0% | |
| TAGTGAAACTCATCAAGATG+AGG | + | chr1_1:23907937-23907956 | Msa0014910:intron | 35.0% | |
| !! | TCCAAACGGTTTTATGTGAA+GGG | - | chr1_1:23908154-23908173 | None:intergenic | 35.0% |
| TTCACATAAAACCGTTTGGA+GGG | + | chr1_1:23908154-23908173 | Msa0014910:intron | 35.0% | |
| TACTAAATCAACCCTCCAAA+CGG | - | chr1_1:23908168-23908187 | None:intergenic | 35.0% | |
| ! | AAAGAAGAGGTTGTGTTTTG+CGG | - | chr1_1:23908240-23908259 | None:intergenic | 35.0% |
| TTGTTGTACGTACAAAGAAG+AGG | - | chr1_1:23908253-23908272 | None:intergenic | 35.0% | |
| ! | ACAAAACTCCCTTTCTGAAA+GGG | - | chr1_1:23908490-23908509 | None:intergenic | 35.0% |
| AACAAAACTCCCTTTCTGAA+AGG | - | chr1_1:23908491-23908510 | None:intergenic | 35.0% | |
| CTGTTCTGTTCCAATTCAAT+AGG | + | chr1_1:23908589-23908608 | Msa0014910:intron | 35.0% | |
| TGTTTGATAGAGTCTAATGG+TGG | + | chr1_1:23908690-23908709 | Msa0014910:intron | 35.0% | |
| ! | AGTCTAATGGTGGAATTTCT+AGG | + | chr1_1:23908700-23908719 | Msa0014910:intron | 35.0% |
| ! | GTCTAATGGTGGAATTTCTA+GGG | + | chr1_1:23908701-23908720 | Msa0014910:intron | 35.0% |
| CTTGAGGTAACATTGGAAAA+AGG | + | chr1_1:23908979-23908998 | Msa0014910:intron | 35.0% | |
| GTTGAAGCAATTGGTCAATA+TGG | + | chr1_1:23909117-23909136 | Msa0014910:intron | 35.0% | |
| GTTGAAGCAATTGGTCAATA+TGG | + | chr1_1:23909117-23909136 | Msa0014910:intron | 35.0% | |
| TTGGTCAATATGGTCCTAAT+TGG | + | chr1_1:23909163-23909182 | Msa0014910:intron | 35.0% | |
| !!! | AGCTCGCTTTTTTACCTAAA+TGG | - | chr1_1:23909256-23909275 | None:intergenic | 35.0% |
| AAAAGTCCTGAGGTTACATT+GGG | - | chr1_1:23909348-23909367 | None:intergenic | 35.0% | |
| ATTGTTCTACAAAAGTCCTG+AGG | - | chr1_1:23909358-23909377 | None:intergenic | 35.0% | |
| TAGTGCCAAACAACATCAAA+TGG | - | chr1_1:23909619-23909638 | None:intergenic | 35.0% | |
| TGGTTTGAATAGCTCAATAG+AGG | + | chr1_1:23909743-23909762 | Msa0014910:intron | 35.0% | |
| ! | AGCATTGGAATCAACAACAT+TGG | + | chr1_1:23909779-23909798 | Msa0014910:intron | 35.0% |
| TCAACAACATTGGATGATGA+TGG | + | chr1_1:23909789-23909808 | Msa0014910:intron | 35.0% | |
| CTGTTCTGTTCCAATTCAAT+AGG | - | chr1_1:23908589-23908608 | None:intergenic | 35.0% | |
| !!! | GGGAGTTTTGTTATTCTGAA+AGG | - | chr1_1:23909910-23909929 | None:intergenic | 35.0% |
| !! | CATCACTTGATTTCTGAAAC+AGG | - | chr1_1:23910043-23910062 | None:intergenic | 35.0% |
| TCAGAAATCAAGTGATGAAG+AGG | + | chr1_1:23910046-23910065 | Msa0014910:intron | 35.0% | |
| !! | GATCCATAATGGATCAACTA+GGG | + | chr1_1:23910283-23910302 | Msa0014910:intron | 35.0% |
| !! | ATCCATAATGGATCAACTAG+GGG | + | chr1_1:23910284-23910303 | Msa0014910:intron | 35.0% |
| GGGTAAGATATGATATCAAG+CGG | + | chr1_1:23910329-23910348 | Msa0014910:intron | 35.0% | |
| CCACAAGACGAAATACAATT+GGG | + | chr1_1:23910650-23910669 | Msa0014910:intron | 35.0% | |
| ! | TCGAGCATTGTCTTGATATA+TGG | + | chr1_1:23910828-23910847 | Msa0014910:intron | 35.0% |
| TATCTTATCCACCATCTTCA+TGG | - | chr1_1:23910965-23910984 | None:intergenic | 35.0% | |
| GGATCGACCACATAAAAATA+TGG | + | chr1_1:23911018-23911037 | Msa0014910:intron | 35.0% | |
| CGTTAGACATGATTCGTAAT+AGG | + | chr1_1:23911078-23911097 | Msa0014910:intron | 35.0% | |
| TTTAAGTGGCATGAGCTATA+TGG | - | chr1_1:23911124-23911143 | None:intergenic | 35.0% | |
| ! | TATAGCTCATGCCACTTAAA+AGG | + | chr1_1:23911124-23911143 | Msa0014910:intron | 35.0% |
| ! | TCATGCCACTTAAAAGGTAA+AGG | + | chr1_1:23911130-23911149 | Msa0014910:intron | 35.0% |
| CAAAAAATCACACTTCGTTC+TGG | + | chr1_1:23911189-23911208 | Msa0014910:intron | 35.0% | |
| !! | AAGAAGCCTTGTTAACTCTT+GGG | + | chr1_1:23911242-23911261 | Msa0014910:intron | 35.0% |
| ! | CTATCTTTTGAACAGAACTC+TGG | - | chr1_1:23911438-23911457 | None:intergenic | 35.0% |
| GAAGATTTCCTTGACAACTA+AGG | - | chr1_1:23911463-23911482 | None:intergenic | 35.0% | |
| TAGTTGTCAAGGAAATCTTC+GGG | + | chr1_1:23911463-23911482 | Msa0014910:CDS | 35.0% | |
| AGATTCAGAAGATTCTAGTG+AGG | + | chr1_1:23911902-23911921 | Msa0014910:CDS | 35.0% | |
| CAAACAATCTTCTCATGACT+TGG | + | chr1_1:23911989-23912008 | Msa0014910:three_prime_UTR | 35.0% | |
| ACATCAATGCTGTTAAAGAC+TGG | - | chr1_1:23912183-23912202 | None:intergenic | 35.0% | |
| !! | TAACAGCATTGATGTTACTG+TGG | + | chr1_1:23912188-23912207 | Msa0014910:three_prime_UTR | 35.0% |
| !!! | AGAGATTTTTGGTTGGGAGA+GGG | - | chr1_1:23903257-23903276 | None:intergenic | 40.0% |
| !! | GGGGATTCTAGAGAGATTTT+TGG | - | chr1_1:23903268-23903287 | None:intergenic | 40.0% |
| AGAACGGTTGAGATTGAAAG+GGG | - | chr1_1:23903287-23903306 | None:intergenic | 40.0% | |
| TGATGAAGATGCTGAAGCAA+CGG | - | chr1_1:23903370-23903389 | None:intergenic | 40.0% | |
| CTTGACCTTGTTGAATTCAC+CGG | + | chr1_1:23903495-23903514 | Msa0014910:CDS | 40.0% | |
