AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0035080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0035080 MtrunA17_Chr1g0197361 89.216 612 43 4 53 664 1 589 0.0 1113
Msa0035080 MtrunA17_Chr3g0092671 63.175 611 149 12 57 664 2 539 0.0 733
Msa0035080 MtrunA17_Chr1g0197351 56.931 202 74 4 61 258 43 235 3.43e-66 225
Msa0035080 MtrunA17_Chr8g0364791 52.486 181 76 2 62 242 8 178 1.74e-64 219
Msa0035080 MtrunA17_Chr3g0130101 50.490 204 85 4 62 260 9 201 5.13e-63 213
Msa0035080 MtrunA17_Chr8g0384201 49.727 183 78 3 62 242 8 178 6.63e-60 208
Msa0035080 MtrunA17_Chr2g0309891 52.941 187 78 4 62 247 8 185 3.08e-58 200
Msa0035080 MtrunA17_Chr1g0201021 54.749 179 71 3 62 240 21 189 8.89e-57 202
Msa0035080 MtrunA17_Chr3g0109821 54.913 173 64 4 62 231 8 169 1.47e-52 192
Msa0035080 MtrunA17_Chr6g0481091 53.704 162 63 3 62 222 8 158 9.46e-52 179
Msa0035080 MtrunA17_Chr5g0433781 50.777 193 78 5 62 247 8 190 2.57e-51 188
Msa0035080 MtrunA17_Chr5g0400461 49.398 166 64 3 62 220 8 160 3.16e-47 169
Msa0035080 MtrunA17_Chr3g0128111 50.314 159 69 2 63 221 45 193 5.63e-47 166
Msa0035080 MtrunA17_Chr4g0060931 46.907 194 80 6 62 249 19 195 8.63e-47 169
Msa0035080 MtrunA17_Chr3g0091921 42.291 227 118 6 49 274 5 219 1.62e-46 167
Msa0035080 MtrunA17_Chr4g0054791 50.877 171 69 6 53 220 1 159 4.90e-46 166
Msa0035080 MtrunA17_Chr6g0484441 49.375 160 67 3 62 221 7 152 5.35e-46 166
Msa0035080 MtrunA17_Chr3g0139331 52.071 169 61 5 62 226 13 165 6.67e-46 166
Msa0035080 MtrunA17_Chr5g0428991 49.367 158 70 2 63 220 28 175 2.11e-45 171
Msa0035080 MtrunA17_Chr1g0147421 47.305 167 73 3 62 226 29 182 6.10e-45 164
Msa0035080 MtrunA17_Chr3g0128151 49.686 159 70 2 63 221 25 173 1.02e-44 169
Msa0035080 MtrunA17_Chr7g0217721 45.550 191 94 4 49 232 8 195 4.67e-44 161
Msa0035080 MtrunA17_Chr6g0453451 42.500 200 99 6 62 261 22 205 1.33e-43 159
Msa0035080 MtrunA17_Chr4g0018391 46.875 160 72 4 62 220 9 156 2.08e-43 159
Msa0035080 MtrunA17_Chr4g0042561 46.061 165 77 4 62 224 11 165 2.27e-43 157
Msa0035080 MtrunA17_Chr2g0316971 47.647 170 67 6 62 224 25 179 3.02e-43 160
Msa0035080 MtrunA17_Chr4g0056541 44.444 171 82 4 62 231 9 167 4.57e-43 159
Msa0035080 MtrunA17_Chr3g0124761 47.561 164 72 6 62 223 9 160 7.88e-43 156
Msa0035080 MtrunA17_Chr8g0346001 45.000 160 86 2 62 220 17 175 8.25e-43 160
Msa0035080 MtrunA17_Chr2g0318081 46.061 165 77 3 62 226 18 170 1.03e-42 157
Msa0035080 MtrunA17_Chr4g0017921 46.250 160 72 3 62 220 10 156 1.17e-42 157
Msa0035080 MtrunA17_Chr2g0309331 43.333 180 83 5 62 239 12 174 5.85e-42 155
Msa0035080 MtrunA17_Chr7g0217711 51.020 147 69 2 49 195 8 151 1.14e-41 149
Msa0035080 MtrunA17_Chr5g0398971 46.584 161 73 5 62 220 9 158 1.33e-41 154
Msa0035080 MtrunA17_Chr7g0252971 38.208 212 107 6 62 259 10 211 1.54e-41 154
Msa0035080 MtrunA17_Chr8g0361731 40.000 185 104 4 62 242 16 197 2.45e-41 155
Msa0035080 MtrunA17_Chr5g0417791 46.541 159 77 4 62 220 5 155 2.70e-41 151
Msa0035080 MtrunA17_Chr8g0372121 38.235 204 111 6 62 262 8 199 3.61e-41 152
Msa0035080 MtrunA17_Chr8g0384721 44.767 172 81 6 53 222 1 160 3.80e-41 151
Msa0035080 MtrunA17_Chr2g0318101 45.181 166 84 4 62 223 17 179 6.64e-41 152
Msa0035080 MtrunA17_Chr5g0405211 44.375 160 76 3 62 220 10 157 6.80e-41 152
Msa0035080 MtrunA17_Chr6g0461661 49.080 163 67 6 63 221 21 171 1.82e-40 152
Msa0035080 MtrunA17_Chr7g0263931 44.910 167 76 6 62 223 13 168 4.45e-40 149
Msa0035080 MtrunA17_Chr1g0200561 43.452 168 82 4 62 228 21 176 4.56e-40 150
Msa0035080 MtrunA17_Chr7g0214071 43.386 189 87 6 62 247 17 188 1.18e-39 146
Msa0035080 MtrunA17_Chr2g0311651 44.444 171 87 4 62 226 24 192 1.35e-39 147
Msa0035080 MtrunA17_Chr5g0417001 43.114 167 83 5 62 223 16 175 3.12e-39 149
Msa0035080 MtrunA17_Chr4g0047841 43.820 178 81 4 62 223 17 191 3.61e-39 147
Msa0035080 MtrunA17_Chr7g0253011 47.590 166 69 6 62 221 19 172 3.99e-39 148
Msa0035080 MtrunA17_Chr8g0359921 43.636 165 83 3 62 226 16 170 8.87e-39 146
Msa0035080 MtrunA17_Chr2g0311661 43.860 171 88 4 62 226 23 191 1.12e-38 144
Msa0035080 MtrunA17_Chr3g0130731 45.122 164 76 6 62 223 9 160 2.21e-38 144
Msa0035080 MtrunA17_Chr2g0312321 46.584 161 71 5 62 221 13 159 2.57e-38 144
Msa0035080 MtrunA17_Chr6g0453131 39.665 179 102 4 62 238 17 191 2.59e-38 146
Msa0035080 MtrunA17_Chr2g0326361 40.722 194 90 7 62 250 16 189 4.49e-38 144
Msa0035080 MtrunA17_Chr1g0183741 45.342 161 70 4 62 220 12 156 8.52e-38 141
Msa0035080 MtrunA17_Chr7g0261411 45.283 159 69 4 62 218 12 154 3.46e-37 140
Msa0035080 MtrunA17_Chr8g0345671 55.556 126 53 2 63 186 14 138 4.10e-37 143
Msa0035080 MtrunA17_Chr5g0442771 41.667 168 92 3 62 226 20 184 5.21e-37 140
Msa0035080 MtrunA17_Chr3g0144271 50.388 129 60 2 62 188 25 151 6.97e-37 143
Msa0035080 MtrunA17_Chr8g0345691 46.203 158 68 4 63 218 15 157 1.51e-36 142
Msa0035080 MtrunA17_Chr4g0076731 38.889 162 84 4 62 222 56 203 1.96e-36 142
Msa0035080 MtrunA17_Chr4g0038751 41.212 165 77 4 62 223 17 164 1.35e-35 136
Msa0035080 MtrunA17_Chr8g0345711 41.975 162 85 5 63 218 15 173 1.28e-33 126
Msa0035080 MtrunA17_Chr8g0345731 45.736 129 64 3 63 186 27 154 6.43e-31 119
Msa0035080 MtrunA17_Chr2g0321741 42.029 138 62 3 80 217 12 131 1.92e-30 123
Msa0035080 MtrunA17_Chr3g0131911 39.080 174 88 6 62 228 16 178 7.82e-30 118
Msa0035080 MtrunA17_Chr8g0385991 38.235 170 92 5 62 228 16 175 9.31e-30 117
Msa0035080 MtrunA17_Chr3g0113001 38.202 178 101 3 109 284 11 181 1.53e-28 116
Msa0035080 MtrunA17_Chr4g0026141 38.323 167 90 4 62 223 7 165 3.24e-28 114
Msa0035080 MtrunA17_Chr8g0345721 39.355 155 62 3 63 186 38 191 3.38e-28 112
Msa0035080 MtrunA17_Chr8g0345701 44.286 140 59 4 63 186 10 146 5.40e-28 110
Msa0035080 MtrunA17_Chr1g0194791 63.291 79 28 1 31 109 18 95 2.44e-27 106
Msa0035080 MtrunA17_Chr8g0345741 44.068 118 63 2 71 186 2 118 2.89e-27 108
Msa0035080 MtrunA17_Chr3g0113031 39.752 161 89 4 126 284 3 157 1.68e-26 109
Msa0035080 MtrunA17_Chr2g0321631 34.940 166 98 5 62 223 6 165 4.69e-26 107
Msa0035080 MtrunA17_Chr7g0266701 36.310 168 91 7 62 221 6 165 5.30e-26 107
Msa0035080 MtrunA17_Chr4g0050701 35.542 166 81 7 62 220 13 159 1.67e-24 101
Msa0035080 MtrunA17_Chr7g0243371 50.685 73 34 1 118 188 19 91 3.07e-20 86.7
Msa0035080 MtrunA17_Chr8g0384351 31.765 170 78 7 62 228 12 146 2.85e-16 77.4
Msa0035080 MtrunA17_Chr3g0130321 29.814 161 101 5 62 219 9 160 8.74e-16 76.6
Msa0035080 MtrunA17_Chr7g0251651 31.496 127 78 5 63 186 21 141 2.79e-14 72.0
Msa0035080 MtrunA17_Chr7g0251661 28.571 126 83 4 63 186 13 133 9.26e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0035080 AT3G10500.1 37.598 641 261 22 54 656 3 542 2.78e-96 307
Msa0035080 AT5G04410.1 63.768 207 65 2 54 260 3 199 2.99e-85 279
