AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0369360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0369360 MtrunA17_Chr3g0113631 94.490 1089 52 2 1 1089 1 1081 0.0 1995
Msa0369360 MtrunA17_Chr3g0105051 38.441 1142 588 32 1 1089 1 1080 0.0 631
Msa0369360 MtrunA17_Chr5g0430201 39.200 1125 578 31 1 1073 1 1071 0.0 620
Msa0369360 MtrunA17_Chr7g0235711 94.619 223 12 0 614 836 11 233 7.91e-147 439
Msa0369360 MtrunA17_Chr4g0073021 28.459 1142 596 43 1 1061 1 1002 4.66e-95 326
Msa0369360 MtrunA17_Chr7g0235721 60.465 258 33 4 288 544 76 265 3.52e-83 273
Msa0369360 MtrunA17_Chr7g0235721 85.075 67 10 0 25 91 9 75 5.58e-18 86.3
Msa0369360 MtrunA17_Chr2g0298801 33.178 428 213 14 1 384 1 399 2.23e-39 159
Msa0369360 MtrunA17_Chr1g0197121 28.302 530 301 21 10 508 11 492 7.19e-37 150
Msa0369360 MtrunA17_Chr1g0177421 29.787 423 214 16 1 383 1 380 1.04e-35 146
Msa0369360 MtrunA17_Chr1g0177421 30.636 173 102 4 694 850 561 731 1.82e-12 71.6
Msa0369360 MtrunA17_Chr4g0071701 42.012 169 84 4 9 174 9 166 1.30e-24 111
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0369360 AT2G29970.1 38.182 1100 537 37 1 1075 1 982 0.0 600
Msa0369360 AT1G07200.2 36.014 1119 539 34 1 1086 1 975 0.0 566
Msa0369360 AT2G40130.1 48.218 477 203 13 1 465 1 445 1.05e-122 399
Msa0369360 AT2G40130.1 35.076 459 231 11 623 1071 486 887 1.61e-70 254
Msa0369360 AT2G40130.2 48.218 477 203 13 1 465 1 445 1.54e-122 398
Msa0369360 AT2G40130.2 35.076 459 231 11 623 1071 489 890 2.13e-70 254
Msa0369360 AT1G07200.1 32.285 477 238 16 620 1086 17 418 6.09e-54 195
Msa0369360 AT5G57710.1 34.059 505 241 21 1 464 1 454 2.71e-51 197
Msa0369360 AT5G57710.1 26.720 378 232 8 696 1061 610 954 3.11e-34 142
Msa0369360 AT4G30350.1 34.286 420 209 15 1 384 1 389 3.23e-38 155
Msa0369360 AT4G30350.1 26.720 378 226 12 696 1070 571 900 3.11e-33 139
Msa0369360 AT3G52490.1 31.527 406 201 17 7 382 7 365 3.98e-38 154
Msa0369360 AT3G52490.1 28.902 173 110 4 691 850 570 742 3.24e-13 74.7
Msa0369360 AT4G29920.1 42.935 184 88 4 1 177 1 174 2.68e-27 120
Msa0369360 AT4G29920.2 42.935 184 88 4 1 177 1 174 2.88e-27 120
Msa0369360 AT5G57130.1 28.059 474 245 17 1 384 1 468 5.62e-27 119

Find 248 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAGTTACTTGAAATTTC+TGG 0.131871 3_1:+66492779 Msa0369360:CDS
TTGTCTGCATCAAACTATTT+TGG 0.192047 3_1:-66494979 None:intergenic
TGATTGTTGTCTTCTCTATT+TGG 0.200062 3_1:+66495699 Msa0369360:three_prime_UTR
TAGCCGTATCTGCGAGTAAA+TGG 0.216279 3_1:-66495195 None:intergenic
GAAGGTGTTGTTGAGGAATT+AGG 0.220172 3_1:+66492699 Msa0369360:CDS
ACTGCATCCATTCATTTCTT+TGG 0.222711 3_1:-66494744 None:intergenic
CGGGTGTTATAGTGAGTTTC+GGG 0.223817 3_1:+66492637 Msa0369360:CDS
TACTCGCAGATACGGCTAAA+AGG 0.266878 3_1:+66495200 Msa0369360:CDS
AATAACTTCAACAAAATTCT+TGG 0.287837 3_1:+66495433 Msa0369360:CDS
AAGCTTGAAGTAAATCGATT+AGG 0.295089 3_1:-66494383 None:intergenic
TTTCCTCATGATAATCAATA+TGG 0.295994 3_1:+66493534 Msa0369360:CDS
GAGCAGCCACGCCGGGGAGC+TGG 0.304241 3_1:+66492297 Msa0369360:CDS
ACCGGTTTCGAATTCGCTTA+TGG 0.305716 3_1:+66491999 Msa0369360:CDS
AGCTTGAAGTAAATCGATTA+GGG 0.309570 3_1:-66494382 None:intergenic
TGGAACATATCAGTTAGATT+TGG 0.312456 3_1:-66494161 None:intergenic
ATGAGAATTTCCGGAGAATT+GGG 0.315277 3_1:+66492382 Msa0369360:CDS
GACCAAAGACGATGGTGTTT+TGG 0.315865 3_1:+66493851 Msa0369360:intron
TTTAAAGCTTGGATTGCTTC+TGG 0.320278 3_1:-66491745 None:intergenic
GATGAGAATTTCCGGAGAAT+TGG 0.321061 3_1:+66492381 Msa0369360:CDS
AAGATGTAGATGAGAATTTC+CGG 0.322052 3_1:+66492373 Msa0369360:CDS
CGGGGAGCTGGGTATGGATT+TGG 0.324114 3_1:+66492309 Msa0369360:CDS
ATTTACTTCAAGCTTAAGTT+TGG 0.327831 3_1:+66494391 Msa0369360:CDS
TTCCTTCTGTGGAGAAAGAT+TGG 0.334000 3_1:+66492808 Msa0369360:CDS
TGGTTGAAGACTAAAGAATT+TGG 0.339281 3_1:+66493645 Msa0369360:CDS
GAAGCCTTAACAGAAGTAAT+AGG 0.340459 3_1:-66492846 None:intergenic
CCGGGTGTTATAGTGAGTTT+CGG 0.344767 3_1:+66492636 Msa0369360:CDS
AATCTTGCAACCAAAGGTTT+TGG 0.345746 3_1:-66495327 None:intergenic
AGATTCATTATGATAAGTTT+TGG 0.346758 3_1:+66492733 Msa0369360:CDS
CACCAAAACACCATCGTCTT+TGG 0.351706 3_1:-66493853 None:intergenic
TTCTGTTCATTCTCTTCAGC+TGG 0.356583 3_1:-66495262 None:intergenic
GAAAGTTACTTGAAATTTCT+GGG 0.360353 3_1:+66492780 Msa0369360:CDS
GTTGCAAGATTTGTATAATC+AGG 0.362930 3_1:+66495339 Msa0369360:CDS
GTTTGGATGAAGAAATTATC+AGG 0.364831 3_1:+66494408 Msa0369360:CDS
GCTGGGTATGGATTTGGATT+AGG 0.367917 3_1:+66492315 Msa0369360:CDS
AATCTCGGAGCTTCGAAAAC+CGG 0.369741 3_1:-66492202 None:intergenic
GTGAGACGGAGGTGGAGAAC+TGG 0.376959 3_1:+66495527 Msa0369360:CDS
CCCGGCGTGGCTGCTCCGGC+AGG 0.386214 3_1:-66492290 None:intergenic
CCACGCCGGGGAGCTGGGTA+TGG 0.388405 3_1:+66492303 Msa0369360:CDS
AAGGTGTTGTTGAGGAATTA+GGG 0.389563 3_1:+66492700 Msa0369360:CDS
AGGAAAGAATATTGAGTGTA+AGG 0.390011 3_1:+66495023 Msa0369360:CDS
TCTTCCTATTACTTCTGTTA+AGG 0.396693 3_1:+66492842 Msa0369360:CDS
TAGACATGTTGCATGATCTT+AGG 0.399007 3_1:-66494211 None:intergenic
ATAAACAAACGAAAATTGAT+TGG 0.399291 3_1:+66495151 Msa0369360:CDS
AGCGGAGGACTGTGTGGGAC+CGG 0.403002 3_1:+66492617 Msa0369360:CDS
CATTGTCTTGCTGATGATAC+TGG 0.406130 3_1:-66491715 None:intergenic
TGATAGAAATGGAAATTATC+AGG 0.406132 3_1:-66492060 None:intergenic
TAAAGAAGGAAAAGAATTGC+TGG 0.406283 3_1:-66494111 None:intergenic
TTCTTTATTCTTGGCAAAGC+AGG 0.407178 3_1:+66494127 Msa0369360:CDS
TGATGATAGAGTGTTGAAAT+TGG 0.408070 3_1:+66495405 Msa0369360:CDS
GATTTGAGAGGTCCGCTAAA+TGG 0.409385 3_1:+66493498 Msa0369360:CDS
AATCGATTAGGGATTTCCTT+TGG 0.411593 3_1:-66494371 None:intergenic
GCGAAAACTCTACTAACAAC+CGG 0.412020 3_1:-66492174 None:intergenic
TATTCTTTCCTCAGAATAGT+TGG 0.412079 3_1:-66495011 None:intergenic
GGTCCGCTAAATGGTTCATT+TGG 0.414541 3_1:+66493507 Msa0369360:CDS
GGGTTGCGTGTGATTTGTAT+TGG 0.415204 3_1:+66492531 Msa0369360:CDS
TAAAGTTGAGTTGCAGCATT+TGG 0.415715 3_1:+66492131 Msa0369360:CDS
CAAGATAAAAGTTGAACATA+TGG 0.418254 3_1:+66495057 Msa0369360:CDS
TTGATATTAATGATGGAAGT+AGG 0.423325 3_1:-66491627 None:intergenic
TTGTACGCCGCGTAATAACT+TGG 0.424168 3_1:+66493890 Msa0369360:CDS
