AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0965960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0965960 MtrunA17_Chr6g0486531 97.516 322 8 0 1 322 733 1054 0.0 633
Msa0965960 MtrunA17_Chr6g0486531 65.844 243 72 3 83 318 571 809 9.84e-99 313
Msa0965960 MtrunA17_Chr2g0299581 76.163 172 25 3 152 322 34 190 2.65e-80 242
Msa0965960 MtrunA17_Chr2g0299581 64.474 76 26 1 2 77 112 186 1.76e-24 98.2
Msa0965960 MtrunA17_Chr6g0484381 75.301 166 12 1 149 314 36 172 4.68e-79 238
Msa0965960 MtrunA17_Chr6g0484381 70.423 71 21 0 1 71 100 170 6.48e-27 104
Msa0965960 MtrunA17_Chr6g0486321 68.852 183 27 1 112 294 34 186 1.19e-74 228
Msa0965960 MtrunA17_Chr6g0486321 62.963 54 20 0 1 54 134 187 8.27e-16 74.7
Msa0965960 MtrunA17_Chr6g0486241 57.732 194 27 3 112 305 38 176 1.96e-57 184
Msa0965960 MtrunA17_Chr6g0486461 83.505 97 16 0 214 310 7 103 1.74e-49 160
Msa0965960 MtrunA17_Chr6g0486461 66.667 69 23 0 1 69 35 103 5.03e-26 99.8
Msa0965960 MtrunA17_Chr6g0486491 76.852 108 11 1 135 242 1 94 7.19e-49 158
Msa0965960 MtrunA17_Chr6g0460441 52.866 157 53 1 111 267 6 141 6.31e-46 152
Msa0965960 MtrunA17_Chr6g0486211 88.235 68 8 0 112 179 13 80 2.52e-33 118
Msa0965960 MtrunA17_Chr6g0477831 56.250 80 35 0 161 240 11 90 6.96e-25 96.3
Msa0965960 MtrunA17_Chr6g0486281 95.745 47 2 0 213 259 1 47 6.17e-24 92.4
Msa0965960 MtrunA17_Chr2g0299591 89.796 49 5 0 111 159 14 62 2.63e-23 91.3
Msa0965960 MtrunA17_Chr6g0486291 84.314 51 8 0 59 109 1 51 1.63e-22 89.0
Msa0965960 MtrunA17_Chr6g0486301 53.659 82 28 1 178 259 1033 1104 1.71e-21 95.5
Msa0965960 MtrunA17_Chr6g0477841 84.444 45 7 0 47 91 1 45 6.22e-18 76.6
Msa0965960 MtrunA17_Chr6g0448841 48.387 93 47 1 122 214 31 122 2.49e-17 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0965960 AT4G29060.1 79.808 312 60 1 1 312 643 951 2.69e-158 467
Msa0965960 AT4G29060.1 68.067 238 74 1 83 318 482 719 1.18e-102 322
Msa0965960 AT4G29060.2 70.690 232 60 2 83 312 482 707 1.30e-104 321
Msa0965960 AT4G29060.2 73.239 71 19 0 1 71 637 707 2.84e-27 112
Msa0965960 AT4G11120.1 50.538 93 43 2 121 213 76 165 5.43e-17 81.3

Find 249 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCAGTGGCAGGACTTTC+AGG 0.148977 6_3:-93904020 None:intergenic
CCTGTTGCCAATGAAGTTTC+TGG 0.152029 6_3:+93902336 Msa0965960:five_prime_UTR
TCCGACAGAGCATGATATTA+TGG 0.209544 6_3:-93902076 None:intergenic
CATTTATAATACTTCCTTCT+TGG 0.224050 6_3:-93903262 None:intergenic
TTCCGTTTCTGTGGCTGATA+TGG 0.247171 6_3:-93902289 None:intergenic
TTCAATTGCAAGTTTCATTA+AGG 0.260014 6_3:+93907157 Msa0965960:three_prime_UTR
GTTATTCTTTCTTGTCAAAT+AGG 0.268125 6_3:-93902124 None:intergenic
TTCCTTCGTCACAATAGTTT+CGG 0.269335 6_3:-93906653 None:intergenic
CTTCGAAACCCGAGAACATT+AGG 0.279500 6_3:+93906707 Msa0965960:CDS
GATAATGGGAAAATCTTCTT+TGG 0.285488 6_3:+93902953 Msa0965960:five_prime_UTR
GAGGAAGATGACGATGGATT+TGG 0.287722 6_3:+93902927 Msa0965960:five_prime_UTR
ACACTGTCATCCTTAATAAA+AGG 0.290111 6_3:-93906790 None:intergenic
GCAAGCATACCTCAGGAAAA+AGG 0.290284 6_3:+93906417 Msa0965960:CDS
TCCTTCAGCTGCCAGTCTTC+CGG 0.299109 6_3:-93906464 None:intergenic
CGATGGATTTGGGAAGATAA+TGG 0.301730 6_3:+93902938 Msa0965960:five_prime_UTR
ACCAAATCCTCATTCTTTAC+AGG 0.301884 6_3:-93902474 None:intergenic
CCGACAGAGCATGATATTAT+GGG 0.306224 6_3:-93902075 None:intergenic
CCTTGCAGGTCTTGAACGTT+TGG 0.306637 6_3:-93902436 None:intergenic
AACAGCTCCTTCCTTCTTCA+TGG 0.308813 6_3:-93903036 None:intergenic
TTTGGTGCGTTTGTTGATTT+CGG 0.315228 6_3:+93902540 Msa0965960:five_prime_UTR
TCTTTCCTTGGACCCGATTT+CGG 0.321232 6_3:-93902786 None:intergenic
CAGTAACAACATACTCTACT+TGG 0.337840 6_3:-93904965 None:intergenic
TGACAGCAGGATCGGTGTTT+TGG 0.339026 6_3:+93904851 Msa0965960:five_prime_UTR
TCCTGTAAAGAATGAGGATT+TGG 0.339661 6_3:+93902473 Msa0965960:five_prime_UTR
GGAAGGAGCTGTTGCAGAAT+TGG 0.340077 6_3:+93903046 Msa0965960:five_prime_UTR
GTTCAACCTCGGAGAGGGTT+TGG 0.342209 6_3:+93905228 Msa0965960:CDS
CAAGAAGGAAGTATTATAAA+TGG 0.345251 6_3:+93903263 Msa0965960:five_prime_UTR
GTCTCAAGTGTTGTGTCTCT+TGG 0.346040 6_3:+93902621 Msa0965960:five_prime_UTR
GGAAAATCTTCTTTGGAGAT+TGG 0.353117 6_3:+93902960 Msa0965960:five_prime_UTR
AAGAATGAGGATTTGGTTCC+CGG 0.354645 6_3:+93902480 Msa0965960:five_prime_UTR
GGAAATTCTTCGGTTATTCC+TGG 0.356752 6_3:+93902096 Msa0965960:five_prime_UTR
CACAAAATTTGTTGTAGGTC+AGG 0.358049 6_3:+93902818 Msa0965960:five_prime_UTR
TCCTTCGTCACAATAGTTTC+GGG 0.358591 6_3:-93906652 None:intergenic
CTTGTTCCAACTTCATTTGA+AGG 0.363120 6_3:-93902366 None:intergenic
TCTTTCACTGGAGTAGTTAC+CGG 0.365022 6_3:-93905304 None:intergenic
ATCTCTGATTCTGTAACAAC+AGG 0.365365 6_3:-93903575 None:intergenic
AGAGGCGGTTGCTGAAAGTT+TGG 0.370006 6_3:+93903304 Msa0965960:five_prime_UTR
TCTAAGGAGCTCTTGTGCTT+TGG 0.371836 6_3:-93904754 None:intergenic
TCCTTGGCTTCTGCGGCAGC+AGG 0.372285 6_3:-93905331 None:intergenic
CACTTTATCATTCTTGATGT+AGG 0.372974 6_3:-93905134 None:intergenic
AGGAAGATGACGATGGATTT+GGG 0.384366 6_3:+93902928 Msa0965960:five_prime_UTR
AAGCAGACAATTGCAACTAT+TGG 0.386183 6_3:+93905175 Msa0965960:CDS
CCTTCCTTCGGCAGTTGCTC+TGG 0.387279 6_3:-93904811 None:intergenic
TCTTCAACTTGTGCTGATAC+AGG 0.393393 6_3:-93904059 None:intergenic
ATGCGTGAAAACACTGATAC+TGG 0.393930 6_3:+93902705 Msa0965960:five_prime_UTR
CTACGAAAAGCCAATACAAA+AGG 0.395148 6_3:-93903110 None:intergenic
TATGTTTCTGAAGGTGATAC+AGG 0.401537 6_3:+93901999 Msa0965960:five_prime_UTR
GAGGTGGGATTCTCCGAAAT+CGG 0.402919 6_3:+93902773 Msa0965960:five_prime_UTR
TAAAGTGACAGTAAAGGATA+TGG 0.403790 6_3:+93905150 Msa0965960:CDS
CCTTTATTCAAGCTTTCCTC+AGG 0.405283 6_3:-93903847 None:intergenic
ACTTTATCATTCTTGATGTA+GGG 0.407592 6_3:-93905133 None:intergenic
TTCAGGAGAGGGAAGTTGAT+TGG 0.408068 6_3:-93904003 None:intergenic
CTGTACCAGCATAGCTTACA+AGG 0.414442 6_3:+93906920 Msa0965960:exon
AGAAATCCTTCCTCTCCTTC+AGG 0.415362 6_3:-93902894 None:intergenic
AAGCAACTTCGGGACGAAAC+AGG 0.415386 6_3:+93904678 Msa0965960:five_prime_UTR
TGTTGTAGGTCAGGAGTTGC+AGG 0.415982 6_3:+93902827 Msa0965960:five_prime_UTR
TTTCCTTCATTTGTCGCCAA+TGG 0.416640 6_3:+93902213 Msa0965960:five_prime_UTR
TTACTTTGGTTCAGTCTCCT+TGG 0.419163 6_3:-93905347 None:intergenic
AGCACCTTATCTAACTCTAA+TGG 0.420649 6_3:+93904113 Msa0965960:five_prime_UTR
GATGGATTTGGGAAGATAAT+GGG 0.421467 6_3:+93902939 Msa0965960:five_prime_UTR
CTTTCATCAGCCACGTCAAC+CGG 0.421811 6_3:-93903416 None:intergenic
TCTTGCACCTCTTCAGTGGC+AGG 0.429761 6_3:-93904029 None:intergenic
