Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0078510 | XP_013468877.1 | 95.395 | 608 | 27 | 1 | 37 | 643 | 1 | 608 | 0.0 | 1174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0078510 | sp|Q43092|SSG1_PEA | 84.918 | 610 | 82 | 4 | 37 | 643 | 1 | 603 | 0.0 | 1050 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0078510 | A0A072VLQ9 | 95.395 | 608 | 27 | 1 | 37 | 643 | 1 | 608 | 0.0 | 1174 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031220 | Msa0078510 | 0.927299 | 1.425907e-91 | -8.615850e-47 |
| Msa0078510 | Msa0126290 | 0.991952 | 1.840397e-190 | -8.615850e-47 |
| Msa0078510 | Msa0137200 | 0.814618 | 1.405613e-51 | -8.615850e-47 |
| Msa0078510 | Msa0171170 | 0.939311 | 1.574315e-99 | -8.615850e-47 |
| Msa0078510 | Msa0182380 | 0.841050 | 6.009361e-58 | -8.615850e-47 |
| Msa0078510 | Msa0196370 | 0.830092 | 3.567702e-55 | -8.615850e-47 |
| Msa0078510 | Msa0238260 | 0.832465 | 9.308785e-56 | -8.615850e-47 |
| Msa0078510 | Msa0275690 | 0.838059 | 3.600011e-57 | -8.615850e-47 |
| Msa0078510 | Msa0316280 | 0.814160 | 1.774353e-51 | -8.615850e-47 |
| Msa0078510 | Msa0369360 | 0.810350 | 1.203909e-50 | -8.615850e-47 |
| Msa0078510 | Msa0463460 | 0.818080 | 2.361908e-52 | -8.615850e-47 |
| Msa0078510 | Msa0479740 | 0.828331 | 9.540818e-55 | -8.615850e-47 |
| Msa0078510 | Msa0509020 | 0.810898 | 9.168212e-51 | -8.615850e-47 |
| Msa0078510 | Msa1109520 | 0.806456 | 8.156048e-50 | -8.615850e-47 |
| Msa0078510 | Msa1404500 | 0.847897 | 8.647746e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0078510 | MtrunA17_Chr1g0189131 | 95.395 | 608 | 27 | 1 | 37 | 643 | 1 | 608 | 0.0 | 1174 |
| Msa0078510 | MtrunA17_Chr8g0345941 | 74.177 | 577 | 144 | 2 | 71 | 643 | 41 | 616 | 0.0 | 876 |
| Msa0078510 | MtrunA17_Chr6g0453261 | 41.061 | 509 | 270 | 10 | 117 | 617 | 267 | 753 | 6.46e-116 | 363 |
| Msa0078510 | MtrunA17_Chr3g0126911 | 39.083 | 545 | 280 | 15 | 101 | 615 | 123 | 645 | 6.18e-111 | 347 |
| Msa0078510 | MtrunA17_Chr4g0051911 | 29.889 | 542 | 284 | 20 | 116 | 616 | 481 | 967 | 1.60e-51 | 192 |
| Msa0078510 | MtrunA17_Chr2g0288461 | 27.160 | 567 | 304 | 18 | 78 | 608 | 602 | 1095 | 2.01e-46 | 177 |
| Msa0078510 | MtrunA17_Chr5g0411441 | 22.667 | 450 | 298 | 14 | 104 | 536 | 178 | 594 | 3.27e-19 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0078510 | AT1G32900.1 | 71.031 | 611 | 172 | 4 | 37 | 643 | 1 | 610 | 0.0 | 877 |
| Msa0078510 | AT3G01180.1 | 40.331 | 543 | 289 | 11 | 85 | 617 | 270 | 787 | 1.03e-113 | 359 |
| Msa0078510 | AT5G24300.2 | 36.748 | 615 | 334 | 14 | 26 | 615 | 57 | 641 | 1.86e-110 | 347 |
| Msa0078510 | AT5G24300.1 | 36.748 | 615 | 334 | 14 | 26 | 615 | 57 | 641 | 1.86e-110 | 347 |
| Msa0078510 | AT4G18240.1 | 29.795 | 537 | 285 | 19 | 115 | 612 | 540 | 1023 | 4.94e-53 | 197 |
| Msa0078510 | AT1G11720.1 | 29.038 | 551 | 299 | 15 | 85 | 608 | 545 | 1030 | 8.62e-53 | 196 |
| Msa0078510 | AT1G11720.2 | 29.038 | 551 | 299 | 15 | 85 | 608 | 597 | 1082 | 8.77e-53 | 196 |
Find 173 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGACTTGGTGATGTTCT+TGG | 0.252319 | 1_2:-56107512 | Msa0078510:CDS |
| TATATATATGTTGCTTAAAA+AGG | 0.254053 | 1_2:+56103593 | None:intergenic |
| GCAGAGTGCAGTAAGATTAT+AGG | 0.275918 | 1_2:-56103702 | Msa0078510:three_prime_UTR |
| AATCTTGAGCCATGCAGTTC+TGG | 0.280666 | 1_2:+56104071 | None:intergenic |
| TATGCCAAGGAACTTGTTTC+CGG | 0.292552 | 1_2:-56105280 | Msa0078510:CDS |
| TGGTGGACTTCCACCTGTTT+TGG | 0.300685 | 1_2:-56107492 | Msa0078510:CDS |
| TGCAGGGACCAGCCAAACTA+TGG | 0.307764 | 1_2:-56103896 | Msa0078510:intron |
| GGGTGCATGCCTCAATTTCC+AGG | 0.341739 | 1_2:-56107774 | Msa0078510:CDS |
| GATTATCTCTTGCATGGCTT+GGG | 0.348471 | 1_2:+56104093 | None:intergenic |
| GGATTATCTCTTGCATGGCT+TGG | 0.348500 | 1_2:+56104092 | None:intergenic |
| ATTCATCAACTACGATTTAC+CGG | 0.361965 | 1_2:+56103667 | None:intergenic |
| GACAATATCATTCGTTCAAC+TGG | 0.368569 | 1_2:-56105235 | Msa0078510:CDS |
| TTATGTTCTGCAAATTTCAT+TGG | 0.368766 | 1_2:+56103563 | None:intergenic |
| AAACTCTATGGTCCTAAAAC+TGG | 0.369328 | 1_2:-56106717 | Msa0078510:CDS |
| AGTTCCAAGGTACAATGATT+AGG | 0.373220 | 1_2:+56103627 | None:intergenic |
| GGCAACGAACCTGGAATAGA+TGG | 0.380159 | 1_2:-56103843 | Msa0078510:CDS |
| AGTGTGTGGTGGAATGAATT+TGG | 0.381081 | 1_2:-56107573 | Msa0078510:CDS |
| GACAAGAGTATCCCTTTGAT+AGG | 0.395078 | 1_2:-56104979 | Msa0078510:CDS |
| ATCTCCTCTCCATCTATTCC+AGG | 0.397331 | 1_2:+56103834 | None:intergenic |
| CAATTACATGCCATGCCATA+TGG | 0.397832 | 1_2:-56104610 | Msa0078510:CDS |
| CATATCCTGGCAAGGCAATC+GGG | 0.403532 | 1_2:-56104726 | Msa0078510:CDS |
| TCGATGTATTTATCAGTTTG+TGG | 0.404855 | 1_2:+56105169 | None:intergenic |
| CCACAAGGCTCAAATCTACT+TGG | 0.408419 | 1_2:+56104640 | None:intergenic |
| TTGGCTCACAAAATAATTGC+TGG | 0.409575 | 1_2:-56104682 | Msa0078510:CDS |
| GAACTATTATCTGAACATTC+TGG | 0.409656 | 1_2:+56104887 | None:intergenic |
| AGAACACAGAGGTGTGGAAT+TGG | 0.412338 | 1_2:-56105257 | Msa0078510:CDS |
| CAGTGCGTTCTCCCATAGTT+TGG | 0.414595 | 1_2:+56103884 | None:intergenic |
| GTGCCCATCGTTTCATCAAC+TGG | 0.419733 | 1_2:-56104333 | Msa0078510:CDS |
| AGTGAATAAAGGTCTATTCC+AGG | 0.421292 | 1_2:-56103514 | Msa0078510:three_prime_UTR |
| GATAACTTATCTACATCATC+TGG | 0.425102 | 1_2:+56104151 | None:intergenic |
| TGATTACTCACCAGTGCTCC+TGG | 0.426710 | 1_2:+56108016 | None:intergenic |
| TGAAATCAATGTACAAGTCT+AGG | 0.429447 | 1_2:-56105743 | Msa0078510:CDS |
| TAGATTCAGCTTGTTATGTC+AGG | 0.430029 | 1_2:-56106670 | Msa0078510:intron |
| TTGCATGGCTTGGGTACCAT+AGG | 0.431090 | 1_2:+56104102 | None:intergenic |
| TGAAGGGAAGGAAAATCAAT+TGG | 0.431550 | 1_2:-56105354 | Msa0078510:CDS |
| ACATATCCTGGCAAGGCAAT+CGG | 0.432716 | 1_2:-56104727 | Msa0078510:CDS |
| CTTTGATAGGATTCATTGGC+AGG | 0.436538 | 1_2:-56104966 | Msa0078510:CDS |
| TAGTCTTCGTTGCCAATGAT+TGG | 0.437773 | 1_2:-56105791 | Msa0078510:CDS |
| GCCACTCCATGAGCATCAAT+AGG | 0.438764 | 1_2:-56103786 | Msa0078510:exon |
| AACCAGGCCTTTACTTATGT+TGG | 0.440617 | 1_2:-56107701 | Msa0078510:CDS |
| ATGAGTGAGAAGAGTGAGAG+TGG | 0.440650 | 1_2:-56107614 | Msa0078510:CDS |