AGATTCTTGTTCGGAGTAAA+GGG 0.426301 3_1:+66492406 Msa0369360:CDS
GGTTGCGTGTGATTTGTATT+GGG 0.426999 3_1:+66492532 Msa0369360:CDS
TTGTTTATGAAATTTAGATT+AGG 0.428862 3_1:-66495136 None:intergenic
TGTTAGCTACACCGATGCTT+TGG 0.432897 3_1:-66495096 None:intergenic
TCCATTGTATATTGAACTGC+AGG 0.435701 3_1:-66494344 None:intergenic
CAACTGAGAACCAAAACCTT+TGG 0.435780 3_1:+66495317 Msa0369360:CDS
ATAACTTCAACAAAATTCTT+GGG 0.438011 3_1:+66495434 Msa0369360:CDS
ATTGGTCCATGACTTCGGTT+TGG 0.439047 3_1:-66495477 None:intergenic
TCCTTCTGTGGAGAAAGATT+GGG 0.439992 3_1:+66492809 Msa0369360:CDS
AAATGTGAACATGAAGTTCT+TGG 0.443256 3_1:+66493561 Msa0369360:CDS
CTACTGCGTCGTTTAAAGCT+TGG 0.445744 3_1:-66491756 None:intergenic
CGTATGCAGCTGCAAGCAAT+TGG 0.448193 3_1:-66495495 None:intergenic
AACACTTGTCCTACTGTTGT+GGG 0.450722 3_1:+66493954 Msa0369360:CDS
CCTGCCGGAGCAGCCACGCC+GGG 0.452044 3_1:+66492290 Msa0369360:CDS
AGCAGCCACGCCGGGGAGCT+GGG 0.453325 3_1:+66492298 Msa0369360:CDS
GCTCCCCGGCGTGGCTGCTC+CGG 0.456888 3_1:-66492294 None:intergenic
TCAAGGGAATCAAAATCATA+TGG 0.457326 3_1:-66495385 None:intergenic
GAATTCGCTGATGCAGAACT+TGG 0.458181 3_1:-66493923 None:intergenic
GAGAAGCTTTAGCGAGGCAG+TGG 0.458410 3_1:+66492470 Msa0369360:CDS
AGCACTCGATCTTTGCCTCT+CGG 0.459304 3_1:+66491921 Msa0369360:CDS
AAGTTAGACGGGTATGGATC+AGG 0.465175 3_1:-66493615 None:intergenic
GAGATTCTTGTTCGGAGTAA+AGG 0.465411 3_1:+66492405 Msa0369360:CDS
GAACAGAAACAAACAGATGA+TGG 0.468165 3_1:+66495277 Msa0369360:CDS
GTTGCTGTTGATGATAGAAA+TGG 0.470693 3_1:-66492071 None:intergenic
CTGAATTACTGTATGGAAGC+CGG 0.471612 3_1:+66494693 Msa0369360:CDS
TCTCTAGCTGAATTACTGTA+TGG 0.471880 3_1:+66494686 Msa0369360:CDS
AGATTAAACTTGCAATTCTC+CGG 0.478336 3_1:+66492220 Msa0369360:CDS
ATTATTAAAACAATAGTTTG+TGG 0.482556 3_1:+66494563 Msa0369360:CDS
GACATCGTTTGAACGCCAAC+AGG 0.484414 3_1:-66494077 None:intergenic
TTCCCATTTACTCGCAGATA+CGG 0.488156 3_1:+66495192 Msa0369360:CDS
AGTTAAGCAGGATGAAGATT+GGG 0.488340 3_1:-66494441 None:intergenic
GTAACCACGGATCTCGGCTT+AGG 0.488783 3_1:+66494284 Msa0369360:CDS
TCTATTGTGAACGATGATAG+TGG 0.489016 3_1:+66492669 Msa0369360:CDS
GGAAGAGATGCGGAAGTGGC+CGG 0.489057 3_1:-66492239 None:intergenic
GATGGCAAGATGAAGCCATA+AGG 0.489339 3_1:+66494537 Msa0369360:CDS
CTTGCTGATGATACTGGTGT+TGG 0.489518 3_1:-66491709 None:intergenic
GCCATAAGCGAATTCGAAAC+CGG 0.490442 3_1:-66492000 None:intergenic
ATTTCAACACTCTATCATCA+AGG 0.490477 3_1:-66495402 None:intergenic
GACTTCGGTTTGGATTTGTA+AGG 0.491765 3_1:-66495467 None:intergenic
CGATTAGGGATTTCCTTTGG+AGG 0.492732 3_1:-66494368 None:intergenic
ATTTAGCGGACCTCTCAAAT+CGG 0.494117 3_1:-66493496 None:intergenic
ACTCGCAGATACGGCTAAAA+GGG 0.494908 3_1:+66495201 Msa0369360:CDS
CTGAGTTCCAAAGAAATGAA+TGG 0.494942 3_1:+66494737 Msa0369360:CDS
CATTGAAAATGTTGATAAAG+CGG 0.495371 3_1:+66494841 Msa0369360:CDS
AGCCGTATCTGCGAGTAAAT+GGG 0.496780 3_1:-66495194 None:intergenic
ACTCAATCTAAAACTATCCT+TGG 0.497044 3_1:-66495667 None:intergenic
GTAGGACAAGTGTTTGCCTT+GGG 0.498588 3_1:-66493945 None:intergenic
ACCATTGAGGTAAGTTAGAC+GGG 0.498702 3_1:-66493626 None:intergenic
TCTGGGTGGATTTCCTTCTG+TGG 0.499664 3_1:+66492797 Msa0369360:CDS
TCTCTTCCGTCGTGGTCCAC+CGG 0.500377 3_1:+66492254 Msa0369360:CDS
AGGTTTATAAATTAGAAAAG+TGG 0.501488 3_1:-66491602 None:intergenic
CAATTTATTGCTGGTAGGAA+AGG 0.502155 3_1:-66494315 None:intergenic
CTCTTTCGAAGGCGGTAAGA+TGG 0.502545 3_1:+66494519 Msa0369360:CDS
GATTCATTTGTACCACTTGG+TGG 0.502803 3_1:+66493456 Msa0369360:CDS
TTGTCTCAAGCCATCAAGAC+AGG 0.505339 3_1:+66494884 Msa0369360:CDS
CATATCAGAGACCAAGGTCC+AGG 0.505539 3_1:+66492874 Msa0369360:CDS
GAAGATTCAAATCTAAAAGC+CGG 0.505636 3_1:-66495240 None:intergenic
TGAGGTAAGTTAGACGGGTA+TGG 0.506595 3_1:-66493621 None:intergenic
GGAAAGAATATTGAGTGTAA+GGG 0.506915 3_1:+66495024 Msa0369360:CDS
GATGATAGTGGATTTGTTGA+AGG 0.507225 3_1:+66492681 Msa0369360:CDS
ATATTGAGTGTAAGGGGCAG+AGG 0.508668 3_1:+66495031 Msa0369360:CDS
AAGTTAAGCAGGATGAAGAT+TGG 0.509048 3_1:-66494442 None:intergenic
GCAGTGGAGAAGCGGAGAGA+AGG 0.509881 3_1:+66492486 Msa0369360:CDS
ATAATAGTCAAAAGTTAAGC+AGG 0.510086 3_1:-66494453 None:intergenic
TGAATTACTGTATGGAAGCC+GGG 0.510674 3_1:+66494694 Msa0369360:CDS
CAATCTAAAACTATCCTTGG+TGG 0.511122 3_1:-66495664 None:intergenic
GGCGGCGATTAAACGATCTC+AGG 0.513617 3_1:+66492020 Msa0369360:CDS
CGACGGAAGAGATGCGGAAG+TGG 0.514717 3_1:-66492243 None:intergenic
AATGCAAAAGATCTTGAGTC+AGG 0.517636 3_1:+66494185 Msa0369360:CDS
CAAGAATCTCCCCAATTCTC+CGG 0.518805 3_1:-66492392 None:intergenic
TCTTTAGTCTTCAACCATTG+AGG 0.520237 3_1:-66493639 None:intergenic
GAAACGTTGTTATGCGAAGA+AGG 0.521878 3_1:-66491961 None:intergenic
GAGAATTGCAAGTTTAATCT+CGG 0.522538 3_1:-66492217 None:intergenic
TGCTTTGCCAAGAATAAAGA+AGG 0.523195 3_1:-66494125 None:intergenic
AACCATTGAGGTAAGTTAGA+CGG 0.523839 3_1:-66493627 None:intergenic
GAATTGGGGAGATTCTTGTT+CGG 0.523960 3_1:+66492397 Msa0369360:CDS
AACGATCTCAGGCGAATCAA+CGG 0.525143 3_1:+66492031 Msa0369360:CDS
TCACGGAGAATTGAAGAAGA+TGG 0.525588 3_1:-66491847 None:intergenic
ACCTGCCGGAGCAGCCACGC+CGG 0.530263 3_1:+66492289 Msa0369360:CDS
ACTTCAGTAACCACGGATCT+CGG 0.530831 3_1:+66494278 Msa0369360:CDS
ATGGATTCATTTGTACCACT+TGG 0.532406 3_1:+66493453 Msa0369360:CDS
TTCCTCTGATCATGAACCAC+CGG 0.533257 3_1:+66491981 Msa0369360:CDS
AAACACTTGTCCTACTGTTG+TGG 0.533314 3_1:+66493953 Msa0369360:CDS
TGTACACTTGAAGCTTGCTC+TGG 0.535033 3_1:-66495637 None:intergenic
CCCCACGCTGATTTAACCCA+TGG 0.536622 3_1:-66494607 None:intergenic
TCCCAATCTTTCTCCACAGA+AGG 0.536779 3_1:-66492810 None:intergenic
ATGGCAAGATGAAGCCATAA+GGG 0.538048 3_1:+66494538 Msa0369360:CDS
TCCCACACAGTCCTCCGCTA+TGG 0.538928 3_1:-66492613 None:intergenic
GAAAGAATATTGAGTGTAAG+GGG 0.538947 3_1:+66495025 Msa0369360:CDS
TATACAAATCTTGCAACCAA+AGG 0.539912 3_1:-66495333 None:intergenic
TTGAGATTGATGTATTCTCT+AGG 0.542305 3_1:-66494044 None:intergenic
GCGTGTGATTTGTATTGGGA+AGG 0.545422 3_1:+66492536 Msa0369360:CDS
GCGGAGGACTGTGTGGGACC+GGG 0.546795 3_1:+66492618 Msa0369360:CDS
ACCCGTCTAACTTACCTCAA+TGG 0.547191 3_1:+66493625 Msa0369360:CDS
