Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126290 | XP_013468877.1 | 95.395 | 608 | 27 | 1 | 37 | 643 | 1 | 608 | 0.0 | 1174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126290 | sp|Q43092|SSG1_PEA | 84.918 | 610 | 82 | 4 | 37 | 643 | 1 | 603 | 0.0 | 1050 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126290 | A0A072VLQ9 | 95.395 | 608 | 27 | 1 | 37 | 643 | 1 | 608 | 0.0 | 1174 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031220 | Msa0126290 | 0.947199 | 1.070401e-105 | -8.615850e-47 |
| Msa0078510 | Msa0126290 | 0.991952 | 1.840397e-190 | -8.615850e-47 |
| Msa0126290 | Msa0137200 | 0.821694 | 3.524126e-53 | -8.615850e-47 |
| Msa0126290 | Msa0171170 | 0.952853 | 9.853677e-111 | -8.615850e-47 |
| Msa0126290 | Msa0182380 | 0.847962 | 8.295587e-60 | -8.615850e-47 |
| Msa0126290 | Msa0196370 | 0.825903 | 3.635899e-54 | -8.615850e-47 |
| Msa0126290 | Msa0238260 | 0.833066 | 6.599587e-56 | -8.615850e-47 |
| Msa0126290 | Msa0275690 | 0.834024 | 3.806380e-56 | -8.615850e-47 |
| Msa0126290 | Msa0316280 | 0.816912 | 4.329156e-52 | -8.615850e-47 |
| Msa0126290 | Msa0369360 | 0.818744 | 1.671003e-52 | -8.615850e-47 |
| Msa0126290 | Msa0416800 | 0.813006 | 3.184122e-51 | -8.615850e-47 |
| Msa0126290 | Msa0463460 | 0.829768 | 4.278966e-55 | -8.615850e-47 |
| Msa0126290 | Msa0479740 | 0.835400 | 1.715206e-56 | -8.615850e-47 |
| Msa0126290 | Msa0509020 | 0.829340 | 5.437356e-55 | -8.615850e-47 |
| Msa0126290 | Msa0523360 | 0.801494 | 8.767212e-49 | -8.615850e-47 |
| Msa0126290 | Msa1109520 | 0.811616 | 6.405939e-51 | -8.615850e-47 |
| Msa0126290 | Msa1404500 | 0.855409 | 6.431312e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126290 | MtrunA17_Chr1g0189131 | 95.395 | 608 | 27 | 1 | 37 | 643 | 1 | 608 | 0.0 | 1174 |
| Msa0126290 | MtrunA17_Chr8g0345941 | 74.177 | 577 | 144 | 2 | 71 | 643 | 41 | 616 | 0.0 | 876 |
| Msa0126290 | MtrunA17_Chr6g0453261 | 41.061 | 509 | 270 | 10 | 117 | 617 | 267 | 753 | 6.46e-116 | 363 |
| Msa0126290 | MtrunA17_Chr3g0126911 | 39.083 | 545 | 280 | 15 | 101 | 615 | 123 | 645 | 6.18e-111 | 347 |
| Msa0126290 | MtrunA17_Chr4g0051911 | 29.889 | 542 | 284 | 20 | 116 | 616 | 481 | 967 | 1.60e-51 | 192 |
| Msa0126290 | MtrunA17_Chr2g0288461 | 27.160 | 567 | 304 | 18 | 78 | 608 | 602 | 1095 | 2.01e-46 | 177 |
| Msa0126290 | MtrunA17_Chr5g0411441 | 22.667 | 450 | 298 | 14 | 104 | 536 | 178 | 594 | 3.27e-19 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126290 | AT1G32900.1 | 71.031 | 611 | 172 | 4 | 37 | 643 | 1 | 610 | 0.0 | 877 |