| ATCCCTTTGATAGGATTCAT+TGG | 0.441198 | 1_2:-56104970 | Msa0078510:CDS |
| AATGCAGTCTAAGTGAATAA+AGG | 0.445544 | 1_2:-56103525 | Msa0078510:three_prime_UTR |
| AAGAGCAGTGTGCCAATCAT+TGG | 0.452656 | 1_2:+56105779 | None:intergenic |
| ACTGTGAAAGAAGGCTATAC+AGG | 0.454630 | 1_2:-56104297 | Msa0078510:CDS |
| AACAAACTTACAGCCAAAAC+AGG | 0.454783 | 1_2:+56107479 | None:intergenic |
| AACAGCAGCAAATATTTCTC+AGG | 0.455902 | 1_2:-56105928 | Msa0078510:CDS |
| GAAATCAATGTACAAGTCTA+GGG | 0.457571 | 1_2:-56105742 | Msa0078510:CDS |
| TTCCACACCTCTGTGTTCTC+CGG | 0.465353 | 1_2:+56105261 | None:intergenic |
| GCTACCCCGATTGCCTTGCC+AGG | 0.465671 | 1_2:+56104721 | None:intergenic |
| AACTATGAGGGGTTCTTCTG+TGG | 0.465840 | 1_2:-56107795 | Msa0078510:CDS |
| GCGTTCTCCCATAGTTTGGC+TGG | 0.466225 | 1_2:+56103888 | None:intergenic |
| AAAGGGATACTCTTGTCAAC+AGG | 0.467239 | 1_2:+56104985 | None:intergenic |
| CTCTTCTCATCATTGTTAGC+AGG | 0.467353 | 1_2:-56108047 | Msa0078510:CDS |
| ACATAATCATGGCAACTATG+AGG | 0.472184 | 1_2:-56107808 | Msa0078510:CDS |
| AGCAAAATTCAATGGCCCCT+TGG | 0.472444 | 1_2:-56104701 | Msa0078510:CDS |
| AAAGAGCTTCTGAATTCATC+AGG | 0.472676 | 1_2:+56105550 | None:intergenic |
| CTGTTTAAGTTCAAAACCCT+TGG | 0.474928 | 1_2:+56105946 | None:intergenic |
| CAGCTGGAGGTAACATATCC+TGG | 0.475441 | 1_2:-56104739 | Msa0078510:CDS |
| AAATATTTCTCAGGACCATA+TGG | 0.478714 | 1_2:-56105919 | Msa0078510:intron |
| GGAGAAGCAAATTGAGCAGC+TGG | 0.478845 | 1_2:-56104755 | Msa0078510:CDS |
| GAGGTCGCAGGCAACGAACC+TGG | 0.481045 | 1_2:-56103852 | Msa0078510:CDS |
| TACATTGATTTCAAGTAGCA+TGG | 0.483987 | 1_2:+56105753 | None:intergenic |
| AAGACCGAGTCAAAACTCTA+TGG | 0.484633 | 1_2:-56106729 | Msa0078510:CDS |
| CAAAATGTAGTAGGCCATGT+TGG | 0.485472 | 1_2:-56108108 | Msa0078510:exon |
| GTACCTTGGAACTTAGTTGA+AGG | 0.488096 | 1_2:-56103617 | Msa0078510:three_prime_UTR |
| CTGAAAAGGCGTGTCTTCCC+TGG | 0.489745 | 1_2:+56105593 | None:intergenic |
| AAAATCAATTGGATGAAGGC+TGG | 0.490353 | 1_2:-56105343 | Msa0078510:CDS |
| TATTCATAACATCGCCTACC+AGG | 0.491456 | 1_2:-56105611 | Msa0078510:CDS |
| GAAGCTCTTCAAGCTGAGGT+TGG | 0.493585 | 1_2:-56105012 | Msa0078510:CDS |
| TTCTCCGGAAACAAGTTCCT+TGG | 0.495791 | 1_2:+56105276 | None:intergenic |
| AAAATCGTTATCTAATACAT+GGG | 0.497803 | 1_2:-56103732 | Msa0078510:three_prime_UTR |
| GTTCTGGATTATCTCTTGCA+TGG | 0.498846 | 1_2:+56104087 | None:intergenic |
| CAACTTTCAGGCTGCACTTG+AGG | 0.499297 | 1_2:-56105971 | Msa0078510:intron |
| ATAAGCTCTACCGTTCCATA+TGG | 0.500986 | 1_2:+56104595 | None:intergenic |
| AAAGAAACTTTCAAATAACC+TGG | 0.501990 | 1_2:+56103496 | None:intergenic |
| GGCTGCACTTGAGGCACCAA+GGG | 0.505905 | 1_2:-56105962 | Msa0078510:CDS |
| CAGGTATACTACACCTGTGA+AGG | 0.511341 | 1_2:-56105371 | Msa0078510:CDS |
| TGGAGAGGAGATTGCTCCAC+TGG | 0.512116 | 1_2:-56103823 | Msa0078510:CDS |
| CATAATCATGGCAACTATGA+GGG | 0.512735 | 1_2:-56107807 | Msa0078510:CDS |
| ACTATGAGGGGTTCTTCTGT+GGG | 0.513464 | 1_2:-56107794 | Msa0078510:CDS |
| GGACTTGGTGATGTTCTTGG+TGG | 0.517016 | 1_2:-56107509 | Msa0078510:CDS |
| AGAAGAATTTGACATAATCA+TGG | 0.519378 | 1_2:-56107819 | Msa0078510:CDS |
| AAAATGTAGTAGGCCATGTT+GGG | 0.520389 | 1_2:-56108107 | Msa0078510:exon |
| AACCAACATAAGTAAAGGCC+TGG | 0.520467 | 1_2:+56107699 | None:intergenic |
| GGTATCACTGGTATCGTGAA+TGG | 0.523833 | 1_2:-56105214 | Msa0078510:CDS |
| TCTCAAACCAACATAAGTAA+AGG | 0.525128 | 1_2:+56107694 | None:intergenic |
| TTGGAGCTGAAGTTGGACCT+TGG | 0.526427 | 1_2:-56107544 | Msa0078510:CDS |
| TGCCAATGAATCCTATCAAA+GGG | 0.530139 | 1_2:+56104968 | None:intergenic |
| ATCGGGGTAGCAAAATTCAA+TGG | 0.530949 | 1_2:-56104709 | Msa0078510:CDS |
| ATTCGTTCAACTGGTATCAC+TGG | 0.533593 | 1_2:-56105226 | Msa0078510:CDS |
| TCCACGTGTCAAAATGTAGT+AGG | 0.534629 | 1_2:-56108117 | Msa0078510:five_prime_UTR |
| GAGAAGAGCGAAGTCTGAAA+AGG | 0.536104 | 1_2:+56105579 | None:intergenic |
| GGAGATTGCTCCACTGGCAA+AGG | 0.537895 | 1_2:-56103817 | Msa0078510:CDS |
| ATGATCAATACAAGGATGCA+TGG | 0.538053 | 1_2:-56107113 | Msa0078510:CDS |
| CTGTTGAGCCTCGAGGTCGC+AGG | 0.539159 | 1_2:-56103864 | Msa0078510:CDS |
| CCACTCCATGAGCATCAATA+GGG | 0.543596 | 1_2:-56103785 | Msa0078510:exon |
| GGTACACTCTCCAGGAGCAC+TGG | 0.543700 | 1_2:-56108026 | Msa0078510:intron |
| ACGAGAGCCCTTAAAACCTA+TGG | 0.543829 | 1_2:-56104118 | Msa0078510:CDS |
| TAATGACCGTATCTAAAATG+AGG | 0.547425 | 1_2:+56103758 | None:intergenic |
| TGTTAGCAGGTACACTCTCC+AGG | 0.551706 | 1_2:-56108034 | Msa0078510:CDS |
| TGTTTGTTGTAGCTCAAAGT+TGG | 0.552081 | 1_2:-56106971 | Msa0078510:intron |
| CTGCCAATGAATCCTATCAA+AGG | 0.556180 | 1_2:+56104967 | None:intergenic |
| CGCGATCAACTCCTCTCTTG+TGG | 0.556317 | 1_2:+56106915 | None:intergenic |
| TGGAGTAAGACTGGTGGACT+TGG | 0.556639 | 1_2:-56107524 | Msa0078510:CDS |
| GATATCCCTATTGATGCTCA+TGG | 0.558967 | 1_2:+56103780 | None:intergenic |
| TTCTTTCACTGCCACAAGAG+AGG | 0.559392 | 1_2:-56106926 | Msa0078510:CDS |
| CTCTCAACAAGCTGCACGTG+CGG | 0.562469 | 1_2:-56107670 | Msa0078510:CDS |
| ACAAGTTCCTTGGCATAATG+TGG | 0.565321 | 1_2:+56105286 | None:intergenic |
| AAGGAAAATCAATTGGATGA+AGG | 0.565800 | 1_2:-56105347 | Msa0078510:CDS |
| CACTGGTATCGTGAATGGCA+TGG | 0.566020 | 1_2:-56105209 | Msa0078510:CDS |
| GTTGACTTTGAATAATAACC+AGG | 0.573316 | 1_2:-56107717 | Msa0078510:CDS |
| CTCTACCGTTCCATATGGCA+TGG | 0.581372 | 1_2:+56104600 | None:intergenic |
| CTTGTTGACACTGTGAAAGA+AGG | 0.581668 | 1_2:-56104306 | Msa0078510:CDS |
| GCAGGGACCAGCCAAACTAT+GGG | 0.586907 | 1_2:-56103895 | Msa0078510:intron |
| ATACTACACCTGTGAAGGGA+AGG | 0.587286 | 1_2:-56105366 | Msa0078510:CDS |
| TGATCAATACAAGGATGCAT+GGG | 0.587857 | 1_2:-56107112 | Msa0078510:CDS |
| AAGGGGAAAATAGTGTGTGG+TGG | 0.588002 | 1_2:-56107584 | Msa0078510:CDS |
| CACAAGGCTCAAATCTACTT+GGG | 0.588006 | 1_2:+56104641 | None:intergenic |
| CCAAGTAGATTTGAGCCTTG+TGG | 0.590941 | 1_2:-56104640 | Msa0078510:CDS |
| GAAAGAAGCTCTTCAAGCTG+AGG | 0.591901 | 1_2:-56105016 | Msa0078510:CDS |
| GGAACCTAATCATTGTACCT+TGG | 0.592224 | 1_2:-56103631 | Msa0078510:three_prime_UTR |