AGTAGGACAAGTGTTTGCCT+TGG 0.548623 3_1:-66493946 None:intergenic
ACATTTAATTTAAATATGCA+AGG 0.550011 3_1:-66495851 None:intergenic
AAGCAATTGGTCCATGACTT+CGG 0.550343 3_1:-66495482 None:intergenic
CTCAACTCTCATGCACCTGT+TGG 0.550793 3_1:+66494062 Msa0369360:CDS
TTGCACTCTGCAATTTGAAG+AGG 0.551368 3_1:-66491540 None:intergenic
TAAATCAGCGTGGGGACAAG+TGG 0.552622 3_1:+66494615 Msa0369360:CDS
TTTGTCTGTTCTTGATGACC+CGG 0.555553 3_1:+66492155 Msa0369360:CDS
TTGGATTTGTAAGGCACACT+CGG 0.557236 3_1:-66495458 None:intergenic
CGCAACCCGGCAAGTTCCAA+AGG 0.560162 3_1:-66492516 None:intergenic
ATTGGGAAGGAGTTAGAGAG+TGG 0.560270 3_1:+66492549 Msa0369360:CDS
GGGCACATACAACATCAAAC+CGG 0.565540 3_1:+66495221 Msa0369360:CDS
TCAATGAAAACCACAGACAA+TGG 0.567044 3_1:-66494824 None:intergenic
ATTTGTTGAAGGTGTTGTTG+AGG 0.567097 3_1:+66492692 Msa0369360:CDS
ACAAATCCAAACCGAAGTCA+TGG 0.568051 3_1:+66495471 Msa0369360:CDS
ATGTCCGCGGCGTTTAGCGA+CGG 0.569403 3_1:-66491779 None:intergenic
GTTCAGCGAGTTCTCTGCGG+TGG 0.570824 3_1:+66495550 Msa0369360:CDS
TGAGACGGAGGTGGAGAACT+GGG 0.571206 3_1:+66495528 Msa0369360:CDS
GAGAAGACAACAATCACTGA+AGG 0.573213 3_1:-66495692 None:intergenic
CTCAGACAGTGAGACGGAGG+TGG 0.573557 3_1:+66495519 Msa0369360:CDS
CAAATCCATACCCAGCTCCC+CGG 0.573615 3_1:-66492308 None:intergenic
AAAATAGTTTGATGCAGACA+AGG 0.576696 3_1:+66494981 Msa0369360:CDS
TTTGTCAATTTATTGCTGGT+AGG 0.579086 3_1:-66494320 None:intergenic
AATACAAATCACACGCAACC+CGG 0.579246 3_1:-66492529 None:intergenic
CAACCAAATGAACCATTTAG+CGG 0.582099 3_1:-66493510 None:intergenic
ATTAATGATGGAAGTAGGTG+AGG 0.583952 3_1:-66491622 None:intergenic
GGAGAATTGAAGAAGATGGA+AGG 0.584272 3_1:-66491843 None:intergenic
CAATGAAATCCCACAACAGT+AGG 0.584680 3_1:-66493963 None:intergenic
TTTGTTGGACCCGATAGGCA+TGG 0.587234 3_1:+66494644 Msa0369360:CDS
GAGAATTGAAGAAGATGGAA+GGG 0.587996 3_1:-66491842 None:intergenic
CTAAAACTATCCTTGGTGGA+AGG 0.589007 3_1:-66495660 None:intergenic
TCACCATATTGATTATCATG+AGG 0.589932 3_1:-66493537 None:intergenic
CTGTAAGCGTGGTGAGTAAG+CGG 0.590848 3_1:-66491893 None:intergenic
GGATGCAGTGTGAAATTCAG+AGG 0.593343 3_1:+66494758 Msa0369360:CDS
TGAGAATTTCCGGAGAATTG+GGG 0.593530 3_1:+66492383 Msa0369360:CDS
GACATCAGAAACCAAAGCAT+CGG 0.598010 3_1:+66495085 Msa0369360:CDS
TTAGCGAGGCAGTGGAGAAG+CGG 0.598530 3_1:+66492478 Msa0369360:CDS
TCATCACAGTCCGATTTGAG+AGG 0.598876 3_1:+66493486 Msa0369360:CDS
ATATACAATGGAGCCTCCAA+AGG 0.602874 3_1:+66494355 Msa0369360:CDS
CCACATGCTCCGAGAAGCAG+AGG 0.605109 3_1:-66492435 None:intergenic
ACCATGGGTTAAATCAGCGT+GGG 0.605355 3_1:+66494606 Msa0369360:CDS
TGATATATATACCTGGACCT+TGG 0.607527 3_1:-66492885 None:intergenic
ACCTGCAGTTCAATATACAA+TGG 0.608031 3_1:+66494343 Msa0369360:CDS
TTTCAACACTCTATCATCAA+GGG 0.608260 3_1:-66495401 None:intergenic
CCGAAACTCACTATAACACC+CGG 0.608781 3_1:-66492636 None:intergenic
CCTCTGCTTCTCGGAGCATG+TGG 0.611112 3_1:+66492435 Msa0369360:CDS
CTGCCGGAGCAGCCACGCCG+GGG 0.611940 3_1:+66492291 Msa0369360:CDS
TGCCATAGCGGAGGACTGTG+TGG 0.612736 3_1:+66492611 Msa0369360:CDS
AGATGGAAGGGATAATAAAG+CGG 0.614914 3_1:-66491830 None:intergenic
GGGAGACAGTTGACTACCAT+CGG 0.617296 3_1:-66494246 None:intergenic
AAAACCCAACAAAATAATAG+GGG 0.617591 3_1:-66495769 None:intergenic
GCCATAGCGGAGGACTGTGT+GGG 0.619983 3_1:+66492612 Msa0369360:CDS
GGTTACTGAAGTCACAGATG+TGG 0.622545 3_1:-66494267 None:intergenic
GGAAACTTCCAACTATTCTG+AGG 0.622677 3_1:+66495003 Msa0369360:CDS
ACTCATCTACGAGAAAATCA+AGG 0.623111 3_1:-66494790 None:intergenic
AACCGGTGGTTCATGATCAG+AGG 0.623728 3_1:-66491983 None:intergenic
CGAAAACTCTACTAACAACC+GGG 0.624716 3_1:-66492173 None:intergenic
ATCTGTGACTTCAGTAACCA+CGG 0.626780 3_1:+66494271 Msa0369360:CDS
TCTGCATCAGCGAATTCCCA+AGG 0.632871 3_1:+66493929 Msa0369360:CDS
GTTAGAGAGTGGTGACTGTG+AGG 0.634691 3_1:+66492560 Msa0369360:CDS
AGTGGTGACTGTGAGGTGAT+CGG 0.635526 3_1:+66492567 Msa0369360:CDS
GACCATGGGTTAAATCAGCG+TGG 0.635549 3_1:+66494605 Msa0369360:CDS
GGACCACGACGGAAGAGATG+CGG 0.635718 3_1:-66492249 None:intergenic
CCATACCCAGCTCCCCGGCG+TGG 0.637853 3_1:-66492303 None:intergenic
AGTTTGTATTCATAAAACGA+TGG 0.638807 3_1:-66491676 None:intergenic
CTGAATCATATCAGAGACCA+AGG 0.639617 3_1:+66492868 Msa0369360:CDS
GTTACTGAAGTCACAGATGT+GGG 0.645484 3_1:-66494266 None:intergenic
GGTTTCGAATTCGCTTATGG+CGG 0.649803 3_1:+66492002 Msa0369360:CDS
TGCTTTGAGAAGCTTTAGCG+AGG 0.650399 3_1:+66492464 Msa0369360:CDS
GCAAATTGCTGCCATAGCGG+AGG 0.651613 3_1:+66492602 Msa0369360:CDS
CTTCCGCATCTCTTCCGTCG+TGG 0.654309 3_1:+66492246 Msa0369360:CDS
AGAAGACAACAATCACTGAA+GGG 0.655116 3_1:-66495691 None:intergenic
AAATAGTTTGATGCAGACAA+GGG 0.658235 3_1:+66494982 Msa0369360:CDS
TATACCTAAGCCGAGATCCG+TGG 0.660039 3_1:-66494288 None:intergenic
GATGCAGTGTGAAATTCAGA+GGG 0.660370 3_1:+66494759 Msa0369360:CDS
TCTAGTTCAAGTGTGTCCGA+TGG 0.664640 3_1:+66494230 Msa0369360:CDS
AAGCAGGATGAAGATTGGGA+CGG 0.667416 3_1:-66494437 None:intergenic
AAGTTTCACAATAGAACTAG+CGG 0.670901 3_1:-66495605 None:intergenic
ATGTTGTTTGTGCATGTCCG+CGG 0.672181 3_1:-66491792 None:intergenic
CTGCAAGAAACCATTGTCTG+TGG 0.672802 3_1:+66494814 Msa0369360:CDS
CGTCTCAGACAGTGAGACGG+AGG 0.682267 3_1:+66495516 Msa0369360:CDS
GCGAACGAGAACATGCGTCA+CGG 0.682914 3_1:-66491864 None:intergenic
TGGGTTCAGCGAGTTCTCTG+CGG 0.688804 3_1:+66495547 Msa0369360:CDS
TGTTATGCGAAGAAGGTGAA+CGG 0.688938 3_1:-66491954 None:intergenic
ATACGTCTCAGACAGTGAGA+CGG 0.691422 3_1:+66495513 Msa0369360:CDS
GGGTGTTATAGTGAGTTTCG+GGG 0.693990 3_1:+66492638 Msa0369360:CDS
AAAGCAAATTGCTGCCATAG+CGG 0.699527 3_1:+66492599 Msa0369360:CDS
AGTTACTTGAAATTTCTGGG+TGG 0.702382 3_1:+66492783 Msa0369360:CDS
CCATGGGTTAAATCAGCGTG+GGG 0.707376 3_1:+66494607 Msa0369360:CDS
GTAGCCGTCGCTAAACGCCG+CGG 0.708476 3_1:+66491775 Msa0369360:CDS
CAAGTGTACACCTTCCACCA+AGG 0.712467 3_1:+66495650 Msa0369360:CDS
TCAGCGCAGACCAAAGACGA+TGG 0.718112 3_1:+66493843 Msa0369360:intron
AACGGTCAAGTGAAACCGAG+AGG 0.724784 3_1:-66491936 None:intergenic
ATAAGCGAATTCGAAACCGG+TGG 0.727286 3_1:-66491997 None:intergenic
ATGTCGTCCAAGTTATTACG+CGG 0.732258 3_1:-66493897 None:intergenic