| AATCGCTTGTGTAACTGAAC+CGG | - | chr1_1:23903517-23903536 | None:intergenic | 40.0% | |
| GTAAGACCTAGATAACCAAG+CGG | - | chr1_1:23903588-23903607 | None:intergenic | 40.0% | |
| TCTCAAGGCTATTGAGAACA+AGG | + | chr1_1:23904005-23904024 | Msa0014910:intron | 40.0% | |
| ! | CATTTTTACCAGTTGCACCA+AGG | - | chr1_1:23904089-23904108 | None:intergenic | 40.0% |
| GTCATGTGATTGAAAGGTCA+CGG | + | chr1_1:23904111-23904130 | Msa0014910:intron | 40.0% | |
| TCATGTGATTGAAAGGTCAC+GGG | + | chr1_1:23904112-23904131 | Msa0014910:intron | 40.0% | |
| CTGCGTACAATACACCAAAT+GGG | + | chr1_1:23904179-23904198 | Msa0014910:intron | 40.0% | |
| TGCGTACAATACACCAAATG+GGG | + | chr1_1:23904180-23904199 | Msa0014910:intron | 40.0% | |
| CGTTAATTAAAAGGGCAACC+CGG | - | chr1_1:23904248-23904267 | None:intergenic | 40.0% | |
| AGTCTGCAACCACAATTTAG+AGG | - | chr1_1:23904322-23904341 | None:intergenic | 40.0% | |
| CTACAAAGTGAACACAGTTC+AGG | - | chr1_1:23904408-23904427 | None:intergenic | 40.0% | |
| !!! | TGGCTCCTCATTTTGTTTTG+GGG | + | chr1_1:23904533-23904552 | Msa0014910:intron | 40.0% |
| CCATCACGATGAATTGATGA+TGG | - | chr1_1:23904655-23904674 | None:intergenic | 40.0% | |
| CCATCATCAATTCATCGTGA+TGG | + | chr1_1:23904652-23904671 | Msa0014910:intron | 40.0% | |
| ! | TCTTTTGCCTGTCTAACCTT+AGG | + | chr1_1:23904712-23904731 | Msa0014910:intron | 40.0% |
| !! | TTGGCTTTCTTTTTACGGGT+TGG | + | chr1_1:23904902-23904921 | Msa0014910:intron | 40.0% |
| ! | TGGCTTTCTTTTTACGGGTT+GGG | + | chr1_1:23904903-23904922 | Msa0014910:intron | 40.0% |
| CTGCAAATTCATATCCAGAC+AGG | + | chr1_1:23905016-23905035 | Msa0014910:intron | 40.0% | |
| !!! | TATCCAGACAGGTTTTGGTT+TGG | + | chr1_1:23905027-23905046 | Msa0014910:intron | 40.0% |
| ! | CTGGACACAGTTTTCATTTG+AGG | + | chr1_1:23905229-23905248 | Msa0014910:intron | 40.0% |
| !! | GGCTGTGTAGAAAAGTATTC+TGG | + | chr1_1:23905284-23905303 | Msa0014910:intron | 40.0% |
| ! | GTAGTGGTGGTGAATTGTTT+GGG | - | chr1_1:23905427-23905446 | None:intergenic | 40.0% |
| ! | AGTAGTGGTGGTGAATTGTT+TGG | - | chr1_1:23905428-23905447 | None:intergenic | 40.0% |
| !! | CCTCGAAGGTACTAATGAAT+AGG | - | chr1_1:23905520-23905539 | None:intergenic | 40.0% |
| CCTATTCATTAGTACCTTCG+AGG | + | chr1_1:23905517-23905536 | Msa0014910:intron | 40.0% | |
| GAGGGAAAAGTAGTTCCTTT+GGG | + | chr1_1:23905536-23905555 | Msa0014910:intron | 40.0% | |
| GTTCCTTTGGGTAACATTGA+AGG | + | chr1_1:23905548-23905567 | Msa0014910:intron | 40.0% | |
| CGGGTAACAAAACCAAACAA+TGG | - | chr1_1:23905590-23905609 | None:intergenic | 40.0% | |
| CAAACACACCCTTAAGTGTT+TGG | - | chr1_1:23905634-23905653 | None:intergenic | 40.0% | |
| ! | CAAACACTTAAGGGTGTGTT+TGG | + | chr1_1:23905632-23905651 | Msa0014910:intron | 40.0% |
| ! | TTAAGGGTGTGTTTGGATTG+AGG | + | chr1_1:23905639-23905658 | Msa0014910:intron | 40.0% |
| ! | TAAGGGTGTGTTTGGATTGA+GGG | + | chr1_1:23905640-23905659 | Msa0014910:intron | 40.0% |
| TGTGTTTGGATTGAGGGTTT+AGG | + | chr1_1:23905646-23905665 | Msa0014910:intron | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | + | chr1_1:23905650-23905669 | Msa0014910:intron | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | - | chr1_1:23905650-23905669 | None:intergenic | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | - | chr1_1:23905646-23905665 | None:intergenic | 40.0% | |
| ! | TAAGGGTGTGTTTGGATTGA+GGG | - | chr1_1:23905640-23905659 | None:intergenic | 40.0% |
| TCAATCCAAACACACCCTTA+GGG | + | chr1_1:23905869-23905888 | Msa0014910:intron | 40.0% | |
| !! | CATCACTTTTGATTGGCCAT+TGG | + | chr1_1:23906316-23906335 | Msa0014910:intron | 40.0% |
| !! | GATATATAAGGTTGGCTTGG+TGG | + | chr1_1:23906381-23906400 | Msa0014910:intron | 40.0% |
| ! | TAAGAAGTGGTGGAGTGATT+AGG | + | chr1_1:23906419-23906438 | Msa0014910:intron | 40.0% |
| GTTAGTATTACAATGGGGTG+GGG | - | chr1_1:23906466-23906485 | None:intergenic | 40.0% | |
| ATCTCGTTCTCTTACCACTA+CGG | - | chr1_1:23906649-23906668 | None:intergenic | 40.0% | |
| TAAAGATACAACTCTGCTGG+TGG | - | chr1_1:23906709-23906728 | None:intergenic | 40.0% | |
| TGGTAAAGATACAACTCTGC+TGG | - | chr1_1:23906712-23906731 | None:intergenic | 40.0% | |
| AGATCCCACAATATGTTGGT+CGG | + | chr1_1:23906761-23906780 | Msa0014910:intron | 40.0% | |
| CAATTCCGACCAACATATTG+TGG | - | chr1_1:23906769-23906788 | None:intergenic | 40.0% | |
| ATGTTGGTCGGAATTGCTAA+AGG | + | chr1_1:23906773-23906792 | Msa0014910:intron | 40.0% | |
| ATTATTACTGCCCCTATTGG+TGG | - | chr1_1:23906950-23906969 | None:intergenic | 40.0% | |
| AGTCGAATTTGTCGGTACTA+TGG | + | chr1_1:23907030-23907049 | Msa0014910:intron | 40.0% | |
| CATGTTTCGTGATTCTGTGT+CGG | - | chr1_1:23907227-23907246 | None:intergenic | 40.0% | |
| CAAGAGAAAACTAGCTGTTC+AGG | + | chr1_1:23907405-23907424 | Msa0014910:CDS | 40.0% | |