| CCCTATTGATGCTCATGGAG+TGG | 0.595038 | 1_2:+56103785 | None:intergenic |
| GTTGGACCTTGGAGTAAGAC+TGG | 0.596664 | 1_2:-56107533 | Msa0078510:CDS |
| GGACCTTCAACTAAGTTCCA+AGG | 0.607693 | 1_2:+56103614 | None:intergenic |
| TTCCGGAGAACACAGAGGTG+TGG | 0.607835 | 1_2:-56105263 | Msa0078510:CDS |
| TCCACTGGCAAAGGAAAATG+TGG | 0.611171 | 1_2:-56103808 | Msa0078510:CDS |
| ACCACCAGTTGATGAAACGA+TGG | 0.611672 | 1_2:+56104329 | None:intergenic |
| AACTACGATTTACCGGCTTG+AGG | 0.611964 | 1_2:+56103674 | None:intergenic |
| AAGAAGAGTGTAACCCAACA+TGG | 0.614207 | 1_2:+56108094 | None:intergenic |
| GGCTATACAGGATTCCACGC+TGG | 0.615421 | 1_2:-56104285 | Msa0078510:CDS |
| AGGCTGCACTTGAGGCACCA+AGG | 0.615883 | 1_2:-56105963 | Msa0078510:CDS |
| TTGGAATATGAAAGGTGTGG+GGG | 0.621316 | 1_2:-56106752 | Msa0078510:intron |
| GGAGGTAACATATCCTGGCA+AGG | 0.628738 | 1_2:-56104734 | Msa0078510:CDS |
| AAAGGCGTGTCTTCCCTGGT+AGG | 0.630758 | 1_2:+56105597 | None:intergenic |
| CCACCAGTTGATGAAACGAT+GGG | 0.631976 | 1_2:+56104330 | None:intergenic |
| ACATGCCATGCCATATGGAA+CGG | 0.632375 | 1_2:-56104605 | Msa0078510:intron |
| ATAATCATGGCAACTATGAG+GGG | 0.633095 | 1_2:-56107806 | Msa0078510:CDS |
| AGGTATACTACACCTGTGAA+GGG | 0.634448 | 1_2:-56105370 | Msa0078510:CDS |
| GGTGCATGCCTCAATTTCCA+GGG | 0.635599 | 1_2:-56107773 | Msa0078510:CDS |
| TTATAGGCGTAGCCTCAAGC+CGG | 0.635841 | 1_2:-56103686 | Msa0078510:three_prime_UTR |
| ATATCCTGGCAAGGCAATCG+GGG | 0.636935 | 1_2:-56104725 | Msa0078510:CDS |
| CGCTGGAGCGTTCAACGTGG+AGG | 0.637600 | 1_2:-56104268 | Msa0078510:intron |
| ACCGCGTTATGATCAATACA+AGG | 0.637600 | 1_2:-56107121 | Msa0078510:CDS |
| AGAAGACGAAGCAGCACGTG+CGG | 0.638038 | 1_2:+56107643 | None:intergenic |
| GGCAGGCTAGAAGAGCAGAA+AGG | 0.639584 | 1_2:-56104949 | Msa0078510:CDS |
| GTTCGTTGCCTGCGACCTCG+AGG | 0.639956 | 1_2:+56103856 | None:intergenic |
| AAATCAATGTACAAGTCTAG+GGG | 0.641348 | 1_2:-56105741 | Msa0078510:CDS |
| AGTCCACCAGTCTTACTCCA+AGG | 0.645736 | 1_2:+56107527 | None:intergenic |
| CGAACCTGGAATAGATGGAG+AGG | 0.647618 | 1_2:-56103838 | Msa0078510:CDS |
| AAACTTACAGCCAAAACAGG+TGG | 0.650863 | 1_2:+56107482 | None:intergenic |
| CCCATCGTTTCATCAACTGG+TGG | 0.651767 | 1_2:-56104330 | Msa0078510:CDS |
| ACTTACAGTGAACACTCGGT+CGG | 0.652659 | 1_2:+56105309 | None:intergenic |
| ATTCATAACATCGCCTACCA+GGG | 0.655105 | 1_2:-56105610 | Msa0078510:CDS |
| GTGGACTTACAGTGAACACT+CGG | 0.656424 | 1_2:+56105305 | None:intergenic |
| AGAGATAATCCAGAACTGCA+TGG | 0.661718 | 1_2:-56104080 | Msa0078510:CDS |
| GAACGCACTGTTGAGCCTCG+AGG | 0.665022 | 1_2:-56103871 | Msa0078510:CDS |
| TGTAAGTCCACATTATGCCA+AGG | 0.667821 | 1_2:-56105293 | Msa0078510:CDS |
| TTTAAGGGGAAAATAGTGTG+TGG | 0.678632 | 1_2:-56107587 | Msa0078510:CDS |
| GAAGCAAATTGAGCAGCTGG+AGG | 0.687655 | 1_2:-56104752 | Msa0078510:CDS |
| CCACGTTGAACGCTCCAGCG+TGG | 0.696561 | 1_2:+56104271 | None:intergenic |
| TGTAATTGAACTAGACCACA+AGG | 0.698693 | 1_2:+56104625 | None:intergenic |
| TTTGGAATATGAAAGGTGTG+GGG | 0.705387 | 1_2:-56106753 | Msa0078510:intron |
| ATGGCATGGATAATCGTGAG+TGG | 0.706253 | 1_2:-56105195 | Msa0078510:CDS |
| AATCAATGTACAAGTCTAGG+GGG | 0.707090 | 1_2:-56105740 | Msa0078510:CDS |
| GGACCTTGGAGTAAGACTGG+TGG | 0.707930 | 1_2:-56107530 | Msa0078510:CDS |
| GGATACTGATGTGTCTGTCG+AGG | 0.708137 | 1_2:-56107091 | Msa0078510:intron |
| CCACGCTGGAGCGTTCAACG+TGG | 0.710739 | 1_2:-56104271 | Msa0078510:CDS |
| CTTGTTTCCGGAGAACACAG+AGG | 0.719349 | 1_2:-56105268 | Msa0078510:CDS |
| TCCTTGTATTGATCATAACG+CGG | 0.721750 | 1_2:+56107120 | None:intergenic |
| TGATGAATGAGTTCTAACGA+AGG | 0.732138 | 1_2:-56103652 | Msa0078510:three_prime_UTR |
| TAACAATGATGAGAAGAGTG+TGG | 0.736932 | 1_2:+56108052 | None:intergenic |
| GCGGTGATACAGTCATAACA+CGG | 0.782318 | 1_2:+56107139 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAATTAAATCATCAC+AGG | + | chr1_2:56104419-56104438 | None:intergenic | 15.0% |
| !!! | TGTGATGATTTAATTATTTT+AGG | - | chr1_2:56104418-56104437 | Msa0078510:intron | 15.0% |
| !!! | GTGATGATTTAATTATTTTA+GGG | - | chr1_2:56104419-56104438 | Msa0078510:intron | 15.0% |
| !!! | ATTTAATTATTTTAGGGAAA+TGG | - | chr1_2:56104425-56104444 | Msa0078510:intron | 15.0% |
| !!! | TTTAATTATTTTAGGGAAAT+GGG | - | chr1_2:56104426-56104445 | Msa0078510:intron | 15.0% |
| !! | ATTCAAATTCAATCTTATAA+AGG | + | chr1_2:56104782-56104801 | None:intergenic | 15.0% |
| !! | TAAACTAAAAGATTATAACT+TGG | - | chr1_2:56107389-56107408 | Msa0078510:intron | 15.0% |
| !! | AAACTAAAAGATTATAACTT+GGG | - | chr1_2:56107390-56107409 | Msa0078510:intron | 15.0% |
| !!! | TATATATATGTTGCTTAAAA+AGG | + | chr1_2:56108000-56108019 | None:intergenic | 15.0% |
| !! | CATCCTTATGTTTAAATTTA+CGG | - | chr1_2:56104149-56104168 | Msa0078510:CDS | 20.0% |
| !! | GTATAATTCTTGAAAGAAAT+TGG | - | chr1_2:56104551-56104570 | Msa0078510:intron | 20.0% |
| !! | ATGTAAATAAATCATCAACA+AGG | + | chr1_2:56104584-56104603 | None:intergenic | 20.0% |
| !!! | GTTAAACTGACTTTATTTTT+TGG | - | chr1_2:56104812-56104831 | Msa0078510:intron | 20.0% |
| !! | AATACACAAAAGTTAATAGA+GGG | + | chr1_2:56104984-56105003 | None:intergenic | 20.0% |
| !! | AAATACACAAAAGTTAATAG+AGG | + | chr1_2:56104985-56105004 | None:intergenic | 20.0% |
| !!! | CTATTAACTTTTGTGTATTT+TGG | - | chr1_2:56104985-56105004 | Msa0078510:CDS | 20.0% |
| !! | ATTGTAAAGTGATTTATGTT+TGG | + | chr1_2:56105165-56105184 | None:intergenic | 20.0% |
| !!! | ATTCATGTTTTTTTTACTTC+AGG | - | chr1_2:56106793-56106812 | Msa0078510:intron | 20.0% |
| !!! | TTCATGTTTTTTTTACTTCA+GGG | - | chr1_2:56106794-56106813 | Msa0078510:intron | 20.0% |
| !!! | AATTTGAAATGGCAAATAAA+AGG | + | chr1_2:56107022-56107041 | None:intergenic | 20.0% |
| !! | AAAAATCGTTATCTAATACA+TGG | - | chr1_2:56107857-56107876 | Msa0078510:intron | 20.0% |
| !! | AAAATCGTTATCTAATACAT+GGG | - | chr1_2:56107858-56107877 | Msa0078510:intron | 20.0% |
| ! | ATAATAGTATATGTGACAGA+AGG | + | chr1_2:56103706-56103725 | None:intergenic | 25.0% |
| !!! | TCCAACTATGTTGATAATTT+TGG | - | chr1_2:56103729-56103748 | Msa0078510:three_prime_UTR | 25.0% |