| Msa0126290 | AT3G01180.1 | 40.331 | 543 | 289 | 11 | 85 | 617 | 270 | 787 | 1.03e-113 | 359 |
| Msa0126290 | AT5G24300.2 | 36.748 | 615 | 334 | 14 | 26 | 615 | 57 | 641 | 1.86e-110 | 347 |
| Msa0126290 | AT5G24300.1 | 36.748 | 615 | 334 | 14 | 26 | 615 | 57 | 641 | 1.86e-110 | 347 |
| Msa0126290 | AT4G18240.1 | 29.795 | 537 | 285 | 19 | 115 | 612 | 540 | 1023 | 4.94e-53 | 197 |
| Msa0126290 | AT1G11720.1 | 29.038 | 551 | 299 | 15 | 85 | 608 | 545 | 1030 | 8.62e-53 | 196 |
| Msa0126290 | AT1G11720.2 | 29.038 | 551 | 299 | 15 | 85 | 608 | 597 | 1082 | 8.77e-53 | 196 |
Find 175 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGACTTGGTGATGTTCT+TGG | 0.252319 | 1_3:-55255485 | Msa0126290:CDS |
| TATATATATGTTGCTTAAAA+AGG | 0.254053 | 1_3:+55251526 | None:intergenic |
| GCAGAGTGCAGTAAGATTAT+AGG | 0.275918 | 1_3:-55251635 | Msa0126290:three_prime_UTR |
| AGTCTTGAGCCATGCAGTTC+TGG | 0.289019 | 1_3:+55252004 | None:intergenic |
| TATGCCAAGGAACTTGTTTC+CGG | 0.292552 | 1_3:-55253213 | Msa0126290:CDS |
| TGGTGGACTTCCACCTGTTT+TGG | 0.300685 | 1_3:-55255465 | Msa0126290:CDS |
| TGCAGGGACCAGCCAAACTA+TGG | 0.307764 | 1_3:-55251829 | Msa0126290:intron |
| GGGTGCATGCCTCAATTTCC+AGG | 0.341739 | 1_3:-55255747 | Msa0126290:CDS |
| GATTATCTCTTGCATGGCTT+GGG | 0.348471 | 1_3:+55252026 | None:intergenic |
| GGATTATCTCTTGCATGGCT+TGG | 0.348500 | 1_3:+55252025 | None:intergenic |
| TAATGTTCTGCAAATTTCAT+TGG | 0.359708 | 1_3:+55251496 | None:intergenic |
| ATTCATCAACTACGATTTAC+CGG | 0.361965 | 1_3:+55251600 | None:intergenic |
| GACAATATCATTCGTTCAAC+TGG | 0.368569 | 1_3:-55253168 | Msa0126290:CDS |
| AAACTCTATGGTCCTAAAAC+TGG | 0.369328 | 1_3:-55254650 | Msa0126290:CDS |
| AGTTCCAAGGTACAATGATT+AGG | 0.373220 | 1_3:+55251560 | None:intergenic |
| GGCAACGAACCTGGAATAGA+TGG | 0.380159 | 1_3:-55251776 | Msa0126290:CDS |
| GACAAGAGTATCCCTTTGAT+AGG | 0.395078 | 1_3:-55252912 | Msa0126290:CDS |
| GGAATGAATTTGGTGTTTGT+TGG | 0.396832 | 1_3:-55255536 | Msa0126290:CDS |
| ATCTCCTCTCCATCTATTCC+AGG | 0.397331 | 1_3:+55251767 | None:intergenic |
| CAATTACATGCCATGCCATA+TGG | 0.397832 | 1_3:-55252543 | Msa0126290:CDS |
| CATATCCTGGCAAGGCAATC+GGG | 0.403532 | 1_3:-55252659 | Msa0126290:CDS |
| TCGATGTATTTATCAGTTTG+TGG | 0.404855 | 1_3:+55253102 | None:intergenic |
| CCACAAGGCTCAAATCTACT+TGG | 0.408419 | 1_3:+55252573 | None:intergenic |
| TTGGCTCACAAAATAATTGC+TGG | 0.409575 | 1_3:-55252615 | Msa0126290:CDS |
| GAACTATTATCTGAACATTC+TGG | 0.409656 | 1_3:+55252820 | None:intergenic |