AGTGCTTTGAACTGTAAGCG+TGG 0.753908 3_1:-66491904 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATGTGAAATTATATT+TGG + chr3_1:66493166-66493185 Msa0369360:intron 10.0%
!!! AGAAATTTTGATATTAATGA+TGG - chr3_1:66491637-66491656 None:intergenic 15.0%
!! AAAATTCATTTCTTTATCTT+TGG + chr3_1:66493012-66493031 Msa0369360:intron 15.0%
!!! TTTGTCTTAAACATTTTTTT+TGG + chr3_1:66493418-66493437 Msa0369360:intron 15.0%
!! AATTATTTGTATAAAAACTG+TGG + chr3_1:66493735-66493754 Msa0369360:intron 15.0%
!! ACTATTAAAGTATAAATCAA+TGG - chr3_1:66493777-66493796 None:intergenic 15.0%
!! ATTATTAAAACAATAGTTTG+TGG + chr3_1:66494563-66494582 Msa0369360:CDS 15.0%
!! TTGTTTATGAAATTTAGATT+AGG - chr3_1:66495139-66495158 None:intergenic 15.0%
!!! ACATTTAATTTAAATATGCA+AGG - chr3_1:66495854-66495873 None:intergenic 15.0%
!! AGGTTTATAAATTAGAAAAG+TGG - chr3_1:66491605-66491624 None:intergenic 20.0%
!!! AGATTCATTATGATAAGTTT+TGG + chr3_1:66492733-66492752 Msa0369360:CDS 20.0%
!! TATGATATGATATATATACC+TGG - chr3_1:66492895-66492914 None:intergenic 20.0%
!! TTAGTGATAATCATAGTAAT+TGG - chr3_1:66493395-66493414 None:intergenic 20.0%
!! TTTACACAAACAAAAAGAAA+AGG - chr3_1:66493805-66493824 None:intergenic 20.0%
!! ATAAACAAACGAAAATTGAT+TGG + chr3_1:66495151-66495170 Msa0369360:CDS 20.0%
!! AATAACTTCAACAAAATTCT+TGG + chr3_1:66495433-66495452 Msa0369360:CDS 20.0%
!! ATAACTTCAACAAAATTCTT+GGG + chr3_1:66495434-66495453 Msa0369360:CDS 20.0%
!! AAAAACCCAACAAAATAATA+GGG - chr3_1:66495773-66495792 None:intergenic 20.0%
!! AAAAAACCCAACAAAATAAT+AGG - chr3_1:66495774-66495793 None:intergenic 20.0%
!! TTGATATTAATGATGGAAGT+AGG - chr3_1:66491630-66491649 None:intergenic 25.0%
! AGTTTGTATTCATAAAACGA+TGG - chr3_1:66491679-66491698 None:intergenic 25.0%
! TGATAGAAATGGAAATTATC+AGG - chr3_1:66492063-66492082 None:intergenic 25.0%
!!! TCATTATGATAAGTTTTGGT+TGG + chr3_1:66492737-66492756 Msa0369360:CDS 25.0%
! TGAAAGTTACTTGAAATTTC+TGG + chr3_1:66492779-66492798 Msa0369360:CDS 25.0%
! GAAAGTTACTTGAAATTTCT+GGG + chr3_1:66492780-66492799 Msa0369360:CDS 25.0%
!! TAAAATATAATAAAGGGCAC+AGG - chr3_1:66493058-66493077 None:intergenic 25.0%
!!! GTCTTATTTGTATCATATGT+TGG + chr3_1:66493111-66493130 Msa0369360:intron 25.0%
! GTTCTGATTCCATTAAATTT+GGG + chr3_1:66493279-66493298 Msa0369360:intron 25.0%
! TTTCCTCATGATAATCAATA+TGG + chr3_1:66493534-66493553 Msa0369360:CDS 25.0%
!! TGCTTCAAATGAAAGATTTT+CGG + chr3_1:66493584-66493603 Msa0369360:CDS 25.0%
!! TTCTTTTCCTTCTTTATTCT+TGG + chr3_1:66494118-66494137 Msa0369360:CDS 25.0%
! ATTTACTTCAAGCTTAAGTT+TGG + chr3_1:66494391-66494410 Msa0369360:CDS 25.0%
! ATAATAGTCAAAAGTTAAGC+AGG - chr3_1:66494456-66494475 None:intergenic 25.0%
!! AGAGCTTCAAAAAGAATTTT+GGG - chr3_1:66494503-66494522 None:intergenic 25.0%
!! AAGAGCTTCAAAAAGAATTT+TGG - chr3_1:66494504-66494523 None:intergenic 25.0%
!!! TGTTTTAATAATAGCCCTTA+TGG - chr3_1:66494555-66494574 None:intergenic 25.0%
!! CATTGAAAATGTTGATAAAG+CGG + chr3_1:66494841-66494860 Msa0369360:CDS 25.0%
! CAAGATAAAAGTTGAACATA+TGG + chr3_1:66495057-66495076 Msa0369360:CDS 25.0%
! AAAACCCAACAAAATAATAG+GGG - chr3_1:66495772-66495791 None:intergenic 25.0%
GAGAATTGCAAGTTTAATCT+CGG - chr3_1:66492220-66492239 None:intergenic 30.0%
AGATTAAACTTGCAATTCTC+CGG + chr3_1:66492220-66492239 Msa0369360:CDS 30.0%
AAGATGTAGATGAGAATTTC+CGG + chr3_1:66492373-66492392 Msa0369360:CDS 30.0%
!!! TTATGATAAGTTTTGGTTGG+TGG + chr3_1:66492740-66492759 Msa0369360:CDS 30.0%
!!! TATGATAAGTTTTGGTTGGT+GGG + chr3_1:66492741-66492760 Msa0369360:CDS 30.0%
TCTTCCTATTACTTCTGTTA+AGG + chr3_1:66492842-66492861 Msa0369360:CDS 30.0%
TTGTATCATATGTTGGATGT+TGG + chr3_1:66493118-66493137 Msa0369360:intron 30.0%
CAAGTTGCAAAAACAAAGTT+TGG - chr3_1:66493236-66493255 None:intergenic 30.0%
CGTTCTGATTCCATTAAATT+TGG + chr3_1:66493278-66493297 Msa0369360:intron 30.0%
!!! TTTTTGGTTGTACAGCTTAA+TGG + chr3_1:66493434-66493453 Msa0369360:intron 30.0%
! TCACCATATTGATTATCATG+AGG - chr3_1:66493540-66493559 None:intergenic 30.0%
AAATGTGAACATGAAGTTCT+TGG + chr3_1:66493561-66493580 Msa0369360:CDS 30.0%
TGGTTGAAGACTAAAGAATT+TGG + chr3_1:66493645-66493664 Msa0369360:CDS 30.0%
TTGAGATTGATGTATTCTCT+AGG - chr3_1:66494047-66494066 None:intergenic 30.0%
TAAAGAAGGAAAAGAATTGC+TGG - chr3_1:66494114-66494133 None:intergenic 30.0%
TGGAACATATCAGTTAGATT+TGG - chr3_1:66494164-66494183 None:intergenic 30.0%
TTTGTCAATTTATTGCTGGT+AGG - chr3_1:66494323-66494342 None:intergenic 30.0%
!! AGGTTTTGTCAATTTATTGC+TGG - chr3_1:66494327-66494346 None:intergenic 30.0%
AGCTTGAAGTAAATCGATTA+GGG - chr3_1:66494385-66494404 None:intergenic 30.0%
AAGCTTGAAGTAAATCGATT+AGG - chr3_1:66494386-66494405 None:intergenic 30.0%
GTTTGGATGAAGAAATTATC+AGG + chr3_1:66494408-66494427 Msa0369360:CDS 30.0%
! TTTCTTTTTACCATGCCTAT+CGG - chr3_1:66494657-66494676 None:intergenic 30.0%
! TTGTCTGCATCAAACTATTT+TGG - chr3_1:66494982-66495001 None:intergenic 30.0%
AAAATAGTTTGATGCAGACA+AGG + chr3_1:66494981-66495000 Msa0369360:CDS 30.0%
AAATAGTTTGATGCAGACAA+GGG + chr3_1:66494982-66495001 Msa0369360:CDS 30.0%
TATTCTTTCCTCAGAATAGT+TGG - chr3_1:66495014-66495033 None:intergenic 30.0%
AGGAAAGAATATTGAGTGTA+AGG + chr3_1:66495023-66495042 Msa0369360:CDS 30.0%
GGAAAGAATATTGAGTGTAA+GGG + chr3_1:66495024-66495043 Msa0369360:CDS 30.0%
GAAAGAATATTGAGTGTAAG+GGG + chr3_1:66495025-66495044 Msa0369360:CDS 30.0%
GAAGATTCAAATCTAAAAGC+CGG - chr3_1:66495243-66495262 None:intergenic 30.0%
TATACAAATCTTGCAACCAA+AGG - chr3_1:66495336-66495355 None:intergenic 30.0%
GTTGCAAGATTTGTATAATC+AGG + chr3_1:66495339-66495358 Msa0369360:CDS 30.0%
TCAAGGGAATCAAAATCATA+TGG - chr3_1:66495388-66495407 None:intergenic 30.0%
TTTCAACACTCTATCATCAA+GGG - chr3_1:66495404-66495423 None:intergenic 30.0%
ATTTCAACACTCTATCATCA+AGG - chr3_1:66495405-66495424 None:intergenic 30.0%
!! TGATGATAGAGTGTTGAAAT+TGG + chr3_1:66495405-66495424 Msa0369360:CDS 30.0%
AAGTTTCACAATAGAACTAG+CGG - chr3_1:66495608-66495627 None:intergenic 30.0%
! ACTCAATCTAAAACTATCCT+TGG - chr3_1:66495670-66495689 None:intergenic 30.0%
TGATTGTTGTCTTCTCTATT+TGG + chr3_1:66495699-66495718 Msa0369360:three_prime_UTR 30.0%