| ! | ACCAAAATTATCAACATAGT+TGG | + | chr1_2:56103733-56103752 | None:intergenic | 25.0% |
| ! | AGAAGAATTTGACATAATCA+TGG | - | chr1_2:56103771-56103790 | Msa0078510:three_prime_UTR | 25.0% |
| !! | ATAGAAATACAACCTTTTCA+AGG | + | chr1_2:56104723-56104742 | None:intergenic | 25.0% |
| !!! | ATTTAGTTTTCATCAATCAG+TGG | - | chr1_2:56104744-56104763 | Msa0078510:CDS | 25.0% |
| !!! | TGACTTTATTTTTTGGCATT+TGG | - | chr1_2:56104819-56104838 | Msa0078510:intron | 25.0% |
| !! | TTATAATCAGTTCCAGTTTT+AGG | + | chr1_2:56104888-56104907 | None:intergenic | 25.0% |
| !! | TTGCTTCAACTATTGAATTT+TGG | - | chr1_2:56105099-56105118 | Msa0078510:intron | 25.0% |
| !! | AGTCATGTATTTCAATTTTC+AGG | - | chr1_2:56105426-56105445 | Msa0078510:intron | 25.0% |
| ! | AAAACACAAATCTTAGTCTA+GGG | + | chr1_2:56105465-56105484 | None:intergenic | 25.0% |
| ! | TATATGATGATTGATGAGAT+TGG | - | chr1_2:56105508-56105527 | Msa0078510:intron | 25.0% |
| ! | AGATATGAACATTATCAATG+TGG | - | chr1_2:56105592-56105611 | Msa0078510:CDS | 25.0% |
| ! | GAAATCTATTTAGCATAAGA+AGG | - | chr1_2:56105920-56105939 | Msa0078510:CDS | 25.0% |
| !! | AATGTTCTAATGTGATTTGT+AGG | + | chr1_2:56106099-56106118 | None:intergenic | 25.0% |
| ! | TACAAATCACATTAGAACAT+TGG | - | chr1_2:56106098-56106117 | Msa0078510:intron | 25.0% |
| !!! | TTTTGTTTTGTTTCCTTTTC+AGG | - | chr1_2:56106200-56106219 | Msa0078510:intron | 25.0% |
| !!! | TCATCAAAACTGTCATTTTT+AGG | - | chr1_2:56106529-56106548 | Msa0078510:intron | 25.0% |
| !!! | TAATTAGCATAGCTTTGTTT+AGG | + | chr1_2:56106774-56106793 | None:intergenic | 25.0% |
| ! | CAGGAAATTCAAATTTGAAA+TGG | + | chr1_2:56107033-56107052 | None:intergenic | 25.0% |
| ! | TTATGTTCTGCAAATTTCAT+TGG | + | chr1_2:56108030-56108049 | None:intergenic | 25.0% |
| ! | AAAGAAACTTTCAAATAACC+TGG | + | chr1_2:56108097-56108116 | None:intergenic | 25.0% |
| ! | GTTGACTTTGAATAATAACC+AGG | - | chr1_2:56103873-56103892 | Msa0078510:CDS | 30.0% |
| TCTCAAACCAACATAAGTAA+AGG | + | chr1_2:56103899-56103918 | None:intergenic | 30.0% | |
| ! | AGTGAGAGTGGAAATTTTAA+GGG | - | chr1_2:56103988-56104007 | Msa0078510:intron | 30.0% |
| !!! | GGAATGAATTTGGTTTTTGT+TGG | - | chr1_2:56104027-56104046 | Msa0078510:intron | 30.0% |
| CCACCGTAAATTTAAACATA+AGG | + | chr1_2:56104155-56104174 | None:intergenic | 30.0% | |
| CCTTATGTTTAAATTTACGG+TGG | - | chr1_2:56104152-56104171 | Msa0078510:CDS | 30.0% | |
| ATTTACTGTGAATACATGCA+TGG | - | chr1_2:56104252-56104271 | Msa0078510:intron | 30.0% | |
| ! | TTTGGCATTTGGAATATGAA+AGG | - | chr1_2:56104830-56104849 | Msa0078510:intron | 30.0% |
| ! | ATTTGGAATATGAAAGGTGT+GGG | - | chr1_2:56104836-56104855 | Msa0078510:intron | 30.0% |
| ! | AGAATTGATTTCGACTTGTT+TGG | - | chr1_2:56105045-56105064 | Msa0078510:intron | 30.0% |
| !! | TTCTTGAGTGCAATTGATTT+TGG | - | chr1_2:56105071-56105090 | Msa0078510:intron | 30.0% |
| GGATAAATTCATGCAAAAGT+GGG | + | chr1_2:56105144-56105163 | None:intergenic | 30.0% | |
| TGGATAAATTCATGCAAAAG+TGG | + | chr1_2:56105145-56105164 | None:intergenic | 30.0% | |
| !! | TAATTAACGAGCTTTGAGTT+TGG | + | chr1_2:56105253-56105272 | None:intergenic | 30.0% |
| CAAAGCTCGTTAATTACTAT+TGG | - | chr1_2:56105257-56105276 | Msa0078510:CDS | 30.0% | |
| CCAATAATAAGTGAATGACT+GGG | - | chr1_2:56105303-56105322 | Msa0078510:CDS | 30.0% | |
| ! | AATCACAGTATTTGCTCTTT+TGG | - | chr1_2:56105365-56105384 | Msa0078510:CDS | 30.0% |
| CAAAACACAAATCTTAGTCT+AGG | + | chr1_2:56105466-56105485 | None:intergenic | 30.0% | |
| ! | CATATCTAGAGTCAGTATAA+AGG | + | chr1_2:56105579-56105598 | None:intergenic | 30.0% |
| AAATATTTCTCAGGACCATA+TGG | - | chr1_2:56105671-56105690 | Msa0078510:intron | 30.0% | |
| !! | TACATTGATTTCAAGTAGCA+TGG | + | chr1_2:56105840-56105859 | None:intergenic | 30.0% |
| TGAAATCAATGTACAAGTCT+AGG | - | chr1_2:56105847-56105866 | Msa0078510:intron | 30.0% | |
| GAAATCAATGTACAAGTCTA+GGG | - | chr1_2:56105848-56105867 | Msa0078510:intron | 30.0% | |
| AAATCAATGTACAAGTCTAG+GGG | - | chr1_2:56105849-56105868 | Msa0078510:intron | 30.0% | |
| !! | GTGAGGATTTGTTTACTTTT+CGG | - | chr1_2:56105891-56105910 | Msa0078510:intron | 30.0% |
| !! | TGAGGATTTGTTTACTTTTC+GGG | - | chr1_2:56105892-56105911 | Msa0078510:intron | 30.0% |
| ACTTTCTTTGTAATCATCAC+AGG | - | chr1_2:56105946-56105965 | Msa0078510:CDS | 30.0% | |
| !!! | AGCTCTTTTGACTTTATTGA+TGG | - | chr1_2:56106055-56106074 | Msa0078510:intron | 30.0% |
| !!! | GCTCTTTTGACTTTATTGAT+GGG | - | chr1_2:56106056-56106075 | Msa0078510:intron | 30.0% |
| ! | CTTTATTGATGGGTATGATA+CGG | - | chr1_2:56106066-56106085 | Msa0078510:intron | 30.0% |
| AAGGAAAATCAATTGGATGA+AGG | - | chr1_2:56106243-56106262 | Msa0078510:intron | 30.0% | |
| TCGATGTATTTATCAGTTTG+TGG | + | chr1_2:56106424-56106443 | None:intergenic | 30.0% | |
| GAACTATTATCTGAACATTC+TGG | + | chr1_2:56106706-56106725 | None:intergenic | 30.0% | |
| TTAGGTAATAGGATCAGAAA+AGG | + | chr1_2:56106756-56106775 | None:intergenic | 30.0% | |
| !! | CATAGCTTTGTTTAGGTAAT+AGG | + | chr1_2:56106767-56106786 | None:intergenic | 30.0% |
| !!! | TTTTTTTTACTTCAGGGAAC+CGG | - | chr1_2:56106800-56106819 | Msa0078510:intron | 30.0% |
| ! | ATCTTTTAGACCTGATTTAC+TGG | - | chr1_2:56107114-56107133 | Msa0078510:CDS | 30.0% |
| TGATTTACTGGTCATAAAGT+GGG | - | chr1_2:56107126-56107145 | Msa0078510:CDS | 30.0% | |
| GTCAAGATGAAATGTAGTTA+TGG | + | chr1_2:56107205-56107224 | None:intergenic | 30.0% | |
| CATTTATGTTAGGAACATCA+AGG | + | chr1_2:56107227-56107246 | None:intergenic | 30.0% | |
| CTGTTTCAAGCATTTATGTT+AGG | + | chr1_2:56107237-56107256 | None:intergenic | 30.0% | |
| CTAACATAAATGCTTGAAAC+AGG | - | chr1_2:56107235-56107254 | Msa0078510:intron | 30.0% | |
| GATAACTTATCTACATCATC+TGG | + | chr1_2:56107442-56107461 | None:intergenic | 30.0% | |
| TAAGATGTTTACACCTCTAT+AGG | - | chr1_2:56107607-56107626 | Msa0078510:CDS | 30.0% | |
| TTCATTATTCATGCCTATAG+AGG | + | chr1_2:56107623-56107642 | None:intergenic | 30.0% | |
| ! | GGATATCCTCATTTTAGATA+CGG | - | chr1_2:56107826-56107845 | Msa0078510:intron | 30.0% |