ATTTGATCAGCCACTTCAAC+CGG 0.430618 6_3:-93903458 None:intergenic
AATGCAGAGAAATCCGGCTC+TGG 0.431146 6_3:+93902750 Msa0965960:five_prime_UTR
ACTCCTTGAAAAGTTGAGTC+TGG 0.432066 6_3:-93902154 None:intergenic
GTAAAATCTATCCAACCATT+TGG 0.434906 6_3:+93902522 Msa0965960:five_prime_UTR
AGAAATCCGGCTCTGGGAGG+TGG 0.435137 6_3:+93902757 Msa0965960:five_prime_UTR
TGCACAAACTACAGCAAAAC+CGG 0.435471 6_3:+93905285 Msa0965960:CDS
ATAATAACCAAATGTTGATT+AGG 0.436831 6_3:+93907029 Msa0965960:three_prime_UTR
CCTGGTGTTTCTTGAGGAGC+TGG 0.437084 6_3:-93903611 None:intergenic
TTCTTTCTTCACGAATTCCT+CGG 0.440757 6_3:-93904997 None:intergenic
TTAATCATTGATCTATTTGA+AGG 0.441487 6_3:+93907243 Msa0965960:three_prime_UTR
TTATAGTGAAAGACTTGGTT+AGG 0.442018 6_3:+93906812 Msa0965960:CDS
GCAGCAGGCTCCTCTTTCAC+TGG 0.443676 6_3:-93905316 None:intergenic
TCTAACTCTAATGGACAAAC+TGG 0.444131 6_3:+93904122 Msa0965960:five_prime_UTR
GAAAACCTTGTAAGCTATGC+TGG 0.445394 6_3:-93906925 None:intergenic
CCAGAAACTTCATTGGCAAC+AGG 0.445959 6_3:-93902336 None:intergenic
ACTCCATTGGCGACAAATGA+AGG 0.446283 6_3:-93902216 None:intergenic
TGATATTATGGGATTCATGT+TGG 0.448741 6_3:-93902064 None:intergenic
ACTGATCTGTATCTGTATTG+AGG 0.453212 6_3:+93907066 Msa0965960:three_prime_UTR
TCGTCATCTTCCTCAGCTAA+TGG 0.453821 6_3:-93902918 None:intergenic
GCCTGCTGCCGCAGAAGCCA+AGG 0.455636 6_3:+93905330 Msa0965960:CDS
ATGCTCTGTCGGAAATTCTT+CGG 0.455804 6_3:+93902086 Msa0965960:five_prime_UTR
TTCGAAACCCGAGAACATTA+GGG 0.457197 6_3:+93906708 Msa0965960:CDS
GGAAGAATCTCAAAGAGGTT+AGG 0.459157 6_3:+93906745 Msa0965960:CDS
AGGCAAAGTATAGCTGCTAT+TGG 0.460091 6_3:+93906832 Msa0965960:CDS
AGAAGATCTTGCGTCAAAAC+CGG 0.460563 6_3:+93905039 Msa0965960:CDS
GAATCTCCTTCAAATGAAGT+TGG 0.462432 6_3:+93902360 Msa0965960:five_prime_UTR
AGGTGGGATTCTCCGAAATC+GGG 0.464270 6_3:+93902774 Msa0965960:five_prime_UTR
AGATTCACCAGAAACTTCAT+TGG 0.465353 6_3:-93902343 None:intergenic
CCTGAGGAAAGCTTGAATAA+AGG 0.465580 6_3:+93903847 Msa0965960:five_prime_UTR
CGAAGTTGCTTCACAAGTGC+TGG 0.465644 6_3:-93904666 None:intergenic
AACTGCATCATTATCTTCCT+CGG 0.465955 6_3:-93903543 None:intergenic
GGCATTACTGCTTCAGATGA+AGG 0.466224 6_3:+93904143 Msa0965960:five_prime_UTR
TGAAAGTTACAAGGTTTGTT+CGG 0.466730 6_3:+93905206 Msa0965960:CDS
AGTAGTGGTCTCAGCCGCTT+TGG 0.466995 6_3:+93906309 Msa0965960:CDS
GTCCGCGCCTAATCAACATT+TGG 0.467669 6_3:-93907036 None:intergenic
AGAAACCGGTGCAGGGATGA+TGG 0.468491 6_3:+93906348 Msa0965960:CDS
CAGCACTTGTGAAGCAACTT+CGG 0.472018 6_3:+93904667 Msa0965960:five_prime_UTR
TGATAAGAAATCCGGAAGAC+TGG 0.475292 6_3:+93906453 Msa0965960:CDS
ATCCTTGATCTAATTTGCTC+CGG 0.478542 6_3:-93905058 None:intergenic
CGAAACAGGAGCTGGAATGA+TGG 0.479672 6_3:+93904692 Msa0965960:five_prime_UTR
ACAAGCGAATATGCTCTTAC+CGG 0.485263 6_3:+93902250 Msa0965960:five_prime_UTR
TGTTGATTTCGGAGCTTTCA+CGG 0.487404 6_3:+93902551 Msa0965960:five_prime_UTR
TCGAACAATGCAGAGAAATC+CGG 0.493006 6_3:+93902744 Msa0965960:five_prime_UTR
GTAAGAACCTATCCTTCCTT+CGG 0.495021 6_3:-93904823 None:intergenic
AACTGAAGGTGATCTTGAAA+AGG 0.495747 6_3:+93906393 Msa0965960:CDS
TTTCCCCGTAAAAGCTGCCC+CGG 0.497340 6_3:-93902499 None:intergenic
ATTAGATCAAGGATTGTTGA+AGG 0.498357 6_3:+93905067 Msa0965960:CDS
GCAAGTTGCTGCTTGTCCAC+AGG 0.499547 6_3:+93906603 Msa0965960:CDS
AGAAACTGTGGAAGATTCAC+TGG 0.500295 6_3:+93903202 Msa0965960:five_prime_UTR
GATAATGATGCAGTTGAGCC+TGG 0.500373 6_3:+93903551 Msa0965960:five_prime_UTR
ACTCTTTGCTTATAGTATGC+TGG 0.502490 6_3:+93907271 Msa0965960:three_prime_UTR
CGATTCCTCGACAACTGTTG+TGG 0.502643 6_3:+93903226 Msa0965960:five_prime_UTR
AAACACCGATCCTGCTGTCA+TGG 0.503436 6_3:-93904848 None:intergenic
TTCCATATCAGCCACAGAAA+CGG 0.506507 6_3:+93902287 Msa0965960:five_prime_UTR
TCTTTCTTCACGAATTCCTC+GGG 0.506603 6_3:-93904996 None:intergenic
CTCACTTCTGCCAACAAAGT+CGG 0.506846 6_3:-93906548 None:intergenic
CTTGTCAAATAGGCAACTCC+AGG 0.508349 6_3:-93902114 None:intergenic
TCATTGATCTATTTGAAGGT+AGG 0.519314 6_3:+93907247 Msa0965960:three_prime_UTR
TACGAAAAGCCAATACAAAA+GGG 0.522460 6_3:-93903109 None:intergenic
AAATCAACAAACGCACCAAA+TGG 0.523061 6_3:-93902537 None:intergenic
CCCATAATATCATGCTCTGT+CGG 0.523123 6_3:+93902075 Msa0965960:five_prime_UTR
GGCTTTCGTAGAACCAGTGT+TGG 0.523954 6_3:-93902415 None:intergenic
GATTCTGTAACAACAGGGCC+AGG 0.526402 6_3:-93903569 None:intergenic
AGTAACAACATACTCTACTT+GGG 0.527067 6_3:-93904964 None:intergenic
TGGCAGAAGTGAGAAATTCA+AGG 0.527151 6_3:+93906558 Msa0965960:CDS
AACCGGAGCAAATTAGATCA+AGG 0.527437 6_3:+93905056 Msa0965960:CDS
AAGTGAGAAATTCAAGGAGT+TGG 0.528224 6_3:+93906564 Msa0965960:CDS
TATAAATGGTGCCGCTGAGA+AGG 0.528405 6_3:+93903277 Msa0965960:five_prime_UTR
CCAGTGTTGGCATCAGACTT+AGG 0.528888 6_3:-93902402 None:intergenic
TCATCCGCTGATAAGAAATC+CGG 0.529747 6_3:+93906445 Msa0965960:CDS
AGCACTTGTGAAGCAACTTC+GGG 0.530877 6_3:+93904668 Msa0965960:five_prime_UTR
AGAATCCCACCTCCCAGAGC+CGG 0.531201 6_3:-93902763 None:intergenic
AACTGACTCACCGGTTGAAG+TGG 0.534688 6_3:+93903448 Msa0965960:five_prime_UTR
GTCTCTTGGACAAGAAGTTA+CGG 0.535794 6_3:+93902635 Msa0965960:five_prime_UTR
CTTTATTCAAGCTTTCCTCA+GGG 0.535989 6_3:-93903846 None:intergenic
TTGTCCATTAGAGTTAGATA+AGG 0.536309 6_3:-93904117 None:intergenic
TGTTCTCGGGTTTCGAAGCA+AGG 0.537039 6_3:-93906702 None:intergenic
TATTCTTCATATGTTTCTGA+AGG 0.539089 6_3:+93901990 Msa0965960:five_prime_UTR
CTACGAGAAGAAACCGGTGC+AGG 0.539828 6_3:+93906340 Msa0965960:CDS
CAACAAACGCACCAAATGGT+TGG 0.540062 6_3:-93902533 None:intergenic
TACATTCACGATGCACGCAT+TGG 0.540085 6_3:+93906499 Msa0965960:CDS
CAAGAACCTGGTGTTTCTTG+AGG 0.540517 6_3:-93903617 None:intergenic
GGGGCACGCAGCCACTTGCA+TGG 0.540689 6_3:-93904943 None:intergenic
AACTGTGAAACCGACTTTGT+TGG 0.542867 6_3:+93906538 Msa0965960:CDS
GAGAAAATATGAAAGTTACA+AGG 0.544236 6_3:+93905197 Msa0965960:CDS
AAGCAACTACGAGAAGAAAC+CGG 0.544505 6_3:+93906334 Msa0965960:CDS
CTGGCAGCTGAAGGAAGAAT+CGG 0.544679 6_3:+93906472 Msa0965960:CDS
CTTCGGGACGAAACAGGAGC+TGG 0.545385 6_3:+93904684 Msa0965960:five_prime_UTR
TCAGATGAAGGATCGAGTAA+AGG 0.545714 6_3:+93904155 Msa0965960:five_prime_UTR
AAAAGGCGCAAGCATACCTC+AGG 0.548541 6_3:+93906410 Msa0965960:CDS
CACGGATACTTCCGTTTCTG+TGG 0.549084 6_3:-93902298 None:intergenic
ATTTCTTATCAGCGGATGAG+AGG 0.549418 6_3:-93906441 None:intergenic
ATGCAGAGAAATCCGGCTCT+GGG 0.550324 6_3:+93902751 Msa0965960:five_prime_UTR
GTGGCAGGACTTTCAGGAGA+GGG 0.550624 6_3:-93904014 None:intergenic
GTTCGGTTCAACCTCGGAGA+GGG 0.551728 6_3:+93905223 Msa0965960:CDS