!! TGTAACCCCTATTATTTTGT+TGG + chr3_1:66495764-66495783 Msa0369360:three_prime_UTR 30.0%
!! GTAACCCCTATTATTTTGTT+GGG + chr3_1:66495765-66495784 Msa0369360:three_prime_UTR 30.0%
!!! TTTGTTGGGTTTTTTTGTCT+AGG + chr3_1:66495779-66495798 Msa0369360:three_prime_UTR 30.0%
AATCAATGCAGACCAAAAAA+AGG + chr3_1:66495918-66495937 Msa0369360:three_prime_UTR 30.0%
! ATTAATGATGGAAGTAGGTG+AGG - chr3_1:66491625-66491644 None:intergenic 35.0%
! TTTAAAGCTTGGATTGCTTC+TGG - chr3_1:66491748-66491767 None:intergenic 35.0%
AGATGGAAGGGATAATAAAG+CGG - chr3_1:66491833-66491852 None:intergenic 35.0%
GAGAATTGAAGAAGATGGAA+GGG - chr3_1:66491845-66491864 None:intergenic 35.0%
!! GTTGCTGTTGATGATAGAAA+TGG - chr3_1:66492074-66492093 None:intergenic 35.0%
! TAAAGTTGAGTTGCAGCATT+TGG + chr3_1:66492131-66492150 Msa0369360:CDS 35.0%
!! TTAGGCTTTCCGTTTTTATC+TGG + chr3_1:66492333-66492352 Msa0369360:CDS 35.0%
!! TAGGCTTTCCGTTTTTATCT+GGG + chr3_1:66492334-66492353 Msa0369360:CDS 35.0%
ATGAGAATTTCCGGAGAATT+GGG + chr3_1:66492382-66492401 Msa0369360:CDS 35.0%
AGATTCTTGTTCGGAGTAAA+GGG + chr3_1:66492406-66492425 Msa0369360:CDS 35.0%
TCTATTGTGAACGATGATAG+TGG + chr3_1:66492669-66492688 Msa0369360:CDS 35.0%
!! GATGATAGTGGATTTGTTGA+AGG + chr3_1:66492681-66492700 Msa0369360:CDS 35.0%
!! ATTTGTTGAAGGTGTTGTTG+AGG + chr3_1:66492692-66492711 Msa0369360:CDS 35.0%
!! AAGGTGTTGTTGAGGAATTA+GGG + chr3_1:66492700-66492719 Msa0369360:CDS 35.0%
! AGTTACTTGAAATTTCTGGG+TGG + chr3_1:66492783-66492802 Msa0369360:CDS 35.0%
GAAGCCTTAACAGAAGTAAT+AGG - chr3_1:66492849-66492868 None:intergenic 35.0%
TGATATATATACCTGGACCT+TGG - chr3_1:66492888-66492907 None:intergenic 35.0%
TGAAAGAAGAACCATTAGAG+AGG - chr3_1:66493211-66493230 None:intergenic 35.0%
ATGGAATCAGAACGTGTAAA+CGG - chr3_1:66493272-66493291 None:intergenic 35.0%
ATGGATTCATTTGTACCACT+TGG + chr3_1:66493453-66493472 Msa0369360:CDS 35.0%
CAACCAAATGAACCATTTAG+CGG - chr3_1:66493513-66493532 None:intergenic 35.0%
AACCATTGAGGTAAGTTAGA+CGG - chr3_1:66493630-66493649 None:intergenic 35.0%
! TCTTTAGTCTTCAACCATTG+AGG - chr3_1:66493642-66493661 None:intergenic 35.0%
! AGCAAAAACGTTGACTGTTA+AGG + chr3_1:66493671-66493690 Msa0369360:CDS 35.0%
! AAACGTTGACTGTTAAGGTA+AGG + chr3_1:66493676-66493695 Msa0369360:intron 35.0%
TGCGCTGAATGAAAGAAAAA+TGG - chr3_1:66493831-66493850 None:intergenic 35.0%
TGCTTTGCCAAGAATAAAGA+AGG - chr3_1:66494128-66494147 None:intergenic 35.0%
TTCTTTATTCTTGGCAAAGC+AGG + chr3_1:66494127-66494146 Msa0369360:CDS 35.0%
! ACTCAAGATCTTTTGCATTC+TGG - chr3_1:66494184-66494203 None:intergenic 35.0%
AATGCAAAAGATCTTGAGTC+AGG + chr3_1:66494185-66494204 Msa0369360:CDS 35.0%
TAGACATGTTGCATGATCTT+AGG - chr3_1:66494214-66494233 None:intergenic 35.0%
CAATTTATTGCTGGTAGGAA+AGG - chr3_1:66494318-66494337 None:intergenic 35.0%
ACCTGCAGTTCAATATACAA+TGG + chr3_1:66494343-66494362 Msa0369360:CDS 35.0%
TCCATTGTATATTGAACTGC+AGG - chr3_1:66494347-66494366 None:intergenic 35.0%
AATCGATTAGGGATTTCCTT+TGG - chr3_1:66494374-66494393 None:intergenic 35.0%
AGTTAAGCAGGATGAAGATT+GGG - chr3_1:66494444-66494463 None:intergenic 35.0%
AAGTTAAGCAGGATGAAGAT+TGG - chr3_1:66494445-66494464 None:intergenic 35.0%
!!! TCTTTTTGAAGCTCTTTCGA+AGG + chr3_1:66494508-66494527 Msa0369360:CDS 35.0%
! GACAAGTGGATGAATTTTGT+TGG + chr3_1:66494629-66494648 Msa0369360:CDS 35.0%
! TTCTTTTTACCATGCCTATC+GGG - chr3_1:66494656-66494675 None:intergenic 35.0%
TCTCTAGCTGAATTACTGTA+TGG + chr3_1:66494686-66494705 Msa0369360:CDS 35.0%
! CCACAAAAGTAAAGTTTTCC+CGG - chr3_1:66494715-66494734 None:intergenic 35.0%
CTGAGTTCCAAAGAAATGAA+TGG + chr3_1:66494737-66494756 Msa0369360:CDS 35.0%
ACTGCATCCATTCATTTCTT+TGG - chr3_1:66494747-66494766 None:intergenic 35.0%
ACTCATCTACGAGAAAATCA+AGG - chr3_1:66494793-66494812 None:intergenic 35.0%
TCAATGAAAACCACAGACAA+TGG - chr3_1:66494827-66494846 None:intergenic 35.0%
! TGTGATTTTTCCTGTCTTGA+TGG - chr3_1:66494897-66494916 None:intergenic 35.0%
GAACAGAAACAAACAGATGA+TGG + chr3_1:66495277-66495296 Msa0369360:CDS 35.0%
! AATCTTGCAACCAAAGGTTT+TGG - chr3_1:66495330-66495349 None:intergenic 35.0%
! CAATCTAAAACTATCCTTGG+TGG - chr3_1:66495667-66495686 None:intergenic 35.0%
AGAAGACAACAATCACTGAA+GGG - chr3_1:66495694-66495713 None:intergenic 35.0%
!!! TCACAAACACCTCCTTTTTT+TGG - chr3_1:66495933-66495952 None:intergenic 35.0%
TTGCACTCTGCAATTTGAAG+AGG - chr3_1:66491543-66491562 None:intergenic 40.0%
CATTGTCTTGCTGATGATAC+TGG - chr3_1:66491718-66491737 None:intergenic 40.0%
GGAGAATTGAAGAAGATGGA+AGG - chr3_1:66491846-66491865 None:intergenic 40.0%
TCACGGAGAATTGAAGAAGA+TGG - chr3_1:66491850-66491869 None:intergenic 40.0%
TGTTATGCGAAGAAGGTGAA+CGG - chr3_1:66491957-66491976 None:intergenic 40.0%
GAAACGTTGTTATGCGAAGA+AGG - chr3_1:66491964-66491983 None:intergenic 40.0%
! TTTGTCTGTTCTTGATGACC+CGG + chr3_1:66492155-66492174 Msa0369360:CDS 40.0%
CGAAAACTCTACTAACAACC+GGG - chr3_1:66492176-66492195 None:intergenic 40.0%
GCGAAAACTCTACTAACAAC+CGG - chr3_1:66492177-66492196 None:intergenic 40.0%
!! AGGCTTTCCGTTTTTATCTG+GGG + chr3_1:66492335-66492354 Msa0369360:CDS 40.0%
!! TTTCCGTTTTTATCTGGGGT+TGG + chr3_1:66492339-66492358 Msa0369360:CDS 40.0%
TCACCAACCCCAGATAAAAA+CGG - chr3_1:66492345-66492364 None:intergenic 40.0%
GATGAGAATTTCCGGAGAAT+TGG + chr3_1:66492381-66492400 Msa0369360:CDS 40.0%
TGAGAATTTCCGGAGAATTG+GGG + chr3_1:66492383-66492402 Msa0369360:CDS 40.0%
GAATTGGGGAGATTCTTGTT+CGG + chr3_1:66492397-66492416 Msa0369360:CDS 40.0%
GAGATTCTTGTTCGGAGTAA+AGG + chr3_1:66492405-66492424 Msa0369360:CDS 40.0%
! GAGAGAAGGAGTTTTACCTT+TGG + chr3_1:66492500-66492519 Msa0369360:CDS 40.0%
!!! GTTTTACCTTTGGAACTTGC+CGG + chr3_1:66492510-66492529 Msa0369360:CDS 40.0%
!!! TTTTACCTTTGGAACTTGCC+GGG + chr3_1:66492511-66492530 Msa0369360:CDS 40.0%
AATACAAATCACACGCAACC+CGG - chr3_1:66492532-66492551 None:intergenic 40.0%
! GGTTGCGTGTGATTTGTATT+GGG + chr3_1:66492532-66492551 Msa0369360:CDS 40.0%
AAAGCAAATTGCTGCCATAG+CGG + chr3_1:66492599-66492618 Msa0369360:CDS 40.0%
!! GAAGGTGTTGTTGAGGAATT+AGG + chr3_1:66492699-66492718 Msa0369360:CDS 40.0%