| ! | TAATGACCGTATCTAAAATG+AGG | + | chr1_2:56107835-56107854 | None:intergenic | 30.0% |
| ATTCATCAACTACGATTTAC+CGG | + | chr1_2:56107926-56107945 | None:intergenic | 30.0% | |
| AATGCAGTCTAAGTGAATAA+AGG | - | chr1_2:56108065-56108084 | Msa0078510:CDS | 30.0% | |
| AAAATGTAGTAGGCCATGTT+GGG | - | chr1_2:56103483-56103502 | Msa0078510:three_prime_UTR | 35.0% | |
| !! | AAGAGTGTGGTATTTTGTAG+TGG | + | chr1_2:56103528-56103547 | None:intergenic | 35.0% |
| TAACAATGATGAGAAGAGTG+TGG | + | chr1_2:56103541-56103560 | None:intergenic | 35.0% | |
| ACATAATCATGGCAACTATG+AGG | - | chr1_2:56103782-56103801 | Msa0078510:exon | 35.0% | |
| CATAATCATGGCAACTATGA+GGG | - | chr1_2:56103783-56103802 | Msa0078510:exon | 35.0% | |
| ATAATCATGGCAACTATGAG+GGG | - | chr1_2:56103784-56103803 | Msa0078510:exon | 35.0% | |
| ! | GAGTGAGAGTGGAAATTTTA+AGG | - | chr1_2:56103987-56104006 | Msa0078510:intron | 35.0% |
| ! | GTGAGAGTGGAAATTTTAAG+GGG | - | chr1_2:56103989-56104008 | Msa0078510:intron | 35.0% |
| TTTAAGGGGAAAATAGTGTG+TGG | - | chr1_2:56104003-56104022 | Msa0078510:intron | 35.0% | |
| AACAAACTTACAGCCAAAAC+AGG | + | chr1_2:56104114-56104133 | None:intergenic | 35.0% | |
| ! | TCCTTGTATTGATCATAACG+CGG | + | chr1_2:56104473-56104492 | None:intergenic | 35.0% |
| ATGATCAATACAAGGATGCA+TGG | - | chr1_2:56104477-56104496 | Msa0078510:intron | 35.0% | |
| TGATCAATACAAGGATGCAT+GGG | - | chr1_2:56104478-56104497 | Msa0078510:intron | 35.0% | |
| !! | TGTTTGTTGTAGCTCAAAGT+TGG | - | chr1_2:56104619-56104638 | Msa0078510:CDS | 35.0% |
| !! | CAACCTTTTCAAGGAAAAGT+GGG | + | chr1_2:56104714-56104733 | None:intergenic | 35.0% |
| !! | ACAACCTTTTCAAGGAAAAG+TGG | + | chr1_2:56104715-56104734 | None:intergenic | 35.0% |
| ! | CATTTGGAATATGAAAGGTG+TGG | - | chr1_2:56104835-56104854 | Msa0078510:intron | 35.0% |
| ! | TTTGGAATATGAAAGGTGTG+GGG | - | chr1_2:56104837-56104856 | Msa0078510:intron | 35.0% |
| AAACTCTATGGTCCTAAAAC+TGG | - | chr1_2:56104873-56104892 | Msa0078510:intron | 35.0% | |
| !! | TAGATTCAGCTTGTTATGTC+AGG | - | chr1_2:56104920-56104939 | Msa0078510:CDS | 35.0% |
| !!! | TGTGTATTTTGGTTCCACTT+TGG | - | chr1_2:56104996-56105015 | Msa0078510:CDS | 35.0% |
| GCTATAATCACGATTTGTGA+AGG | + | chr1_2:56105284-56105303 | None:intergenic | 35.0% | |
| GCCAATAATAAGTGAATGAC+TGG | - | chr1_2:56105302-56105321 | Msa0078510:CDS | 35.0% | |
| CCCAGTCATTCACTTATTAT+TGG | + | chr1_2:56105306-56105325 | None:intergenic | 35.0% | |
| GACTTCTACTCAATTGTTTG+AGG | + | chr1_2:56105410-56105429 | None:intergenic | 35.0% | |
| CAATGTGGTTAACAACTTTC+AGG | - | chr1_2:56105607-56105626 | Msa0078510:CDS | 35.0% | |
| ! | CTGTTTAAGTTCAAAACCCT+TGG | + | chr1_2:56105647-56105666 | None:intergenic | 35.0% |
| AACAGCAGCAAATATTTCTC+AGG | - | chr1_2:56105662-56105681 | Msa0078510:intron | 35.0% | |
| !!! | ACTTTTTTATGTCTTCTCGC+AGG | - | chr1_2:56105768-56105787 | Msa0078510:CDS | 35.0% |
| AATCAATGTACAAGTCTAGG+GGG | - | chr1_2:56105850-56105869 | Msa0078510:intron | 35.0% | |
| TTTACAAAAACGCAAAGGTG+AGG | - | chr1_2:56105874-56105893 | Msa0078510:intron | 35.0% | |
| AAAGAGCTTCTGAATTCATC+AGG | + | chr1_2:56106043-56106062 | None:intergenic | 35.0% | |
| ! | GTTCTAATGTGATTTGTAGG+AGG | + | chr1_2:56106096-56106115 | None:intergenic | 35.0% |
| TATCATACCTGAAAAGGCAA+TGG | + | chr1_2:56106148-56106167 | None:intergenic | 35.0% | |
| !!! | TTGCCTTTTCAGGTATGATA+CGG | - | chr1_2:56106148-56106167 | Msa0078510:intron | 35.0% |
| TAACCGTATCATACCTGAAA+AGG | + | chr1_2:56106154-56106173 | None:intergenic | 35.0% | |
| TGAAGGGAAGGAAAATCAAT+TGG | - | chr1_2:56106236-56106255 | Msa0078510:intron | 35.0% | |
| AAAATCAATTGGATGAAGGC+TGG | - | chr1_2:56106247-56106266 | Msa0078510:intron | 35.0% | |
| GACAATATCATTCGTTCAAC+TGG | - | chr1_2:56106355-56106374 | Msa0078510:intron | 35.0% | |
| ATGAGGAATCCACATTAAAC+AGG | + | chr1_2:56106483-56106502 | None:intergenic | 35.0% | |
| !! | ATGACAGTTTTGATGAGCAT+GGG | + | chr1_2:56106525-56106544 | None:intergenic | 35.0% |
| !! | AATGACAGTTTTGATGAGCA+TGG | + | chr1_2:56106526-56106545 | None:intergenic | 35.0% |
| ATCCCTTTGATAGGATTCAT+TGG | - | chr1_2:56106620-56106639 | Msa0078510:intron | 35.0% | |
| TGCCAATGAATCCTATCAAA+GGG | + | chr1_2:56106625-56106644 | None:intergenic | 35.0% | |
| !! | CAATTATTTTGTGAGCCAAG+GGG | + | chr1_2:56106907-56106926 | None:intergenic | 35.0% |
| !! | GCAATTATTTTGTGAGCCAA+GGG | + | chr1_2:56106908-56106927 | None:intergenic | 35.0% |
| !! | AGCAATTATTTTGTGAGCCA+AGG | + | chr1_2:56106909-56106928 | None:intergenic | 35.0% |
| TTGGCTCACAAAATAATTGC+TGG | - | chr1_2:56106908-56106927 | Msa0078510:CDS | 35.0% | |
| TGTAATTGAACTAGACCACA+AGG | + | chr1_2:56106968-56106987 | None:intergenic | 35.0% | |
| ! | AATCACTCAGTATGATTTGC+AGG | + | chr1_2:56107052-56107071 | None:intergenic | 35.0% |
| CACTTTATGACCAGTAAATC+AGG | + | chr1_2:56107127-56107146 | None:intergenic | 35.0% | |
| CTGATTTACTGGTCATAAAG+TGG | - | chr1_2:56107125-56107144 | Msa0078510:CDS | 35.0% | |
| !!! | TGATGTTTTGATTGTGTGAC+TGG | - | chr1_2:56107165-56107184 | Msa0078510:intron | 35.0% |
| !! | TTGGGTACCATAGGTTTTAA+GGG | + | chr1_2:56107482-56107501 | None:intergenic | 35.0% |
| AAAGTTTGATACAGCAACAG+CGG | + | chr1_2:56107568-56107587 | None:intergenic | 35.0% | |
| CAGTTCAGCTAATCATCAAT+GGG | - | chr1_2:56107661-56107680 | Msa0078510:CDS | 35.0% | |
| AATGGGTGATTTCTAATGCA+GGG | - | chr1_2:56107678-56107697 | Msa0078510:CDS | 35.0% | |
| ! | TGATGAATGAGTTCTAACGA+AGG | - | chr1_2:56107938-56107957 | Msa0078510:intron | 35.0% |
| AGTTCCAAGGTACAATGATT+AGG | + | chr1_2:56107966-56107985 | None:intergenic | 35.0% | |
| AGTGAATAAAGGTCTATTCC+AGG | - | chr1_2:56108076-56108095 | Msa0078510:CDS | 35.0% | |
| TCCACGTGTCAAAATGTAGT+AGG | - | chr1_2:56103473-56103492 | Msa0078510:three_prime_UTR | 40.0% | |
| CAAAATGTAGTAGGCCATGT+TGG | - | chr1_2:56103482-56103501 | Msa0078510:three_prime_UTR | 40.0% | |
| ! | AAGAAGAGTGTAACCCAACA+TGG | + | chr1_2:56103499-56103518 | None:intergenic | 40.0% |
| CTCTTCTCATCATTGTTAGC+AGG | - | chr1_2:56103543-56103562 | Msa0078510:three_prime_UTR | 40.0% | |