AGCGACATTGACCATGAAGA+AGG 0.553562 6_3:+93903025 Msa0965960:five_prime_UTR
GGTAACTACTCCAGTGAAAG+AGG 0.553754 6_3:+93905306 Msa0965960:CDS
GCAGCCAGAGCAACTGCCGA+AGG 0.554999 6_3:+93904807 Msa0965960:five_prime_UTR
ATCACCTTCAGTTTCAGCAA+GGG 0.556148 6_3:-93906383 None:intergenic
CAAGGAGTTCTTTAAGACAC+GGG 0.556289 6_3:+93902169 Msa0965960:five_prime_UTR
GGACAAGGCACTTGCACAAG+TGG 0.557097 6_3:+93903067 Msa0965960:five_prime_UTR
CCAGAGCAACTGCCGAAGGA+AGG 0.558061 6_3:+93904811 Msa0965960:five_prime_UTR
AACTGACTCACCGGTTGACG+TGG 0.558529 6_3:+93903406 Msa0965960:five_prime_UTR
TACATCCATGACAGCAGGAT+CGG 0.561063 6_3:+93904843 Msa0965960:five_prime_UTR
ATTCTCCGAAATCGGGTCCA+AGG 0.561858 6_3:+93902781 Msa0965960:five_prime_UTR
GTTCTTACATCCATGACAGC+AGG 0.562189 6_3:+93904838 Msa0965960:five_prime_UTR
GAATGATAAAGTGACAGTAA+AGG 0.564402 6_3:+93905144 Msa0965960:CDS
TGAAAGTCCTGCCACTGAAG+AGG 0.565352 6_3:+93904022 Msa0965960:five_prime_UTR
TTTAATAGAAACTGACTCAC+CGG 0.565786 6_3:+93903439 Msa0965960:five_prime_UTR
AGAATGAGGATTTGGTTCCC+GGG 0.569157 6_3:+93902481 Msa0965960:five_prime_UTR
GAAATCCGGCTCTGGGAGGT+GGG 0.570627 6_3:+93902758 Msa0965960:five_prime_UTR
TTGTTCTTGCACCTCTTCAG+TGG 0.570826 6_3:-93904033 None:intergenic
AGGTCAGGAGTTGCAGGGTA+CGG 0.571288 6_3:+93902833 Msa0965960:five_prime_UTR
GGATTGTTGAAGGACGGATA+AGG 0.572423 6_3:+93905077 Msa0965960:CDS
GATCAAGGATTGTTGAAGGA+CGG 0.572700 6_3:+93905071 Msa0965960:CDS
ACAGTCCATCATCCCTGCAC+CGG 0.573161 6_3:-93906353 None:intergenic
GTTGAGTGATAGCTTTGTAA+AGG 0.577562 6_3:+93902596 Msa0965960:five_prime_UTR
CAACGTTGAAACTGACTCAC+CGG 0.581016 6_3:+93903397 Msa0965960:five_prime_UTR
GCAACTGCCGAAGGAAGGAT+AGG 0.582552 6_3:+93904816 Msa0965960:five_prime_UTR
TCACTTCCTGAAGGAGAGGA+AGG 0.585290 6_3:+93902888 Msa0965960:five_prime_UTR
GTAACAACATACTCTACTTG+GGG 0.587126 6_3:-93904963 None:intergenic
TCCGGAAGACTGGCAGCTGA+AGG 0.588358 6_3:+93906463 Msa0965960:CDS
TATATCACTTCCTGAAGGAG+AGG 0.589228 6_3:+93902884 Msa0965960:five_prime_UTR
CCTAAGTCTGATGCCAACAC+TGG 0.589932 6_3:+93902402 Msa0965960:five_prime_UTR
GAGCATATTCGCTTGTTCTG+AGG 0.590286 6_3:-93902243 None:intergenic
GTGCAGGAAATCAGCAGTAG+TGG 0.596207 6_3:+93906294 Msa0965960:intron
GGGTTTGGAAAAGAAAAGCG+AGG 0.599000 6_3:+93905243 Msa0965960:CDS
GAATGAGGATTTGGTTCCCG+GGG 0.599120 6_3:+93902482 Msa0965960:five_prime_UTR
AATGCTCTTTCTGAAAGTGA+AGG 0.599535 6_3:+93904723 Msa0965960:five_prime_UTR
CAGTGTTATAGTGAAAGACT+TGG 0.599905 6_3:+93906807 Msa0965960:CDS
AGCGTCCACAACAGTTGTCG+AGG 0.600792 6_3:-93903231 None:intergenic
TTCAGTCTCCTTGGCTTCTG+CGG 0.601937 6_3:-93905338 None:intergenic
TCAAGGAGTTCTTTAAGACA+CGG 0.602455 6_3:+93902168 Msa0965960:five_prime_UTR
TGCTGTAAATTCAATTATCG+AGG 0.603012 6_3:+93903346 Msa0965960:five_prime_UTR
TGAAGCAGTTGCAATTGCAT+CGG 0.603597 6_3:+93904082 Msa0965960:five_prime_UTR
TCCCGAAACTATTGTGACGA+AGG 0.603689 6_3:+93906651 Msa0965960:CDS
AGGTTTGTTCGGTTCAACCT+CGG 0.604002 6_3:+93905217 Msa0965960:CDS
AAATCCTCATTCTTTACAGG+AGG 0.604341 6_3:-93902471 None:intergenic
AATGCCTCCTGTAAAGAATG+AGG 0.604427 6_3:+93902467 Msa0965960:five_prime_UTR
GTTGTAGGTCAGGAGTTGCA+GGG 0.609211 6_3:+93902828 Msa0965960:five_prime_UTR
ATCAGAAACTGACAATGGAA+AGG 0.610096 6_3:+93903502 Msa0965960:five_prime_UTR
ACATTGACCATGAAGAAGGA+AGG 0.610935 6_3:+93903029 Msa0965960:five_prime_UTR
GACGCTGAAAGCAACCAAGA+AGG 0.613970 6_3:+93903248 Msa0965960:five_prime_UTR
AAAGCCCTTGCTGAAACTGA+AGG 0.615327 6_3:+93906379 Msa0965960:CDS
ATAGATACAAACTGAACCTG+TGG 0.617602 6_3:-93906619 None:intergenic
AGGATTTCTACCATTAGCTG+AGG 0.618726 6_3:+93902908 Msa0965960:five_prime_UTR
AGAATTTGTAGCTGCAACCG+AGG 0.619096 6_3:+93903526 Msa0965960:five_prime_UTR
TAAGACACGGGTCATCAACT+CGG 0.619669 6_3:+93902181 Msa0965960:five_prime_UTR
ATCATCAACTACAGAAACTG+TGG 0.620439 6_3:+93903190 Msa0965960:five_prime_UTR
TACGAGAAGAAACCGGTGCA+GGG 0.620957 6_3:+93906341 Msa0965960:CDS
GATCACCTTCAGTTTCAGCA+AGG 0.621026 6_3:-93906384 None:intergenic
GATTTCGGAGCTTTCACGGA+CGG 0.623504 6_3:+93902555 Msa0965960:five_prime_UTR
AACCAAATGTTGATTAGGCG+CGG 0.623982 6_3:+93907034 Msa0965960:three_prime_UTR
CATTAGGGAGAAAATTGTCG+AGG 0.625066 6_3:+93906723 Msa0965960:CDS
TTCCCCGTAAAAGCTGCCCC+GGG 0.627643 6_3:-93902498 None:intergenic
AAACAATCAGAAACTGACAA+TGG 0.627847 6_3:+93903497 Msa0965960:five_prime_UTR
ACGGATAAGGAAAAGACTTG+AGG 0.629079 6_3:+93905090 Msa0965960:CDS
TCTTCCGGATTTCTTATCAG+CGG 0.630776 6_3:-93906449 None:intergenic
CGCTGAGAAGGAAACAGAGG+CGG 0.632734 6_3:+93903289 Msa0965960:five_prime_UTR
CCAGCTCCTCAAGAAACACC+AGG 0.634532 6_3:+93903611 Msa0965960:five_prime_UTR
AGGTGAATCTTGTACCTCCA+CGG 0.639783 6_3:-93902316 None:intergenic
CACAGAAACGGAAGTATCCG+TGG 0.640815 6_3:+93902299 Msa0965960:five_prime_UTR
TGTTCGGTTCAACCTCGGAG+AGG 0.640909 6_3:+93905222 Msa0965960:CDS
TGGACAAGAAGTTACGGTGA+AGG 0.643574 6_3:+93902641 Msa0965960:five_prime_UTR
TTTATTCAAGCTTTCCTCAG+GGG 0.650245 6_3:-93903845 None:intergenic
TGATGCTAGTTTGTCCCCTG+AGG 0.651987 6_3:+93903831 Msa0965960:five_prime_UTR
AGCTGTTGCAGAATTGGACA+AGG 0.653686 6_3:+93903052 Msa0965960:five_prime_UTR
TCGTAGTTGCTTAACCAAAG+CGG 0.653913 6_3:-93906323 None:intergenic
CGCCTCTGTTTCCTTCTCAG+CGG 0.656717 6_3:-93903288 None:intergenic
ATTAGGGAGAAAATTGTCGA+GGG 0.659307 6_3:+93906724 Msa0965960:CDS
GACAAGGCACTTGCACAAGT+GGG 0.662224 6_3:+93903068 Msa0965960:five_prime_UTR
GTGAAGAATATGACGAGGAG+TGG 0.674205 6_3:+93902855 Msa0965960:five_prime_UTR
AGTGGCAGGACTTTCAGGAG+AGG 0.675717 6_3:-93904015 None:intergenic
CGATGATATAGCCATGCAAG+TGG 0.678787 6_3:+93904932 Msa0965960:five_prime_UTR
TGTTACTGAAGATGTTCCCG+AGG 0.679114 6_3:+93904980 Msa0965960:five_prime_UTR
CCAAACGTTCAAGACCTGCA+AGG 0.680041 6_3:+93902436 Msa0965960:five_prime_UTR
CAGAGAAATCCGGCTCTGGG+AGG 0.680505 6_3:+93902754 Msa0965960:five_prime_UTR
AGTGGCTGATCAAATTGTTG+CGG 0.682112 6_3:+93903466 Msa0965960:five_prime_UTR
TGCCGCTGAGAAGGAAACAG+AGG 0.682448 6_3:+93903286 Msa0965960:five_prime_UTR
TCGAGGGAAGAATCTCAAAG+AGG 0.687349 6_3:+93906740 Msa0965960:CDS
TCTCTGATTCTGTAACAACA+GGG 0.691768 6_3:-93903574 None:intergenic
TTGGAGAGAATATTAAAGTG+CGG 0.701032 6_3:+93906851 Msa0965960:CDS
TTAGCTGAGGAAGATGACGA+TGG 0.704035 6_3:+93902921 Msa0965960:five_prime_UTR
ATCTGTATTGAGGATACACG+AGG 0.709993 6_3:+93907076 Msa0965960:three_prime_UTR
TAACAACATACTCTACTTGG+GGG 0.727944 6_3:-93904962 None:intergenic
GTACGGTGAAGAATATGACG+AGG 0.743517 6_3:+93902850 Msa0965960:five_prime_UTR