Msa0035080 AT5G04410.1 29.730 296 168 12 367 656 299 560 5.42e-18 88.2
Msa0035080 AT3G10480.1 58.201 189 69 3 61 249 28 206 3.06e-70 235
Msa0035080 AT3G10480.2 57.216 194 72 3 56 249 23 205 8.19e-70 234
Msa0035080 AT3G10490.1 57.672 189 70 3 61 249 28 206 1.92e-69 226
Msa0035080 AT3G10490.2 58.730 189 68 4 61 249 28 206 2.53e-68 230
Msa0035080 AT3G10480.3 49.550 222 69 4 61 249 28 239 2.38e-63 219
Msa0035080 AT5G09330.5 49.321 221 95 6 61 281 7 210 6.57e-62 214
Msa0035080 AT5G09330.2 49.321 221 95 6 61 281 7 210 6.57e-62 214
Msa0035080 AT5G09330.4 49.321 221 95 6 61 281 7 210 6.57e-62 214
Msa0035080 AT5G09330.3 49.321 221 95 6 61 281 7 210 6.57e-62 214
Msa0035080 AT5G09330.1 49.321 221 95 6 61 281 7 210 6.57e-62 214
Msa0035080 AT5G64060.1 51.075 186 81 2 61 246 7 182 1.35e-58 201
Msa0035080 AT1G34190.1 45.022 231 94 4 59 289 15 212 5.13e-58 205
Msa0035080 AT1G34180.3 44.643 224 112 3 59 280 15 228 1.27e-57 201
Msa0035080 AT1G34180.1 50.549 182 80 2 59 240 15 186 1.38e-56 202
Msa0035080 AT1G34180.4 42.373 236 112 4 59 280 15 240 2.79e-54 192
Msa0035080 AT1G34180.2 42.373 236 112 4 59 280 15 240 2.24e-53 193
Msa0035080 AT1G32870.2 54.286 175 70 3 62 236 12 176 1.68e-52 189
Msa0035080 AT1G32870.1 54.286 175 70 3 62 236 12 176 1.94e-52 189
Msa0035080 AT1G65910.1 53.801 171 67 3 62 231 8 167 2.77e-52 191
Msa0035080 AT1G32870.3 54.286 175 70 3 62 236 48 212 5.08e-52 189
Msa0035080 AT3G17730.1 52.795 161 66 2 62 222 8 158 3.19e-51 178
Msa0035080 AT5G46590.1 52.174 161 67 3 62 221 8 159 1.15e-50 178
Msa0035080 AT3G03200.1 53.459 159 65 2 62 220 8 157 1.63e-50 183
Msa0035080 AT5G17260.1 50.943 159 69 2 62 220 8 157 1.01e-48 178
Msa0035080 AT5G46590.2 54.610 141 62 2 62 201 8 147 2.35e-48 171
Msa0035080 AT1G54330.1 51.205 166 68 2 62 227 8 160 2.30e-47 169
Msa0035080 AT4G17980.1 53.416 161 65 4 62 220 8 160 2.73e-47 168
Msa0035080 AT4G17980.2 53.086 162 66 4 62 221 8 161 4.52e-47 168
Msa0035080 AT5G61430.1 49.102 167 71 4 62 226 18 172 3.00e-46 167
Msa0035080 AT1G71930.2 46.875 160 72 3 62 220 11 158 4.14e-45 164
Msa0035080 AT1G71930.1 46.875 160 72 3 62 220 11 158 4.14e-45 164
Msa0035080 AT1G33060.2 50.633 158 68 2 63 220 27 174 4.17e-45 171
Msa0035080 AT1G33060.1 50.633 158 68 2 63 220 27 174 4.92e-45 171
Msa0035080 AT2G46770.1 45.122 164 84 3 62 220 18 180 7.42e-45 164
Msa0035080 AT4G35580.1 51.266 158 67 2 63 220 12 159 8.77e-45 167
Msa0035080 AT3G18400.1 47.879 165 73 3 62 226 7 158 1.01e-44 162
Msa0035080 AT4G35580.3 51.266 158 67 2 63 220 12 159 1.13e-44 168
Msa0035080 AT4G35580.2 51.266 158 67 2 63 220 12 159 1.21e-44 167
Msa0035080 AT3G61910.1 44.848 165 85 3 62 221 13 176 1.38e-44 162
Msa0035080 AT5G07680.2 47.879 165 76 4 62 226 5 159 2.77e-44 161
Msa0035080 AT5G39610.1 47.879 165 76 3 62 226 22 176 2.92e-44 160
Msa0035080 AT5G07680.1 47.879 165 76 4 62 226 19 173 3.62e-44 161
Msa0035080 AT3G49530.2 47.170 159 73 3 63 220 16 164 1.15e-43 162
Msa0035080 AT1G69490.1 45.087 173 83 4 62 232 11 173 3.04e-43 157
Msa0035080 AT3G49530.1 47.170 159 73 3 63 220 16 164 3.89e-43 162
Msa0035080 AT3G15170.1 48.795 166 67 5 62 222 22 174 4.02e-43 158
Msa0035080 AT2G18060.3 42.778 180 89 4 62 239 11 178 5.62e-43 159
Msa0035080 AT2G18060.1 42.778 180 89 4 62 239 11 178 5.62e-43 159
Msa0035080 AT2G24430.2 46.512 172 67 5 62 226 18 171 7.71e-43 157
Msa0035080 AT2G24430.1 46.512 172 67 5 62 226 18 171 7.71e-43 157
Msa0035080 AT3G44290.2 47.436 156 64 3 62 217 16 153 8.91e-43 154
Msa0035080 AT1G32510.1 43.429 175 83 3 62 229 8 173 9.83e-43 156
Msa0035080 AT1G12260.2 47.500 160 71 4 62 220 9 156 1.11e-42 157
Msa0035080 AT4G10350.1 46.250 160 75 3 62 220 11 160 1.36e-42 157
Msa0035080 AT1G12260.1 47.500 160 71 4 62 220 9 156 1.42e-42 159
Msa0035080 AT1G01720.1 42.132 197 96 7 62 252 9 193 1.63e-42 155
Msa0035080 AT5G24590.2 49.068 161 67 4 63 220 16 164 1.93e-42 160
Msa0035080 AT5G53950.1 46.552 174 71 6 55 221 12 170 2.43e-42 157
Msa0035080 AT5G22290.1 44.970 169 74 5 49 217 12 161 4.52e-42 156
Msa0035080 AT2G27300.1 53.600 125 56 2 62 186 16 138 4.61e-42 155
Msa0035080 AT3G04070.2 47.273 165 77 5 62 221 12 171 6.60e-42 155
Msa0035080 AT3G44290.1 47.436 156 64 3 62 217 16 153 8.29e-42 155
Msa0035080 AT3G29035.1 46.067 178 76 5 62 234 26 188 8.86e-42 154
Msa0035080 AT5G18270.1 49.693 163 67 5 62 221 23 173 9.25e-42 155
Msa0035080 AT1G62700.1 44.318 176 83 5 62 234 9 172 1.38e-41 156
Msa0035080 AT1G62700.2 44.318 176 83 5 62 234 9 172 1.38e-41 156
Msa0035080 AT1G33280.1 45.625 160 73 3 62 220 10 156 1.42e-41 153
Msa0035080 AT5G18270.2 50.307 163 66 5 62 221 23 173 1.93e-41 154
Msa0035080 AT5G62380.2 46.914 162 69 5 62 220 9 156 3.31e-41 154
Msa0035080 AT5G62380.1 46.914 162 69 5 62 220 9 156 3.31e-41 154
Msa0035080 AT1G76420.1 45.122 164 73 5 62 222 24 173 3.88e-41 153
Msa0035080 AT1G26870.1 43.902 164 87 3 62 223 18 178 4.78e-41 155
Msa0035080 AT3G04060.1 48.447 161 72 4 62 221 22 172 6.16e-41 152
Msa0035080 AT4G36160.1 41.436 181 91 4 62 239 12 180 8.83e-41 153
Msa0035080 AT4G36160.3 41.436 181 91 4 62 239 12 180 8.83e-41 153
Msa0035080 AT4G36160.2 41.436 181 91 4 62 239 16 184 8.89e-41 153
Msa0035080 AT3G04070.1 31.940 335 186 11 62 367 12 333 1.89e-40 152
Msa0035080 AT1G61110.1 46.386 166 82 4 62 223 18 180 2.37e-40 150
Msa0035080 AT5G66300.1 41.954 174 89 3 62 234 14 176 2.68e-40 149
Msa0035080 AT5G08790.1 47.205 161 77 5 63 223 10 162 2.99e-40 149
Msa0035080 AT2G43000.1 43.210 162 81 3 62 223 20 170 4.63e-40 148
Msa0035080 AT1G79580.3 44.099 161 75 4 62 220 19 166 5.84e-40 150
Msa0035080 AT1G79580.5 44.099 161 75 4 62 220 19 166 5.84e-40 150
Msa0035080 AT1G79580.4 44.099 161 75 4 62 220 19 166 5.84e-40 150
Msa0035080 AT1G79580.2 44.099 161 75 4 62 220 19 166 5.84e-40 150
Msa0035080 AT1G79580.1 44.099 161 75 4 62 220 19 166 5.84e-40 150
Msa0035080 AT1G56010.2 40.306 196 109 2 62 257 21 208 9.07e-40 149
Msa0035080 AT3G15500.1 44.848 165 79 3 62 226 16 168 9.54e-40 149
Msa0035080 AT4G27410.2 45.000 160 76 3 62 221 16 163 1.24e-39 148
Msa0035080 AT1G52890.1 43.030 165 82 3 62 226 16 168 1.46e-39 148
Msa0035080 AT1G32770.1 42.169 166 83 4 62 220 18 177 2.59e-39 149
Msa0035080 AT3G12977.1 42.945 163 82 3 62 224 20 171 2.62e-39 146
Msa0035080 AT5G39820.1 42.373 177 83 5 62 223 22 194 4.05e-39 147
Msa0035080 AT5G63790.1 43.902 164 84 4 63 226 53 208 1.14e-38 145
Msa0035080 AT5G63790.2 43.902 164 84 4 63 226 63 218 1.33e-38 145
Msa0035080 AT1G77450.1 44.172 163 77 6 62 222 12 162 3.05e-38 142
Msa0035080 AT5G04395.1 46.497 157 66 4 62 204 30 182 5.66e-38 139
Msa0035080 AT2G17040.1 42.424 165 75 4 62 223 8 155 1.36e-37 141