| CAGATGAATCGAAACGACAA+GGG | + | chr1_2:56103669-56103688 | None:intergenic | 40.0% | |
| ! | CTTTTCTTCCCTGGAAATTG+AGG | + | chr1_2:56103828-56103847 | None:intergenic | 40.0% |
| AACCAGGCCTTTACTTATGT+TGG | - | chr1_2:56103889-56103908 | Msa0078510:CDS | 40.0% | |
| AACCAACATAAGTAAAGGCC+TGG | + | chr1_2:56103894-56103913 | None:intergenic | 40.0% | |
| ! | AGTGTGTGGTGGAATGAATT+TGG | - | chr1_2:56104017-56104036 | Msa0078510:intron | 40.0% |
| ! | GTTTTTGTTGGAGCTGAAGT+TGG | - | chr1_2:56104039-56104058 | Msa0078510:intron | 40.0% |
| AAACTTACAGCCAAAACAGG+TGG | + | chr1_2:56104111-56104130 | None:intergenic | 40.0% | |
| GTGAATACATGCATGGACAT+CGG | - | chr1_2:56104259-56104278 | Msa0078510:intron | 40.0% | |
| ACCGCGTTATGATCAATACA+AGG | - | chr1_2:56104469-56104488 | Msa0078510:intron | 40.0% | |
| !! | TCACCCACTTTTCCTTGAAA+AGG | - | chr1_2:56104708-56104727 | Msa0078510:CDS | 40.0% |
| ! | TTGGAATATGAAAGGTGTGG+GGG | - | chr1_2:56104838-56104857 | Msa0078510:intron | 40.0% |
| AAGACCGAGTCAAAACTCTA+TGG | - | chr1_2:56104861-56104880 | Msa0078510:intron | 40.0% | |
| !!! | AGGACCATAGAGTTTTGACT+CGG | + | chr1_2:56104868-56104887 | None:intergenic | 40.0% |
| !!! | GTATTTTGGTTCCACTTTGG+AGG | - | chr1_2:56104999-56105018 | Msa0078510:CDS | 40.0% |
| TCAGTTTGAATCCTCCAAAG+TGG | + | chr1_2:56105013-56105032 | None:intergenic | 40.0% | |
| !! | GAGCTTTGAGTTTGGTTATG+CGG | + | chr1_2:56105245-56105264 | None:intergenic | 40.0% |
| ! | GTGATAGTGATTCAGATGAC+AGG | + | chr1_2:56105344-56105363 | None:intergenic | 40.0% |
| TAGTCTTCGTTGCCAATGAT+TGG | - | chr1_2:56105799-56105818 | Msa0078510:CDS | 40.0% | |
| TATTCATAACATCGCCTACC+AGG | - | chr1_2:56105979-56105998 | Msa0078510:intron | 40.0% | |
| ATTCATAACATCGCCTACCA+GGG | - | chr1_2:56105980-56105999 | Msa0078510:intron | 40.0% | |
| ! | TCAGTTACCATTGCCTTTTC+AGG | - | chr1_2:56106138-56106157 | Msa0078510:intron | 40.0% |
| !! | ATGCACTCGCGATTTTTAGA+AGG | + | chr1_2:56106178-56106197 | None:intergenic | 40.0% |
| CAGGTGTAGTATACCTGAAA+AGG | + | chr1_2:56106216-56106235 | None:intergenic | 40.0% | |
| AGGTATACTACACCTGTGAA+GGG | - | chr1_2:56106220-56106239 | Msa0078510:intron | 40.0% | |
| ! | TTGATTTTCCTTCCCTTCAC+AGG | + | chr1_2:56106235-56106254 | None:intergenic | 40.0% |
| TGTAAGTCCACATTATGCCA+AGG | - | chr1_2:56106297-56106316 | Msa0078510:intron | 40.0% | |
| ACAAGTTCCTTGGCATAATG+TGG | + | chr1_2:56106307-56106326 | None:intergenic | 40.0% | |
| ! | TATGCCAAGGAACTTGTTTC+CGG | - | chr1_2:56106310-56106329 | Msa0078510:intron | 40.0% |
| ATTCGTTCAACTGGTATCAC+TGG | - | chr1_2:56106364-56106383 | Msa0078510:intron | 40.0% | |
| TAGCACCTTCCTGTTTAATG+TGG | - | chr1_2:56106471-56106490 | Msa0078510:intron | 40.0% | |
| GGAATCCACATTAAACAGGA+AGG | + | chr1_2:56106479-56106498 | None:intergenic | 40.0% | |
| TGTGGATTCCTCATTTGACA+TGG | - | chr1_2:56106489-56106508 | Msa0078510:intron | 40.0% | |
| TCAATGGTCCATGTCAAATG+AGG | + | chr1_2:56106500-56106519 | None:intergenic | 40.0% | |
| TTGATGAGCATGGGTTTCAA+TGG | + | chr1_2:56106516-56106535 | None:intergenic | 40.0% | |
| AAAGGGATACTCTTGTCAAC+AGG | + | chr1_2:56106608-56106627 | None:intergenic | 40.0% | |
| !! | GACAAGAGTATCCCTTTGAT+AGG | - | chr1_2:56106611-56106630 | Msa0078510:intron | 40.0% |
| CTGCCAATGAATCCTATCAA+AGG | + | chr1_2:56106626-56106645 | None:intergenic | 40.0% | |
| CTTTGATAGGATTCATTGGC+AGG | - | chr1_2:56106624-56106643 | Msa0078510:intron | 40.0% | |
| ! | CTTCTCCATGATCTTTTTGC+CGG | + | chr1_2:56106822-56106841 | None:intergenic | 40.0% |
| ATCGGGGTAGCAAAATTCAA+TGG | - | chr1_2:56106881-56106900 | Msa0078510:intron | 40.0% | |
| CACAAGGCTCAAATCTACTT+GGG | + | chr1_2:56106952-56106971 | None:intergenic | 40.0% | |
| CAATTACATGCCATGCCATA+TGG | - | chr1_2:56106980-56106999 | Msa0078510:intron | 40.0% | |
| ATAAGCTCTACCGTTCCATA+TGG | + | chr1_2:56106998-56107017 | None:intergenic | 40.0% | |
| TCACACCGAGTGATCTAAAT+TGG | - | chr1_2:56107075-56107094 | Msa0078510:intron | 40.0% | |
| ACCGAGTGATCTAAATTGGA+TGG | - | chr1_2:56107079-56107098 | Msa0078510:intron | 40.0% | |
| GCCATCCAATTTAGATCACT+CGG | + | chr1_2:56107083-56107102 | None:intergenic | 40.0% | |
| CTTGTTGACACTGTGAAAGA+AGG | - | chr1_2:56107284-56107303 | Msa0078510:intron | 40.0% | |
| ACTGTGAAAGAAGGCTATAC+AGG | - | chr1_2:56107293-56107312 | Msa0078510:intron | 40.0% | |
| AACGTGGAGGTAAGAAGATA+TGG | - | chr1_2:56107335-56107354 | Msa0078510:intron | 40.0% | |
| ! | CTTGGGTACCATAGGTTTTA+AGG | + | chr1_2:56107483-56107502 | None:intergenic | 40.0% |
| GATTATCTCTTGCATGGCTT+GGG | + | chr1_2:56107500-56107519 | None:intergenic | 40.0% | |
| ! | GTTCTGGATTATCTCTTGCA+TGG | + | chr1_2:56107506-56107525 | None:intergenic | 40.0% |
| AGAGATAATCCAGAACTGCA+TGG | - | chr1_2:56107510-56107529 | Msa0078510:CDS | 40.0% | |
| GCAGTTCAGCTAATCATCAA+TGG | - | chr1_2:56107660-56107679 | Msa0078510:CDS | 40.0% | |
| CAATGGGTGATTTCTAATGC+AGG | - | chr1_2:56107677-56107696 | Msa0078510:CDS | 40.0% | |
| GATATCCCTATTGATGCTCA+TGG | + | chr1_2:56107813-56107832 | None:intergenic | 40.0% | |
| GCAGAGTGCAGTAAGATTAT+AGG | - | chr1_2:56107888-56107907 | Msa0078510:intron | 40.0% | |
| GGAACCTAATCATTGTACCT+TGG | - | chr1_2:56107959-56107978 | Msa0078510:intron | 40.0% | |
| GTACCTTGGAACTTAGTTGA+AGG | - | chr1_2:56107973-56107992 | Msa0078510:intron | 40.0% | |
| !! | GCCTACTACATTTTGACACG+TGG | + | chr1_2:56103477-56103496 | None:intergenic | 45.0% |
| GCAGATGAATCGAAACGACA+AGG | + | chr1_2:56103670-56103689 | None:intergenic | 45.0% | |
| AACTATGAGGGGTTCTTCTG+TGG | - | chr1_2:56103795-56103814 | Msa0078510:exon | 45.0% | |
| ACTATGAGGGGTTCTTCTGT+GGG | - | chr1_2:56103796-56103815 | Msa0078510:exon | 45.0% | |
| !! | TAGTCTCTGCTTTTCTTCCC+TGG | + | chr1_2:56103837-56103856 | None:intergenic | 45.0% |
| ATGAGTGAGAAGAGTGAGAG+TGG | - | chr1_2:56103976-56103995 | Msa0078510:intron | 45.0% | |
| AAGGGGAAAATAGTGTGTGG+TGG | - | chr1_2:56104006-56104025 | Msa0078510:intron | 45.0% | |
| ACTGTAATCACGCGTGTTTG+TGG | - | chr1_2:56104300-56104319 | Msa0078510:CDS | 45.0% | |