AGAAACGGAAGTATCCGTGG+AGG 0.788331 6_3:+93902302 Msa0965960:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTATTTAATTATGAAATTT+TGG + chr6_3:93905402-93905421 Msa0965960:intron 10.0%
!! GTATTTATATATGGAAATAT+TGG + chr6_3:93903655-93903674 Msa0965960:intron 15.0%
!!! TTTGATTTTAGCTATAATTT+CGG - chr6_3:93903695-93903714 None:intergenic 15.0%
!! TTATCTTATAAGCTTAAATT+AGG + chr6_3:93904523-93904542 Msa0965960:intron 15.0%
!! TAAAAACAAAAATGAAGTTT+GGG - chr6_3:93905547-93905566 None:intergenic 15.0%
!! TTAAAAACAAAAATGAAGTT+TGG - chr6_3:93905548-93905567 None:intergenic 15.0%
!!! ACTTCATTTTTGTTTTTAAA+AGG + chr6_3:93905549-93905568 Msa0965960:intron 15.0%
!! ATTACATATTCAATTAATCA+AGG + chr6_3:93905575-93905594 Msa0965960:intron 15.0%
!!! ATATATCATGTCAATTTTAA+TGG - chr6_3:93905643-93905662 None:intergenic 15.0%
!! AATTATGGAAATTTCATAAT+GGG - chr6_3:93905826-93905845 None:intergenic 15.0%
!! TAATTATGGAAATTTCATAA+TGG - chr6_3:93905827-93905846 None:intergenic 15.0%
!!! ATGAAACTTTCTTATTTTTC+AGG - chr6_3:93902035-93902054 None:intergenic 20.0%
!!! AAAAACACAAAATTTGTTGT+AGG + chr6_3:93902813-93902832 Msa0965960:five_prime_UTR 20.0%
!!! TAAGGATATTGCTAAATTTT+TGG + chr6_3:93903136-93903155 Msa0965960:five_prime_UTR 20.0%
!! ATCTCATTCGTATTTATATA+TGG + chr6_3:93903646-93903665 Msa0965960:intron 20.0%
!!! TAAGCAAAAAACTACATTTT+AGG + chr6_3:93904324-93904343 Msa0965960:intron 20.0%
!! TTATCTAAGAATTCAAAGAT+AGG - chr6_3:93904589-93904608 None:intergenic 20.0%
!! TTTAAAAACATCAACAATGT+TGG + chr6_3:93905521-93905540 Msa0965960:intron 20.0%
!!! TGGCTTTTAAATTAAGTTAA+AGG + chr6_3:93905782-93905801 Msa0965960:intron 20.0%
!! CATTAACTTTATGTACTAAT+TGG + chr6_3:93905874-93905893 Msa0965960:intron 20.0%
!! TATTAAATTGTTCAATGTTG+TGG + chr6_3:93906272-93906291 Msa0965960:intron 20.0%
!!! ATAATAACCAAATGTTGATT+AGG + chr6_3:93907029-93907048 Msa0965960:three_prime_UTR 20.0%
!! TTAATCATTGATCTATTTGA+AGG + chr6_3:93907243-93907262 Msa0965960:three_prime_UTR 20.0%
!! TATTCTTCATATGTTTCTGA+AGG + chr6_3:93901990-93902009 Msa0965960:five_prime_UTR 25.0%
! GTTATTCTTTCTTGTCAAAT+AGG - chr6_3:93902127-93902146 None:intergenic 25.0%
! CATTTATAATACTTCCTTCT+TGG - chr6_3:93903265-93903284 None:intergenic 25.0%
!!! CAAGAAGGAAGTATTATAAA+TGG + chr6_3:93903263-93903282 Msa0965960:five_prime_UTR 25.0%
! CAAAGTTAATAGGATACTAT+AGG - chr6_3:93903952-93903971 None:intergenic 25.0%
! ATTGAGGATTCAAAGTTAAT+AGG - chr6_3:93903962-93903981 None:intergenic 25.0%
! ATTAACTTTGAATCCTCAAT+CGG + chr6_3:93903962-93903981 Msa0965960:intron 25.0%
! ATGAAGCAAATAAGATGAAA+TGG - chr6_3:93904184-93904203 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - chr6_3:93904314-93904333 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG + chr6_3:93904349-93904368 Msa0965960:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr6_3:93904423-93904442 Msa0965960:intron 25.0%
! ACTTTATCATTCTTGATGTA+GGG - chr6_3:93905136-93905155 None:intergenic 25.0%
! GAGAAAATATGAAAGTTACA+AGG + chr6_3:93905197-93905216 Msa0965960:CDS 25.0%
!!! AAATTTTGGTAATTAGTACC+TGG + chr6_3:93905416-93905435 Msa0965960:intron 25.0%
!! AAGAAATAACTAGTTTGACA+TGG - chr6_3:93905472-93905491 None:intergenic 25.0%
!!! GTTGATGTTTTTAAACAAAG+AGG - chr6_3:93905516-93905535 None:intergenic 25.0%
! GACTAATTTGACACAAAAAA+CGG + chr6_3:93905751-93905770 Msa0965960:intron 25.0%
! TGTTTACTTTGGCATAATTA+TGG - chr6_3:93905841-93905860 None:intergenic 25.0%
! ACATCATTTGTAAAAAGAGT+AGG - chr6_3:93905949-93905968 None:intergenic 25.0%
!!! CCATTTTTTTCTCAAAGTTT+GGG - chr6_3:93906236-93906255 None:intergenic 25.0%
!!! TCCATTTTTTTCTCAAAGTT+TGG - chr6_3:93906237-93906256 None:intergenic 25.0%
!!! AGTATTTGTTGCATTTTCAT+AGG + chr6_3:93906954-93906973 Msa0965960:three_prime_UTR 25.0%
!!! TTTTCATAGGAAAAAGTATG+CGG + chr6_3:93906967-93906986 Msa0965960:three_prime_UTR 25.0%
!!! TCAATTTTGAAACAGAAATC+TGG + chr6_3:93907000-93907019 Msa0965960:three_prime_UTR 25.0%
! TTCAATTGCAAGTTTCATTA+AGG + chr6_3:93907157-93907176 Msa0965960:three_prime_UTR 25.0%
TGATATTATGGGATTCATGT+TGG - chr6_3:93902067-93902086 None:intergenic 30.0%
GTAAAATCTATCCAACCATT+TGG + chr6_3:93902522-93902541 Msa0965960:five_prime_UTR 30.0%
! GTGTTTTTCTTATCTTTCCT+TGG - chr6_3:93902801-93902820 None:intergenic 30.0%
! ACTTTTATATCACTTCCTGA+AGG + chr6_3:93902879-93902898 Msa0965960:five_prime_UTR 30.0%
!! GATAATGGGAAAATCTTCTT+TGG + chr6_3:93902953-93902972 Msa0965960:five_prime_UTR 30.0%
TACGAAAAGCCAATACAAAA+GGG - chr6_3:93903112-93903131 None:intergenic 30.0%
!!! ATTGGCTTTTCGTAGAAATA+AGG + chr6_3:93903118-93903137 Msa0965960:five_prime_UTR 30.0%
!! TTGCTAAATTTTTGGATCAG+AGG + chr6_3:93903144-93903163 Msa0965960:five_prime_UTR 30.0%
!! TGCTAAATTTTTGGATCAGA+GGG + chr6_3:93903145-93903164 Msa0965960:five_prime_UTR 30.0%
TGCTGTAAATTCAATTATCG+AGG + chr6_3:93903346-93903365 Msa0965960:five_prime_UTR 30.0%
! TTTAATAGAAACTGACTCAC+CGG + chr6_3:93903439-93903458 Msa0965960:five_prime_UTR 30.0%
AAACAATCAGAAACTGACAA+TGG + chr6_3:93903497-93903516 Msa0965960:five_prime_UTR 30.0%
! GTCATCTATTTGAAATGCAA+AGG - chr6_3:93903779-93903798 None:intergenic 30.0%
GATACTATAGGAAAAGAAAG+GGG - chr6_3:93903940-93903959 None:intergenic 30.0%
GGATACTATAGGAAAAGAAA+GGG - chr6_3:93903941-93903960 None:intergenic 30.0%
AGGATACTATAGGAAAAGAA+AGG - chr6_3:93903942-93903961 None:intergenic 30.0%
TTGTCCATTAGAGTTAGATA+AGG - chr6_3:93904120-93904139 None:intergenic 30.0%
AAAAAAGAATATACACCCTC+CGG + chr6_3:93904292-93904311 Msa0965960:intron 30.0%
! TTAGGTTGTTTATCCAAACA+AGG + chr6_3:93904541-93904560 Msa0965960:intron 30.0%
TAGAAAACTATGACCTTGTT+TGG - chr6_3:93904557-93904576 None:intergenic 30.0%
AGTAACAACATACTCTACTT+GGG - chr6_3:93904967-93904986 None:intergenic 30.0%
ATTAGATCAAGGATTGTTGA+AGG + chr6_3:93905067-93905086 Msa0965960:CDS 30.0%
CACTTTATCATTCTTGATGT+AGG - chr6_3:93905137-93905156 None:intergenic 30.0%
GAATGATAAAGTGACAGTAA+AGG + chr6_3:93905144-93905163 Msa0965960:CDS 30.0%
TAAAGTGACAGTAAAGGATA+TGG + chr6_3:93905150-93905169 Msa0965960:CDS 30.0%
! TGAAAGTTACAAGGTTTGTT+CGG + chr6_3:93905206-93905225 Msa0965960:CDS 30.0%
GACATGGAAAAAAAAAGTCA+AGG - chr6_3:93905456-93905475 None:intergenic 30.0%
TTGACACAAAAAACGGATAA+AGG + chr6_3:93905758-93905777 Msa0965960:intron 30.0%
AAATTAAGTTAAAGGAACCC+TGG + chr6_3:93905790-93905809 Msa0965960:intron 30.0%
! TATGCCAAAGTAAACACTTT+TGG + chr6_3:93905845-93905864 Msa0965960:intron 30.0%