Msa0035080 AT4G27410.3 40.571 175 79 3 62 221 16 180 1.77e-37 142
Msa0035080 AT3G15510.1 43.827 162 84 4 64 221 21 179 4.56e-37 142
Msa0035080 AT3G12910.1 43.023 172 88 5 62 226 23 191 1.33e-36 139
Msa0035080 AT2G02450.1 39.506 162 83 4 62 222 53 200 1.41e-36 141
Msa0035080 AT2G33480.1 45.399 163 72 4 62 223 17 163 1.54e-36 138
Msa0035080 AT2G02450.2 39.506 162 83 4 62 222 53 200 1.65e-36 142
Msa0035080 AT2G33480.2 45.062 162 72 4 62 223 17 161 2.03e-36 138
Msa0035080 AT5G13180.1 41.209 182 87 5 49 227 3 167 2.45e-36 137
Msa0035080 AT4G28530.1 40.678 177 71 5 62 220 12 172 3.47e-34 134
Msa0035080 AT1G52880.1 43.114 167 81 5 64 223 21 180 1.21e-31 125
Msa0035080 AT3G10490.4 58.095 105 35 3 136 240 2 97 4.65e-31 125
Msa0035080 AT3G10490.3 58.095 105 35 3 136 240 2 97 4.65e-31 125
Msa0035080 AT4G01520.1 42.308 130 71 2 63 188 7 136 2.10e-30 122
Msa0035080 AT5G61430.2 49.123 114 51 1 113 226 3 109 2.65e-30 120
Msa0035080 AT4G01540.3 43.846 130 69 2 63 188 7 136 3.35e-30 124
Msa0035080 AT4G01540.4 43.846 130 69 2 63 188 7 136 3.80e-30 123
Msa0035080 AT4G01540.2 43.846 130 69 2 63 188 7 136 4.80e-30 123
Msa0035080 AT4G01540.1 43.846 130 69 2 63 188 7 136 7.64e-30 124
Msa0035080 AT4G10350.2 46.602 103 46 1 118 220 20 113 8.13e-27 111
Msa0035080 AT3G12977.2 45.370 108 51 1 118 225 20 119 8.68e-27 109
Msa0035080 AT4G01550.1 35.593 177 95 3 63 234 7 169 2.38e-26 113
Msa0035080 AT1G56010.1 39.286 140 79 1 118 257 8 141 4.45e-26 108
Msa0035080 AT3G04420.2 40.800 125 73 1 63 186 6 130 6.53e-26 108
Msa0035080 AT1G02230.1 41.406 128 68 3 63 186 6 130 7.09e-26 110
Msa0035080 AT1G02250.1 32.927 246 127 9 63 293 6 228 9.04e-26 109
Msa0035080 AT5G22380.1 33.939 165 98 5 63 223 8 165 1.04e-25 106
Msa0035080 AT3G04420.1 40.800 125 73 1 63 186 6 130 1.97e-25 108
Msa0035080 AT3G44350.2 32.317 164 100 4 63 223 8 163 3.89e-25 105
Msa0035080 AT3G44350.1 35.115 131 82 3 63 190 8 138 5.82e-23 96.3
Msa0035080 AT2G33480.3 44.860 107 48 2 118 223 10 106 6.23e-22 95.1
Msa0035080 AT4G28530.2 45.370 108 40 3 62 153 12 116 5.13e-21 94.7
Msa0035080 AT1G02220.1 36.800 125 75 2 63 186 6 127 8.98e-21 95.5
Msa0035080 AT1G01010.1 32.317 164 86 4 63 217 6 153 2.81e-20 94.4
Msa0035080 AT5G64530.1 31.953 169 93 6 62 223 5 158 1.02e-19 87.8
Msa0035080 AT5G64530.2 36.641 131 66 5 62 190 5 120 7.03e-19 84.7
Msa0035080 AT2G43000.2 39.362 94 49 1 127 220 4 89 4.23e-18 83.6
Msa0035080 AT5G22290.2 46.053 76 26 2 142 217 2 62 1.00e-16 80.5
Msa0035080 AT2G18060.2 36.364 99 51 2 142 239 3 90 1.88e-16 80.5
Msa0035080 AT3G04430.1 32.576 132 76 4 66 186 6 135 1.26e-15 76.3
Msa0035080 AT3G10500.2 35.758 165 71 7 502 656 269 408 7.73e-14 74.3
Msa0035080 AT3G55210.1 29.861 144 88 3 57 188 8 150 1.90e-13 71.6
Msa0035080 AT3G56530.1 33.071 127 81 4 62 186 54 178 4.51e-13 71.2
Msa0035080 AT5G14000.2 31.387 137 85 4 63 196 18 148 7.33e-13 67.4

Find 197 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTACTTTGGTGCCTATTTC+TGG 0.060133 1_1:+63136550 Msa0035080:CDS
TTTGAAATTGATGAGAAATT+TGG 0.111696 1_1:-63133923 None:intergenic
AGGATCTAGCAGCGCCAAAT+TGG 0.239815 1_1:+63136121 Msa0035080:CDS
AGAATCCAAGCATATATATT+TGG 0.264088 1_1:-63135868 None:intergenic
AGCACTTCCAACTGTGTTAC+TGG 0.265170 1_1:-63135439 None:intergenic
TTGAAATTGATGAGAAATTT+GGG 0.274357 1_1:-63133922 None:intergenic
CCGTACTTCTCCCCATTCTT+AGG 0.288710 1_1:-63134737 None:intergenic
GTCAAATCAGTAAGATAATC+AGG 0.296588 1_1:-63135720 None:intergenic
AATGAACCTTTGAAACTAGA+AGG 0.304326 1_1:+63134827 Msa0035080:CDS
GAGGAGGAATGGGAGAATTT+TGG 0.305278 1_1:+63134773 Msa0035080:CDS
GATCGGAAGCTTCATGTATA+CGG 0.313669 1_1:+63136663 Msa0035080:CDS
GAAGCAAGAGGGTAAATTTC+CGG 0.313971 1_1:-63134063 None:intergenic
CTTCAATCCAACTTCTGTTA+TGG 0.317313 1_1:+63135465 Msa0035080:CDS
TAAAATTGTGAGAAGATTCT+AGG 0.323338 1_1:-63133839 None:intergenic
CTACAGACCAAGCCAGAAAT+AGG 0.332472 1_1:-63136562 None:intergenic
ATCACGATTCTTAATATCAT+TGG 0.337803 1_1:-63135760 None:intergenic
CTGTAACCTGAGACCCAATT+TGG 0.341180 1_1:-63136135 None:intergenic
GATGAGATTTGTGTTTGTTT+TGG 0.344753 1_1:+63134661 Msa0035080:intron
ATCTTCGAGAAGAGTGGTTC+GGG 0.351910 1_1:+63134713 Msa0035080:CDS
TGATGAGAAATTTGGGACTT+AGG 0.354472 1_1:-63133915 None:intergenic
TTTGGTGCCTATTTCTGGCT+TGG 0.358034 1_1:+63136555 Msa0035080:CDS
GAAGCTGAAGACAAGGGATT+TGG 0.364928 1_1:+63134246 Msa0035080:CDS
CTCCCTTTGTTGAGGAGGAA+TGG 0.367626 1_1:+63134762 Msa0035080:CDS
TGCAGTTATATGAGCTGAAT+TGG 0.369810 1_1:-63136407 None:intergenic
GGCTGTCCATAGCTGGGAAT+GGG 0.371810 1_1:-63135915 None:intergenic
TAGCAGAGTTAACATCAGTT+TGG 0.372184 1_1:-63136531 None:intergenic
ATTTATGTTATCACATGGTT+GGG 0.372906 1_1:+63136594 Msa0035080:CDS
ATTAGATAAGAAACATGTTT+GGG 0.373889 1_1:-63133876 None:intergenic
GTAAATGACAAATGCAAGTT+TGG 0.375294 1_1:+63136686 Msa0035080:exon
AGCAGAGTTAACATCAGTTT+GGG 0.377160 1_1:-63136530 None:intergenic
TTTAACACCGTTATGTCTAC+TGG 0.378066 1_1:+63136502 Msa0035080:CDS
TACGTTCATTAATAAATGCT+TGG 0.378930 1_1:-63135515 None:intergenic
AATAATATATCTGATCTATA+TGG 0.379133 1_1:+63135588 Msa0035080:CDS
TATAGATCAGATATATTATT+AGG 0.379942 1_1:-63135585 None:intergenic
TTCAAAGGTTCATTATCAAC+AGG 0.383389 1_1:-63134818 None:intergenic
CTGCTAAGGAGTTGGCTTGT+GGG 0.383688 1_1:+63136362 Msa0035080:CDS
TGATGTTAACTCTGCTACTT+TGG 0.392276 1_1:+63136537 Msa0035080:CDS
AATTAGATAAGAAACATGTT+TGG 0.399685 1_1:-63133877 None:intergenic
CTAAGAATGGGGAGAAGTAC+GGG 0.400942 1_1:+63134738 Msa0035080:CDS
AGAAGTATGGTAATAGTATC+AGG 0.407886 1_1:+63134296 Msa0035080:CDS
ACGTTCATTAATAAATGCTT+GGG 0.412592 1_1:-63135514 None:intergenic
ACAATGAATAATGTTAAGAT+TGG 0.412780 1_1:-63136803 None:intergenic
GATGAGAAATTTGGGACTTA+GGG 0.415472 1_1:-63133914 None:intergenic
ACCGCTTTCTACCAAGGTCC+TGG 0.419842 1_1:+63133981 Msa0035080:CDS
AATGATAGGCTGTCCATAGC+TGG 0.420213 1_1:-63135922 None:intergenic
CATTTATGTTATCACATGGT+TGG 0.423769 1_1:+63136593 Msa0035080:CDS
GTGGTTCGGGGCCTAAGAAT+GGG 0.426791 1_1:+63134726 Msa0035080:CDS
TATTAATGAACGTAAGCAAT+TGG 0.427450 1_1:+63135524 Msa0035080:CDS
CTTCATCTGTAGGGTGGAAT+CGG 0.427924 1_1:-63134007 None:intergenic
ACGAATCGTGCTACCGATAG+AGG 0.429431 1_1:+63134319 Msa0035080:CDS
GGCGCTGCTAGATCCTCCTT+TGG 0.437971 1_1:-63136114 None:intergenic
TAATACCTGCACTCCAGCTT+TGG 0.440305 1_1:-63134497 None:intergenic
CGCGAACCTGATCGAGGTCA+TGG 0.440556 1_1:-63134994 None:intergenic
TCCCTTTGTTGAGGAGGAAT+GGG 0.443540 1_1:+63134763 Msa0035080:CDS
AGTGGTTCGGGGCCTAAGAA+TGG 0.444141 1_1:+63134725 Msa0035080:CDS
ACTGCGTTGGACAAGAAGTA+TGG 0.444700 1_1:+63134283 Msa0035080:CDS
GTGCTACCGATAGAGGTTAC+TGG 0.447263 1_1:+63134326 Msa0035080:CDS