| GCGGTGATACAGTCATAACA+CGG | + | chr1_2:56104454-56104473 | None:intergenic | 45.0% | |
| TTCTTTCACTGCCACAAGAG+AGG | - | chr1_2:56104664-56104683 | Msa0078510:CDS | 45.0% | |
| !! | AGGAGTTGATCGCGTTTTTG+TGG | - | chr1_2:56104684-56104703 | Msa0078510:CDS | 45.0% |
| TTTCTCAGGACCATATGGTG+TGG | - | chr1_2:56105676-56105695 | Msa0078510:intron | 45.0% | |
| AAGAGCAGTGTGCCAATCAT+TGG | + | chr1_2:56105814-56105833 | None:intergenic | 45.0% | |
| GGGGCTTTACAAAAACGCAA+AGG | - | chr1_2:56105869-56105888 | Msa0078510:intron | 45.0% | |
| GAGAAGAGCGAAGTCTGAAA+AGG | + | chr1_2:56106014-56106033 | None:intergenic | 45.0% | |
| CAGGTATACTACACCTGTGA+AGG | - | chr1_2:56106219-56106238 | Msa0078510:intron | 45.0% | |
| ATACTACACCTGTGAAGGGA+AGG | - | chr1_2:56106224-56106243 | Msa0078510:intron | 45.0% | |
| ACTTACAGTGAACACTCGGT+CGG | + | chr1_2:56106284-56106303 | None:intergenic | 45.0% | |
| GTGGACTTACAGTGAACACT+CGG | + | chr1_2:56106288-56106307 | None:intergenic | 45.0% | |
| TTCTCCGGAAACAAGTTCCT+TGG | + | chr1_2:56106317-56106336 | None:intergenic | 45.0% | |
| ! | AGAACACAGAGGTGTGGAAT+TGG | - | chr1_2:56106333-56106352 | Msa0078510:intron | 45.0% |
| GGTATCACTGGTATCGTGAA+TGG | - | chr1_2:56106376-56106395 | Msa0078510:intron | 45.0% | |
| ATGGCATGGATAATCGTGAG+TGG | - | chr1_2:56106395-56106414 | Msa0078510:intron | 45.0% | |
| GAAAGAAGCTCTTCAAGCTG+AGG | - | chr1_2:56106574-56106593 | Msa0078510:intron | 45.0% | |
| ACATATCCTGGCAAGGCAAT+CGG | - | chr1_2:56106863-56106882 | Msa0078510:intron | 45.0% | |
| AGCAAAATTCAATGGCCCCT+TGG | - | chr1_2:56106889-56106908 | Msa0078510:CDS | 45.0% | |
| CCACAAGGCTCAAATCTACT+TGG | + | chr1_2:56106953-56106972 | None:intergenic | 45.0% | |
| CCAAGTAGATTTGAGCCTTG+TGG | - | chr1_2:56106950-56106969 | Msa0078510:CDS | 45.0% | |
| ACATGCCATGCCATATGGAA+CGG | - | chr1_2:56106985-56107004 | Msa0078510:intron | 45.0% | |
| !! | CCACCAGTTGATGAAACGAT+GGG | + | chr1_2:56107263-56107282 | None:intergenic | 45.0% |
| !! | ACCACCAGTTGATGAAACGA+TGG | + | chr1_2:56107264-56107283 | None:intergenic | 45.0% |
| ACGAGAGCCCTTAAAACCTA+TGG | - | chr1_2:56107472-56107491 | Msa0078510:intron | 45.0% | |
| GGATTATCTCTTGCATGGCT+TGG | + | chr1_2:56107501-56107520 | None:intergenic | 45.0% | |
| AATCTTGAGCCATGCAGTTC+TGG | + | chr1_2:56107522-56107541 | None:intergenic | 45.0% | |
| ! | GCATGGCTCAAGATTTTTCG+TGG | - | chr1_2:56107527-56107546 | Msa0078510:CDS | 45.0% |
| ! | GGCTCAAGATTTTTCGTGGA+AGG | - | chr1_2:56107531-56107550 | Msa0078510:CDS | 45.0% |
| ATCTCCTCTCCATCTATTCC+AGG | + | chr1_2:56107759-56107778 | None:intergenic | 45.0% | |
| TCCACTGGCAAAGGAAAATG+TGG | - | chr1_2:56107782-56107801 | Msa0078510:CDS | 45.0% | |
| CCACTCCATGAGCATCAATA+GGG | - | chr1_2:56107805-56107824 | Msa0078510:CDS | 45.0% | |
| !! | AACTACGATTTACCGGCTTG+AGG | + | chr1_2:56107919-56107938 | None:intergenic | 45.0% |
| GGACCTTCAACTAAGTTCCA+AGG | + | chr1_2:56107979-56107998 | None:intergenic | 45.0% | |
| !! | CAAAAAAAAAAAAAAAAAAA+AGG | - | chr1_2:56108117-56108136 | Msa0078510:five_prime_UTR | 5.0% |
| TGTTAGCAGGTACACTCTCC+AGG | - | chr1_2:56103556-56103575 | Msa0078510:three_prime_UTR | 50.0% | |
| TGATTACTCACCAGTGCTCC+TGG | + | chr1_2:56103577-56103596 | None:intergenic | 50.0% | |
| CGACAAGGGTTGAATCTCAG+TGG | + | chr1_2:56103655-56103674 | None:intergenic | 50.0% | |
| GGTGCATGCCTCAATTTCCA+GGG | - | chr1_2:56103817-56103836 | Msa0078510:CDS | 50.0% | |
| TTGGAGCTGAAGTTGGACCT+TGG | - | chr1_2:56104046-56104065 | Msa0078510:intron | 50.0% | |
| GTTGGACCTTGGAGTAAGAC+TGG | - | chr1_2:56104057-56104076 | Msa0078510:intron | 50.0% | |
| AGTCCACCAGTCTTACTCCA+AGG | + | chr1_2:56104066-56104085 | None:intergenic | 50.0% | |
| !! | TGGAGTAAGACTGGTGGACT+TGG | - | chr1_2:56104066-56104085 | Msa0078510:CDS | 50.0% |
| !! | GGTGGACTTGGTGATGTTCT+TGG | - | chr1_2:56104078-56104097 | Msa0078510:CDS | 50.0% |
| !! | GGACTTGGTGATGTTCTTGG+TGG | - | chr1_2:56104081-56104100 | Msa0078510:CDS | 50.0% |
| !!! | TGGTGGACTTCCACCTGTTT+TGG | - | chr1_2:56104098-56104117 | Msa0078510:CDS | 50.0% |
| GGATACTGATGTGTCTGTCG+AGG | - | chr1_2:56104499-56104518 | Msa0078510:intron | 50.0% | |
| CAACTTTCAGGCTGCACTTG+AGG | - | chr1_2:56105619-56105638 | Msa0078510:CDS | 50.0% | |
| GACTAGAGAGCCACACCATA+TGG | + | chr1_2:56105689-56105708 | None:intergenic | 50.0% | |
| CTTGTTTCCGGAGAACACAG+AGG | - | chr1_2:56106322-56106341 | Msa0078510:intron | 50.0% | |
| TTCCACACCTCTGTGTTCTC+CGG | + | chr1_2:56106332-56106351 | None:intergenic | 50.0% | |
| CACTGGTATCGTGAATGGCA+TGG | - | chr1_2:56106381-56106400 | Msa0078510:intron | 50.0% | |
| GAAGCTCTTCAAGCTGAGGT+TGG | - | chr1_2:56106578-56106597 | Msa0078510:intron | 50.0% | |
| GGGAACCGGCAAAAAGATCA+TGG | - | chr1_2:56106814-56106833 | Msa0078510:intron | 50.0% | |
| GGAGAAGCAAATTGAGCAGC+TGG | - | chr1_2:56106835-56106854 | Msa0078510:intron | 50.0% | |
| GAAGCAAATTGAGCAGCTGG+AGG | - | chr1_2:56106838-56106857 | Msa0078510:intron | 50.0% | |
| CAGCTGGAGGTAACATATCC+TGG | - | chr1_2:56106851-56106870 | Msa0078510:intron | 50.0% | |
| GGAGGTAACATATCCTGGCA+AGG | - | chr1_2:56106856-56106875 | Msa0078510:intron | 50.0% | |
| CATATCCTGGCAAGGCAATC+GGG | - | chr1_2:56106864-56106883 | Msa0078510:intron | 50.0% | |
| ATATCCTGGCAAGGCAATCG+GGG | - | chr1_2:56106865-56106884 | Msa0078510:intron | 50.0% | |
| CTCTACCGTTCCATATGGCA+TGG | + | chr1_2:56106993-56107012 | None:intergenic | 50.0% | |
| GTGCCCATCGTTTCATCAAC+TGG | - | chr1_2:56107257-56107276 | Msa0078510:intron | 50.0% | |
| CCCATCGTTTCATCAACTGG+TGG | - | chr1_2:56107260-56107279 | Msa0078510:intron | 50.0% | |
| !!! | GGTTTTAAGGGCTCTCGTGA+CGG | + | chr1_2:56107470-56107489 | None:intergenic | 50.0% |
| ! | TTGCATGGCTTGGGTACCAT+AGG | + | chr1_2:56107491-56107510 | None:intergenic | 50.0% |
| CAGTGCGTTCTCCCATAGTT+TGG | + | chr1_2:56107709-56107728 | None:intergenic | 50.0% | |
| GGCAACGAACCTGGAATAGA+TGG | - | chr1_2:56107747-56107766 | Msa0078510:CDS | 50.0% | |
| CGAACCTGGAATAGATGGAG+AGG | - | chr1_2:56107752-56107771 | Msa0078510:CDS | 50.0% | |
| ! | GCCACATTTTCCTTTGCCAG+TGG | + | chr1_2:56107786-56107805 | None:intergenic | 50.0% |