!! ATCACCAAAAGTGTTTACTT+TGG - chr6_3:93905852-93905871 None:intergenic 30.0%
TGCTAAAATATTCCAGCAAT+GGG + chr6_3:93905907-93905926 Msa0965960:intron 30.0%
TGAAATCTACAAACTGTACA+AGG + chr6_3:93905987-93906006 Msa0965960:intron 30.0%
GAAATCTACAAACTGTACAA+GGG + chr6_3:93905988-93906007 Msa0965960:intron 30.0%
AGGTTAGGGTTAAAATATTC+AGG - chr6_3:93906025-93906044 None:intergenic 30.0%
! GCATTTTGTAAACTTACTAC+TGG - chr6_3:93906177-93906196 None:intergenic 30.0%
! CCCAAACTTTGAGAAAAAAA+TGG + chr6_3:93906233-93906252 Msa0965960:intron 30.0%
! AATTTTCTCCCTAATGTTCT+CGG - chr6_3:93906719-93906738 None:intergenic 30.0%
ACACTGTCATCCTTAATAAA+AGG - chr6_3:93906793-93906812 None:intergenic 30.0%
! TTATAGTGAAAGACTTGGTT+AGG + chr6_3:93906812-93906831 Msa0965960:CDS 30.0%
TTGGAGAGAATATTAAAGTG+CGG + chr6_3:93906851-93906870 Msa0965960:CDS 30.0%
TCATTGATCTATTTGAAGGT+AGG + chr6_3:93907247-93907266 Msa0965960:three_prime_UTR 30.0%
! TATGTTTCTGAAGGTGATAC+AGG + chr6_3:93901999-93902018 Msa0965960:five_prime_UTR 35.0%
! TAACCAGACTCAACTTTTCA+AGG + chr6_3:93902151-93902170 Msa0965960:five_prime_UTR 35.0%
!! TCAAGGAGTTCTTTAAGACA+CGG + chr6_3:93902168-93902187 Msa0965960:five_prime_UTR 35.0%
! TGGAAGTTCGAGAATTTTTC+CGG - chr6_3:93902272-93902291 None:intergenic 35.0%
AGATTCACCAGAAACTTCAT+TGG - chr6_3:93902346-93902365 None:intergenic 35.0%
GAATCTCCTTCAAATGAAGT+TGG + chr6_3:93902360-93902379 Msa0965960:five_prime_UTR 35.0%
CTTGTTCCAACTTCATTTGA+AGG - chr6_3:93902369-93902388 None:intergenic 35.0%
AAATCCTCATTCTTTACAGG+AGG - chr6_3:93902474-93902493 None:intergenic 35.0%
TCCTGTAAAGAATGAGGATT+TGG + chr6_3:93902473-93902492 Msa0965960:five_prime_UTR 35.0%
ACCAAATCCTCATTCTTTAC+AGG - chr6_3:93902477-93902496 None:intergenic 35.0%
AAATCAACAAACGCACCAAA+TGG - chr6_3:93902540-93902559 None:intergenic 35.0%
!! TTTGGTGCGTTTGTTGATTT+CGG + chr6_3:93902540-93902559 Msa0965960:five_prime_UTR 35.0%
!! GTTGAGTGATAGCTTTGTAA+AGG + chr6_3:93902596-93902615 Msa0965960:five_prime_UTR 35.0%
!! CACAAAATTTGTTGTAGGTC+AGG + chr6_3:93902818-93902837 Msa0965960:five_prime_UTR 35.0%
! GATGGATTTGGGAAGATAAT+GGG + chr6_3:93902939-93902958 Msa0965960:five_prime_UTR 35.0%
! GGAAAATCTTCTTTGGAGAT+TGG + chr6_3:93902960-93902979 Msa0965960:five_prime_UTR 35.0%
CTACGAAAAGCCAATACAAA+AGG - chr6_3:93903113-93903132 None:intergenic 35.0%
ATCATCAACTACAGAAACTG+TGG + chr6_3:93903190-93903209 Msa0965960:five_prime_UTR 35.0%
ATCAGAAACTGACAATGGAA+AGG + chr6_3:93903502-93903521 Msa0965960:five_prime_UTR 35.0%
AACTGCATCATTATCTTCCT+CGG - chr6_3:93903546-93903565 None:intergenic 35.0%
TCTCTGATTCTGTAACAACA+GGG - chr6_3:93903577-93903596 None:intergenic 35.0%
ATCTCTGATTCTGTAACAAC+AGG - chr6_3:93903578-93903597 None:intergenic 35.0%
TGAGATAGAAAACAAGAACC+TGG - chr6_3:93903632-93903651 None:intergenic 35.0%
TTTATTCAAGCTTTCCTCAG+GGG - chr6_3:93903848-93903867 None:intergenic 35.0%
CTTTATTCAAGCTTTCCTCA+GGG - chr6_3:93903849-93903868 None:intergenic 35.0%
AGCACCTTATCTAACTCTAA+TGG + chr6_3:93904113-93904132 Msa0965960:five_prime_UTR 35.0%
! TCTAACTCTAATGGACAAAC+TGG + chr6_3:93904122-93904141 Msa0965960:five_prime_UTR 35.0%
GAATTCAAAGATAGGTGAAC+AGG - chr6_3:93904581-93904600 None:intergenic 35.0%
TATAGTTGCTGCAATCCAAA+GGG - chr6_3:93904643-93904662 None:intergenic 35.0%
ATATAGTTGCTGCAATCCAA+AGG - chr6_3:93904644-93904663 None:intergenic 35.0%
! AATGCTCTTTCTGAAAGTGA+AGG + chr6_3:93904723-93904742 Msa0965960:five_prime_UTR 35.0%
CAAGAGCTCCTTAGAAAAAA+AGG + chr6_3:93904762-93904781 Msa0965960:five_prime_UTR 35.0%
!!! TCGCTAAGCCTTTTTTTCTA+AGG - chr6_3:93904773-93904792 None:intergenic 35.0%
TAACAACATACTCTACTTGG+GGG - chr6_3:93904965-93904984 None:intergenic 35.0%
GTAACAACATACTCTACTTG+GGG - chr6_3:93904966-93904985 None:intergenic 35.0%
CAGTAACAACATACTCTACT+TGG - chr6_3:93904968-93904987 None:intergenic 35.0%
TTCTTTCTTCACGAATTCCT+CGG - chr6_3:93905000-93905019 None:intergenic 35.0%
!! ATCCTTGATCTAATTTGCTC+CGG - chr6_3:93905061-93905080 None:intergenic 35.0%
AAGCAGACAATTGCAACTAT+TGG + chr6_3:93905175-93905194 Msa0965960:CDS 35.0%
TCATTGAACCACACTTACTT+TGG - chr6_3:93905364-93905383 None:intergenic 35.0%
GAGGACTAACTAACTTAACA+CGG - chr6_3:93905497-93905516 None:intergenic 35.0%
CACAAAAAACGGATAAAGGA+TGG + chr6_3:93905762-93905781 Msa0965960:intron 35.0%
GTGCTAAAATATTCCAGCAA+TGG + chr6_3:93905906-93905925 Msa0965960:intron 35.0%
AGAATAACTCGAGAAGGTTA+GGG - chr6_3:93906039-93906058 None:intergenic 35.0%
AAGAATAACTCGAGAAGGTT+AGG - chr6_3:93906040-93906059 None:intergenic 35.0%
ATAGCAAGAATAACTCGAGA+AGG - chr6_3:93906045-93906064 None:intergenic 35.0%
AAATCATACAGTCACAGCTT+AGG - chr6_3:93906081-93906100 None:intergenic 35.0%
!! TGAAAGCACTGACACAAATA+CGG + chr6_3:93906116-93906135 Msa0965960:intron 35.0%
TGTAAACTTACTACTGGTGT+CGG - chr6_3:93906171-93906190 None:intergenic 35.0%
AACTGAAGGTGATCTTGAAA+AGG + chr6_3:93906393-93906412 Msa0965960:CDS 35.0%
AAGTGAGAAATTCAAGGAGT+TGG + chr6_3:93906564-93906583 Msa0965960:CDS 35.0%
ATAGATACAAACTGAACCTG+TGG - chr6_3:93906622-93906641 None:intergenic 35.0%
TTCCTTCGTCACAATAGTTT+CGG - chr6_3:93906656-93906675 None:intergenic 35.0%
! ATTTTCTCCCTAATGTTCTC+GGG - chr6_3:93906718-93906737 None:intergenic 35.0%
ATTAGGGAGAAAATTGTCGA+GGG + chr6_3:93906724-93906743 Msa0965960:CDS 35.0%
!! TCTAGAGCAGCCTTTTATTA+AGG + chr6_3:93906780-93906799 Msa0965960:CDS 35.0%
CAGTGTTATAGTGAAAGACT+TGG + chr6_3:93906807-93906826 Msa0965960:CDS 35.0%
ACTGATCTGTATCTGTATTG+AGG + chr6_3:93907066-93907085 Msa0965960:three_prime_UTR 35.0%
ACTCTTTGCTTATAGTATGC+TGG + chr6_3:93907271-93907290 Msa0965960:three_prime_UTR 35.0%
CCGACAGAGCATGATATTAT+GGG - chr6_3:93902078-93902097 None:intergenic 40.0%
CCCATAATATCATGCTCTGT+CGG + chr6_3:93902075-93902094 Msa0965960:five_prime_UTR 40.0%
TCCGACAGAGCATGATATTA+TGG - chr6_3:93902079-93902098 None:intergenic 40.0%
ATGCTCTGTCGGAAATTCTT+CGG + chr6_3:93902086-93902105 Msa0965960:five_prime_UTR 40.0%
GGAAATTCTTCGGTTATTCC+TGG + chr6_3:93902096-93902115 Msa0965960:five_prime_UTR 40.0%
ACTCCTTGAAAAGTTGAGTC+TGG - chr6_3:93902157-93902176 None:intergenic 40.0%
!! CAAGGAGTTCTTTAAGACAC+GGG + chr6_3:93902169-93902188 Msa0965960:five_prime_UTR 40.0%
TTTCCTTCATTTGTCGCCAA+TGG + chr6_3:93902213-93902232 Msa0965960:five_prime_UTR 40.0%
!! GTTCTGAGGAAAAACTCCAT+TGG - chr6_3:93902232-93902251 None:intergenic 40.0%
ACAAGCGAATATGCTCTTAC+CGG + chr6_3:93902250-93902269 Msa0965960:five_prime_UTR 40.0%
TTCCATATCAGCCACAGAAA+CGG + chr6_3:93902287-93902306 Msa0965960:five_prime_UTR 40.0%