TTCCTTCTGTGGAGAAAGAT+TGG + chr3_1:66492808-66492827 Msa0369360:CDS 40.0%
TCCTTCTGTGGAGAAAGATT+GGG + chr3_1:66492809-66492828 Msa0369360:CDS 40.0%
CTGAATCATATCAGAGACCA+AGG + chr3_1:66492868-66492887 Msa0369360:CDS 40.0%
TAGCTGCAGCCCAAATTTAA+TGG - chr3_1:66493291-66493310 None:intergenic 40.0%
CTTGCTAACATCGATAAGCT+TGG + chr3_1:66493347-66493366 Msa0369360:intron 40.0%
AACATCGATAAGCTTGGAGA+TGG + chr3_1:66493353-66493372 Msa0369360:intron 40.0%
GATTCATTTGTACCACTTGG+TGG + chr3_1:66493456-66493475 Msa0369360:CDS 40.0%
GATGAAAAAAAGCCACCAAG+TGG - chr3_1:66493471-66493490 None:intergenic 40.0%
! ATTTAGCGGACCTCTCAAAT+CGG - chr3_1:66493499-66493518 None:intergenic 40.0%
ACCATTGAGGTAAGTTAGAC+GGG - chr3_1:66493629-66493648 None:intergenic 40.0%
ACTGTTAAGGTAAGGTGTGT+AGG + chr3_1:66493684-66493703 Msa0369360:intron 40.0%
CTGTTAAGGTAAGGTGTGTA+GGG + chr3_1:66493685-66493704 Msa0369360:intron 40.0%
ATGTCGTCCAAGTTATTACG+CGG - chr3_1:66493900-66493919 None:intergenic 40.0%
AAACACTTGTCCTACTGTTG+TGG + chr3_1:66493953-66493972 Msa0369360:CDS 40.0%
AACACTTGTCCTACTGTTGT+GGG + chr3_1:66493954-66493973 Msa0369360:CDS 40.0%
CAATGAAATCCCACAACAGT+AGG - chr3_1:66493966-66493985 None:intergenic 40.0%
GTTACTGAAGTCACAGATGT+GGG - chr3_1:66494269-66494288 None:intergenic 40.0%
ATCTGTGACTTCAGTAACCA+CGG + chr3_1:66494271-66494290 Msa0369360:CDS 40.0%
ATATACAATGGAGCCTCCAA+AGG + chr3_1:66494355-66494374 Msa0369360:CDS 40.0%
!!! TTTTGAAGCTCTTTCGAAGG+CGG + chr3_1:66494511-66494530 Msa0369360:CDS 40.0%
ATGGCAAGATGAAGCCATAA+GGG + chr3_1:66494538-66494557 Msa0369360:CDS 40.0%
!! ACAAAAAGTGCTAACGACCA+TGG + chr3_1:66494590-66494609 Msa0369360:CDS 40.0%
!! CAAAAAGTGCTAACGACCAT+GGG + chr3_1:66494591-66494610 Msa0369360:CDS 40.0%
! TGAATTTTGTTGGACCCGAT+AGG + chr3_1:66494639-66494658 Msa0369360:CDS 40.0%
CTGAATTACTGTATGGAAGC+CGG + chr3_1:66494693-66494712 Msa0369360:CDS 40.0%
TGAATTACTGTATGGAAGCC+GGG + chr3_1:66494694-66494713 Msa0369360:CDS 40.0%
!! CCGGGAAAACTTTACTTTTG+TGG + chr3_1:66494712-66494731 Msa0369360:CDS 40.0%
GATGCAGTGTGAAATTCAGA+GGG + chr3_1:66494759-66494778 Msa0369360:CDS 40.0%
GGAAAAATCACAGACTCACA+TGG + chr3_1:66494905-66494924 Msa0369360:CDS 40.0%
GGAAACTTCCAACTATTCTG+AGG + chr3_1:66495003-66495022 Msa0369360:CDS 40.0%
GACATCAGAAACCAAAGCAT+CGG + chr3_1:66495085-66495104 Msa0369360:CDS 40.0%
TTCCCATTTACTCGCAGATA+CGG + chr3_1:66495192-66495211 Msa0369360:CDS 40.0%
TTCTGTTCATTCTCTTCAGC+TGG - chr3_1:66495265-66495284 None:intergenic 40.0%
CAACTGAGAACCAAAACCTT+TGG + chr3_1:66495317-66495336 Msa0369360:CDS 40.0%
TTGGATTTGTAAGGCACACT+CGG - chr3_1:66495461-66495480 None:intergenic 40.0%
!! GACTTCGGTTTGGATTTGTA+AGG - chr3_1:66495470-66495489 None:intergenic 40.0%
ACAAATCCAAACCGAAGTCA+TGG + chr3_1:66495471-66495490 Msa0369360:CDS 40.0%
AAGCAATTGGTCCATGACTT+CGG - chr3_1:66495485-66495504 None:intergenic 40.0%
CTAAAACTATCCTTGGTGGA+AGG - chr3_1:66495663-66495682 None:intergenic 40.0%
GAGAAGACAACAATCACTGA+AGG - chr3_1:66495695-66495714 None:intergenic 40.0%
CAATGCAGACCAAAAAAAGG+AGG + chr3_1:66495921-66495940 Msa0369360:three_prime_UTR 40.0%
CTTGCTGATGATACTGGTGT+TGG - chr3_1:66491712-66491731 None:intergenic 45.0%
! CTACTGCGTCGTTTAAAGCT+TGG - chr3_1:66491759-66491778 None:intergenic 45.0%
! ATGTTGTTTGTGCATGTCCG+CGG - chr3_1:66491795-66491814 None:intergenic 45.0%
! AGTGCTTTGAACTGTAAGCG+TGG - chr3_1:66491907-66491926 None:intergenic 45.0%
TTCCTCTGATCATGAACCAC+CGG + chr3_1:66491981-66492000 Msa0369360:CDS 45.0%
ATAAGCGAATTCGAAACCGG+TGG - chr3_1:66492000-66492019 None:intergenic 45.0%
! ACCGGTTTCGAATTCGCTTA+TGG + chr3_1:66491999-66492018 Msa0369360:CDS 45.0%
GCCATAAGCGAATTCGAAAC+CGG - chr3_1:66492003-66492022 None:intergenic 45.0%
GGTTTCGAATTCGCTTATGG+CGG + chr3_1:66492002-66492021 Msa0369360:CDS 45.0%
AACGATCTCAGGCGAATCAA+CGG + chr3_1:66492031-66492050 Msa0369360:CDS 45.0%
! AGTAGAGTTTTCGCTGAAGC+CGG + chr3_1:66492183-66492202 Msa0369360:CDS 45.0%
AATCTCGGAGCTTCGAAAAC+CGG - chr3_1:66492205-66492224 None:intergenic 45.0%
AGGTTACACAGAAAAACCGG+TGG - chr3_1:66492273-66492292 None:intergenic 45.0%
GGCAGGTTACACAGAAAAAC+CGG - chr3_1:66492276-66492295 None:intergenic 45.0%
! GGTTTTTCTGTGTAACCTGC+CGG + chr3_1:66492275-66492294 Msa0369360:CDS 45.0%
GCTGGGTATGGATTTGGATT+AGG + chr3_1:66492315-66492334 Msa0369360:CDS 45.0%
CAAGAATCTCCCCAATTCTC+CGG - chr3_1:66492395-66492414 None:intergenic 45.0%
GGGAAAAATCCTCTGCTTCT+CGG + chr3_1:66492426-66492445 Msa0369360:CDS 45.0%
!! TGCTTTGAGAAGCTTTAGCG+AGG + chr3_1:66492464-66492483 Msa0369360:CDS 45.0%
! GGGTTGCGTGTGATTTGTAT+TGG + chr3_1:66492531-66492550 Msa0369360:CDS 45.0%
! GCGTGTGATTTGTATTGGGA+AGG + chr3_1:66492536-66492555 Msa0369360:CDS 45.0%
ATTGGGAAGGAGTTAGAGAG+TGG + chr3_1:66492549-66492568 Msa0369360:CDS 45.0%
CCGAAACTCACTATAACACC+CGG - chr3_1:66492639-66492658 None:intergenic 45.0%
! CCGGGTGTTATAGTGAGTTT+CGG + chr3_1:66492636-66492655 Msa0369360:CDS 45.0%
! CGGGTGTTATAGTGAGTTTC+GGG + chr3_1:66492637-66492656 Msa0369360:CDS 45.0%
! GGGTGTTATAGTGAGTTTCG+GGG + chr3_1:66492638-66492657 Msa0369360:CDS 45.0%
TCCCAATCTTTCTCCACAGA+AGG - chr3_1:66492813-66492832 None:intergenic 45.0%
TGAAGCAACAGCCTCTCTAA+TGG + chr3_1:66493197-66493216 Msa0369360:intron 45.0%
! TCATCACAGTCCGATTTGAG+AGG + chr3_1:66493486-66493505 Msa0369360:CDS 45.0%
GATTTGAGAGGTCCGCTAAA+TGG + chr3_1:66493498-66493517 Msa0369360:CDS 45.0%
GGTCCGCTAAATGGTTCATT+TGG + chr3_1:66493507-66493526 Msa0369360:CDS 45.0%
AAGTTAGACGGGTATGGATC+AGG - chr3_1:66493618-66493637 None:intergenic 45.0%
TGAGGTAAGTTAGACGGGTA+TGG - chr3_1:66493624-66493643 None:intergenic 45.0%
ACCCGTCTAACTTACCTCAA+TGG + chr3_1:66493625-66493644 Msa0369360:CDS 45.0%
! GACCAAAGACGATGGTGTTT+TGG + chr3_1:66493851-66493870 Msa0369360:intron 45.0%
CACCAAAACACCATCGTCTT+TGG - chr3_1:66493856-66493875 None:intergenic 45.0%
!! CAAAGACGATGGTGTTTTGG+TGG + chr3_1:66493854-66493873 Msa0369360:CDS 45.0%
TTGTACGCCGCGTAATAACT+TGG + chr3_1:66493890-66493909 Msa0369360:CDS 45.0%
GAATTCGCTGATGCAGAACT+TGG - chr3_1:66493926-66493945 None:intergenic 45.0%