| ! | GTCTTCTATCTATCTGAGGT+AGG | + | chr1_1:23907442-23907461 | Msa0014910:intron | 40.0% |
| ATACCATACCACTAGTCCTA+TGG | + | chr1_1:23907660-23907679 | Msa0014910:intron | 40.0% | |
| AGTTTCACTAAGAAACCGGT+GGG | - | chr1_1:23907927-23907946 | None:intergenic | 40.0% | |
| TGAAACTCATCAAGATGAGG+TGG | + | chr1_1:23907940-23907959 | Msa0014910:intron | 40.0% | |
| GAAACTCATCAAGATGAGGT+GGG | + | chr1_1:23907941-23907960 | Msa0014910:intron | 40.0% | |
| ! | GCTAGCTTCTCTGTTAATAG+CGG | + | chr1_1:23907963-23907982 | Msa0014910:intron | 40.0% |
| !!! | GCATCGCTTTTTGTCAGTTT+TGG | - | chr1_1:23908011-23908030 | None:intergenic | 40.0% |
| !! | CTCCAAACGGTTTTATGTGA+AGG | - | chr1_1:23908155-23908174 | None:intergenic | 40.0% |
| CTTCACATAAAACCGTTTGG+AGG | + | chr1_1:23908153-23908172 | Msa0014910:intron | 40.0% | |
| ATGGGAGAAGAGTGATTTCA+GGG | - | chr1_1:23908201-23908220 | None:intergenic | 40.0% | |
| !!! | TGATGAAGAGGTTGCTTTTG+CGG | - | chr1_1:23910058-23910077 | None:intergenic | 40.0% |
| CCTGTTTCAGATATGAAGAG+AGG | - | chr1_1:23908342-23908361 | None:intergenic | 40.0% | |
| ! | CCTCTCTTCATATCTGAAAC+AGG | + | chr1_1:23908339-23908358 | Msa0014910:intron | 40.0% |
| !! | AGGAAATAGCTTTGGCAAGT+AGG | + | chr1_1:23908609-23908628 | Msa0014910:intron | 40.0% |
| !! | AATAGCTTTGGCAAGTAGGA+TGG | + | chr1_1:23908613-23908632 | Msa0014910:intron | 40.0% |
| TAGAGCATGCAAAAAGACAC+CGG | + | chr1_1:23908758-23908777 | Msa0014910:intron | 40.0% | |
| AAGGATGGGTAAATGGGAAA+AGG | + | chr1_1:23908875-23908894 | Msa0014910:CDS | 40.0% | |
| ! | TTTTGTAGTACCCTTCTTGG+CGG | - | chr1_1:23909392-23909411 | None:intergenic | 40.0% |
| CGTTGAACGCAATTCCATTT+AGG | - | chr1_1:23909068-23909087 | None:intergenic | 40.0% | |
| CAAAAGTCCTGAGGTTACAT+TGG | - | chr1_1:23909349-23909368 | None:intergenic | 40.0% | |
| CAAGGATGGTAAATGGGAAA+AGG | - | chr1_1:23909446-23909465 | None:intergenic | 40.0% | |
| GGTGAAATCTGTTTCATGTG+AGG | - | chr1_1:23909508-23909527 | None:intergenic | 40.0% | |
| TGAAGAAGGTAGATTGGCAA+AGG | - | chr1_1:23909529-23909548 | None:intergenic | 40.0% | |
| TGCTCATGAAGAAGGTAGAT+TGG | - | chr1_1:23909535-23909554 | None:intergenic | 40.0% | |
| AAAATCAGTTTCACCTCCTC+CGG | + | chr1_1:23909558-23909577 | Msa0014910:intron | 40.0% | |
| TAGAGCTTGCAAAAAGACAC+CGG | - | chr1_1:23909580-23909599 | None:intergenic | 40.0% | |
| ATTTCCATCCTATGTCACGA+AGG | + | chr1_1:23909718-23909737 | Msa0014910:intron | 40.0% | |
| TTTCCATCCTATGTCACGAA+GGG | + | chr1_1:23909719-23909738 | Msa0014910:intron | 40.0% | |
| TTTGTGAAAGAGCAACAGAG+AGG | + | chr1_1:23909955-23909974 | Msa0014910:intron | 40.0% | |
| TTGTGAAAGAGCAACAGAGA+GGG | + | chr1_1:23909956-23909975 | Msa0014910:intron | 40.0% | |
| !!! | TGATGAAGAGGTTGCTTTTG+TGG | + | chr1_1:23910058-23910077 | Msa0014910:intron | 40.0% |
| !! | AAGCGTTTGGAGAAAGCATT+GGG | - | chr1_1:23910167-23910186 | None:intergenic | 40.0% |
| TATCACTCAGGGATCCATAA+TGG | + | chr1_1:23910272-23910291 | Msa0014910:intron | 40.0% | |
| !! | GGATCCATAATGGATCAACT+AGG | + | chr1_1:23910282-23910301 | Msa0014910:intron | 40.0% |
| ATATCATATCTTACCCCACC+CGG | - | chr1_1:23910325-23910344 | None:intergenic | 40.0% | |
| AATAGATAAGCTTCCTACGC+TGG | - | chr1_1:23910374-23910393 | None:intergenic | 40.0% | |
| CTACAGTTAGACTCATCCAA+TGG | + | chr1_1:23910438-23910457 | Msa0014910:intron | 40.0% | |
| ! | ATCCAATGGTGGAAGATCTT+CGG | + | chr1_1:23910452-23910471 | Msa0014910:intron | 40.0% |
| ACCTGATCTAGTGAGTGATA+CGG | - | chr1_1:23910527-23910546 | None:intergenic | 40.0% | |
| TCACTAGATCAGGTTACCTT+AGG | + | chr1_1:23910533-23910552 | Msa0014910:intron | 40.0% | |
| GAAAGGATGGTATGATCCTA+AGG | - | chr1_1:23910552-23910571 | None:intergenic | 40.0% | |
| GCCACAAGACGAAATACAAT+TGG | + | chr1_1:23910649-23910668 | Msa0014910:intron | 40.0% | |
| CCCAATTGTATTTCGTCTTG+TGG | - | chr1_1:23910653-23910672 | None:intergenic | 40.0% | |
| ATTTCGGACAGCACCTATTA+TGG | + | chr1_1:23910693-23910712 | Msa0014910:intron | 40.0% | |
| TCCAACACCTTCATTGTGTT+GGG | + | chr1_1:23910786-23910805 | Msa0014910:intron | 40.0% | |
| CTTCATTGTGTTGGGTGTTA+GGG | + | chr1_1:23910794-23910813 | Msa0014910:intron | 40.0% | |
| TTCATTGTGTTGGGTGTTAG+GGG | + | chr1_1:23910795-23910814 | Msa0014910:intron | 40.0% | |
| AGTGCTTATAAAGCTTGAGC+TGG | + | chr1_1:23910865-23910884 | Msa0014910:intron | 40.0% | |
| !! | GGCCCAATTCATGTTTTAAG+AGG | + | chr1_1:23910913-23910932 | Msa0014910:intron | 40.0% |
| ! | AATCACACTTCGTTCTGGAT+AGG | + | chr1_1:23911194-23911213 | Msa0014910:intron | 40.0% |
| !!! | TGGTTCTATCTGCTGGTTTT+AGG | + | chr1_1:23911219-23911238 | Msa0014910:intron | 40.0% |
| !! | GAAGAAGCCTTGTTAACTCT+TGG | + | chr1_1:23911241-23911260 | Msa0014910:intron | 40.0% |
| CATGTACCCAAGAGTTAACA+AGG | - | chr1_1:23911251-23911270 | None:intergenic | 40.0% | |