AATGCCTCCTGTAAAGAATG+AGG + chr6_3:93902467-93902486 Msa0965960:five_prime_UTR 40.0%
! AAGAATGAGGATTTGGTTCC+CGG + chr6_3:93902480-93902499 Msa0965960:five_prime_UTR 40.0%
!! TGTTGATTTCGGAGCTTTCA+CGG + chr6_3:93902551-93902570 Msa0965960:five_prime_UTR 40.0%
GTCTCTTGGACAAGAAGTTA+CGG + chr6_3:93902635-93902654 Msa0965960:five_prime_UTR 40.0%
ATGCGTGAAAACACTGATAC+TGG + chr6_3:93902705-93902724 Msa0965960:five_prime_UTR 40.0%
TCGAACAATGCAGAGAAATC+CGG + chr6_3:93902744-93902763 Msa0965960:five_prime_UTR 40.0%
TATATCACTTCCTGAAGGAG+AGG + chr6_3:93902884-93902903 Msa0965960:five_prime_UTR 40.0%
AGGATTTCTACCATTAGCTG+AGG + chr6_3:93902908-93902927 Msa0965960:five_prime_UTR 40.0%
! AGGAAGATGACGATGGATTT+GGG + chr6_3:93902928-93902947 Msa0965960:five_prime_UTR 40.0%
! CGATGGATTTGGGAAGATAA+TGG + chr6_3:93902938-93902957 Msa0965960:five_prime_UTR 40.0%
ACATTGACCATGAAGAAGGA+AGG + chr6_3:93903029-93903048 Msa0965960:five_prime_UTR 40.0%
! CGCAACAAACCCTTTTGTAT+TGG + chr6_3:93903100-93903119 Msa0965960:five_prime_UTR 40.0%
AGAAACTGTGGAAGATTCAC+TGG + chr6_3:93903202-93903221 Msa0965960:five_prime_UTR 40.0%
ATTTGATCAGCCACTTCAAC+CGG - chr6_3:93903461-93903480 None:intergenic 40.0%
AGTGGCTGATCAAATTGTTG+CGG + chr6_3:93903466-93903485 Msa0965960:five_prime_UTR 40.0%
CCTTTATTCAAGCTTTCCTC+AGG - chr6_3:93903850-93903869 None:intergenic 40.0%
CCTGAGGAAAGCTTGAATAA+AGG + chr6_3:93903847-93903866 Msa0965960:five_prime_UTR 40.0%
! TCAATTACATCTGCCGATTG+AGG - chr6_3:93903978-93903997 None:intergenic 40.0%
! TCTTCAACTTGTGCTGATAC+AGG - chr6_3:93904062-93904081 None:intergenic 40.0%
TGAAGCAGTTGCAATTGCAT+CGG + chr6_3:93904082-93904101 Msa0965960:five_prime_UTR 40.0%
TCAGATGAAGGATCGAGTAA+AGG + chr6_3:93904155-93904174 Msa0965960:five_prime_UTR 40.0%
TGCTTATATTAGTGACCGGA+GGG - chr6_3:93904310-93904329 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - chr6_3:93904311-93904330 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr6_3:93904426-93904445 Msa0965960:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr6_3:93904427-93904446 Msa0965960:intron 40.0%
! ATAAATGGAAGTACACCCTC+CGG - chr6_3:93904445-93904464 None:intergenic 40.0%
GTAAGAACCTATCCTTCCTT+CGG - chr6_3:93904826-93904845 None:intergenic 40.0%
TCTTTCTTCACGAATTCCTC+GGG - chr6_3:93904999-93905018 None:intergenic 40.0%
AGAAGATCTTGCGTCAAAAC+CGG + chr6_3:93905039-93905058 Msa0965960:CDS 40.0%
AACCGGAGCAAATTAGATCA+AGG + chr6_3:93905056-93905075 Msa0965960:CDS 40.0%
GATCAAGGATTGTTGAAGGA+CGG + chr6_3:93905071-93905090 Msa0965960:CDS 40.0%
ACGGATAAGGAAAAGACTTG+AGG + chr6_3:93905090-93905109 Msa0965960:CDS 40.0%
TGCACAAACTACAGCAAAAC+CGG + chr6_3:93905285-93905304 Msa0965960:CDS 40.0%
TCTTTCACTGGAGTAGTTAC+CGG - chr6_3:93905307-93905326 None:intergenic 40.0%
! TTACTTTGGTTCAGTCTCCT+TGG - chr6_3:93905350-93905369 None:intergenic 40.0%
AGACTGAACCAAAGTAAGTG+TGG + chr6_3:93905353-93905372 Msa0965960:intron 40.0%
TAGTACCTGGAGTTTCAAAC+AGG + chr6_3:93905429-93905448 Msa0965960:intron 40.0%
TAATGGGAAAAACGACACCA+GGG - chr6_3:93905810-93905829 None:intergenic 40.0%
! ATAATGGGAAAAACGACACC+AGG - chr6_3:93905811-93905830 None:intergenic 40.0%
ATTGTTCAATGTTGTGGTGC+AGG + chr6_3:93906278-93906297 Msa0965960:intron 40.0%
TCGTAGTTGCTTAACCAAAG+CGG - chr6_3:93906326-93906345 None:intergenic 40.0%
AAGCAACTACGAGAAGAAAC+CGG + chr6_3:93906334-93906353 Msa0965960:CDS 40.0%
ATCACCTTCAGTTTCAGCAA+GGG - chr6_3:93906386-93906405 None:intergenic 40.0%
CAAGCATACCTCAGGAAAAA+GGG + chr6_3:93906418-93906437 Msa0965960:CDS 40.0%
ATTTCTTATCAGCGGATGAG+AGG - chr6_3:93906444-93906463 None:intergenic 40.0%
TCATCCGCTGATAAGAAATC+CGG + chr6_3:93906445-93906464 Msa0965960:CDS 40.0%
TCTTCCGGATTTCTTATCAG+CGG - chr6_3:93906452-93906471 None:intergenic 40.0%
TGATAAGAAATCCGGAAGAC+TGG + chr6_3:93906453-93906472 Msa0965960:CDS 40.0%
! AACTGTGAAACCGACTTTGT+TGG + chr6_3:93906538-93906557 Msa0965960:CDS 40.0%
TGGCAGAAGTGAGAAATTCA+AGG + chr6_3:93906558-93906577 Msa0965960:CDS 40.0%
TCCTTCGTCACAATAGTTTC+GGG - chr6_3:93906655-93906674 None:intergenic 40.0%
TTCGAAACCCGAGAACATTA+GGG + chr6_3:93906708-93906727 Msa0965960:CDS 40.0%
CATTAGGGAGAAAATTGTCG+AGG + chr6_3:93906723-93906742 Msa0965960:CDS 40.0%
GGAAGAATCTCAAAGAGGTT+AGG + chr6_3:93906745-93906764 Msa0965960:CDS 40.0%
AGGCAAAGTATAGCTGCTAT+TGG + chr6_3:93906832-93906851 Msa0965960:CDS 40.0%
!! TTAAAGTGCGGCGTTTTGTT+CGG + chr6_3:93906863-93906882 Msa0965960:CDS 40.0%
GAAAACCTTGTAAGCTATGC+TGG - chr6_3:93906928-93906947 None:intergenic 40.0%
! AACCAAATGTTGATTAGGCG+CGG + chr6_3:93907034-93907053 Msa0965960:three_prime_UTR 40.0%
ATCTGTATTGAGGATACACG+AGG + chr6_3:93907076-93907095 Msa0965960:three_prime_UTR 40.0%
CTTGTCAAATAGGCAACTCC+AGG - chr6_3:93902117-93902136 None:intergenic 45.0%
TAAGACACGGGTCATCAACT+CGG + chr6_3:93902181-93902200 Msa0965960:five_prime_UTR 45.0%
ACTCCATTGGCGACAAATGA+AGG - chr6_3:93902219-93902238 None:intergenic 45.0%
GAGCATATTCGCTTGTTCTG+AGG - chr6_3:93902246-93902265 None:intergenic 45.0%
TTCCGTTTCTGTGGCTGATA+TGG - chr6_3:93902292-93902311 None:intergenic 45.0%
AGGTGAATCTTGTACCTCCA+CGG - chr6_3:93902319-93902338 None:intergenic 45.0%
CCAGAAACTTCATTGGCAAC+AGG - chr6_3:93902339-93902358 None:intergenic 45.0%
CCTGTTGCCAATGAAGTTTC+TGG + chr6_3:93902336-93902355 Msa0965960:five_prime_UTR 45.0%
! AGAATGAGGATTTGGTTCCC+GGG + chr6_3:93902481-93902500 Msa0965960:five_prime_UTR 45.0%
CAACAAACGCACCAAATGGT+TGG - chr6_3:93902536-93902555 None:intergenic 45.0%
! GTCTCAAGTGTTGTGTCTCT+TGG + chr6_3:93902621-93902640 Msa0965960:five_prime_UTR 45.0%
TGGACAAGAAGTTACGGTGA+AGG + chr6_3:93902641-93902660 Msa0965960:five_prime_UTR 45.0%
TCTTTCCTTGGACCCGATTT+CGG - chr6_3:93902789-93902808 None:intergenic 45.0%
GTACGGTGAAGAATATGACG+AGG + chr6_3:93902850-93902869 Msa0965960:five_prime_UTR 45.0%
GTGAAGAATATGACGAGGAG+TGG + chr6_3:93902855-93902874 Msa0965960:five_prime_UTR 45.0%
AGAAATCCTTCCTCTCCTTC+AGG - chr6_3:93902897-93902916 None:intergenic 45.0%
TCGTCATCTTCCTCAGCTAA+TGG - chr6_3:93902921-93902940 None:intergenic 45.0%
TTAGCTGAGGAAGATGACGA+TGG + chr6_3:93902921-93902940 Msa0965960:five_prime_UTR 45.0%
! GAGGAAGATGACGATGGATT+TGG + chr6_3:93902927-93902946 Msa0965960:five_prime_UTR 45.0%
! CGAGTTTTGCGTATCACAAG+AGG + chr6_3:93902999-93903018 Msa0965960:five_prime_UTR 45.0%
AGCGACATTGACCATGAAGA+AGG + chr6_3:93903025-93903044 Msa0965960:five_prime_UTR 45.0%
AACAGCTCCTTCCTTCTTCA+TGG - chr6_3:93903039-93903058 None:intergenic 45.0%