TGATGTACTGGTGGATCCCT+TGG 0.449135 1_1:+63134904 Msa0035080:CDS
CCTAAGAATGGGGAGAAGTA+CGG 0.449248 1_1:+63134737 Msa0035080:CDS
AAGTCCTCGTAAGTAGAATC+AGG 0.450580 1_1:-63134962 None:intergenic
TGATTTGACTGATGAGTACT+TGG 0.451759 1_1:+63135734 Msa0035080:CDS
TTCTGTACCTGATGATGTAC+TGG 0.454452 1_1:+63134892 Msa0035080:CDS
CCTGCTAAGGAGTTGGCTTG+TGG 0.455079 1_1:+63136361 Msa0035080:CDS
CTTTCACTCCTTGCATTCAA+AGG 0.455582 1_1:-63135891 None:intergenic
CGTTTCCAAATATATATGCT+TGG 0.455889 1_1:+63135863 Msa0035080:CDS
CACATGGTGATCGAAGCAAT+TGG 0.460401 1_1:+63134437 Msa0035080:CDS
CACTTGTTTATCACTTGGGT+CGG 0.461744 1_1:+63134410 Msa0035080:CDS
ATGGTACTTCTTCACTGCGT+TGG 0.462664 1_1:+63134270 Msa0035080:CDS
CGAACAATTTCTTCATCTGT+AGG 0.463070 1_1:-63134017 None:intergenic
TGACTTTGTAGATTTCTTTG+CGG 0.463820 1_1:+63136767 Msa0035080:three_prime_UTR
GCAGCGCCAAATTGGGTCTC+AGG 0.465580 1_1:+63136129 Msa0035080:CDS
CTATTCATTATATACTATGT+TGG 0.465870 1_1:+63136954 Msa0035080:three_prime_UTR
GGATCTAGCAGCGCCAAATT+GGG 0.473993 1_1:+63136122 Msa0035080:CDS
TGCATCAGAGTTTCCTGCTA+AGG 0.474003 1_1:+63136348 Msa0035080:CDS
GTAAACCCTTCTAGTTTCAA+AGG 0.474396 1_1:-63134833 None:intergenic
TATGTTGGCCAACAACCTAT+TGG 0.476399 1_1:-63136308 None:intergenic
GATGCAAAATTGAAATTCAA+AGG 0.480037 1_1:-63135669 None:intergenic
GATCTTCGAGAAGAGTGGTT+CGG 0.480423 1_1:+63134712 Msa0035080:CDS
ACACTCTCCATAACAGAAGT+TGG 0.481256 1_1:-63135472 None:intergenic
ACCATAACCTGCTCAATGAT+AGG 0.481307 1_1:-63135936 None:intergenic
GATGCAAATGCAGGTGGAGC+AGG 0.481874 1_1:-63136331 None:intergenic
TTAGAGGCAATGCGATGGAT+TGG 0.483997 1_1:+63136458 Msa0035080:CDS
TGAAACCCATGACCTCGATC+AGG 0.485558 1_1:+63134988 Msa0035080:CDS
TGGATTCTCCTTTGAATGCA+AGG 0.486310 1_1:+63135883 Msa0035080:CDS
AGGCTGTCCATAGCTGGGAA+TGG 0.491587 1_1:-63135916 None:intergenic
TCCCATTCCTCCTCAACAAA+GGG 0.491594 1_1:-63134764 None:intergenic
GAATTGGATGACTCAGCTGC+AGG 0.500175 1_1:-63136391 None:intergenic
CCACAAGCCAACTCCTTAGC+AGG 0.500568 1_1:-63136361 None:intergenic
ACATGGTGATCGAAGCAATT+GGG 0.507365 1_1:+63134438 Msa0035080:CDS
GATGAGACTTTAGCCAAAGC+TGG 0.508004 1_1:+63134484 Msa0035080:CDS
TTCACGAGTTCATCAACATC+AGG 0.509294 1_1:-63134857 None:intergenic
TTCATTATCAACAGGCGGCA+AGG 0.512774 1_1:-63134810 None:intergenic
AGAGTTTCCTGCTAAGGAGT+TGG 0.513288 1_1:+63136354 Msa0035080:CDS
GAAGACACTTGTTTATCACT+TGG 0.516829 1_1:+63134405 Msa0035080:CDS
ATTGGGTCATGCATGAGTAT+AGG 0.516923 1_1:+63134455 Msa0035080:CDS
ATGCTTGGGAATACTGAGGA+TGG 0.519813 1_1:-63135500 None:intergenic
AAGCAATTGGAAGCCACTCT+TGG 0.521943 1_1:+63135537 Msa0035080:CDS
AATTCAGCTCATATAACTGC+AGG 0.522347 1_1:+63136409 Msa0035080:CDS
TTTAGCCAAAGCTGGAGTGC+AGG 0.526882 1_1:+63134492 Msa0035080:CDS
GATTGGATGGTGGACAAGAA+TGG 0.532762 1_1:+63136475 Msa0035080:CDS
ATCGGAAGCTTCATGTATAC+GGG 0.534310 1_1:+63136664 Msa0035080:CDS
GGATCCACCAGTACATCATC+AGG 0.534443 1_1:-63134899 None:intergenic
TTAACACCGTTATGTCTACT+GGG 0.535683 1_1:+63136503 Msa0035080:CDS
AAATGCTTGATTACTATGCC+TGG 0.538273 1_1:-63136994 None:intergenic
GTTTGTCAAGGAACTACCAT+AGG 0.538784 1_1:-63136052 None:intergenic
GAACAATTTCTTCATCTGTA+GGG 0.541473 1_1:-63134016 None:intergenic
GAAAGCCCCATTCCCAGCTA+TGG 0.541885 1_1:+63135909 Msa0035080:CDS
AAGACACTTGTTTATCACTT+GGG 0.542978 1_1:+63134406 Msa0035080:CDS
ACTTGTTTATCACTTGGGTC+GGG 0.543479 1_1:+63134411 Msa0035080:CDS
TCATTATCAACAGGCGGCAA+GGG 0.543494 1_1:-63134809 None:intergenic
CTCCCATTCCTCCTCAACAA+AGG 0.545530 1_1:-63134765 None:intergenic
CACTTGGGTCGGGCTCCACA+TGG 0.545932 1_1:+63134421 Msa0035080:CDS
CCGCTTTCTACCAAGGTCCT+GGG 0.551610 1_1:+63133982 Msa0035080:CDS
GTGAGAAGATTCTAGGACCT+CGG 0.552018 1_1:-63133832 None:intergenic
GACATACTGGGAAGGTCCCA+TGG 0.553857 1_1:-63134122 None:intergenic
ATGAACCTTTGAAACTAGAA+GGG 0.554073 1_1:+63134828 Msa0035080:CDS
CGATCTTGAAACTCAGTGAA+AGG 0.554572 1_1:-63136645 None:intergenic
CTTTCACTGAGTTTCAAGAT+CGG 0.555244 1_1:+63136646 Msa0035080:CDS
CGGGGCTCCCTTTGTTGAGG+AGG 0.555447 1_1:+63134757 Msa0035080:CDS
GAGAACGATGCTTAACTGAC+TGG 0.557153 1_1:-63136724 None:intergenic
GAAGCATGCCAATAGGTTGT+TGG 0.558530 1_1:+63136300 Msa0035080:CDS
TGGACAGCCTATCATTGAGC+AGG 0.558645 1_1:+63135929 Msa0035080:CDS
CAAAGAAATCTACAAAGTCA+TGG 0.558789 1_1:-63136764 None:intergenic
TCATGAAGATTTACCAAAGG+AGG 0.560098 1_1:+63136101 Msa0035080:CDS
AGAGGTTACTGGAAGACTAC+TGG 0.560217 1_1:+63134337 Msa0035080:CDS
AATATCAATTCAGTGCAAGA+TGG 0.561413 1_1:+63135615 Msa0035080:CDS
AAGGATCGTGCTATCAAGAA+TGG 0.564256 1_1:+63134361 Msa0035080:CDS
AGTCTTCCAGTAACCTCTAT+CGG 0.564257 1_1:-63134332 None:intergenic
TCAAATCAGTAAGATAATCA+GGG 0.565317 1_1:-63135719 None:intergenic
AATATATCTGATCTATATGG+TGG 0.571230 1_1:+63135591 Msa0035080:CDS
AAGAATGGAGAGGAGACTGT+TGG 0.572368 1_1:+63134376 Msa0035080:CDS
TGTACCTGATGATGTACTGG+TGG 0.572636 1_1:+63134895 Msa0035080:CDS
TGCAGGTGGAGCAGGTATGT+TGG 0.572952 1_1:-63136323 None:intergenic
ACATCTACAAATTCGAGCCA+TGG 0.573608 1_1:+63134105 Msa0035080:CDS
CGTCGTCGTCAGGGCATGCA+AGG 0.575963 1_1:-63135836 None:intergenic
GGAAACTCTGATGCAAATGC+AGG 0.577041 1_1:-63136340 None:intergenic
TCTAGCATTGCAGCAACAGA+AGG 0.578501 1_1:-63135807 None:intergenic
AATGTGGAGGGCGAAACCTA+TGG 0.578503 1_1:+63136036 Msa0035080:CDS
TGGATGGTGGACAAGAATGG+AGG 0.578543 1_1:+63136478 Msa0035080:CDS
ATGATAGGCTGTCCATAGCT+GGG 0.578547 1_1:-63135921 None:intergenic
ATCTACTTGTTTCGTCCTCG+AGG 0.580131 1_1:+63137027 Msa0035080:three_prime_UTR
GAGATATAATTTGATTCACC+AGG 0.580669 1_1:+63136976 Msa0035080:three_prime_UTR
CAATTTCTTCATCTGTAGGG+TGG 0.582331 1_1:-63134013 None:intergenic
GTACGGGGCTCCCTTTGTTG+AGG 0.584130 1_1:+63134754 Msa0035080:CDS
ATATATCTGATCTATATGGT+GGG 0.590562 1_1:+63135592 Msa0035080:CDS
AGATGTCGAAGCTGAAGACA+AGG 0.592347 1_1:+63134239 Msa0035080:CDS
GGAATCGGAACCCAGGACCT+TGG 0.593127 1_1:-63133992 None:intergenic
GCGAACCTGATCGAGGTCAT+GGG 0.593464 1_1:-63134993 None:intergenic
AGGATGCTTATGTCCTGTGT+AGG 0.594455 1_1:+63134690 Msa0035080:CDS
CATCTACAAATTCGAGCCAT+GGG 0.597761 1_1:+63134106 Msa0035080:CDS
ATTGATACCAGTAACACAGT+TGG 0.598796 1_1:+63135432 Msa0035080:CDS
TGGTTCGGGGCCTAAGAATG+GGG 0.603951 1_1:+63134727 Msa0035080:CDS
AACTCTGATGCAAATGCAGG+TGG 0.607180 1_1:-63136337 None:intergenic
ATCGTTCTCATTGAATGACT+AGG 0.608878 1_1:+63136738 Msa0035080:three_prime_UTR
TGAAGACAAGGGATTTGGAA+TGG 0.611227 1_1:+63134251 Msa0035080:CDS
TGCTTGGGAATACTGAGGAT+GGG 0.611896 1_1:-63135499 None:intergenic
CTAGGACCTCGGAAGTGTCG+TGG 0.612035 1_1:-63133821 None:intergenic
AATTGGATGACTCAGCTGCA+GGG 0.612514 1_1:-63136390 None:intergenic
GAAGGAACCGCTTTCTACCA+AGG 0.613452 1_1:+63133975 Msa0035080:CDS
TGTAGGATCTTCGAGAAGAG+TGG 0.616842 1_1:+63134707 Msa0035080:CDS