| AGATAGCTCCTTAGTTGTCA+AGG | + | chr1_1:23911452-23911471 | Msa0014910:CDS | 40.0% | |
| AGTTGTCAAGGAAATCTTCG+GGG | + | chr1_1:23911464-23911483 | Msa0014910:CDS | 40.0% | |
| CAGAGTATGCTCTCTATTCT+TGG | + | chr1_1:23911490-23911509 | Msa0014910:intron | 40.0% | |
| !! | ATACACACAACTTCTGAAGC+TGG | + | chr1_1:23911843-23911862 | Msa0014910:CDS | 40.0% |
| ACAATTCCAATGTGTAGAGC+AGG | + | chr1_1:23912063-23912082 | Msa0014910:three_prime_UTR | 40.0% | |
| CAATTCCAATGTGTAGAGCA+GGG | + | chr1_1:23912064-23912083 | Msa0014910:three_prime_UTR | 40.0% | |
| AAAAACCCTGCTCTACACAT+TGG | - | chr1_1:23912072-23912091 | None:intergenic | 40.0% | |
| ! | CATTTTCTCTAGTGTCCCAT+AGG | + | chr1_1:23912157-23912176 | Msa0014910:three_prime_UTR | 40.0% |
| ! | AGTGCTGTAGAGACACATTT+TGG | + | chr1_1:23912227-23912246 | Msa0014910:three_prime_UTR | 40.0% |
| GGATACTATGTGTGTTCGTT+TGG | + | chr1_1:23912263-23912282 | Msa0014910:three_prime_UTR | 40.0% | |
| !!! | GAGAGATTTTTGGTTGGGAG+AGG | - | chr1_1:23903258-23903277 | None:intergenic | 45.0% |
| ! | AGGGTTAGTGTTGTTCGAAG+AGG | - | chr1_1:23903397-23903416 | None:intergenic | 45.0% |
| CTGAACCGGTGAATTCAACA+AGG | - | chr1_1:23903503-23903522 | None:intergenic | 45.0% | |
| TCAGTTACACAAGCGATTCC+TGG | + | chr1_1:23903519-23903538 | Msa0014910:CDS | 45.0% | |
| AGAATCCACGGCAATGAAGT+GGG | - | chr1_1:23903558-23903577 | None:intergenic | 45.0% | |
| ! | GTATTGGCACACACTTCTGA+TGG | + | chr1_1:23903726-23903745 | Msa0014910:intron | 45.0% |
| CACATGTGTCAGTGTCATGT+CGG | - | chr1_1:23903772-23903791 | None:intergenic | 45.0% | |
| GTGGATGAGTTGTTGCAAAG+AGG | + | chr1_1:23903958-23903977 | Msa0014910:intron | 45.0% | |
| AGGCTATTGAGAACAAGGTG+AGG | + | chr1_1:23904010-23904029 | Msa0014910:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr1_1:23904178-23904197 | Msa0014910:intron | 45.0% | |
| GCGTACAATACACCAAATGG+GGG | + | chr1_1:23904181-23904200 | Msa0014910:intron | 45.0% | |
| CGTACAATACACCAAATGGG+GGG | + | chr1_1:23904182-23904201 | Msa0014910:intron | 45.0% | |
| !! | GGCTTTCTTTTTACGGGTTG+GGG | + | chr1_1:23904904-23904923 | Msa0014910:intron | 45.0% |
| ATCAGATGGCACATTTGCAC+AGG | - | chr1_1:23904984-23905003 | None:intergenic | 45.0% | |
| CTTCCAAACCAAAACCTGTC+TGG | - | chr1_1:23905033-23905052 | None:intergenic | 45.0% | |
| GCTACAACATCAGGGTTGAA+TGG | - | chr1_1:23905097-23905116 | None:intergenic | 45.0% | |
| CGAAGAATTGTGCGAGACAA+AGG | + | chr1_1:23905190-23905209 | Msa0014910:CDS | 45.0% | |
| ATTTGAGGAATCCTTGTGCG+TGG | + | chr1_1:23905244-23905263 | Msa0014910:intron | 45.0% | |
| TTGAACCATTAGGGTTGGGT+GGG | - | chr1_1:23905458-23905477 | None:intergenic | 45.0% | |
| TTTGAACCATTAGGGTTGGG+TGG | - | chr1_1:23905459-23905478 | None:intergenic | 45.0% | |
| !! | AGGAACTACTTTTCCCTCGA+AGG | - | chr1_1:23905534-23905553 | None:intergenic | 45.0% |
| CGAGGGAAAAGTAGTTCCTT+TGG | + | chr1_1:23905535-23905554 | Msa0014910:intron | 45.0% | |
| GACCCTTCAATGTTACCCAA+AGG | - | chr1_1:23905554-23905573 | None:intergenic | 45.0% | |
| TGGGTAACATTGAAGGGTCT+TGG | + | chr1_1:23905555-23905574 | Msa0014910:intron | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | + | chr1_1:23905649-23905668 | Msa0014910:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | + | chr1_1:23905651-23905670 | Msa0014910:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr1_1:23905651-23905670 | None:intergenic | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | - | chr1_1:23905649-23905668 | None:intergenic | 45.0% | |
| ! | CTAAGGGTGTGTTTGGATTG+AGG | - | chr1_1:23905870-23905889 | None:intergenic | 45.0% |
| CTCAATCCAAACACACCCTT+AGG | + | chr1_1:23905868-23905887 | Msa0014910:intron | 45.0% | |
| ! | ACAAACCCTAAGGGTGTGTT+TGG | - | chr1_1:23905877-23905896 | None:intergenic | 45.0% |
| !! | TATAAGGTTGGCTTGGTGGT+TGG | + | chr1_1:23906385-23906404 | Msa0014910:intron | 45.0% |
| !! | ATAAGGTTGGCTTGGTGGTT+GGG | + | chr1_1:23906386-23906405 | Msa0014910:intron | 45.0% |
| GTGGAGGAATTAAGAAGTGG+TGG | + | chr1_1:23906409-23906428 | Msa0014910:intron | 45.0% | |
| ! | AAGTGGTGGAGTGATTAGGA+GGG | + | chr1_1:23906423-23906442 | Msa0014910:intron | 45.0% |
| ! | AATAGCCTTGGACTTTGGCA+AGG | - | chr1_1:23906567-23906586 | None:intergenic | 45.0% |
| ! | GCATCAATAGCCTTGGACTT+TGG | - | chr1_1:23906572-23906591 | None:intergenic | 45.0% |
| ! | GCTTTTCTCAAAGAGGGAAG+GGG | - | chr1_1:23906615-23906634 | None:intergenic | 45.0% |
| ! | GGCTTTTCTCAAAGAGGGAA+GGG | - | chr1_1:23906616-23906635 | None:intergenic | 45.0% |
| ! | AGGCTTTTCTCAAAGAGGGA+AGG | - | chr1_1:23906617-23906636 | None:intergenic | 45.0% |
| ! | GCAGAGGCTTTTCTCAAAGA+GGG | - | chr1_1:23906621-23906640 | None:intergenic | 45.0% |