AGCTGTTGCAGAATTGGACA+AGG + chr6_3:93903052-93903071 Msa0965960:five_prime_UTR 45.0%
!! TATAAATGGTGCCGCTGAGA+AGG + chr6_3:93903277-93903296 Msa0965960:five_prime_UTR 45.0%
! CAACGTTGAAACTGACTCAC+CGG + chr6_3:93903397-93903416 Msa0965960:five_prime_UTR 45.0%
AGAATTTGTAGCTGCAACCG+AGG + chr6_3:93903526-93903545 Msa0965960:five_prime_UTR 45.0%
GATAATGATGCAGTTGAGCC+TGG + chr6_3:93903551-93903570 Msa0965960:five_prime_UTR 45.0%
CAAGAACCTGGTGTTTCTTG+AGG - chr6_3:93903620-93903639 None:intergenic 45.0%
! TTCAGGAGAGGGAAGTTGAT+TGG - chr6_3:93904006-93904025 None:intergenic 45.0%
TTGTTCTTGCACCTCTTCAG+TGG - chr6_3:93904036-93904055 None:intergenic 45.0%
GGCATTACTGCTTCAGATGA+AGG + chr6_3:93904143-93904162 Msa0965960:five_prime_UTR 45.0%
CAGCACTTGTGAAGCAACTT+CGG + chr6_3:93904667-93904686 Msa0965960:five_prime_UTR 45.0%
AGCACTTGTGAAGCAACTTC+GGG + chr6_3:93904668-93904687 Msa0965960:five_prime_UTR 45.0%
TCTAAGGAGCTCTTGTGCTT+TGG - chr6_3:93904757-93904776 None:intergenic 45.0%
GTTCTTACATCCATGACAGC+AGG + chr6_3:93904838-93904857 Msa0965960:five_prime_UTR 45.0%
TACATCCATGACAGCAGGAT+CGG + chr6_3:93904843-93904862 Msa0965960:five_prime_UTR 45.0%
! GAGACAGATTTTGTCTCTCG+AGG + chr6_3:93904888-93904907 Msa0965960:five_prime_UTR 45.0%
CGATGATATAGCCATGCAAG+TGG + chr6_3:93904932-93904951 Msa0965960:five_prime_UTR 45.0%
TGTTACTGAAGATGTTCCCG+AGG + chr6_3:93904980-93904999 Msa0965960:five_prime_UTR 45.0%
GGATTGTTGAAGGACGGATA+AGG + chr6_3:93905077-93905096 Msa0965960:CDS 45.0%
! AGGTTTGTTCGGTTCAACCT+CGG + chr6_3:93905217-93905236 Msa0965960:CDS 45.0%
GGGTTTGGAAAAGAAAAGCG+AGG + chr6_3:93905243-93905262 Msa0965960:CDS 45.0%
GGTAACTACTCCAGTGAAAG+AGG + chr6_3:93905306-93905325 Msa0965960:CDS 45.0%
! AAGGACCTGTTTGAAACTCC+AGG - chr6_3:93905437-93905456 None:intergenic 45.0%
! CTGACCTTGTTGTCAACGAA+AGG + chr6_3:93905683-93905702 Msa0965960:intron 45.0%
! TTGGCCTTTCGTTGACAACA+AGG - chr6_3:93905690-93905709 None:intergenic 45.0%
TGTCAACGAAAGGCCAATTG+TGG + chr6_3:93905693-93905712 Msa0965960:intron 45.0%
!! AGGCCAATTGTGGTACTGAT+CGG + chr6_3:93905703-93905722 Msa0965960:intron 45.0%
TCACCGATCAGTACCACAAT+TGG - chr6_3:93905709-93905728 None:intergenic 45.0%
TGAGAAATGCAACCCATTGC+TGG - chr6_3:93905922-93905941 None:intergenic 45.0%
AAAGCCCTTGCTGAAACTGA+AGG + chr6_3:93906379-93906398 Msa0965960:CDS 45.0%
GATCACCTTCAGTTTCAGCA+AGG - chr6_3:93906387-93906406 None:intergenic 45.0%
GCAAGCATACCTCAGGAAAA+AGG + chr6_3:93906417-93906436 Msa0965960:CDS 45.0%
TACATTCACGATGCACGCAT+TGG + chr6_3:93906499-93906518 Msa0965960:CDS 45.0%
CTCACTTCTGCCAACAAAGT+CGG - chr6_3:93906551-93906570 None:intergenic 45.0%
TCCCGAAACTATTGTGACGA+AGG + chr6_3:93906651-93906670 Msa0965960:CDS 45.0%
CTTCGAAACCCGAGAACATT+AGG + chr6_3:93906707-93906726 Msa0965960:CDS 45.0%
TCGAGGGAAGAATCTCAAAG+AGG + chr6_3:93906740-93906759 Msa0965960:CDS 45.0%
!! CGTTTTGTTCGGTTCACTCT+TGG + chr6_3:93906874-93906893 Msa0965960:CDS 45.0%
CTGTACCAGCATAGCTTACA+AGG + chr6_3:93906920-93906939 Msa0965960:exon 45.0%
!! AAGATAAAATATATTATAAA+TGG - chr6_3:93904460-93904479 None:intergenic 5.0%
CACGGATACTTCCGTTTCTG+TGG - chr6_3:93902301-93902320 None:intergenic 50.0%
!! CACAGAAACGGAAGTATCCG+TGG + chr6_3:93902299-93902318 Msa0965960:five_prime_UTR 50.0%
!! AGAAACGGAAGTATCCGTGG+AGG + chr6_3:93902302-93902321 Msa0965960:five_prime_UTR 50.0%
!! CCAGTGTTGGCATCAGACTT+AGG - chr6_3:93902405-93902424 None:intergenic 50.0%
CCTAAGTCTGATGCCAACAC+TGG + chr6_3:93902402-93902421 Msa0965960:five_prime_UTR 50.0%
GGCTTTCGTAGAACCAGTGT+TGG - chr6_3:93902418-93902437 None:intergenic 50.0%
CCTTGCAGGTCTTGAACGTT+TGG - chr6_3:93902439-93902458 None:intergenic 50.0%
CCAAACGTTCAAGACCTGCA+AGG + chr6_3:93902436-93902455 Msa0965960:five_prime_UTR 50.0%
!! GGCATTTCGCTTTTCCTTGC+AGG - chr6_3:93902453-93902472 None:intergenic 50.0%
! GAATGAGGATTTGGTTCCCG+GGG + chr6_3:93902482-93902501 Msa0965960:five_prime_UTR 50.0%
GATTTCGGAGCTTTCACGGA+CGG + chr6_3:93902555-93902574 Msa0965960:five_prime_UTR 50.0%
AATGCAGAGAAATCCGGCTC+TGG + chr6_3:93902750-93902769 Msa0965960:five_prime_UTR 50.0%
ATGCAGAGAAATCCGGCTCT+GGG + chr6_3:93902751-93902770 Msa0965960:five_prime_UTR 50.0%
GAGGTGGGATTCTCCGAAAT+CGG + chr6_3:93902773-93902792 Msa0965960:five_prime_UTR 50.0%
AGGTGGGATTCTCCGAAATC+GGG + chr6_3:93902774-93902793 Msa0965960:five_prime_UTR 50.0%
ATTCTCCGAAATCGGGTCCA+AGG + chr6_3:93902781-93902800 Msa0965960:five_prime_UTR 50.0%
TGTTGTAGGTCAGGAGTTGC+AGG + chr6_3:93902827-93902846 Msa0965960:five_prime_UTR 50.0%
GTTGTAGGTCAGGAGTTGCA+GGG + chr6_3:93902828-93902847 Msa0965960:five_prime_UTR 50.0%
TCACTTCCTGAAGGAGAGGA+AGG + chr6_3:93902888-93902907 Msa0965960:five_prime_UTR 50.0%
GGAAGGAGCTGTTGCAGAAT+TGG + chr6_3:93903046-93903065 Msa0965960:five_prime_UTR 50.0%
! GACAAGGCACTTGCACAAGT+GGG + chr6_3:93903068-93903087 Msa0965960:five_prime_UTR 50.0%
CGATTCCTCGACAACTGTTG+TGG + chr6_3:93903226-93903245 Msa0965960:five_prime_UTR 50.0%
GACGCTGAAAGCAACCAAGA+AGG + chr6_3:93903248-93903267 Msa0965960:five_prime_UTR 50.0%
AGAGGCGGTTGCTGAAAGTT+TGG + chr6_3:93903304-93903323 Msa0965960:five_prime_UTR 50.0%
CTTTCATCAGCCACGTCAAC+CGG - chr6_3:93903419-93903438 None:intergenic 50.0%
! AACTGACTCACCGGTTGAAG+TGG + chr6_3:93903448-93903467 Msa0965960:five_prime_UTR 50.0%
GATTCTGTAACAACAGGGCC+AGG - chr6_3:93903572-93903591 None:intergenic 50.0%
! TGATGCTAGTTTGTCCCCTG+AGG + chr6_3:93903831-93903850 Msa0965960:five_prime_UTR 50.0%
TCTTCAGTGGCAGGACTTTC+AGG - chr6_3:93904023-93904042 None:intergenic 50.0%
TGAAAGTCCTGCCACTGAAG+AGG + chr6_3:93904022-93904041 Msa0965960:five_prime_UTR 50.0%
CGAAGTTGCTTCACAAGTGC+TGG - chr6_3:93904669-93904688 None:intergenic 50.0%
AAGCAACTTCGGGACGAAAC+AGG + chr6_3:93904678-93904697 Msa0965960:five_prime_UTR 50.0%
CGAAACAGGAGCTGGAATGA+TGG + chr6_3:93904692-93904711 Msa0965960:five_prime_UTR 50.0%
AAACACCGATCCTGCTGTCA+TGG - chr6_3:93904851-93904870 None:intergenic 50.0%
!! TGACAGCAGGATCGGTGTTT+TGG + chr6_3:93904851-93904870 Msa0965960:five_prime_UTR 50.0%
! TCTTTTCCAAACCCTCTCCG+AGG - chr6_3:93905237-93905256 None:intergenic 50.0%
TTCAGTCTCCTTGGCTTCTG+CGG - chr6_3:93905341-93905360 None:intergenic 50.0%
GTGCAGGAAATCAGCAGTAG+TGG + chr6_3:93906294-93906313 Msa0965960:intron 50.0%
TACGAGAAGAAACCGGTGCA+GGG + chr6_3:93906341-93906360 Msa0965960:CDS 50.0%
! AAAAGGCGCAAGCATACCTC+AGG + chr6_3:93906410-93906429 Msa0965960:CDS 50.0%
! ATGAGAGGCCCTTTTTCCTG+AGG - chr6_3:93906429-93906448 None:intergenic 50.0%