GTAGGACAAGTGTTTGCCTT+GGG - chr3_1:66493948-66493967 None:intergenic 45.0%
AGTAGGACAAGTGTTTGCCT+TGG - chr3_1:66493949-66493968 None:intergenic 45.0%
! GATTTTGCTGCTGTGGTTGT+CGG - chr3_1:66494012-66494031 None:intergenic 45.0%
! TGTCTACGATTTTGCTGCTG+TGG - chr3_1:66494019-66494038 None:intergenic 45.0%
! TCTAGTTCAAGTGTGTCCGA+TGG + chr3_1:66494230-66494249 Msa0369360:CDS 45.0%
GGTTACTGAAGTCACAGATG+TGG - chr3_1:66494270-66494289 None:intergenic 45.0%
ACTTCAGTAACCACGGATCT+CGG + chr3_1:66494278-66494297 Msa0369360:CDS 45.0%
CGATTAGGGATTTCCTTTGG+AGG - chr3_1:66494371-66494390 None:intergenic 45.0%
AAGCAGGATGAAGATTGGGA+CGG - chr3_1:66494440-66494459 None:intergenic 45.0%
GATGGCAAGATGAAGCCATA+AGG + chr3_1:66494537-66494556 Msa0369360:CDS 45.0%
! ACCATGGGTTAAATCAGCGT+GGG + chr3_1:66494606-66494625 Msa0369360:CDS 45.0%
GGATGCAGTGTGAAATTCAG+AGG + chr3_1:66494758-66494777 Msa0369360:CDS 45.0%
CTGCAAGAAACCATTGTCTG+TGG + chr3_1:66494814-66494833 Msa0369360:CDS 45.0%
TTGTCTCAAGCCATCAAGAC+AGG + chr3_1:66494884-66494903 Msa0369360:CDS 45.0%
ATATTGAGTGTAAGGGGCAG+AGG + chr3_1:66495031-66495050 Msa0369360:CDS 45.0%
TGTTAGCTACACCGATGCTT+TGG - chr3_1:66495099-66495118 None:intergenic 45.0%
AGCCGTATCTGCGAGTAAAT+GGG - chr3_1:66495197-66495216 None:intergenic 45.0%
TAGCCGTATCTGCGAGTAAA+TGG - chr3_1:66495198-66495217 None:intergenic 45.0%
TACTCGCAGATACGGCTAAA+AGG + chr3_1:66495200-66495219 Msa0369360:CDS 45.0%
ACTCGCAGATACGGCTAAAA+GGG + chr3_1:66495201-66495220 Msa0369360:CDS 45.0%
GGGCACATACAACATCAAAC+CGG + chr3_1:66495221-66495240 Msa0369360:CDS 45.0%
ATTGGTCCATGACTTCGGTT+TGG - chr3_1:66495480-66495499 None:intergenic 45.0%
ATACGTCTCAGACAGTGAGA+CGG + chr3_1:66495513-66495532 Msa0369360:CDS 45.0%
! TGTACACTTGAAGCTTGCTC+TGG - chr3_1:66495640-66495659 None:intergenic 45.0%
!! TACTATTAAAATATAATAAA+GGG - chr3_1:66493064-66493083 None:intergenic 5.0%
!! ATACTATTAAAATATAATAA+AGG - chr3_1:66493065-66493084 None:intergenic 5.0%
CTGTAAGCGTGGTGAGTAAG+CGG - chr3_1:66491896-66491915 None:intergenic 50.0%
AGCACTCGATCTTTGCCTCT+CGG + chr3_1:66491921-66491940 Msa0369360:CDS 50.0%
AACGGTCAAGTGAAACCGAG+AGG - chr3_1:66491939-66491958 None:intergenic 50.0%
AACCGGTGGTTCATGATCAG+AGG - chr3_1:66491986-66492005 None:intergenic 50.0%
GTTAGAGAGTGGTGACTGTG+AGG + chr3_1:66492560-66492579 Msa0369360:CDS 50.0%
AGTGGTGACTGTGAGGTGAT+CGG + chr3_1:66492567-66492586 Msa0369360:CDS 50.0%
! TCTGGGTGGATTTCCTTCTG+TGG + chr3_1:66492797-66492816 Msa0369360:CDS 50.0%
CATATCAGAGACCAAGGTCC+AGG + chr3_1:66492874-66492893 Msa0369360:CDS 50.0%
TCTGCATCAGCGAATTCCCA+AGG + chr3_1:66493929-66493948 Msa0369360:CDS 50.0%
CTCAACTCTCATGCACCTGT+TGG + chr3_1:66494062-66494081 Msa0369360:CDS 50.0%
GACATCGTTTGAACGCCAAC+AGG - chr3_1:66494080-66494099 None:intergenic 50.0%
GGGAGACAGTTGACTACCAT+CGG - chr3_1:66494249-66494268 None:intergenic 50.0%
TATACCTAAGCCGAGATCCG+TGG - chr3_1:66494291-66494310 None:intergenic 50.0%
CTCTTTCGAAGGCGGTAAGA+TGG + chr3_1:66494519-66494538 Msa0369360:CDS 50.0%
! GACCATGGGTTAAATCAGCG+TGG + chr3_1:66494605-66494624 Msa0369360:CDS 50.0%
! CCATGGGTTAAATCAGCGTG+GGG + chr3_1:66494607-66494626 Msa0369360:CDS 50.0%
TAAATCAGCGTGGGGACAAG+TGG + chr3_1:66494615-66494634 Msa0369360:CDS 50.0%
TTTGTTGGACCCGATAGGCA+TGG + chr3_1:66494644-66494663 Msa0369360:CDS 50.0%
CGTATGCAGCTGCAAGCAAT+TGG - chr3_1:66495498-66495517 None:intergenic 50.0%
CAAGTGTACACCTTCCACCA+AGG + chr3_1:66495650-66495669 Msa0369360:CDS 50.0%
GCGAACGAGAACATGCGTCA+CGG - chr3_1:66491867-66491886 None:intergenic 55.0%
GGCGGCGATTAAACGATCTC+AGG + chr3_1:66492020-66492039 Msa0369360:CDS 55.0%
GAAAAACCGGTGGACCACGA+CGG - chr3_1:66492263-66492282 None:intergenic 55.0%
CAAATCCATACCCAGCTCCC+CGG - chr3_1:66492311-66492330 None:intergenic 55.0%
! GAGAAGCTTTAGCGAGGCAG+TGG + chr3_1:66492470-66492489 Msa0369360:CDS 55.0%
TTAGCGAGGCAGTGGAGAAG+CGG + chr3_1:66492478-66492497 Msa0369360:CDS 55.0%
GCAAATTGCTGCCATAGCGG+AGG + chr3_1:66492602-66492621 Msa0369360:CDS 55.0%
TCAGCGCAGACCAAAGACGA+TGG + chr3_1:66493843-66493862 Msa0369360:intron 55.0%
GTAACCACGGATCTCGGCTT+AGG + chr3_1:66494284-66494303 Msa0369360:CDS 55.0%
!! CCCCACGCTGATTTAACCCA+TGG - chr3_1:66494610-66494629 None:intergenic 55.0%
TGAGACGGAGGTGGAGAACT+GGG + chr3_1:66495528-66495547 Msa0369360:CDS 55.0%
TGGGTTCAGCGAGTTCTCTG+CGG + chr3_1:66495547-66495566 Msa0369360:CDS 55.0%
ATGTCCGCGGCGTTTAGCGA+CGG - chr3_1:66491782-66491801 None:intergenic 60.0%
GGAAGAGATGCGGAAGTGGC+CGG - chr3_1:66492242-66492261 None:intergenic 60.0%
CGACGGAAGAGATGCGGAAG+TGG - chr3_1:66492246-66492265 None:intergenic 60.0%
CTTCCGCATCTCTTCCGTCG+TGG + chr3_1:66492246-66492265 Msa0369360:CDS 60.0%
GGACCACGACGGAAGAGATG+CGG - chr3_1:66492252-66492271 None:intergenic 60.0%
TCTCTTCCGTCGTGGTCCAC+CGG + chr3_1:66492254-66492273 Msa0369360:CDS 60.0%
CGGGGAGCTGGGTATGGATT+TGG + chr3_1:66492309-66492328 Msa0369360:CDS 60.0%
CCACATGCTCCGAGAAGCAG+AGG - chr3_1:66492438-66492457 None:intergenic 60.0%
CCTCTGCTTCTCGGAGCATG+TGG + chr3_1:66492435-66492454 Msa0369360:CDS 60.0%
GCAGTGGAGAAGCGGAGAGA+AGG + chr3_1:66492486-66492505 Msa0369360:CDS 60.0%
CGCAACCCGGCAAGTTCCAA+AGG - chr3_1:66492519-66492538 None:intergenic 60.0%
! TGCCATAGCGGAGGACTGTG+TGG + chr3_1:66492611-66492630 Msa0369360:CDS 60.0%
! GCCATAGCGGAGGACTGTGT+GGG + chr3_1:66492612-66492631 Msa0369360:CDS 60.0%
TCCCACACAGTCCTCCGCTA+TGG - chr3_1:66492616-66492635 None:intergenic 60.0%
CGTCTCAGACAGTGAGACGG+AGG + chr3_1:66495516-66495535 Msa0369360:CDS 60.0%
CTCAGACAGTGAGACGGAGG+TGG + chr3_1:66495519-66495538 Msa0369360:CDS 60.0%
GTGAGACGGAGGTGGAGAAC+TGG + chr3_1:66495527-66495546 Msa0369360:CDS 60.0%
GTTCAGCGAGTTCTCTGCGG+TGG + chr3_1:66495550-66495569 Msa0369360:CDS 60.0%
GTAGCCGTCGCTAAACGCCG+CGG + chr3_1:66491775-66491794 Msa0369360:CDS 65.0%
AGCGGAGGACTGTGTGGGAC+CGG + chr3_1:66492617-66492636 Msa0369360:CDS 65.0%
GCGGAGGACTGTGTGGGACC+GGG + chr3_1:66492618-66492637 Msa0369360:CDS 70.0%
ACCTGCCGGAGCAGCCACGC+CGG + chr3_1:66492289-66492308 Msa0369360:CDS 75.0%
AGCAGCCACGCCGGGGAGCT+GGG + chr3_1:66492298-66492317 Msa0369360:CDS 75.0%