| AGAACACAGAGGTGTGGAAT+TGG | 0.412338 | 1_3:-55253190 | Msa0126290:CDS |
| CAGTGCGTTCTCCCATAGTT+TGG | 0.414595 | 1_3:+55251817 | None:intergenic |
| GTGCCCATCGTTTCATCAAC+TGG | 0.419733 | 1_3:-55252266 | Msa0126290:CDS |
| AGTGAATAAAGGTCTATTCC+AGG | 0.421292 | 1_3:-55251446 | Msa0126290:three_prime_UTR |
| GATAACTTATCTACATCATC+TGG | 0.425102 | 1_3:+55252084 | None:intergenic |
| TGATTACTCACCAGTGCTCC+TGG | 0.426710 | 1_3:+55255989 | None:intergenic |
| TGAAATCAATGTACAAGTCT+AGG | 0.429447 | 1_3:-55253676 | Msa0126290:CDS |
| TAGATTCAGCTTGTTATGTC+AGG | 0.430029 | 1_3:-55254603 | Msa0126290:intron |
| TTGCATGGCTTGGGTACCAT+AGG | 0.431090 | 1_3:+55252035 | None:intergenic |
| TGAAGGGAAGGAAAATCAAT+TGG | 0.431550 | 1_3:-55253287 | Msa0126290:CDS |
| ACATATCCTGGCAAGGCAAT+CGG | 0.432716 | 1_3:-55252660 | Msa0126290:CDS |
| CTTTGATAGGATTCATTGGC+AGG | 0.436538 | 1_3:-55252899 | Msa0126290:CDS |
| TAGTCTTCGTTGCCAATGAT+TGG | 0.437773 | 1_3:-55253724 | Msa0126290:CDS |
| GCCACTCCATGAGCATCAAT+AGG | 0.438764 | 1_3:-55251719 | Msa0126290:exon |
| AACCAGGCCTTTACTTATGT+TGG | 0.440617 | 1_3:-55255674 | Msa0126290:CDS |
| ATGAGTGAGAAGAGTGAGAG+TGG | 0.440650 | 1_3:-55255587 | Msa0126290:CDS |
| ATCCCTTTGATAGGATTCAT+TGG | 0.441198 | 1_3:-55252903 | Msa0126290:CDS |
| AATGCAGTCTAAGTGAATAA+AGG | 0.445544 | 1_3:-55251457 | Msa0126290:three_prime_UTR |
| AAGAGCAGTGTGCCAATCAT+TGG | 0.452656 | 1_3:+55253712 | None:intergenic |
| ACTGTGAAAGAAGGCTATAC+AGG | 0.454630 | 1_3:-55252230 | Msa0126290:CDS |
| AACAAACTTACAGCCAAAAC+AGG | 0.454783 | 1_3:+55255452 | None:intergenic |
| AACAGCAGCAAATATTTCTC+AGG | 0.455902 | 1_3:-55253861 | Msa0126290:CDS |
| GAAATCAATGTACAAGTCTA+GGG | 0.457571 | 1_3:-55253675 | Msa0126290:CDS |
| AGTGTGTGGTGGAATGAATT+TGG | 0.460839 | 1_3:-55255546 | Msa0126290:CDS |
| TTCCACACCTCTGTGTTCTC+CGG | 0.465353 | 1_3:+55253194 | None:intergenic |
| GCTACCCCGATTGCCTTGCC+AGG | 0.465671 | 1_3:+55252654 | None:intergenic |
| AACTATGAGGGGTTCTTCTG+TGG | 0.465840 | 1_3:-55255768 | Msa0126290:CDS |
| GCGTTCTCCCATAGTTTGGC+TGG | 0.466225 | 1_3:+55251821 | None:intergenic |
| AAAGGGATACTCTTGTCAAC+AGG | 0.467239 | 1_3:+55252918 | None:intergenic |
| CTCTTCTCATCATTGTTAGC+AGG | 0.467353 | 1_3:-55256020 | Msa0126290:CDS |
| ACATAATCATGGCAACTATG+AGG | 0.472184 | 1_3:-55255781 | Msa0126290:CDS |
| AGCAAAATTCAATGGCCCCT+TGG | 0.472444 | 1_3:-55252634 | Msa0126290:CDS |
| AAAGAGCTTCTGAATTCATC+AGG | 0.472676 | 1_3:+55253483 | None:intergenic |
| CTGTTTAAGTTCAAAACCCT+TGG | 0.474928 | 1_3:+55253879 | None:intergenic |