| GCCACTCCATGAGCATCAAT+AGG | - | chr1_2:56107804-56107823 | Msa0078510:CDS | 50.0% | |
| CCCTATTGATGCTCATGGAG+TGG | + | chr1_2:56107808-56107827 | None:intergenic | 50.0% | |
| TTATAGGCGTAGCCTCAAGC+CGG | - | chr1_2:56107904-56107923 | Msa0078510:intron | 50.0% | |
| GGGTGCATGCCTCAATTTCC+AGG | - | chr1_2:56103816-56103835 | Msa0078510:CDS | 55.0% | |
| CTCTCAACAAGCTGCACGTG+CGG | - | chr1_2:56103920-56103939 | Msa0078510:intron | 55.0% | |
| AGAAGACGAAGCAGCACGTG+CGG | + | chr1_2:56103950-56103969 | None:intergenic | 55.0% | |
| GGACCTTGGAGTAAGACTGG+TGG | - | chr1_2:56104060-56104079 | Msa0078510:CDS | 55.0% | |
| CGCGATCAACTCCTCTCTTG+TGG | + | chr1_2:56104678-56104697 | None:intergenic | 55.0% | |
| ! | AAAGGCGTGTCTTCCCTGGT+AGG | + | chr1_2:56105996-56106015 | None:intergenic | 55.0% |
| ! | CTGAAAAGGCGTGTCTTCCC+TGG | + | chr1_2:56106000-56106019 | None:intergenic | 55.0% |
| TTCCGGAGAACACAGAGGTG+TGG | - | chr1_2:56106327-56106346 | Msa0078510:intron | 55.0% | |
| GGCAGGCTAGAAGAGCAGAA+AGG | - | chr1_2:56106641-56106660 | Msa0078510:intron | 55.0% | |
| GGCTATACAGGATTCCACGC+TGG | - | chr1_2:56107305-56107324 | Msa0078510:intron | 55.0% | |
| TGCAGGGACCAGCCAAACTA+TGG | - | chr1_2:56107694-56107713 | Msa0078510:CDS | 55.0% | |
| GCAGGGACCAGCCAAACTAT+GGG | - | chr1_2:56107695-56107714 | Msa0078510:CDS | 55.0% | |
| GCGTTCTCCCATAGTTTGGC+TGG | + | chr1_2:56107705-56107724 | None:intergenic | 55.0% | |
| TGGAGAGGAGATTGCTCCAC+TGG | - | chr1_2:56107767-56107786 | Msa0078510:CDS | 55.0% | |
| GGAGATTGCTCCACTGGCAA+AGG | - | chr1_2:56107773-56107792 | Msa0078510:CDS | 55.0% | |
| ! | GGTACACTCTCCAGGAGCAC+TGG | - | chr1_2:56103564-56103583 | Msa0078510:three_prime_UTR | 60.0% |
| ! | AGGCTGCACTTGAGGCACCA+AGG | - | chr1_2:56105627-56105646 | Msa0078510:intron | 60.0% |
| ! | GGCTGCACTTGAGGCACCAA+GGG | - | chr1_2:56105628-56105647 | Msa0078510:intron | 60.0% |
| GAACGCACTGTTGAGCCTCG+AGG | - | chr1_2:56107719-56107738 | Msa0078510:CDS | 60.0% | |
| GCTACCCCGATTGCCTTGCC+AGG | + | chr1_2:56106872-56106891 | None:intergenic | 65.0% | |
| CCACGTTGAACGCTCCAGCG+TGG | + | chr1_2:56107322-56107341 | None:intergenic | 65.0% | |
| ! | CCACGCTGGAGCGTTCAACG+TGG | - | chr1_2:56107319-56107338 | Msa0078510:intron | 65.0% |
| ! | CGCTGGAGCGTTCAACGTGG+AGG | - | chr1_2:56107322-56107341 | Msa0078510:intron | 65.0% |
| CTGTTGAGCCTCGAGGTCGC+AGG | - | chr1_2:56107726-56107745 | Msa0078510:CDS | 65.0% | |
| GTTCGTTGCCTGCGACCTCG+AGG | + | chr1_2:56107737-56107756 | None:intergenic | 65.0% | |
| GAGGTCGCAGGCAACGAACC+TGG | - | chr1_2:56107738-56107757 | Msa0078510:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 56103439 | 56108173 | 56103439 | ID=Msa0078510;Name=Msa0078510 |
| chr1_2 | mRNA | 56103439 | 56108173 | 56103439 | ID=Msa0078510-mRNA-1;Parent=Msa0078510;Name=Msa0078510-mRNA-1;_AED=0.07;_eAED=0.07;_QI=59|1|1|1|1|1|14|358|643 |
| chr1_2 | exon | 56103439 | 56103913 | 56103439 | ID=Msa0078510-mRNA-1:exon:17506;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56104060 | 56104188 | 56104060 | ID=Msa0078510-mRNA-1:exon:17505;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56104269 | 56104355 | 56104269 | ID=Msa0078510-mRNA-1:exon:17504;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56104606 | 56104797 | 56104606 | ID=Msa0078510-mRNA-1:exon:17503;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56104885 | 56105061 | 56104885 | ID=Msa0078510-mRNA-1:exon:17502;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56105147 | 56105390 | 56105147 | ID=Msa0078510-mRNA-1:exon:17501;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56105535 | 56105644 | 56105535 | ID=Msa0078510-mRNA-1:exon:17500;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56105722 | 56105822 | 56105722 | ID=Msa0078510-mRNA-1:exon:17499;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56105920 | 56105983 | 56105920 | ID=Msa0078510-mRNA-1:exon:17498;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56106671 | 56106760 | 56106671 | ID=Msa0078510-mRNA-1:exon:17497;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56106883 | 56106981 | 56106883 | ID=Msa0078510-mRNA-1:exon:17496;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56107092 | 56107172 | 56107092 | ID=Msa0078510-mRNA-1:exon:17495;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56107490 | 56107842 | 56107490 | ID=Msa0078510-mRNA-1:exon:17494;Parent=Msa0078510-mRNA-1 |
| chr1_2 | exon | 56108027 | 56108173 | 56108027 | ID=Msa0078510-mRNA-1:exon:17493;Parent=Msa0078510-mRNA-1 |
| chr1_2 | five_prime_UTR | 56108115 | 56108173 | 56108115 | ID=Msa0078510-mRNA-1:five_prime_utr;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56108027 | 56108114 | 56108027 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56107490 | 56107842 | 56107490 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56107092 | 56107172 | 56107092 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56106883 | 56106981 | 56106883 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56106671 | 56106760 | 56106671 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56105920 | 56105983 | 56105920 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56105722 | 56105822 | 56105722 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56105535 | 56105644 | 56105535 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56105147 | 56105390 | 56105147 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56104885 | 56105061 | 56104885 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56104606 | 56104797 | 56104606 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56104269 | 56104355 | 56104269 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56104060 | 56104188 | 56104060 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | CDS | 56103797 | 56103913 | 56103797 | ID=Msa0078510-mRNA-1:cds;Parent=Msa0078510-mRNA-1 |
| chr1_2 | three_prime_UTR | 56103439 | 56103796 | 56103439 | ID=Msa0078510-mRNA-1:three_prime_utr;Parent=Msa0078510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