AGGCAATGCGATGGATTGGA+TGG 0.617737 1_1:+63136462 Msa0035080:CDS
ACAGAAGGATCAATCTCAGT+GGG 0.618605 1_1:-63135792 None:intergenic
GTGCAAGATGGATACAATGG+TGG 0.619749 1_1:+63135627 Msa0035080:CDS
ATCAGGTACAGAAACTGCCA+AGG 0.622479 1_1:-63134882 None:intergenic
CCCAGGACCTTGGTAGAAAG+CGG 0.622774 1_1:-63133982 None:intergenic
GCTGTCCATAGCTGGGAATG+GGG 0.625492 1_1:-63135914 None:intergenic
TGCAAGATGGATACAATGGT+GGG 0.628172 1_1:+63135628 Msa0035080:CDS
TGATGAACTCGTGAATCCCT+TGG 0.630807 1_1:+63134865 Msa0035080:CDS
TTGTCATGAAGATTTACCAA+AGG 0.633220 1_1:+63136098 Msa0035080:CDS
AGCGAGATAATCGAAGCAAG+AGG 0.634728 1_1:-63134075 None:intergenic
GCGAGATAATCGAAGCAAGA+GGG 0.635232 1_1:-63134074 None:intergenic
GGAAAACCCAGTAGACATAA+CGG 0.635521 1_1:-63136509 None:intergenic
CAAATCAGTAAGATAATCAG+GGG 0.637474 1_1:-63135718 None:intergenic
GTCAGAACTTAAAACTATCG+AGG 0.640688 1_1:-63136924 None:intergenic
GTAGGGTGGAATCGGAACCC+AGG 0.641481 1_1:-63133999 None:intergenic
TCAGTGCAAGATGGATACAA+TGG 0.642636 1_1:+63135624 Msa0035080:CDS
AAAGGTTCATTATCAACAGG+CGG 0.643229 1_1:-63134815 None:intergenic
ACTGCATTTATGTTATCACA+TGG 0.644214 1_1:+63136589 Msa0035080:CDS
GGGTCATTGACAGAATGTGG+AGG 0.644623 1_1:+63136023 Msa0035080:intron
GGTCATTGACAGAATGTGGA+GGG 0.649146 1_1:+63136024 Msa0035080:intron
TCTTGGTATGTATGAACATG+AGG 0.652722 1_1:+63135554 Msa0035080:CDS
ATGTTCATACATACCAAGAG+TGG 0.653226 1_1:-63135550 None:intergenic
AAGAAGATGACATACTGGGA+AGG 0.657085 1_1:-63134130 None:intergenic
TAAGAATGGGGAGAAGTACG+GGG 0.658394 1_1:+63134739 Msa0035080:CDS
TTACTGGAAGACTACTGGCA+AGG 0.661834 1_1:+63134342 Msa0035080:CDS
GATGTCGAAGCTGAAGACAA+GGG 0.663983 1_1:+63134240 Msa0035080:CDS
CAATGCGATGGATTGGATGG+TGG 0.669977 1_1:+63136465 Msa0035080:CDS
ATAAATGCTTGGGAATACTG+AGG 0.674761 1_1:-63135504 None:intergenic
TCGTGCTATCAAGAATGGAG+AGG 0.674964 1_1:+63134366 Msa0035080:CDS
AACAGAAGGATCAATCTCAG+TGG 0.687881 1_1:-63135793 None:intergenic
ATGCAACGCGAACCTGATCG+AGG 0.688963 1_1:-63135000 None:intergenic
TCTTCTCGAAGATCCTACAC+AGG 0.693249 1_1:-63134703 None:intergenic
TCAGGTACAGAAACTGCCAA+GGG 0.701648 1_1:-63134881 None:intergenic
CAATTGCTTCGATCACCATG+TGG 0.709636 1_1:-63134436 None:intergenic
TGTGCCTGATTCTACTTACG+AGG 0.713357 1_1:+63134958 Msa0035080:CDS
TCTTCGAGAAGAGTGGTTCG+GGG 0.722974 1_1:+63134714 Msa0035080:CDS
AAATCAGTAAGATAATCAGG+GGG 0.738324 1_1:-63135717 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATTTTTTTATTTTTT+TGG + chr1_1:63136842-63136861 Msa0035080:three_prime_UTR 0.0%
!! AAATTAGAATTAAATATGAT+GGG - chr1_1:63135387-63135406 None:intergenic 10.0%
!! AAAATTAGAATTAAATATGA+TGG - chr1_1:63135388-63135407 None:intergenic 10.0%
!! AAATAAAAAAATAAAAATGC+AGG - chr1_1:63136839-63136858 None:intergenic 10.0%
!!! TTTTTGTAATTTATTGAACT+GGG + chr1_1:63134577-63134596 Msa0035080:intron 15.0%
!!! TTTTGTGTAATTTATGAAAT+TGG + chr1_1:63134600-63134619 Msa0035080:intron 15.0%
!! TTTGTGTAATTTATGAAATT+GGG + chr1_1:63134601-63134620 Msa0035080:intron 15.0%
!!! GATTTATTTATTTTTTATCG+TGG + chr1_1:63135192-63135211 Msa0035080:intron 15.0%
!! TATAGATCAGATATATTATT+AGG - chr1_1:63135588-63135607 None:intergenic 15.0%
!! AATAATATATCTGATCTATA+TGG + chr1_1:63135588-63135607 Msa0035080:CDS 15.0%
!! TGATAAAAACAAAAATTAGA+AGG - chr1_1:63136252-63136271 None:intergenic 15.0%
!!! AATTTTTGTTTTTATCACTT+CGG + chr1_1:63136255-63136274 Msa0035080:intron 15.0%
!! ATTAGATAAGAAACATGTTT+GGG - chr1_1:63133879-63133898 None:intergenic 20.0%
!! AATTAGATAAGAAACATGTT+TGG - chr1_1:63133880-63133899 None:intergenic 20.0%
!! TTGAAATTGATGAGAAATTT+GGG - chr1_1:63133925-63133944 None:intergenic 20.0%
!!! TTTGAAATTGATGAGAAATT+TGG - chr1_1:63133926-63133945 None:intergenic 20.0%
!!! GTTTTTGTAATTTATTGAAC+TGG + chr1_1:63134576-63134595 Msa0035080:intron 20.0%
!!! TTTTTTAATCAAACTTTTGC+TGG + chr1_1:63135163-63135182 Msa0035080:intron 20.0%
!!! TTTTTAATCAAACTTTTGCT+GGG + chr1_1:63135164-63135183 Msa0035080:intron 20.0%
!! AAGTAGATAATATAACAAGT+AGG - chr1_1:63135353-63135372 None:intergenic 20.0%
!! TAGAAATATCTTCAATTACT+AGG + chr1_1:63135407-63135426 Msa0035080:intron 20.0%
!! ACAATGAATAATGTTAAGAT+TGG - chr1_1:63136806-63136825 None:intergenic 20.0%
!! CTATTCATTATATACTATGT+TGG + chr1_1:63136954-63136973 Msa0035080:three_prime_UTR 20.0%
! TAAAATTGTGAGAAGATTCT+AGG - chr1_1:63133842-63133861 None:intergenic 25.0%
! TAAACAATCCAACATCATTA+AGG - chr1_1:63135026-63135045 None:intergenic 25.0%
!! TTTTAATCAAACTTTTGCTG+GGG + chr1_1:63135165-63135184 Msa0035080:intron 25.0%
! ACGTTCATTAATAAATGCTT+GGG - chr1_1:63135517-63135536 None:intergenic 25.0%
! TACGTTCATTAATAAATGCT+TGG - chr1_1:63135518-63135537 None:intergenic 25.0%
! TATTAATGAACGTAAGCAAT+TGG + chr1_1:63135524-63135543 Msa0035080:CDS 25.0%
! AATATATCTGATCTATATGG+TGG + chr1_1:63135591-63135610 Msa0035080:CDS 25.0%
! ATATATCTGATCTATATGGT+GGG + chr1_1:63135592-63135611 Msa0035080:CDS 25.0%
!! AATTCAAAGGATTTTCGTTA+TGG - chr1_1:63135659-63135678 None:intergenic 25.0%
! GATGCAAAATTGAAATTCAA+AGG - chr1_1:63135672-63135691 None:intergenic 25.0%
! TCAAATCAGTAAGATAATCA+GGG - chr1_1:63135722-63135741 None:intergenic 25.0%
! ATCACGATTCTTAATATCAT+TGG - chr1_1:63135763-63135782 None:intergenic 25.0%
! AGAATCCAAGCATATATATT+TGG - chr1_1:63135871-63135890 None:intergenic 25.0%
! AAAAACATGTTTGTTTGTCA+AGG - chr1_1:63136067-63136086 None:intergenic 25.0%
!!! ATTACAGACATTACTTTTAG+AGG + chr1_1:63136442-63136461 Msa0035080:CDS 25.0%
! ATTTATGTTATCACATGGTT+GGG + chr1_1:63136594-63136613 Msa0035080:CDS 25.0%
! TCTGTTTTCTGTCAAATCAA+TGG + chr1_1:63133953-63133972 Msa0035080:CDS 30.0%
! TTTTCTGTCAAATCAATGGA+AGG + chr1_1:63133957-63133976 Msa0035080:CDS 30.0%
GAACAATTTCTTCATCTGTA+GGG - chr1_1:63134019-63134038 None:intergenic 30.0%
TACCTTAAGAAAAAACTCAC+CGG + chr1_1:63134044-63134063 Msa0035080:CDS 30.0%
! AGAAGTATGGTAATAGTATC+AGG + chr1_1:63134296-63134315 Msa0035080:CDS 30.0%
AAGACACTTGTTTATCACTT+GGG + chr1_1:63134406-63134425 Msa0035080:CDS 30.0%
! GATGAGATTTGTGTTTGTTT+TGG + chr1_1:63134661-63134680 Msa0035080:intron 30.0%
TTCAAAGGTTCATTATCAAC+AGG - chr1_1:63134821-63134840 None:intergenic 30.0%
!! AATGAACCTTTGAAACTAGA+AGG + chr1_1:63134827-63134846 Msa0035080:CDS 30.0%
!! ATGAACCTTTGAAACTAGAA+GGG + chr1_1:63134828-63134847 Msa0035080:CDS 30.0%
! TATTTTGTAAACTTTGCCTG+TGG + chr1_1:63135074-63135093 Msa0035080:intron 30.0%
! ATTTTGTAAACTTTGCCTGT+GGG + chr1_1:63135075-63135094 Msa0035080:intron 30.0%
AATCAAGCAAAGCAACAAAA+TGG - chr1_1:63135145-63135164 None:intergenic 30.0%
TGTCTATCATTCAACAGAAA+AGG - chr1_1:63135264-63135283 None:intergenic 30.0%
AATATCAATTCAGTGCAAGA+TGG + chr1_1:63135615-63135634 Msa0035080:CDS 30.0%