| CAGCTGGAGGTAACATATCC+TGG | 0.475441 | 1_3:-55252672 | Msa0126290:CDS |
| AAATATTTCTCAGGACCATA+TGG | 0.478714 | 1_3:-55253852 | Msa0126290:intron |
| GGAGAAGCAAATTGAGCAGC+TGG | 0.478845 | 1_3:-55252688 | Msa0126290:CDS |
| GAGGTCGCAGGCAACGAACC+TGG | 0.481045 | 1_3:-55251785 | Msa0126290:CDS |
| TACATTGATTTCAAGTAGCA+TGG | 0.483987 | 1_3:+55253686 | None:intergenic |
| AAGACCGAGTCAAAACTCTA+TGG | 0.484633 | 1_3:-55254662 | Msa0126290:CDS |
| CAAAATGTAGTAGGCCATGT+TGG | 0.485472 | 1_3:-55256081 | Msa0126290:exon |
| GTACCTTGGAACTTAGTTGA+AGG | 0.488096 | 1_3:-55251550 | Msa0126290:three_prime_UTR |
| CTGAAAAGGCGTGTCTTCCC+TGG | 0.489745 | 1_3:+55253526 | None:intergenic |
| AAAATCAATTGGATGAAGGC+TGG | 0.490353 | 1_3:-55253276 | Msa0126290:CDS |
| TATTCATAACATCGCCTACC+AGG | 0.491456 | 1_3:-55253544 | Msa0126290:CDS |
| GAAGCTCTTCAAGCTGAGGT+TGG | 0.493585 | 1_3:-55252945 | Msa0126290:CDS |
| TTCTCCGGAAACAAGTTCCT+TGG | 0.495791 | 1_3:+55253209 | None:intergenic |
| AAAATCGTTATCTAATACAT+GGG | 0.497803 | 1_3:-55251665 | Msa0126290:three_prime_UTR |
| GTTCTGGATTATCTCTTGCA+TGG | 0.498846 | 1_3:+55252020 | None:intergenic |
| CAACTTTCAGGCTGCACTTG+AGG | 0.499297 | 1_3:-55253904 | Msa0126290:intron |
| ATAAGCTCTACCGTTCCATA+TGG | 0.500986 | 1_3:+55252528 | None:intergenic |
| AAAGAAACTTTCAAATAACC+TGG | 0.501990 | 1_3:+55251428 | None:intergenic |
| GGCTGCACTTGAGGCACCAA+GGG | 0.505905 | 1_3:-55253895 | Msa0126290:CDS |
| CAGGTATACTACACCTGTGA+AGG | 0.511341 | 1_3:-55253304 | Msa0126290:CDS |
| TGGAGAGGAGATTGCTCCAC+TGG | 0.512116 | 1_3:-55251756 | Msa0126290:CDS |
| CATAATCATGGCAACTATGA+GGG | 0.512735 | 1_3:-55255780 | Msa0126290:CDS |
| ACTATGAGGGGTTCTTCTGT+GGG | 0.513464 | 1_3:-55255767 | Msa0126290:CDS |
| GTGTTTGTTGGAGCTGAAGT+TGG | 0.514248 | 1_3:-55255524 | Msa0126290:CDS |
| GGACTTGGTGATGTTCTTGG+TGG | 0.517016 | 1_3:-55255482 | Msa0126290:CDS |
| AGAAGAATTTGACATAATCA+TGG | 0.519378 | 1_3:-55255792 | Msa0126290:CDS |
| AAAATGTAGTAGGCCATGTT+GGG | 0.520389 | 1_3:-55256080 | Msa0126290:exon |
| AACCAACATAAGTAAAGGCC+TGG | 0.520467 | 1_3:+55255672 | None:intergenic |
| GGTATCACTGGTATCGTGAA+TGG | 0.523833 | 1_3:-55253147 | Msa0126290:CDS |
| TCTCAAACCAACATAAGTAA+AGG | 0.525128 | 1_3:+55255667 | None:intergenic |
| TTGGAGCTGAAGTTGGACCT+TGG | 0.526427 | 1_3:-55255517 | Msa0126290:CDS |
| TGCCAATGAATCCTATCAAA+GGG | 0.530139 | 1_3:+55252901 | None:intergenic |
| ATCGGGGTAGCAAAATTCAA+TGG | 0.530949 | 1_3:-55252642 | Msa0126290:CDS |
| ATTCGTTCAACTGGTATCAC+TGG | 0.533593 | 1_3:-55253159 | Msa0126290:CDS |