CTGGCAGCTGAAGGAAGAAT+CGG + chr6_3:93906472-93906491 Msa0965960:CDS 50.0%
TGTTCTCGGGTTTCGAAGCA+AGG - chr6_3:93906705-93906724 None:intergenic 50.0%
GTCCGCGCCTAATCAACATT+TGG - chr6_3:93907039-93907058 None:intergenic 50.0%
TTTCCCCGTAAAAGCTGCCC+CGG - chr6_3:93902502-93902521 None:intergenic 55.0%
AGGTCAGGAGTTGCAGGGTA+CGG + chr6_3:93902833-93902852 Msa0965960:five_prime_UTR 55.0%
! GGACAAGGCACTTGCACAAG+TGG + chr6_3:93903067-93903086 Msa0965960:five_prime_UTR 55.0%
AGCGTCCACAACAGTTGTCG+AGG - chr6_3:93903234-93903253 None:intergenic 55.0%
TGCCGCTGAGAAGGAAACAG+AGG + chr6_3:93903286-93903305 Msa0965960:five_prime_UTR 55.0%
CGCCTCTGTTTCCTTCTCAG+CGG - chr6_3:93903291-93903310 None:intergenic 55.0%
CGCTGAGAAGGAAACAGAGG+CGG + chr6_3:93903289-93903308 Msa0965960:five_prime_UTR 55.0%
! AACTGACTCACCGGTTGACG+TGG + chr6_3:93903406-93903425 Msa0965960:five_prime_UTR 55.0%
CCTGGTGTTTCTTGAGGAGC+TGG - chr6_3:93903614-93903633 None:intergenic 55.0%
CCAGCTCCTCAAGAAACACC+AGG + chr6_3:93903611-93903630 Msa0965960:five_prime_UTR 55.0%
GTGGCAGGACTTTCAGGAGA+GGG - chr6_3:93904017-93904036 None:intergenic 55.0%
AGTGGCAGGACTTTCAGGAG+AGG - chr6_3:93904018-93904037 None:intergenic 55.0%
TCTTGCACCTCTTCAGTGGC+AGG - chr6_3:93904032-93904051 None:intergenic 55.0%
ATGTCTGTTCCGCTGCCCTT+TGG + chr6_3:93904625-93904644 Msa0965960:intron 55.0%
TGCTGCAATCCAAAGGGCAG+CGG - chr6_3:93904637-93904656 None:intergenic 55.0%
GCAACTGCCGAAGGAAGGAT+AGG + chr6_3:93904816-93904835 Msa0965960:five_prime_UTR 55.0%
TGTTCGGTTCAACCTCGGAG+AGG + chr6_3:93905222-93905241 Msa0965960:CDS 55.0%
GTTCGGTTCAACCTCGGAGA+GGG + chr6_3:93905223-93905242 Msa0965960:CDS 55.0%
GTTCAACCTCGGAGAGGGTT+TGG + chr6_3:93905228-93905247 Msa0965960:CDS 55.0%
AGTAGTGGTCTCAGCCGCTT+TGG + chr6_3:93906309-93906328 Msa0965960:CDS 55.0%
CTACGAGAAGAAACCGGTGC+AGG + chr6_3:93906340-93906359 Msa0965960:CDS 55.0%
AGAAACCGGTGCAGGGATGA+TGG + chr6_3:93906348-93906367 Msa0965960:CDS 55.0%
ACAGTCCATCATCCCTGCAC+CGG - chr6_3:93906356-93906375 None:intergenic 55.0%
TCCTTCAGCTGCCAGTCTTC+CGG - chr6_3:93906467-93906486 None:intergenic 55.0%
! GCAAGTTGCTGCTTGTCCAC+AGG + chr6_3:93906603-93906622 Msa0965960:CDS 55.0%
! GGTTCCCGGGGCAGCTTTTA+CGG + chr6_3:93902494-93902513 Msa0965960:five_prime_UTR 60.0%
! GTTCCCGGGGCAGCTTTTAC+GGG + chr6_3:93902495-93902514 Msa0965960:five_prime_UTR 60.0%
! TTCCCGGGGCAGCTTTTACG+GGG + chr6_3:93902496-93902515 Msa0965960:five_prime_UTR 60.0%
TTCCCCGTAAAAGCTGCCCC+GGG - chr6_3:93902501-93902520 None:intergenic 60.0%
!! CAGAGAAATCCGGCTCTGGG+AGG + chr6_3:93902754-93902773 Msa0965960:five_prime_UTR 60.0%
!! AGAAATCCGGCTCTGGGAGG+TGG + chr6_3:93902757-93902776 Msa0965960:five_prime_UTR 60.0%
!! GAAATCCGGCTCTGGGAGGT+GGG + chr6_3:93902758-93902777 Msa0965960:five_prime_UTR 60.0%
AGAATCCCACCTCCCAGAGC+CGG - chr6_3:93902766-93902785 None:intergenic 60.0%
CTTCGGGACGAAACAGGAGC+TGG + chr6_3:93904684-93904703 Msa0965960:five_prime_UTR 60.0%
CCTTCCTTCGGCAGTTGCTC+TGG - chr6_3:93904814-93904833 None:intergenic 60.0%
CCAGAGCAACTGCCGAAGGA+AGG + chr6_3:93904811-93904830 Msa0965960:five_prime_UTR 60.0%
GCAGCAGGCTCCTCTTTCAC+TGG - chr6_3:93905319-93905338 None:intergenic 60.0%
TCCGGAAGACTGGCAGCTGA+AGG + chr6_3:93906463-93906482 Msa0965960:CDS 60.0%
GCAGCCAGAGCAACTGCCGA+AGG + chr6_3:93904807-93904826 Msa0965960:five_prime_UTR 65.0%
TCCTTGGCTTCTGCGGCAGC+AGG - chr6_3:93905334-93905353 None:intergenic 65.0%
GGGGCACGCAGCCACTTGCA+TGG - chr6_3:93904946-93904965 None:intergenic 70.0%
GCCTGCTGCCGCAGAAGCCA+AGG + chr6_3:93905330-93905349 Msa0965960:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 93901868 93907305 93901868 ID=Msa0965960;Name=Msa0965960
chr6_3 mRNA 93901868 93907305 93901868 ID=Msa0965960-mRNA-1;Parent=Msa0965960;Name=Msa0965960-mRNA-1;_AED=0.04;_eAED=0.04;_QI=2405|1|1|1|1|0.8|5|372|322
chr6_3 exon 93901868 93903632 93901868 ID=Msa0965960-mRNA-1:exon:17242;Parent=Msa0965960-mRNA-1
chr6_3 exon 93903794 93903868 93903794 ID=Msa0965960-mRNA-1:exon:17243;Parent=Msa0965960-mRNA-1
chr6_3 exon 93903988 93904176 93903988 ID=Msa0965960-mRNA-1:exon:17244;Parent=Msa0965960-mRNA-1
chr6_3 exon 93904655 93905365 93904655 ID=Msa0965960-mRNA-1:exon:17245;Parent=Msa0965960-mRNA-1
chr6_3 exon 93906300 93907305 93906300 ID=Msa0965960-mRNA-1:exon:17246;Parent=Msa0965960-mRNA-1
chr6_3 five_prime_UTR 93901868 93903632 93901868 ID=Msa0965960-mRNA-1:five_prime_utr;Parent=Msa0965960-mRNA-1
chr6_3 five_prime_UTR 93903794 93903868 93903794 ID=Msa0965960-mRNA-1:five_prime_utr;Parent=Msa0965960-mRNA-1
chr6_3 five_prime_UTR 93903988 93904176 93903988 ID=Msa0965960-mRNA-1:five_prime_utr;Parent=Msa0965960-mRNA-1
chr6_3 five_prime_UTR 93904655 93905030 93904655 ID=Msa0965960-mRNA-1:five_prime_utr;Parent=Msa0965960-mRNA-1
chr6_3 CDS 93905031 93905365 93905031 ID=Msa0965960-mRNA-1:cds;Parent=Msa0965960-mRNA-1
chr6_3 CDS 93906300 93906933 93906300 ID=Msa0965960-mRNA-1:cds;Parent=Msa0965960-mRNA-1
chr6_3 three_prime_UTR 93906934 93907305 93906934 ID=Msa0965960-mRNA-1:three_prime_utr;Parent=Msa0965960-mRNA-1
Gene Sequence

>Msa0965960

ATGCAAAAAGAAGATCTTGCGTCAAAACCGGAGCAAATTAGATCAAGGATTGTTGAAGGACGGATAAGGAAAAGACTTGAGGATTTAGCATTGCTTGAGCAGCCCTACATCAAGAATGATAAAGTGACAGTAAAGGATATGGTTAAGCAGACAATTGCAACTATTGGAGAAAATATGAAAGTTACAAGGTTTGTTCGGTTCAACCTCGGAGAGGGTTTGGAAAAGAAAAGCGAGGATTTTGCTGCTGAAGTCGCTGCACAAACTACAGCAAAACCGGTAACTACTCCAGTGAAAGAGGAGCCTGCTGCCGCAGAAGCCAAGGAGACTGAACCAAAGAAATCAGCAGTAGTGGTCTCAGCCGCTTTGGTTAAGCAACTACGAGAAGAAACCGGTGCAGGGATGATGGACTGTAAGAAAGCCCTTGCTGAAACTGAAGGTGATCTTGAAAAGGCGCAAGCATACCTCAGGAAAAAGGGCCTCTCATCCGCTGATAAGAAATCCGGAAGACTGGCAGCTGAAGGAAGAATCGGTACATACATTCACGATGCACGCATTGGTGTTCTAATTGAAGTGAACTGTGAAACCGACTTTGTTGGCAGAAGTGAGAAATTCAAGGAGTTGGTTGATGATCTTGCAATGCAAGTTGCTGCTTGTCCACAGGTTCAGTTTGTATCTATTGAAGATATTCCCGAAACTATTGTGACGAAGGAAAAAGAACTTGAGATGCAAAGAGAAGACCTTGCTTCGAAACCCGAGAACATTAGGGAGAAAATTGTCGAGGGAAGAATCTCAAAGAGGTTAGGAGAGCTTGCTCTTCTAGAGCAGCCTTTTATTAAGGATGACAGTGTTATAGTGAAAGACTTGGTTAGGCAAAGTATAGCTGCTATTGGAGAGAATATTAAAGTGCGGCGTTTTGTTCGGTTCACTCTTGGAGAAACAGTTCAAAAAGAAACAGCTGTACCAGCATAG
Protein sequence

>Msa0965960

MQKEDLASKPEQIRSRIVEGRIRKRLEDLALLEQPYIKNDKVTVKDMVKQTIATIGENMKVTRFVRFNLGEGLEKKSEDFAAEVAAQTTAKPVTTPVKEEPAAAEAKETEPKKSAVVVSAALVKQLREETGAGMMDCKKALAETEGDLEKAQAYLRKKGLSSADKKSGRLAAEGRIGTYIHDARIGVLIEVNCETDFVGRSEKFKELVDDLAMQVAACPQVQFVSIEDIPETIVTKEKELEMQREDLASKPENIREKIVEGRISKRLGELALLEQPFIKDDSVIVKDLVRQSIAAIGENIKVRRFVRFTLGETVQKETAVPA*