! GAATTTCAATTTTGCATCTG+AGG + chr1_1:63135674-63135693 Msa0035080:CDS 30.0%
AAATCAGTAAGATAATCAGG+GGG - chr1_1:63135720-63135739 None:intergenic 30.0%
CAAATCAGTAAGATAATCAG+GGG - chr1_1:63135721-63135740 None:intergenic 30.0%
GTCAAATCAGTAAGATAATC+AGG - chr1_1:63135723-63135742 None:intergenic 30.0%
CGTTTCCAAATATATATGCT+TGG + chr1_1:63135863-63135882 Msa0035080:CDS 30.0%
! ATAGCCGTCTTAAAATCTTT+TGG + chr1_1:63136001-63136020 Msa0035080:intron 30.0%
! TAGCCGTCTTAAAATCTTTT+GGG + chr1_1:63136002-63136021 Msa0035080:intron 30.0%
TTGTCATGAAGATTTACCAA+AGG + chr1_1:63136098-63136117 Msa0035080:CDS 30.0%
AATAACAGCTTGAGAAATCA+GGG - chr1_1:63136177-63136196 None:intergenic 30.0%
AAATAACAGCTTGAGAAATC+AGG - chr1_1:63136178-63136197 None:intergenic 30.0%
!! TTTTTGTGTGTGTGTTATTG+TGG + chr1_1:63136195-63136214 Msa0035080:intron 30.0%
ACTGCATTTATGTTATCACA+TGG + chr1_1:63136589-63136608 Msa0035080:CDS 30.0%
CATTTATGTTATCACATGGT+TGG + chr1_1:63136593-63136612 Msa0035080:CDS 30.0%
GTAAATGACAAATGCAAGTT+TGG + chr1_1:63136686-63136705 Msa0035080:exon 30.0%
CAAAGAAATCTACAAAGTCA+TGG - chr1_1:63136767-63136786 None:intergenic 30.0%
TGACTTTGTAGATTTCTTTG+CGG + chr1_1:63136767-63136786 Msa0035080:three_prime_UTR 30.0%
!!! AGTTTTAAGTTCTGACTGAT+TGG + chr1_1:63136931-63136950 Msa0035080:three_prime_UTR 30.0%
GAGATATAATTTGATTCACC+AGG + chr1_1:63136976-63136995 Msa0035080:three_prime_UTR 30.0%
! GATGAGAAATTTGGGACTTA+GGG - chr1_1:63133917-63133936 None:intergenic 35.0%
! TGATGAGAAATTTGGGACTT+AGG - chr1_1:63133918-63133937 None:intergenic 35.0%
CGAACAATTTCTTCATCTGT+AGG - chr1_1:63134020-63134039 None:intergenic 35.0%
!!! TTCCGGTGAGTTTTTTCTTA+AGG - chr1_1:63134049-63134068 None:intergenic 35.0%
AGAGAAGAAGATGACATACT+GGG - chr1_1:63134137-63134156 None:intergenic 35.0%
TAGAGAAGAAGATGACATAC+TGG - chr1_1:63134138-63134157 None:intergenic 35.0%
GTATGTCATCTTCTTCTCTA+TGG + chr1_1:63134138-63134157 Msa0035080:intron 35.0%
TCTTCTTCTCTATGGTTTCA+TGG + chr1_1:63134146-63134165 Msa0035080:intron 35.0%
GAAGACACTTGTTTATCACT+TGG + chr1_1:63134405-63134424 Msa0035080:CDS 35.0%
!!! GAGATTTGTGTTTGTTTTGG+TGG + chr1_1:63134664-63134683 Msa0035080:CDS 35.0%
AAAGGTTCATTATCAACAGG+CGG - chr1_1:63134818-63134837 None:intergenic 35.0%
!! GTAAACCCTTCTAGTTTCAA+AGG - chr1_1:63134836-63134855 None:intergenic 35.0%
!! TCGTCATAAAAAGCATCCAA+GGG - chr1_1:63134923-63134942 None:intergenic 35.0%
!! ATGCTTTTTATGACGAGCTT+TGG + chr1_1:63134927-63134946 Msa0035080:CDS 35.0%
TTCATTCATGTTTGTGCTGT+TGG + chr1_1:63135049-63135068 Msa0035080:intron 35.0%
AATCTGTGCCAAAACATATC+TGG - chr1_1:63135226-63135245 None:intergenic 35.0%
ATTGATACCAGTAACACAGT+TGG + chr1_1:63135432-63135451 Msa0035080:CDS 35.0%
CTTCAATCCAACTTCTGTTA+TGG + chr1_1:63135465-63135484 Msa0035080:CDS 35.0%
ATAAATGCTTGGGAATACTG+AGG - chr1_1:63135507-63135526 None:intergenic 35.0%
ATGTTCATACATACCAAGAG+TGG - chr1_1:63135553-63135572 None:intergenic 35.0%
TCTTGGTATGTATGAACATG+AGG + chr1_1:63135554-63135573 Msa0035080:CDS 35.0%
TGATTTGACTGATGAGTACT+TGG + chr1_1:63135734-63135753 Msa0035080:CDS 35.0%
! AGCCGTCTTAAAATCTTTTG+GGG + chr1_1:63136003-63136022 Msa0035080:intron 35.0%
!! GACCCCAAAAGATTTTAAGA+CGG - chr1_1:63136008-63136027 None:intergenic 35.0%
TCATGAAGATTTACCAAAGG+AGG + chr1_1:63136101-63136120 Msa0035080:CDS 35.0%
! AATCAGGGTTTAAAGTGAGT+GGG - chr1_1:63136162-63136181 None:intergenic 35.0%
! AAATCAGGGTTTAAAGTGAG+TGG - chr1_1:63136163-63136182 None:intergenic 35.0%
!!! TTTGTTTTTATCACTTCGGC+AGG + chr1_1:63136259-63136278 Msa0035080:intron 35.0%
TGCAGTTATATGAGCTGAAT+TGG - chr1_1:63136410-63136429 None:intergenic 35.0%
AATTCAGCTCATATAACTGC+AGG + chr1_1:63136409-63136428 Msa0035080:CDS 35.0%
TTTAACACCGTTATGTCTAC+TGG + chr1_1:63136502-63136521 Msa0035080:CDS 35.0%
TTAACACCGTTATGTCTACT+GGG + chr1_1:63136503-63136522 Msa0035080:CDS 35.0%
AGCAGAGTTAACATCAGTTT+GGG - chr1_1:63136533-63136552 None:intergenic 35.0%
TAGCAGAGTTAACATCAGTT+TGG - chr1_1:63136534-63136553 None:intergenic 35.0%
! TGATGTTAACTCTGCTACTT+TGG + chr1_1:63136537-63136556 Msa0035080:CDS 35.0%
CTTTCACTGAGTTTCAAGAT+CGG + chr1_1:63136646-63136665 Msa0035080:CDS 35.0%
ATCGTTCTCATTGAATGACT+AGG + chr1_1:63136738-63136757 Msa0035080:three_prime_UTR 35.0%
GTCAGAACTTAAAACTATCG+AGG - chr1_1:63136927-63136946 None:intergenic 35.0%
AAATGCTTGATTACTATGCC+TGG - chr1_1:63136997-63137016 None:intergenic 35.0%
CAATTTCTTCATCTGTAGGG+TGG - chr1_1:63134016-63134035 None:intergenic 40.0%
GAAGCAAGAGGGTAAATTTC+CGG - chr1_1:63134066-63134085 None:intergenic 40.0%
ACATCTACAAATTCGAGCCA+TGG + chr1_1:63134105-63134124 Msa0035080:CDS 40.0%
CATCTACAAATTCGAGCCAT+GGG + chr1_1:63134106-63134125 Msa0035080:CDS 40.0%
AAGAAGATGACATACTGGGA+AGG - chr1_1:63134133-63134152 None:intergenic 40.0%
TGAAGACAAGGGATTTGGAA+TGG + chr1_1:63134251-63134270 Msa0035080:CDS 40.0%
AGTCTTCCAGTAACCTCTAT+CGG - chr1_1:63134335-63134354 None:intergenic 40.0%
AAGGATCGTGCTATCAAGAA+TGG + chr1_1:63134361-63134380 Msa0035080:CDS 40.0%
CACTTGTTTATCACTTGGGT+CGG + chr1_1:63134410-63134429 Msa0035080:CDS 40.0%
ACTTGTTTATCACTTGGGTC+GGG + chr1_1:63134411-63134430 Msa0035080:CDS 40.0%
ACATGGTGATCGAAGCAATT+GGG + chr1_1:63134438-63134457 Msa0035080:CDS 40.0%
ATTGGGTCATGCATGAGTAT+AGG + chr1_1:63134455-63134474 Msa0035080:CDS 40.0%
!!! TGTGTTTGTTTTGGTGGAGA+AGG + chr1_1:63134670-63134689 Msa0035080:CDS 40.0%
TTCACGAGTTCATCAACATC+AGG - chr1_1:63134860-63134879 None:intergenic 40.0%
! TTCTGTACCTGATGATGTAC+TGG + chr1_1:63134892-63134911 Msa0035080:CDS 40.0%
!! CTCGTCATAAAAAGCATCCA+AGG - chr1_1:63134924-63134943 None:intergenic 40.0%
AAGTCCTCGTAAGTAGAATC+AGG - chr1_1:63134965-63134984 None:intergenic 40.0%
CGTTGCATCCTTAATGATGT+TGG + chr1_1:63135015-63135034 Msa0035080:intron 40.0%
AAGCATTCAATCTATCCCAC+AGG - chr1_1:63135093-63135112 None:intergenic 40.0%
! TAATCAAACTTTTGCTGGGG+TGG + chr1_1:63135168-63135187 Msa0035080:intron 40.0%
! CCAAAACATATCTGGAACGA+TGG - chr1_1:63135218-63135237 None:intergenic 40.0%
! CCATCGTTCCAGATATGTTT+TGG + chr1_1:63135215-63135234 Msa0035080:intron 40.0%
ACACTCTCCATAACAGAAGT+TGG - chr1_1:63135475-63135494 None:intergenic 40.0%
TCAGTGCAAGATGGATACAA+TGG + chr1_1:63135624-63135643 Msa0035080:CDS 40.0%
TGCAAGATGGATACAATGGT+GGG + chr1_1:63135628-63135647 Msa0035080:CDS 40.0%
! CAATTTTGCATCTGAGGAAC+TGG + chr1_1:63135680-63135699 Msa0035080:CDS 40.0%
ACAGAAGGATCAATCTCAGT+GGG - chr1_1:63135795-63135814 None:intergenic 40.0%
AACAGAAGGATCAATCTCAG+TGG - chr1_1:63135796-63135815 None:intergenic 40.0%
TGGATTCTCCTTTGAATGCA+AGG + chr1_1:63135883-63135902 Msa0035080:CDS 40.0%
CTTTCACTCCTTGCATTCAA+AGG - chr1_1:63135894-63135913 None:intergenic 40.0%