| ! | AGCAGAGGCTTTTCTCAAAG+AGG | - | chr1_1:23906622-23906641 | None:intergenic | 45.0% |
| ! | TTTAAGGCAGCCTGTGACAT+TGG | - | chr1_1:23906844-23906863 | None:intergenic | 45.0% |
| ! | TGTTCAGGCTCTCTTTGGAA+AGG | + | chr1_1:23907420-23907439 | Msa0014910:CDS | 45.0% |
| ! | AAGCCATAGGACTAGTGGTA+TGG | - | chr1_1:23907666-23907685 | None:intergenic | 45.0% |
| CTAACCAGTAGAGAGTCACA+AGG | + | chr1_1:23907874-23907893 | Msa0014910:intron | 45.0% | |
| GAGTTTCACTAAGAAACCGG+TGG | - | chr1_1:23907928-23907947 | None:intergenic | 45.0% | |
| GGTCAATAGCAGGTCAAAGT+GGG | + | chr1_1:23908095-23908114 | Msa0014910:intron | 45.0% | |
| ! | GGTCAAAGTGGGCACAATTT+TGG | + | chr1_1:23908106-23908125 | Msa0014910:intron | 45.0% |
| GCCCTTCACATAAAACCGTT+TGG | + | chr1_1:23908150-23908169 | Msa0014910:intron | 45.0% | |
| GATGGGAGAAGAGTGATTTC+AGG | - | chr1_1:23908202-23908221 | None:intergenic | 45.0% | |
| TGCTCATGAAGGAAGTAGAC+TGG | + | chr1_1:23908793-23908812 | Msa0014910:intron | 45.0% | |
| TGAAGGAAGTAGACTGGCAA+AGG | + | chr1_1:23908799-23908818 | Msa0014910:intron | 45.0% | |
| AAAAGGCCAAGGACTGAAGT+GGG | + | chr1_1:23908892-23908911 | Msa0014910:CDS | 45.0% | |
| !! | GCCAAGAAGGGTACTACAAA+AGG | + | chr1_1:23908928-23908947 | Msa0014910:CDS | 45.0% |
| ! | GCCTTTTGTAGTACCCTTCT+TGG | - | chr1_1:23909389-23909408 | None:intergenic | 45.0% |
| CGTTGAACGCAACTCCATTT+AGG | + | chr1_1:23909239-23909258 | Msa0014910:intron | 45.0% | |
| CCTGAGGTTACATTGGGAAA+AGG | - | chr1_1:23909342-23909361 | None:intergenic | 45.0% | |
| ! | CCTTTTCCCAATGTAACCTC+AGG | + | chr1_1:23909339-23909358 | Msa0014910:intron | 45.0% |
| ! | GCCTTTTGTAGTACCCTTCT+TGG | + | chr1_1:23909389-23909408 | Msa0014910:intron | 45.0% |
| !! | GCCAAGAAGGGTACTACAAA+AGG | - | chr1_1:23908928-23908947 | None:intergenic | 45.0% |
| AAAAGGCCAAGGACTGAAGT+GGG | - | chr1_1:23908892-23908911 | None:intergenic | 45.0% | |
| TGGTAAATGGGAAAAGGCCA+AGG | - | chr1_1:23909440-23909459 | None:intergenic | 45.0% | |
| AAACCATCCCTTCGTGACAT+AGG | - | chr1_1:23909729-23909748 | None:intergenic | 45.0% | |
| GGAAGCAACAGATTGAGCAT+TGG | + | chr1_1:23909764-23909783 | Msa0014910:intron | 45.0% | |
| ! | GAAGCGTTTGGAGAAAGCAT+TGG | - | chr1_1:23910168-23910187 | None:intergenic | 45.0% |
| CACCCCTAGTTGATCCATTA+TGG | - | chr1_1:23910289-23910308 | None:intergenic | 45.0% | |
| TATCATATCTTACCCCACCC+GGG | - | chr1_1:23910324-23910343 | None:intergenic | 45.0% | |
| ! | ATAAGCTTCCTACGCTGGTT+TGG | - | chr1_1:23910369-23910388 | None:intergenic | 45.0% |
| CAGTTAGACTCATCCAATGG+TGG | + | chr1_1:23910441-23910460 | Msa0014910:intron | 45.0% | |
| CCTGATCTAGTGAGTGATAC+GGG | - | chr1_1:23910526-23910545 | None:intergenic | 45.0% | |
| ! | AGGATGAGCTTTGTAGGAGT+TGG | + | chr1_1:23910596-23910615 | Msa0014910:intron | 45.0% |
| ! | GGATGAGCTTTGTAGGAGTT+GGG | + | chr1_1:23910597-23910616 | Msa0014910:intron | 45.0% |
| !! | CTAGGGGTGGACTGTATTTA+AGG | - | chr1_1:23910727-23910746 | None:intergenic | 45.0% |
| ACCCAAACACCATCATTAGG+CGG | - | chr1_1:23910750-23910769 | None:intergenic | 45.0% | |
| GCAACCCAAACACCATCATT+AGG | - | chr1_1:23910753-23910772 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr1_1:23910787-23910806 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | + | chr1_1:23910785-23910804 | Msa0014910:intron | 45.0% | |
| ! | ACCCAACACAATGAAGGTGT+TGG | - | chr1_1:23910790-23910809 | None:intergenic | 45.0% |
| CCTAACACCCAACACAATGA+AGG | - | chr1_1:23910796-23910815 | None:intergenic | 45.0% | |
| CCTTCATTGTGTTGGGTGTT+AGG | + | chr1_1:23910793-23910812 | Msa0014910:intron | 45.0% | |
| TCATTGTGTTGGGTGTTAGG+GGG | + | chr1_1:23910796-23910815 | Msa0014910:intron | 45.0% | |
| ATCTTCATGGTCACCTCTAC+AGG | - | chr1_1:23910952-23910971 | None:intergenic | 45.0% | |
| TGTAGAGGTGACCATGAAGA+TGG | + | chr1_1:23910951-23910970 | Msa0014910:intron | 45.0% | |
| ! | ATAGGAGTGGTTCTATCTGC+TGG | + | chr1_1:23911212-23911231 | Msa0014910:intron | 45.0% |
| CCATCTTCTCAAGCGAATCT+AGG | - | chr1_1:23911872-23911891 | None:intergenic | 45.0% | |
| CCTAGATTCGCTTGAGAAGA+TGG | + | chr1_1:23911869-23911888 | Msa0014910:CDS | 45.0% | |
| TAGTGAGGCTTCATGATGCT+TGG | + | chr1_1:23911917-23911936 | Msa0014910:exon | 45.0% | |
| TGCGTACTTCAGCTTTCTCT+TGG | + | chr1_1:23912116-23912135 | Msa0014910:three_prime_UTR | 45.0% | |
| !! | GCTGTTAAAGACTGGCCTAT+GGG | - | chr1_1:23912175-23912194 | None:intergenic | 45.0% |
| !! | TGCTGTTAAAGACTGGCCTA+TGG | - | chr1_1:23912176-23912195 | None:intergenic | 45.0% |
| GAGAATCCACGGCAATGAAG+TGG | - | chr1_1:23903559-23903578 | None:intergenic | 50.0% | |
| GCTGTTCCGCTTGGTTATCT+AGG | + | chr1_1:23903579-23903598 | Msa0014910:CDS | 50.0% | |
| AATTTACGGCGCTGCGCTTT+GGG | - | chr1_1:23903654-23903673 | None:intergenic | 50.0% | |