| TCCACGTGTCAAAATGTAGT+AGG | 0.534629 | 1_3:-55256090 | Msa0126290:five_prime_UTR |
| GAGAAGAGCGAAGTCTGAAA+AGG | 0.536104 | 1_3:+55253512 | None:intergenic |
| GGAGATTGCTCCACTGGCAA+AGG | 0.537895 | 1_3:-55251750 | Msa0126290:CDS |
| ATGATCAATACAAGGATGCA+TGG | 0.538053 | 1_3:-55255046 | Msa0126290:CDS |
| CTGTTGAGCCTCGAGGTCGC+AGG | 0.539159 | 1_3:-55251797 | Msa0126290:CDS |
| CCACTCCATGAGCATCAATA+GGG | 0.543596 | 1_3:-55251718 | Msa0126290:exon |
| GGTACACTCTCCAGGAGCAC+TGG | 0.543700 | 1_3:-55255999 | Msa0126290:intron |
| ACGAGAGCCCTTAAAACCTA+TGG | 0.543829 | 1_3:-55252051 | Msa0126290:CDS |
| TAATGACCGTATCTAAAATG+AGG | 0.547425 | 1_3:+55251691 | None:intergenic |
| TGTTAGCAGGTACACTCTCC+AGG | 0.551706 | 1_3:-55256007 | Msa0126290:CDS |
| TGTTTGTTGTAGCTCAAAGT+TGG | 0.552081 | 1_3:-55254904 | Msa0126290:intron |
| CTGCCAATGAATCCTATCAA+AGG | 0.556180 | 1_3:+55252900 | None:intergenic |
| CGCGATCAACTCCTCTCTTG+TGG | 0.556317 | 1_3:+55254848 | None:intergenic |
| TGGAGTAAGACTGGTGGACT+TGG | 0.556639 | 1_3:-55255497 | Msa0126290:CDS |
| GATATCCCTATTGATGCTCA+TGG | 0.558967 | 1_3:+55251713 | None:intergenic |
| TTCTTTCACTGCCACAAGAG+AGG | 0.559392 | 1_3:-55254859 | Msa0126290:CDS |
| CTCTCAACAAGCTGCACGTG+CGG | 0.562469 | 1_3:-55255643 | Msa0126290:CDS |
| ACAAGTTCCTTGGCATAATG+TGG | 0.565321 | 1_3:+55253219 | None:intergenic |
| AAGGAAAATCAATTGGATGA+AGG | 0.565800 | 1_3:-55253280 | Msa0126290:CDS |
| CACTGGTATCGTGAATGGCA+TGG | 0.566020 | 1_3:-55253142 | Msa0126290:CDS |
| GTTGACTTTGAATAATAACC+AGG | 0.573316 | 1_3:-55255690 | Msa0126290:CDS |
| CTCTACCGTTCCATATGGCA+TGG | 0.581372 | 1_3:+55252533 | None:intergenic |
| CTTGTTGACACTGTGAAAGA+AGG | 0.581668 | 1_3:-55252239 | Msa0126290:CDS |
| GCAGGGACCAGCCAAACTAT+GGG | 0.586907 | 1_3:-55251828 | Msa0126290:intron |
| ATACTACACCTGTGAAGGGA+AGG | 0.587286 | 1_3:-55253299 | Msa0126290:CDS |
| TGATCAATACAAGGATGCAT+GGG | 0.587857 | 1_3:-55255045 | Msa0126290:CDS |
| AAGGGGAAAATAGTGTGTGG+TGG | 0.588002 | 1_3:-55255557 | Msa0126290:CDS |
| CACAAGGCTCAAATCTACTT+GGG | 0.588006 | 1_3:+55252574 | None:intergenic |
| CCAAGTAGATTTGAGCCTTG+TGG | 0.590941 | 1_3:-55252573 | Msa0126290:CDS |
| GAAAGAAGCTCTTCAAGCTG+AGG | 0.591901 | 1_3:-55252949 | Msa0126290:CDS |
| GGAACCTAATCATTGTACCT+TGG | 0.592224 | 1_3:-55251564 | Msa0126290:three_prime_UTR |
| CCCTATTGATGCTCATGGAG+TGG | 0.595038 | 1_3:+55251718 | None:intergenic |
| GTTGGACCTTGGAGTAAGAC+TGG | 0.596664 | 1_3:-55255506 | Msa0126290:CDS |
| GGACCTTCAACTAAGTTCCA+AGG | 0.607693 | 1_3:+55251547 | None:intergenic |