ACCATAACCTGCTCAATGAT+AGG - chr1_1:63135939-63135958 None:intergenic 40.0%
GTTTGTCAAGGAACTACCAT+AGG - chr1_1:63136055-63136074 None:intergenic 40.0%
! CTTTTGTGAAGCATGCCAAT+AGG + chr1_1:63136293-63136312 Msa0035080:CDS 40.0%
TATGTTGGCCAACAACCTAT+TGG - chr1_1:63136311-63136330 None:intergenic 40.0%
!! TACTTTTAGAGGCAATGCGA+TGG + chr1_1:63136453-63136472 Msa0035080:CDS 40.0%
GGAAAACCCAGTAGACATAA+CGG - chr1_1:63136512-63136531 None:intergenic 40.0%
! ACATGGTTGGGTTTTCTTGA+TGG + chr1_1:63136606-63136625 Msa0035080:CDS 40.0%
! CATGGTTGGGTTTTCTTGAT+GGG + chr1_1:63136607-63136626 Msa0035080:CDS 40.0%
CGATCTTGAAACTCAGTGAA+AGG - chr1_1:63136648-63136667 None:intergenic 40.0%
GATCGGAAGCTTCATGTATA+CGG + chr1_1:63136663-63136682 Msa0035080:CDS 40.0%
ATCGGAAGCTTCATGTATAC+GGG + chr1_1:63136664-63136683 Msa0035080:CDS 40.0%
!! GTGAGAAGATTCTAGGACCT+CGG - chr1_1:63133835-63133854 None:intergenic 45.0%
CTTCATCTGTAGGGTGGAAT+CGG - chr1_1:63134010-63134029 None:intergenic 45.0%
GCGAGATAATCGAAGCAAGA+GGG - chr1_1:63134077-63134096 None:intergenic 45.0%
AGCGAGATAATCGAAGCAAG+AGG - chr1_1:63134078-63134097 None:intergenic 45.0%
AGATGTCGAAGCTGAAGACA+AGG + chr1_1:63134239-63134258 Msa0035080:CDS 45.0%
GATGTCGAAGCTGAAGACAA+GGG + chr1_1:63134240-63134259 Msa0035080:CDS 45.0%
GAAGCTGAAGACAAGGGATT+TGG + chr1_1:63134246-63134265 Msa0035080:CDS 45.0%
ATGGTACTTCTTCACTGCGT+TGG + chr1_1:63134270-63134289 Msa0035080:CDS 45.0%
ACTGCGTTGGACAAGAAGTA+TGG + chr1_1:63134283-63134302 Msa0035080:CDS 45.0%
AGAGGTTACTGGAAGACTAC+TGG + chr1_1:63134337-63134356 Msa0035080:CDS 45.0%
TTACTGGAAGACTACTGGCA+AGG + chr1_1:63134342-63134361 Msa0035080:CDS 45.0%
TCGTGCTATCAAGAATGGAG+AGG + chr1_1:63134366-63134385 Msa0035080:CDS 45.0%
AAGAATGGAGAGGAGACTGT+TGG + chr1_1:63134376-63134395 Msa0035080:CDS 45.0%
CAATTGCTTCGATCACCATG+TGG - chr1_1:63134439-63134458 None:intergenic 45.0%
CACATGGTGATCGAAGCAAT+TGG + chr1_1:63134437-63134456 Msa0035080:CDS 45.0%
GATGAGACTTTAGCCAAAGC+TGG + chr1_1:63134484-63134503 Msa0035080:CDS 45.0%
TAATACCTGCACTCCAGCTT+TGG - chr1_1:63134500-63134519 None:intergenic 45.0%
AGGATGCTTATGTCCTGTGT+AGG + chr1_1:63134690-63134709 Msa0035080:CDS 45.0%
TCTTCTCGAAGATCCTACAC+AGG - chr1_1:63134706-63134725 None:intergenic 45.0%
TGTAGGATCTTCGAGAAGAG+TGG + chr1_1:63134707-63134726 Msa0035080:CDS 45.0%
GATCTTCGAGAAGAGTGGTT+CGG + chr1_1:63134712-63134731 Msa0035080:CDS 45.0%
ATCTTCGAGAAGAGTGGTTC+GGG + chr1_1:63134713-63134732 Msa0035080:CDS 45.0%
CCTAAGAATGGGGAGAAGTA+CGG + chr1_1:63134737-63134756 Msa0035080:CDS 45.0%
! CTAAGAATGGGGAGAAGTAC+GGG + chr1_1:63134738-63134757 Msa0035080:CDS 45.0%
! TAAGAATGGGGAGAAGTACG+GGG + chr1_1:63134739-63134758 Msa0035080:CDS 45.0%
TCCCTTTGTTGAGGAGGAAT+GGG + chr1_1:63134763-63134782 Msa0035080:CDS 45.0%
TCCCATTCCTCCTCAACAAA+GGG - chr1_1:63134767-63134786 None:intergenic 45.0%
! GAGGAGGAATGGGAGAATTT+TGG + chr1_1:63134773-63134792 Msa0035080:CDS 45.0%
TCATTATCAACAGGCGGCAA+GGG - chr1_1:63134812-63134831 None:intergenic 45.0%
TTCATTATCAACAGGCGGCA+AGG - chr1_1:63134813-63134832 None:intergenic 45.0%
TGATGAACTCGTGAATCCCT+TGG + chr1_1:63134865-63134884 Msa0035080:CDS 45.0%
TCAGGTACAGAAACTGCCAA+GGG - chr1_1:63134884-63134903 None:intergenic 45.0%
ATCAGGTACAGAAACTGCCA+AGG - chr1_1:63134885-63134904 None:intergenic 45.0%
! TGTACCTGATGATGTACTGG+TGG + chr1_1:63134895-63134914 Msa0035080:CDS 45.0%
TGTGCCTGATTCTACTTACG+AGG + chr1_1:63134958-63134977 Msa0035080:CDS 45.0%
AGCACTTCCAACTGTGTTAC+TGG - chr1_1:63135442-63135461 None:intergenic 45.0%
TGCTTGGGAATACTGAGGAT+GGG - chr1_1:63135502-63135521 None:intergenic 45.0%
ATGCTTGGGAATACTGAGGA+TGG - chr1_1:63135503-63135522 None:intergenic 45.0%
AAGCAATTGGAAGCCACTCT+TGG + chr1_1:63135537-63135556 Msa0035080:CDS 45.0%
GTGCAAGATGGATACAATGG+TGG + chr1_1:63135627-63135646 Msa0035080:CDS 45.0%
TCTAGCATTGCAGCAACAGA+AGG - chr1_1:63135810-63135829 None:intergenic 45.0%
ATGATAGGCTGTCCATAGCT+GGG - chr1_1:63135924-63135943 None:intergenic 45.0%
AATGATAGGCTGTCCATAGC+TGG - chr1_1:63135925-63135944 None:intergenic 45.0%
GCCTATCATTGAGCAGGTTA+TGG + chr1_1:63135935-63135954 Msa0035080:intron 45.0%
TTGGGGTCATTGACAGAATG+TGG + chr1_1:63136020-63136039 Msa0035080:intron 45.0%
GGTCATTGACAGAATGTGGA+GGG + chr1_1:63136024-63136043 Msa0035080:intron 45.0%
CTGTAACCTGAGACCCAATT+TGG - chr1_1:63136138-63136157 None:intergenic 45.0%
GAAGCATGCCAATAGGTTGT+TGG + chr1_1:63136300-63136319 Msa0035080:CDS 45.0%
AACTCTGATGCAAATGCAGG+TGG - chr1_1:63136340-63136359 None:intergenic 45.0%
GGAAACTCTGATGCAAATGC+AGG - chr1_1:63136343-63136362 None:intergenic 45.0%
TGCATCAGAGTTTCCTGCTA+AGG + chr1_1:63136348-63136367 Msa0035080:CDS 45.0%
AGAGTTTCCTGCTAAGGAGT+TGG + chr1_1:63136354-63136373 Msa0035080:CDS 45.0%
AATTGGATGACTCAGCTGCA+GGG - chr1_1:63136393-63136412 None:intergenic 45.0%
TTAGAGGCAATGCGATGGAT+TGG + chr1_1:63136458-63136477 Msa0035080:CDS 45.0%
!! GATTGGATGGTGGACAAGAA+TGG + chr1_1:63136475-63136494 Msa0035080:CDS 45.0%
!! GCTACTTTGGTGCCTATTTC+TGG + chr1_1:63136550-63136569 Msa0035080:CDS 45.0%
!! TTTGGTGCCTATTTCTGGCT+TGG + chr1_1:63136555-63136574 Msa0035080:CDS 45.0%
CTACAGACCAAGCCAGAAAT+AGG - chr1_1:63136565-63136584 None:intergenic 45.0%
GAGAACGATGCTTAACTGAC+TGG - chr1_1:63136727-63136746 None:intergenic 45.0%
GAAGGAACCGCTTTCTACCA+AGG + chr1_1:63133975-63133994 Msa0035080:CDS 50.0%
ACGAATCGTGCTACCGATAG+AGG + chr1_1:63134319-63134338 Msa0035080:CDS 50.0%
GTGCTACCGATAGAGGTTAC+TGG + chr1_1:63134326-63134345 Msa0035080:CDS 50.0%
TTTAGCCAAAGCTGGAGTGC+AGG + chr1_1:63134492-63134511 Msa0035080:CDS 50.0%
TCTTCGAGAAGAGTGGTTCG+GGG + chr1_1:63134714-63134733 Msa0035080:CDS 50.0%
CCGTACTTCTCCCCATTCTT+AGG - chr1_1:63134740-63134759 None:intergenic 50.0%
CTCCCTTTGTTGAGGAGGAA+TGG + chr1_1:63134762-63134781 Msa0035080:CDS 50.0%
CTCCCATTCCTCCTCAACAA+AGG - chr1_1:63134768-63134787 None:intergenic 50.0%
GGATCCACCAGTACATCATC+AGG - chr1_1:63134902-63134921 None:intergenic 50.0%
! TGATGTACTGGTGGATCCCT+TGG + chr1_1:63134904-63134923 Msa0035080:CDS 50.0%
TGAAACCCATGACCTCGATC+AGG + chr1_1:63134988-63135007 Msa0035080:CDS 50.0%
TGGACAGCCTATCATTGAGC+AGG + chr1_1:63135929-63135948 Msa0035080:CDS 50.0%
GGGTCATTGACAGAATGTGG+AGG + chr1_1:63136023-63136042 Msa0035080:intron 50.0%
AATGTGGAGGGCGAAACCTA+TGG + chr1_1:63136036-63136055 Msa0035080:CDS 50.0%
AGGATCTAGCAGCGCCAAAT+TGG + chr1_1:63136121-63136140 Msa0035080:CDS 50.0%
GGATCTAGCAGCGCCAAATT+GGG + chr1_1:63136122-63136141 Msa0035080:CDS 50.0%
!! CTGCTAAGGAGTTGGCTTGT+GGG + chr1_1:63136362-63136381 Msa0035080:CDS 50.0%
GAATTGGATGACTCAGCTGC+AGG - chr1_1:63136394-63136413 None:intergenic 50.0%