| TGCAATGCTGTGTAAGTCGG+TGG | + | chr1_1:23903939-23903958 | Msa0014910:intron | 50.0% | |
| ATGCTATGAGGGGGTAACCT+TGG | + | chr1_1:23904069-23904088 | Msa0014910:intron | 50.0% | |
| GTATTGTACGCAGCCTTACC+CGG | - | chr1_1:23904172-23904191 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | + | chr1_1:23905655-23905674 | Msa0014910:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | + | chr1_1:23905656-23905675 | Msa0014910:intron | 50.0% | |
| TTGAGGGTTTAGGAGGGGAA+GGG | - | chr1_1:23905656-23905675 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | - | chr1_1:23905655-23905674 | None:intergenic | 50.0% | |
| !! | TAAGGTTGGCTTGGTGGTTG+GGG | + | chr1_1:23906387-23906406 | Msa0014910:intron | 50.0% |
| GGGGTGGAGGAATTAAGAAG+TGG | + | chr1_1:23906406-23906425 | Msa0014910:intron | 50.0% | |
| ! | GAAGTGGTGGAGTGATTAGG+AGG | + | chr1_1:23906422-23906441 | Msa0014910:intron | 50.0% |
| TGGAGTGATTAGGAGGGAGA+GGG | + | chr1_1:23906429-23906448 | Msa0014910:intron | 50.0% | |
| TATTACAATGGGGTGGGGTG+GGG | - | chr1_1:23906461-23906480 | None:intergenic | 50.0% | |
| GTATTACAATGGGGTGGGGT+GGG | - | chr1_1:23906462-23906481 | None:intergenic | 50.0% | |
| AGTATTACAATGGGGTGGGG+TGG | - | chr1_1:23906463-23906482 | None:intergenic | 50.0% | |
| TACCACTACGGATCTAGCAG+AGG | - | chr1_1:23906637-23906656 | None:intergenic | 50.0% | |
| AAGGCTGTAGAATCCCTGCA+AGG | + | chr1_1:23906792-23906811 | Msa0014910:intron | 50.0% | |
| CTAGCTGTTCAGGCTCTCTT+TGG | + | chr1_1:23907415-23907434 | Msa0014910:CDS | 50.0% | |
| TCTGCCTTGTGACTCTCTAC+TGG | - | chr1_1:23907881-23907900 | None:intergenic | 50.0% | |
| TTTGGAGAAAGCGGGTGAAG+TGG | + | chr1_1:23908050-23908069 | Msa0014910:intron | 50.0% | |
| TTGGAGAAAGCGGGTGAAGT+GGG | + | chr1_1:23908051-23908070 | Msa0014910:intron | 50.0% | |
| GGGTCAATAGCAGGTCAAAG+TGG | + | chr1_1:23908094-23908113 | Msa0014910:intron | 50.0% | |
| !! | GGCTGTGTGTTGCTTCTGAT+GGG | - | chr1_1:23908219-23908238 | None:intergenic | 50.0% |
| AGCATGCAAAAAGACACCGG+AGG | + | chr1_1:23908761-23908780 | Msa0014910:intron | 50.0% | |
| ATGCAAAAAGACACCGGAGG+AGG | + | chr1_1:23908764-23908783 | Msa0014910:intron | 50.0% | |
| ATGAGCAGTTTCACCTCCTC+CGG | - | chr1_1:23908780-23908799 | None:intergenic | 50.0% | |
| GGAGGTGAAACTGCTCATGA+AGG | + | chr1_1:23908782-23908801 | Msa0014910:intron | 50.0% | |
| GGGTAAATGGGAAAAGGCCA+AGG | + | chr1_1:23908881-23908900 | Msa0014910:CDS | 50.0% | |
| GAAAAGGCCAAGGACTGAAG+TGG | + | chr1_1:23908891-23908910 | Msa0014910:CDS | 50.0% | |
| AAAGGCCAAGGACTGAAGTG+GGG | + | chr1_1:23908893-23908912 | Msa0014910:CDS | 50.0% | |
| ATACTCCCCACTTCAGTCCT+TGG | - | chr1_1:23909420-23909439 | None:intergenic | 50.0% | |
| !! | GACTGAAGTGGGGAGTATTC+TGG | + | chr1_1:23908903-23908922 | Msa0014910:CDS | 50.0% |
| AGTATTCTGGCCGCCAAGAA+GGG | + | chr1_1:23908916-23908935 | Msa0014910:CDS | 50.0% | |
| GGGTACTACAAAAGGCCCAT+TGG | + | chr1_1:23908936-23908955 | Msa0014910:CDS | 50.0% | |
| GGGTACTACAAAAGGCCCAT+TGG | - | chr1_1:23908936-23908955 | None:intergenic | 50.0% | |
| AGTATTCCGGCTGCCAAGAA+GGG | - | chr1_1:23909405-23909424 | None:intergenic | 50.0% | |
| !! | GACTGAAGTGGGGAGTATTC+CGG | - | chr1_1:23908903-23908922 | None:intergenic | 50.0% |
| ATACTCCCCACTTCAGTCCT+TGG | + | chr1_1:23909420-23909439 | Msa0014910:intron | 50.0% | |
| AAAGGCCAAGGACTGAAGTG+GGG | - | chr1_1:23908893-23908912 | None:intergenic | 50.0% | |
| GAAAAGGCCAAGGACTGAAG+TGG | - | chr1_1:23908891-23908910 | None:intergenic | 50.0% | |
| TTGCAAAAAGACACCGGAGG+AGG | - | chr1_1:23909574-23909593 | None:intergenic | 50.0% | |
| AGCTTGCAAAAAGACACCGG+AGG | - | chr1_1:23909577-23909596 | None:intergenic | 50.0% | |
| CATCCCTTCGTGACATAGGA+TGG | - | chr1_1:23909725-23909744 | None:intergenic | 50.0% | |
| CATCCTATGTCACGAAGGGA+TGG | + | chr1_1:23909723-23909742 | Msa0014910:intron | 50.0% | |
| !! | CGTTTGGAGAAAGCATTGGG+TGG | - | chr1_1:23910164-23910183 | None:intergenic | 50.0% |
| ! | TGTAGCGCTGCGTTGCATTT+TGG | + | chr1_1:23910192-23910211 | Msa0014910:intron | 50.0% |
| !! | CTGGTTTGGTTACCTGCAAG+AGG | - | chr1_1:23910355-23910374 | None:intergenic | 50.0% |
| AGCCGAAGATCTTCCACCAT+TGG | - | chr1_1:23910457-23910476 | None:intergenic | 50.0% | |
| CCCGTATCACTCACTAGATC+AGG | + | chr1_1:23910523-23910542 | Msa0014910:intron | 50.0% | |
| ACACCATCATTAGGCGGCTA+GGG | - | chr1_1:23910744-23910763 | None:intergenic | 50.0% | |
| AACACCATCATTAGGCGGCT+AGG | - | chr1_1:23910745-23910764 | None:intergenic | 50.0% | |
| ! | AGCCGCCTAATGATGGTGTT+TGG | + | chr1_1:23910745-23910764 | Msa0014910:intron | 50.0% |
| ! | GCCGCCTAATGATGGTGTTT+GGG | + | chr1_1:23910746-23910765 | Msa0014910:intron | 50.0% |
| ! | GCTGGCCTCACCTTACAAAT+TGG | + | chr1_1:23910883-23910902 | Msa0014910:intron | 50.0% |