| TTCCGGAGAACACAGAGGTG+TGG | 0.607835 | 1_3:-55253196 | Msa0126290:CDS |
| TCCACTGGCAAAGGAAAATG+TGG | 0.611171 | 1_3:-55251741 | Msa0126290:CDS |
| ACCACCAGTTGATGAAACGA+TGG | 0.611672 | 1_3:+55252262 | None:intergenic |
| AACTACGATTTACCGGCTTG+AGG | 0.611964 | 1_3:+55251607 | None:intergenic |
| AAGAAGAGTGTAACCCAACA+TGG | 0.614207 | 1_3:+55256067 | None:intergenic |
| GGCTATACAGGATTCCACGC+TGG | 0.615421 | 1_3:-55252218 | Msa0126290:CDS |
| AGGCTGCACTTGAGGCACCA+AGG | 0.615883 | 1_3:-55253896 | Msa0126290:CDS |
| TTGGAATATGAAAGGTGTGG+GGG | 0.621316 | 1_3:-55254685 | Msa0126290:intron |
| GGAGGTAACATATCCTGGCA+AGG | 0.628738 | 1_3:-55252667 | Msa0126290:CDS |
| AAAGGCGTGTCTTCCCTGGT+AGG | 0.630758 | 1_3:+55253530 | None:intergenic |
| CCACCAGTTGATGAAACGAT+GGG | 0.631976 | 1_3:+55252263 | None:intergenic |
| ACATGCCATGCCATATGGAA+CGG | 0.632375 | 1_3:-55252538 | Msa0126290:intron |
| ATAATCATGGCAACTATGAG+GGG | 0.633095 | 1_3:-55255779 | Msa0126290:CDS |
| AGGTATACTACACCTGTGAA+GGG | 0.634448 | 1_3:-55253303 | Msa0126290:CDS |
| GGTGCATGCCTCAATTTCCA+GGG | 0.635599 | 1_3:-55255746 | Msa0126290:CDS |
| TTATAGGCGTAGCCTCAAGC+CGG | 0.635841 | 1_3:-55251619 | Msa0126290:three_prime_UTR |
| ATATCCTGGCAAGGCAATCG+GGG | 0.636935 | 1_3:-55252658 | Msa0126290:CDS |
| CGCTGGAGCGTTCAACGTGG+AGG | 0.637600 | 1_3:-55252201 | Msa0126290:intron |
| ACCGCGTTATGATCAATACA+AGG | 0.637600 | 1_3:-55255054 | Msa0126290:CDS |
| AGAAGACGAAGCAGCACGTG+CGG | 0.638038 | 1_3:+55255616 | None:intergenic |
| GGCAGGCTAGAAGAGCAGAA+AGG | 0.639584 | 1_3:-55252882 | Msa0126290:CDS |
| GTTCGTTGCCTGCGACCTCG+AGG | 0.639956 | 1_3:+55251789 | None:intergenic |
| AAATCAATGTACAAGTCTAG+GGG | 0.641348 | 1_3:-55253674 | Msa0126290:CDS |
| AGTCCACCAGTCTTACTCCA+AGG | 0.645736 | 1_3:+55255500 | None:intergenic |
| CGAACCTGGAATAGATGGAG+AGG | 0.647618 | 1_3:-55251771 | Msa0126290:CDS |
| AAACTTACAGCCAAAACAGG+TGG | 0.650863 | 1_3:+55255455 | None:intergenic |
| CCCATCGTTTCATCAACTGG+TGG | 0.651767 | 1_3:-55252263 | Msa0126290:CDS |
| ACTTACAGTGAACACTCGGT+CGG | 0.652659 | 1_3:+55253242 | None:intergenic |
| ATTCATAACATCGCCTACCA+GGG | 0.655105 | 1_3:-55253543 | Msa0126290:CDS |
| GTGGACTTACAGTGAACACT+CGG | 0.656424 | 1_3:+55253238 | None:intergenic |
| AGAGATAATCCAGAACTGCA+TGG | 0.661718 | 1_3:-55252013 | Msa0126290:CDS |
| GAACGCACTGTTGAGCCTCG+AGG | 0.665022 | 1_3:-55251804 | Msa0126290:CDS |
| TGTAAGTCCACATTATGCCA+AGG | 0.667821 | 1_3:-55253226 | Msa0126290:CDS |
| TTTAAGGGGAAAATAGTGTG+TGG | 0.678632 | 1_3:-55255560 | Msa0126290:CDS |