!! AGGCAATGCGATGGATTGGA+TGG + chr1_1:63136462-63136481 Msa0035080:CDS 50.0%
!! CAATGCGATGGATTGGATGG+TGG + chr1_1:63136465-63136484 Msa0035080:CDS 50.0%
!! TGGATGGTGGACAAGAATGG+AGG + chr1_1:63136478-63136497 Msa0035080:CDS 50.0%
ACCGCTTTCTACCAAGGTCC+TGG + chr1_1:63133981-63134000 Msa0035080:CDS 55.0%
CCCAGGACCTTGGTAGAAAG+CGG - chr1_1:63133985-63134004 None:intergenic 55.0%
CCGCTTTCTACCAAGGTCCT+GGG + chr1_1:63133982-63134001 Msa0035080:CDS 55.0%
GACATACTGGGAAGGTCCCA+TGG - chr1_1:63134125-63134144 None:intergenic 55.0%
! AGTGGTTCGGGGCCTAAGAA+TGG + chr1_1:63134725-63134744 Msa0035080:CDS 55.0%
! GTGGTTCGGGGCCTAAGAAT+GGG + chr1_1:63134726-63134745 Msa0035080:CDS 55.0%
! TGGTTCGGGGCCTAAGAATG+GGG + chr1_1:63134727-63134746 Msa0035080:CDS 55.0%
GCGAACCTGATCGAGGTCAT+GGG - chr1_1:63134996-63135015 None:intergenic 55.0%
ATGCAACGCGAACCTGATCG+AGG - chr1_1:63135003-63135022 None:intergenic 55.0%
AAACGTCGTCGTCGTCGTCA+GGG - chr1_1:63135848-63135867 None:intergenic 55.0%
GAAAGCCCCATTCCCAGCTA+TGG + chr1_1:63135909-63135928 Msa0035080:CDS 55.0%
GCTGTCCATAGCTGGGAATG+GGG - chr1_1:63135917-63135936 None:intergenic 55.0%
GGCTGTCCATAGCTGGGAAT+GGG - chr1_1:63135918-63135937 None:intergenic 55.0%
AGGCTGTCCATAGCTGGGAA+TGG - chr1_1:63135919-63135938 None:intergenic 55.0%
TGCAGGTGGAGCAGGTATGT+TGG - chr1_1:63136326-63136345 None:intergenic 55.0%
GATGCAAATGCAGGTGGAGC+AGG - chr1_1:63136334-63136353 None:intergenic 55.0%
CCACAAGCCAACTCCTTAGC+AGG - chr1_1:63136364-63136383 None:intergenic 55.0%
!! CCTGCTAAGGAGTTGGCTTG+TGG + chr1_1:63136361-63136380 Msa0035080:CDS 55.0%
!! CTAGGACCTCGGAAGTGTCG+TGG - chr1_1:63133824-63133843 None:intergenic 60.0%
GGAATCGGAACCCAGGACCT+TGG - chr1_1:63133995-63134014 None:intergenic 60.0%
GTAGGGTGGAATCGGAACCC+AGG - chr1_1:63134002-63134021 None:intergenic 60.0%
GTACGGGGCTCCCTTTGTTG+AGG + chr1_1:63134754-63134773 Msa0035080:CDS 60.0%
CGCGAACCTGATCGAGGTCA+TGG - chr1_1:63134997-63135016 None:intergenic 60.0%
GAAACGTCGTCGTCGTCGTC+AGG - chr1_1:63135849-63135868 None:intergenic 60.0%
GGCGCTGCTAGATCCTCCTT+TGG - chr1_1:63136117-63136136 None:intergenic 60.0%
GCAGCGCCAAATTGGGTCTC+AGG + chr1_1:63136129-63136148 Msa0035080:CDS 60.0%
CACTTGGGTCGGGCTCCACA+TGG + chr1_1:63134421-63134440 Msa0035080:CDS 65.0%
CGGGGCTCCCTTTGTTGAGG+AGG + chr1_1:63134757-63134776 Msa0035080:CDS 65.0%
CGTCGTCGTCAGGGCATGCA+AGG - chr1_1:63135839-63135858 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 63133816 63137046 63133816 ID=Msa0035080;Name=Msa0035080
chr1_1 mRNA 63133816 63137046 63133816 ID=Msa0035080-mRNA-1;Parent=Msa0035080;Name=Msa0035080-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.8|0.66|1|1|1|6|353|664
chr1_1 exon 63133816 63134137 63133816 ID=Msa0035080-mRNA-1:exon:20052;Parent=Msa0035080-mRNA-1
chr1_1 exon 63134239 63134513 63134239 ID=Msa0035080-mRNA-1:exon:20053;Parent=Msa0035080-mRNA-1
chr1_1 exon 63134662 63135009 63134662 ID=Msa0035080-mRNA-1:exon:20054;Parent=Msa0035080-mRNA-1
chr1_1 exon 63135429 63135950 63135429 ID=Msa0035080-mRNA-1:exon:20055;Parent=Msa0035080-mRNA-1
chr1_1 exon 63136036 63136150 63136036 ID=Msa0035080-mRNA-1:exon:20056;Parent=Msa0035080-mRNA-1
chr1_1 exon 63136281 63137046 63136281 ID=Msa0035080-mRNA-1:exon:20057;Parent=Msa0035080-mRNA-1
chr1_1 CDS 63133816 63134137 63133816 ID=Msa0035080-mRNA-1:cds;Parent=Msa0035080-mRNA-1
chr1_1 CDS 63134239 63134513 63134239 ID=Msa0035080-mRNA-1:cds;Parent=Msa0035080-mRNA-1
chr1_1 CDS 63134662 63135009 63134662 ID=Msa0035080-mRNA-1:cds;Parent=Msa0035080-mRNA-1
chr1_1 CDS 63135429 63135950 63135429 ID=Msa0035080-mRNA-1:cds;Parent=Msa0035080-mRNA-1
chr1_1 CDS 63136036 63136150 63136036 ID=Msa0035080-mRNA-1:cds;Parent=Msa0035080-mRNA-1
chr1_1 CDS 63136281 63136693 63136281 ID=Msa0035080-mRNA-1:cds;Parent=Msa0035080-mRNA-1
chr1_1 three_prime_UTR 63136694 63137046 63136694 ID=Msa0035080-mRNA-1:three_prime_utr;Parent=Msa0035080-mRNA-1
Gene Sequence

>Msa0035080

CTTTTCCACGACACTTCCGAGGTCCTAGAATCTTCTCACAATTTTATTCTTCAAAAAAATCCCAAACATGTTTCTTATCTAATTTCACAATTCACAAACCCTAAGTCCCAAATTTCTCATCAATTTCAAAAATTCTCTCTGTTTTCTGTCAAATCAATGGAAGGAACCGCTTTCTACCAAGGTCCTGGGTTCCGATTCCACCCTACAGATGAAGAAATTGTTCGTTACTACCTTAAGAAAAAACTCACCGGAAATTTACCCTCTTGCTTCGATTATCTCGCTGTCATCGACATCTACAAATTCGAGCCATGGGACCTTCCCAAGATGTCGAAGCTGAAGACAAGGGATTTGGAATGGTACTTCTTCACTGCGTTGGACAAGAAGTATGGTAATAGTATCAGGACGAATCGTGCTACCGATAGAGGTTACTGGAAGACTACTGGCAAGGATCGTGCTATCAAGAATGGAGAGGAGACTGTTGGAATGAAGAAGACACTTGTTTATCACTTGGGTCGGGCTCCACATGGTGATCGAAGCAATTGGGTCATGCATGAGTATAGGATGATTGATGAGACTTTAGCCAAAGCTGGAGTGCAGATGAGATTTGTGTTTGTTTTGGTGGAGAAGGATGCTTATGTCCTGTGTAGGATCTTCGAGAAGAGTGGTTCGGGGCCTAAGAATGGGGAGAAGTACGGGGCTCCCTTTGTTGAGGAGGAATGGGAGAATTTTGGTGAACAAGTGCTACCCTTGCCGCCTGTTGATAATGAACCTTTGAAACTAGAAGGGTTTACTCCTGATGTTGATGAACTCGTGAATCCCTTGGCAGTTTCTGTACCTGATGATGTACTGGTGGATCCCTTGGATGCTTTTTATGACGAGCTTTGGAAAGAAAATGTGCCTGATTCTACTTACGAGGACTTTTTTGAAACCCATGACCTCGATCAGGATATTGATACCAGTAACACAGTTGGAAGTGCTGAACTTCAATCCAACTTCTGTTATGGAGAGTGTAGTACCCATCCTCAGTATTCCCAAGCATTTATTAATGAACGTAAGCAATTGGAAGCCACTCTTGGTATGTATGAACATGAGGTTGATCAGCCTAATAATATATCTGATCTATATGGTGGGAATATCAATTCAGTGCAAGATGGATACAATGGTGGGACAAACCATAACGAAAATCCTTTGAATTTCAATTTTGCATCTGAGGAACTGGATCAATTCTTTGATCCCCCTGATTATCTTACTGATTTGACTGATGAGTACTTGGAAGCCAATGATATTAAGAATCGTGATGAGTTTGTTCCCACTGAGATTGATCCTTCTGTTGCTGCAATGCTAGATGAGTACCTTGCATGCCCTGACGACGACGACGACGTTTCCAAATATATATGCTTGGATTCTCCTTTGAATGCAAGGAGTGAAAGCCCCATTCCCAGCTATGGACAGCCTATCATTGAGCAGAATGTGGAGGGCGAAACCTATGGTAGTTCCTTGACAAACAAACATGTTTTTGAAGCACAATCTTGTCATGAAGATTTACCAAAGGAGGATCTAGCAGCGCCAAATTGGGTCTCAGGAGATGCAAACACTTTTGTGAAGCATGCCAATAGGTTGTTGGCCAACATACCTGCTCCACCTGCATTTGCATCAGAGTTTCCTGCTAAGGAGTTGGCTTGTGGGACACACCCTGCAGCTGAGTCATCCAATTCAGCTCATATAACTGCAGGTATGATCAGCATTACAGACATTACTTTTAGAGGCAATGCGATGGATTGGATGGTGGACAAGAATGGAGGTTTTAACACCGTTATGTCTACTGGGTTTTCCCAAACTGATGTTAACTCTGCTACTTTGGTGCCTATTTCTGGCTTGGTCTGTAGCAAAACTGCATTTATGTTATCACATGGTTGGGTTTTCTTGATGGGTTTCTCAGTTGTGATCCTTTCACTGAGTTTCAAGATCGGAAGCTTCATGTATACGGGTAAATGA
Protein sequence

>Msa0035080

LFHDTSEVLESSHNFILQKNPKHVSYLISQFTNPKSQISHQFQKFSLFSVKSMEGTAFYQGPGFRFHPTDEEIVRYYLKKKLTGNLPSCFDYLAVIDIYKFEPWDLPKMSKLKTRDLEWYFFTALDKKYGNSIRTNRATDRGYWKTTGKDRAIKNGEETVGMKKTLVYHLGRAPHGDRSNWVMHEYRMIDETLAKAGVQMRFVFVLVEKDAYVLCRIFEKSGSGPKNGEKYGAPFVEEEWENFGEQVLPLPPVDNEPLKLEGFTPDVDELVNPLAVSVPDDVLVDPLDAFYDELWKENVPDSTYEDFFETHDLDQDIDTSNTVGSAELQSNFCYGECSTHPQYSQAFINERKQLEATLGMYEHEVDQPNNISDLYGGNINSVQDGYNGGTNHNENPLNFNFASEELDQFFDPPDYLTDLTDEYLEANDIKNRDEFVPTEIDPSVAAMLDEYLACPDDDDDVSKYICLDSPLNARSESPIPSYGQPIIEQNVEGETYGSSLTNKHVFEAQSCHEDLPKEDLAAPNWVSGDANTFVKHANRLLANIPAPPAFASEFPAKELACGTHPAAESSNSAHITAGMISITDITFRGNAMDWMVDKNGGFNTVMSTGFSQTDVNSATLVPISGLVCSKTAFMLSHGWVFLMGFSVVILSLSFKIGSFMYTGK*