| ACATGTGCGAAGACCTGTAG+AGG | + | chr1_1:23910936-23910955 | Msa0014910:intron | 50.0% | |
| AGAGGTGACCATGAAGATGG+TGG | + | chr1_1:23910954-23910973 | Msa0014910:intron | 50.0% | |
| ! | CACTTCGTTCTGGATAGGAG+TGG | + | chr1_1:23911199-23911218 | Msa0014910:intron | 50.0% |
| TTGAACAGAACTCTGGCAGC+TGG | - | chr1_1:23911431-23911450 | None:intergenic | 50.0% | |
| GTTGCTCAGCATCATCACTG+AGG | - | chr1_1:23911818-23911837 | None:intergenic | 50.0% | |
| AATGAAGTGGGACCCACTCG+TGG | - | chr1_1:23903546-23903565 | None:intergenic | 55.0% | |
| AGCGGAACAGCGAGAATCCA+CGG | - | chr1_1:23903570-23903589 | None:intergenic | 55.0% | |
| TGGATTCTCGCTGTTCCGCT+TGG | + | chr1_1:23903570-23903589 | Msa0014910:CDS | 55.0% | |
| CAATTTACGGCGCTGCGCTT+TGG | - | chr1_1:23903655-23903674 | None:intergenic | 55.0% | |
| CAAAGCGCAGCGCCGTAAAT+TGG | + | chr1_1:23903653-23903672 | Msa0014910:intron | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr1_1:23904221-23904240 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr1_1:23904222-23904241 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr1_1:23904226-23904245 | Msa0014910:intron | 55.0% |
| !! | ATTAGGGTTGGGTGGGCTAG+TGG | - | chr1_1:23905451-23905470 | None:intergenic | 55.0% |
| ACTAGCCCACCCAACCCTAA+TGG | + | chr1_1:23905450-23905469 | Msa0014910:intron | 55.0% | |
| GTGGAGTGATTAGGAGGGAG+AGG | + | chr1_1:23906428-23906447 | Msa0014910:intron | 55.0% | |
| TGCCACCTTGCCAAAGTCCA+AGG | + | chr1_1:23906559-23906578 | Msa0014910:intron | 55.0% | |
| AGCCTTGGACTTTGGCAAGG+TGG | - | chr1_1:23906564-23906583 | None:intergenic | 55.0% | |
| AGGGAAGGGGTTCAGTTGCA+TGG | - | chr1_1:23906602-23906621 | None:intergenic | 55.0% | |
| AGCCTCTGCTAGATCCGTAG+TGG | + | chr1_1:23906632-23906651 | Msa0014910:intron | 55.0% | |
| GTTAATAGCGGCCGCTATCG+CGG | + | chr1_1:23907975-23907994 | Msa0014910:intron | 55.0% | |
| AGCGATGCACCGCTACAAAG+CGG | + | chr1_1:23908023-23908042 | Msa0014910:intron | 55.0% | |
| CCAAACGCTCCGCTTTGTAG+CGG | - | chr1_1:23908035-23908054 | None:intergenic | 55.0% | |
| ! | AGCGGAGCGTTTGGAGAAAG+CGG | + | chr1_1:23908041-23908060 | Msa0014910:intron | 55.0% |
| !! | GGTGAAGTGGGTGCTATTGG+TGG | + | chr1_1:23908063-23908082 | Msa0014910:intron | 55.0% |
| !! | AGTGGGTGCTATTGGTGGAG+CGG | + | chr1_1:23908068-23908087 | Msa0014910:intron | 55.0% |
| !! | CGGCTGTGTGTTGCTTCTGA+TGG | - | chr1_1:23908220-23908239 | None:intergenic | 55.0% |
| GAGTATTCTGGCCGCCAAGA+AGG | + | chr1_1:23908915-23908934 | Msa0014910:CDS | 55.0% | |
| GTAGTACCCTTCTTGGCAGC+CGG | + | chr1_1:23909396-23909415 | Msa0014910:intron | 55.0% | |
| GAGTATTCCGGCTGCCAAGA+AGG | - | chr1_1:23909406-23909425 | None:intergenic | 55.0% | |
| GGTCAAAGCGGGCGCAATTT+GGG | - | chr1_1:23910137-23910156 | None:intergenic | 55.0% | |
| !! | GAGAAAGCATTGGGTGGAGC+GGG | - | chr1_1:23910158-23910177 | None:intergenic | 55.0% |
| !! | GGAGAAAGCATTGGGTGGAG+CGG | - | chr1_1:23910159-23910178 | None:intergenic | 55.0% |
| ! | GCGCTACAAAGCGAAGCGTT+TGG | - | chr1_1:23910180-23910199 | None:intergenic | 55.0% |
| GATATCAAGCGGCCTCTTGC+AGG | + | chr1_1:23910340-23910359 | Msa0014910:intron | 55.0% | |
| GCAGGTAACCAAACCAGCGT+AGG | + | chr1_1:23910358-23910377 | Msa0014910:intron | 55.0% | |
| CTTTGTAGGAGTTGGGCGAG+AGG | + | chr1_1:23910604-23910623 | Msa0014910:intron | 55.0% | |
| CACCATCATTAGGCGGCTAG+GGG | - | chr1_1:23910743-23910762 | None:intergenic | 55.0% | |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | - | chr1_1:23910775-23910794 | None:intergenic | 55.0% |
| AGCGATTCCTGGTCCACGAG+TGG | + | chr1_1:23903530-23903549 | Msa0014910:CDS | 60.0% | |
| GCGATTCCTGGTCCACGAGT+GGG | + | chr1_1:23903531-23903550 | Msa0014910:CDS | 60.0% | |
| TGGGTCCCACTTCATTGCCG+TGG | + | chr1_1:23903550-23903569 | Msa0014910:CDS | 60.0% | |
| ! | GGGGGTAACCTTGGTGCAAC+TGG | + | chr1_1:23904078-23904097 | Msa0014910:intron | 60.0% |
| CATACGCAGGGTCTGGGAAG+GGG | - | chr1_1:23904209-23904228 | None:intergenic | 60.0% | |
| GCATACGCAGGGTCTGGGAA+GGG | - | chr1_1:23904210-23904229 | None:intergenic | 60.0% | |
| CTTCCCAGACCCTGCGTATG+CGG | + | chr1_1:23904209-23904228 | Msa0014910:intron | 60.0% | |
| TTCCCAGACCCTGCGTATGC+GGG | + | chr1_1:23904210-23904229 | Msa0014910:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr1_1:23904227-23904246 | Msa0014910:intron | 60.0% |
| !! | GTGGGCTAGTGGAGTAGTGG+TGG | - | chr1_1:23905440-23905459 | None:intergenic | 60.0% |
| !! | TGGGTGGGCTAGTGGAGTAG+TGG | - | chr1_1:23905443-23905462 | None:intergenic | 60.0% |
| AGGGTTTAGGAGGGGAAGGG+AGG | + | chr1_1:23905659-23905678 | Msa0014910:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | + | chr1_1:23905660-23905679 | Msa0014910:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | + | chr1_1:23905661-23905680 | Msa0014910:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr1_1:23905661-23905680 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr1_1:23905660-23905679 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr1_1:23905659-23905678 | None:intergenic | 60.0% | |