CCATACCCAGCTCCCCGGCG+TGG - chr3_1:66492306-66492325 None:intergenic 75.0%
CCACGCCGGGGAGCTGGGTA+TGG + chr3_1:66492303-66492322 Msa0369360:CDS 75.0%
! CCTGCCGGAGCAGCCACGCC+GGG + chr3_1:66492290-66492309 Msa0369360:CDS 80.0%
! CTGCCGGAGCAGCCACGCCG+GGG + chr3_1:66492291-66492310 Msa0369360:CDS 80.0%
! GCTCCCCGGCGTGGCTGCTC+CGG - chr3_1:66492297-66492316 None:intergenic 80.0%
! GAGCAGCCACGCCGGGGAGC+TGG + chr3_1:66492297-66492316 Msa0369360:CDS 80.0%
! CCCGGCGTGGCTGCTCCGGC+AGG - chr3_1:66492293-66492312 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 66491536 66495988 66491536 ID=Msa0369360;Name=Msa0369360
chr3_1 mRNA 66491536 66495988 66491536 ID=Msa0369360-mRNA-1;Parent=Msa0369360;Name=Msa0369360-mRNA-1;_AED=0.01;_eAED=0.01;_QI=170|1|1|1|1|1|3|301|1089
chr3_1 exon 66491536 66492895 66491536 ID=Msa0369360-mRNA-1:exon:13535;Parent=Msa0369360-mRNA-1
chr3_1 exon 66493449 66493692 66493449 ID=Msa0369360-mRNA-1:exon:13536;Parent=Msa0369360-mRNA-1
chr3_1 exon 66493852 66495988 66493852 ID=Msa0369360-mRNA-1:exon:13537;Parent=Msa0369360-mRNA-1
chr3_1 five_prime_UTR 66491536 66491705 66491536 ID=Msa0369360-mRNA-1:five_prime_utr;Parent=Msa0369360-mRNA-1
chr3_1 CDS 66491706 66492895 66491706 ID=Msa0369360-mRNA-1:cds;Parent=Msa0369360-mRNA-1
chr3_1 CDS 66493449 66493692 66493449 ID=Msa0369360-mRNA-1:cds;Parent=Msa0369360-mRNA-1
chr3_1 CDS 66493852 66495687 66493852 ID=Msa0369360-mRNA-1:cds;Parent=Msa0369360-mRNA-1
chr3_1 three_prime_UTR 66495688 66495988 66495688 ID=Msa0369360-mRNA-1:three_prime_utr;Parent=Msa0369360-mRNA-1
Gene Sequence

>Msa0369360

ATGCCAACACCAGTATCATCAGCAAGACAATGCTTAACACCAGAAGCAATCCAAGCTTTAAACGACGCAGTAGCCGTCGCTAAACGCCGCGGACATGCACAAACAACATCGCTTCACGCAATATCCGCTTTATTATCCCTTCCATCTTCTTCAATTCTCCGTGACGCATGTTCTCGTTCGCGAAACTCCGCTTACTCACCACGCTTACAGTTCAAAGCACTCGATCTTTGCCTCTCGGTTTCACTTGACCGTTCACCTTCTTCGCATAACAACGTTTCCTCTGATCATGAACCACCGGTTTCGAATTCGCTTATGGCGGCGATTAAACGATCTCAGGCGAATCAACGGCGTCATCCTGATAATTTCCATTTCTATCATCAACAGCAACAGTTGCAGAATCAGCAAACGTTTTCTGTTAGTTCTGTTAAAGTTGAGTTGCAGCATTTGGTTTTGTCTGTTCTTGATGACCCGGTTGTTAGTAGAGTTTTCGCTGAAGCCGGTTTTCGAAGCTCCGAGATTAAACTTGCAATTCTCCGGCCACTTCCGCATCTCTTCCGTCGTGGTCCACCGGTTTTTCTGTGTAACCTGCCGGAGCAGCCACGCCGGGGAGCTGGGTATGGATTTGGATTAGGCTTTCCGTTTTTATCTGGGGTTGGTGATGTGAATGAAGATGTAGATGAGAATTTCCGGAGAATTGGGGAGATTCTTGTTCGGAGTAAAGGGAAAAATCCTCTGCTTCTCGGAGCATGTGGTAACGATGCTTTGAGAAGCTTTAGCGAGGCAGTGGAGAAGCGGAGAGAAGGAGTTTTACCTTTGGAACTTGCCGGGTTGCGTGTGATTTGTATTGGGAAGGAGTTAGAGAGTGGTGACTGTGAGGTGATCGGTTTGAAGTTAAAGCAAATTGCTGCCATAGCGGAGGACTGTGTGGGACCGGGTGTTATAGTGAGTTTCGGGGAGTTGAAGTCTATTGTGAACGATGATAGTGGATTTGTTGAAGGTGTTGTTGAGGAATTAGGGAAATTGTTGAAGATTCATTATGATAAGTTTTGGTTGGTGGGTGCTGCTGATAGTTATGAAAGTTACTTGAAATTTCTGGGTGGATTTCCTTCTGTGGAGAAAGATTGGGATTTGCAGATTCTTCCTATTACTTCTGTTAAGGCTTCTGAATCATATCAGAGACCAAGGTCCAGCTTAATGGATTCATTTGTACCACTTGGTGGCTTTTTTTCATCACAGTCCGATTTGAGAGGTCCGCTAAATGGTTCATTTGGTTGTTTTCCTCATGATAATCAATATGGTGAAAAATGTGAACATGAAGTTCTTGGTGCTTCAAATGAAAGATTTTCGGTTTCAGCTCCTGATCCATACCCGTCTAACTTACCTCAATGGTTGAAGACTAAAGAATTTGGCACAGCAAAAACGTTGACTGTTAAGACCAAAGACGATGGTGTTTTGGTGGATATTAGTGAATCTTGTACGCCGCGTAATAACTTGGACGACATATGCCAAGTTCTGCATCAGCGAATTCCCAAGGCAAACACTTGTCCTACTGTTGTGGGATTTCATTGTGCTGACAACAAAAACGAAGACGCCGACAACCACAGCAGCAAAATCGTAGACAAATCACCTAGAGAATACATCAATCTCAACTCTCATGCACCTGTTGGCGTTCAAACGATGTCTGCATTACAATCCAGCAATTCTTTTCCTTCTTTATTCTTGGCAAAGCAGGAGAAAAATATTCCAAATCTAACTGATATGTTCCAGAATGCAAAAGATCTTGAGTCAGGTGACCTAAGATCATGCAACATGTCTAGTTCAAGTGTGTCCGATGGTAGTCAACTGTCTCCCACATCTGTGACTTCAGTAACCACGGATCTCGGCTTAGGTATATGCTCCTTTCCTACCAGCAATAAATTGACAAAACCTGCAGTTCAATATACAATGGAGCCTCCAAAGGAAATCCCTAATCGATTTACTTCAAGCTTAAGTTTGGATGAAGAAATTATCAGGAAGCATCCGTCCCAATCTTCATCCTGCTTAACTTTTGACTATTATCGACAAGTTGATGATGCTAGAAATCCCAAAATTCTTTTTGAAGCTCTTTCGAAGGCGGTAAGATGGCAAGATGAAGCCATAAGGGCTATTATTAAAACAATAGTTTGTGGTTCAACAAAAAGTGCTAACGACCATGGGTTAAATCAGCGTGGGGACAAGTGGATGAATTTTGTTGGACCCGATAGGCATGGTAAAAAGAAAATTGCTGTTTCTCTAGCTGAATTACTGTATGGAAGCCGGGAAAACTTTACTTTTGTGGATCTGAGTTCCAAAGAAATGAATGGATGCAGTGTGAAATTCAGAGGGAAGTCTCACCTTGATTTTCTCGTAGATGAGTGCTGCAAGAAACCATTGTCTGTGGTTTTCATTGAAAATGTTGATAAAGCGGATATAGTAGCTCAAAGCAGTTTGTCTCAAGCCATCAAGACAGGAAAAATCACAGACTCACATGGACGAGAAGTTAGTGTAAACAATGCAATATTTGTTTTTTCTTTCTTAGATTACCAAAATAGTTTGATGCAGACAAGGGAAACTTCCAACTATTCTGAGGAAAGAATATTGAGTGTAAGGGGCAGAGGTATCAAGATAAAAGTTGAACATATGGTTAGAGACATCAGAAACCAAAGCATCGGTGTAGCTAACAATTCAATAAATGTCATTCCTAATCTAAATTTCATAAACAAACGAAAATTGATTGGTGACAGTGAACTTCACGATTCCCATTTACTCGCAGATACGGCTAAAAGGGCACATACAACATCAAACCGGCTTTTAGATTTGAATCTTCCAGCTGAAGAGAATGAACAGAAACAAACAGATGATGGAAACTTTGAACATGTCTCAACTGAGAACCAAAACCTTTGGTTGCAAGATTTGTATAATCAGGTTGATGAAACAGTTGTTTTTAAACCATATGATTTTGATTCCCTTGATGATAGAGTGTTGAAATTGGTAAGAAATAACTTCAACAAAATTCTTGGGTCCGAGTGTGCCTTACAAATCCAAACCGAAGTCATGGACCAATTGCTTGCAGCTGCATACGTCTCAGACAGTGAGACGGAGGTGGAGAACTGGGTTCAGCGAGTTCTCTGCGGTGGATTCACTGAAGCGCGAAGAAGATACAATCTCACCGCTAGTTCTATTGTGAAACTTGTCACATGTCCAGAGCAAGCTTCAAGTGTACACCTTCCACCAAGGATAGTTTTAGATTGA
Protein sequence

>Msa0369360

MPTPVSSARQCLTPEAIQALNDAVAVAKRRGHAQTTSLHAISALLSLPSSSILRDACSRSRNSAYSPRLQFKALDLCLSVSLDRSPSSHNNVSSDHEPPVSNSLMAAIKRSQANQRRHPDNFHFYHQQQQLQNQQTFSVSSVKVELQHLVLSVLDDPVVSRVFAEAGFRSSEIKLAILRPLPHLFRRGPPVFLCNLPEQPRRGAGYGFGLGFPFLSGVGDVNEDVDENFRRIGEILVRSKGKNPLLLGACGNDALRSFSEAVEKRREGVLPLELAGLRVICIGKELESGDCEVIGLKLKQIAAIAEDCVGPGVIVSFGELKSIVNDDSGFVEGVVEELGKLLKIHYDKFWLVGAADSYESYLKFLGGFPSVEKDWDLQILPITSVKASESYQRPRSSLMDSFVPLGGFFSSQSDLRGPLNGSFGCFPHDNQYGEKCEHEVLGASNERFSVSAPDPYPSNLPQWLKTKEFGTAKTLTVKTKDDGVLVDISESCTPRNNLDDICQVLHQRIPKANTCPTVVGFHCADNKNEDADNHSSKIVDKSPREYINLNSHAPVGVQTMSALQSSNSFPSLFLAKQEKNIPNLTDMFQNAKDLESGDLRSCNMSSSSVSDGSQLSPTSVTSVTTDLGLGICSFPTSNKLTKPAVQYTMEPPKEIPNRFTSSLSLDEEIIRKHPSQSSSCLTFDYYRQVDDARNPKILFEALSKAVRWQDEAIRAIIKTIVCGSTKSANDHGLNQRGDKWMNFVGPDRHGKKKIAVSLAELLYGSRENFTFVDLSSKEMNGCSVKFRGKSHLDFLVDECCKKPLSVVFIENVDKADIVAQSSLSQAIKTGKITDSHGREVSVNNAIFVFSFLDYQNSLMQTRETSNYSEERILSVRGRGIKIKVEHMVRDIRNQSIGVANNSINVIPNLNFINKRKLIGDSELHDSHLLADTAKRAHTTSNRLLDLNLPAEENEQKQTDDGNFEHVSTENQNLWLQDLYNQVDETVVFKPYDFDSLDDRVLKLVRNNFNKILGSECALQIQTEVMDQLLAAAYVSDSETEVENWVQRVLCGGFTEARRRYNLTASSIVKLVTCPEQASSVHLPPRIVLD*