| ! | CCGCTACAAAGCGGAGCGTT+TGG | + | chr1_1:23908032-23908051 | Msa0014910:intron | 60.0% |
| ! | GCGGAGCGTTTGGAGAAAGC+GGG | + | chr1_1:23908042-23908061 | Msa0014910:intron | 60.0% |
| ! | GCGGGTGAAGTGGGTGCTAT+TGG | + | chr1_1:23908060-23908079 | Msa0014910:intron | 60.0% |
| ! | GTGCTATTGGTGGAGCGGAG+CGG | + | chr1_1:23908073-23908092 | Msa0014910:intron | 60.0% |
| TGCTATTGGTGGAGCGGAGC+GGG | + | chr1_1:23908074-23908093 | Msa0014910:intron | 60.0% | |
| GGGTCAAAGCGGGCGCAATT+TGG | - | chr1_1:23910138-23910157 | None:intergenic | 60.0% | |
| TTGGGTGGAGCGGGTCAAAG+CGG | - | chr1_1:23910149-23910168 | None:intergenic | 60.0% | |
| ATCGCTATCGCAGCGCAGAG+CGG | - | chr1_1:23910218-23910237 | None:intergenic | 60.0% | |
| CATATCTTACCCCACCCGGG+TGG | - | chr1_1:23910321-23910340 | None:intergenic | 60.0% | |
| CATCATTAGGCGGCTAGGGG+TGG | - | chr1_1:23910740-23910759 | None:intergenic | 60.0% | |
| CACCCCTAGCCGCCTAATGA+TGG | + | chr1_1:23910738-23910757 | Msa0014910:intron | 60.0% | |
| TGGGAAGGGGTCCCCCCATT+TGG | - | chr1_1:23904196-23904215 | None:intergenic | 65.0% | |
| CGCATACGCAGGGTCTGGGA+AGG | - | chr1_1:23904211-23904230 | None:intergenic | 65.0% | |
| CTCCCGCATACGCAGGGTCT+GGG | - | chr1_1:23904215-23904234 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr1_1:23905664-23905683 | Msa0014910:intron | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr1_1:23905665-23905684 | Msa0014910:intron | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr1_1:23905665-23905684 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr1_1:23905664-23905683 | None:intergenic | 65.0% | |
| !! | GGTTGGCTTGGTGGTTGGGG+TGG | + | chr1_1:23906390-23906409 | Msa0014910:intron | 65.0% |
| !! | TGGCTTGGTGGTTGGGGTGG+AGG | + | chr1_1:23906393-23906412 | Msa0014910:intron | 65.0% |
| GAGCGGAGCGGGTCAATAGC+AGG | + | chr1_1:23908085-23908104 | Msa0014910:intron | 65.0% | |
| TGGGTGGAGCGGGTCAAAGC+GGG | - | chr1_1:23910148-23910167 | None:intergenic | 65.0% | |
| GTGGGACCCACTCGTGGACC+AGG | - | chr1_1:23903540-23903559 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+TGG | - | chr1_1:23904216-23904235 | None:intergenic | 70.0% | |
| GCCACTCTGCGCCGCGATAG+CGG | - | chr1_1:23907989-23908008 | None:intergenic | 70.0% | |
| GGGGTGACGCAGAAGCCACC+CGG | + | chr1_1:23910303-23910322 | Msa0014910:intron | 70.0% | |
| GGGTGACGCAGAAGCCACCC+GGG | + | chr1_1:23910304-23910323 | Msa0014910:intron | 70.0% | |
| TGACGCAGAAGCCACCCGGG+TGG | + | chr1_1:23910307-23910326 | Msa0014910:intron | 70.0% | |
| GACGCAGAAGCCACCCGGGT+GGG | + | chr1_1:23910308-23910327 | Msa0014910:intron | 70.0% | |
| ACGCAGAAGCCACCCGGGTG+GGG | + | chr1_1:23910309-23910328 | Msa0014910:intron | 70.0% | |
| GCCGCTATCGCGGCGCAGAG+TGG | + | chr1_1:23907985-23908004 | Msa0014910:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 23903216 | 23912332 | 23903216 | ID=Msa0014910;Name=Msa0014910 |
| chr1_1 | mRNA | 23903216 | 23912332 | 23903216 | ID=Msa0014910-mRNA-1;Parent=Msa0014910;Name=Msa0014910-mRNA-1;_AED=0.17;_eAED=0.20;_QI=0|0.6|0.66|1|1|1|6|400|331 |
| chr1_1 | exon | 23903216 | 23903632 | 23903216 | ID=Msa0014910-mRNA-1:exon:8275;Parent=Msa0014910-mRNA-1 |
| chr1_1 | exon | 23905034 | 23905211 | 23905034 | ID=Msa0014910-mRNA-1:exon:8276;Parent=Msa0014910-mRNA-1 |
| chr1_1 | exon | 23907362 | 23907459 | 23907362 | ID=Msa0014910-mRNA-1:exon:8277;Parent=Msa0014910-mRNA-1 |
| chr1_1 | exon | 23908856 | 23908984 | 23908856 | ID=Msa0014910-mRNA-1:exon:8278;Parent=Msa0014910-mRNA-1 |
| chr1_1 | exon | 23911432 | 23911493 | 23911432 | ID=Msa0014910-mRNA-1:exon:8279;Parent=Msa0014910-mRNA-1 |
| chr1_1 | exon | 23911821 | 23912332 | 23911821 | ID=Msa0014910-mRNA-1:exon:8280;Parent=Msa0014910-mRNA-1 |
| chr1_1 | CDS | 23903216 | 23903632 | 23903216 | ID=Msa0014910-mRNA-1:cds;Parent=Msa0014910-mRNA-1 |
| chr1_1 | CDS | 23905034 | 23905211 | 23905034 | ID=Msa0014910-mRNA-1:cds;Parent=Msa0014910-mRNA-1 |
| chr1_1 | CDS | 23907362 | 23907459 | 23907362 | ID=Msa0014910-mRNA-1:cds;Parent=Msa0014910-mRNA-1 |
| chr1_1 | CDS | 23908856 | 23908984 | 23908856 | ID=Msa0014910-mRNA-1:cds;Parent=Msa0014910-mRNA-1 |
| chr1_1 | CDS | 23911432 | 23911493 | 23911432 | ID=Msa0014910-mRNA-1:cds;Parent=Msa0014910-mRNA-1 |
| chr1_1 | CDS | 23911821 | 23911932 | 23911821 | ID=Msa0014910-mRNA-1:cds;Parent=Msa0014910-mRNA-1 |
| chr1_1 | three_prime_UTR | 23911933 | 23912332 | 23911933 | ID=Msa0014910-mRNA-1:three_prime_utr;Parent=Msa0014910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