| GAAGCAAATTGAGCAGCTGG+AGG | 0.687655 | 1_3:-55252685 | Msa0126290:CDS |
| CCACGTTGAACGCTCCAGCG+TGG | 0.696561 | 1_3:+55252204 | None:intergenic |
| TGTAATTGAACTAGACCACA+AGG | 0.698693 | 1_3:+55252558 | None:intergenic |
| TTTGGAATATGAAAGGTGTG+GGG | 0.705387 | 1_3:-55254686 | Msa0126290:intron |
| ATGGCATGGATAATCGTGAG+TGG | 0.706253 | 1_3:-55253128 | Msa0126290:CDS |
| AATCAATGTACAAGTCTAGG+GGG | 0.707090 | 1_3:-55253673 | Msa0126290:CDS |
| GGACCTTGGAGTAAGACTGG+TGG | 0.707930 | 1_3:-55255503 | Msa0126290:CDS |
| GGATACTGATGTGTCTGTCG+AGG | 0.708137 | 1_3:-55255024 | Msa0126290:intron |
| CCACGCTGGAGCGTTCAACG+TGG | 0.710739 | 1_3:-55252204 | Msa0126290:CDS |
| CTTGTTTCCGGAGAACACAG+AGG | 0.719349 | 1_3:-55253201 | Msa0126290:CDS |
| TCCTTGTATTGATCATAACG+CGG | 0.721750 | 1_3:+55255053 | None:intergenic |
| TGATGAATGAGTTCTAACGA+AGG | 0.732138 | 1_3:-55251585 | Msa0126290:three_prime_UTR |
| TAACAATGATGAGAAGAGTG+TGG | 0.736932 | 1_3:+55256025 | None:intergenic |
| GCGGTGATACAGTCATAACA+CGG | 0.782318 | 1_3:+55255072 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAATTAAATCATCAC+AGG | + | chr1_3:55252392-55252411 | None:intergenic | 15.0% |
| !!! | TGTGATGATTTAATTATTTT+AGG | - | chr1_3:55252391-55252410 | Msa0126290:intron | 15.0% |
| !!! | GTGATGATTTAATTATTTTA+GGG | - | chr1_3:55252392-55252411 | Msa0126290:intron | 15.0% |
| !!! | ATTTAATTATTTTAGGGAAA+TGG | - | chr1_3:55252398-55252417 | Msa0126290:intron | 15.0% |
| !!! | TTTAATTATTTTAGGGAAAT+GGG | - | chr1_3:55252399-55252418 | Msa0126290:intron | 15.0% |
| !! | ATTCAAATTCAATCTTATAA+AGG | + | chr1_3:55252755-55252774 | None:intergenic | 15.0% |
| !! | TAAACTAAAAGATTATAACT+TGG | - | chr1_3:55255362-55255381 | Msa0126290:intron | 15.0% |
| !! | AAACTAAAAGATTATAACTT+GGG | - | chr1_3:55255363-55255382 | Msa0126290:intron | 15.0% |
| !!! | TATATATATGTTGCTTAAAA+AGG | + | chr1_3:55255973-55255992 | None:intergenic | 15.0% |
| !! | CATCCATATGTTTAAATTTA+CGG | - | chr1_3:55252082-55252101 | Msa0126290:CDS | 20.0% |
| !! | GTATAATTCTTGAAAGAAAT+TGG | - | chr1_3:55252524-55252543 | Msa0126290:intron | 20.0% |
| !! | ATGTAAATAAATCATCAACA+AGG | + | chr1_3:55252557-55252576 | None:intergenic | 20.0% |
| !!! | ATTTAGTTTTCATCAATCAT+TGG | - | chr1_3:55252717-55252736 | Msa0126290:intron | 20.0% |
| !!! | GTTAAACTGACTTTATTTTT+TGG | - | chr1_3:55252785-55252804 | Msa0126290:intron | 20.0% |
| !! | AATACACAAAAGTTAATAGA+GGG | + | chr1_3:55252957-55252976 | None:intergenic | 20.0% |
| !! | AAATACACAAAAGTTAATAG+AGG | + | chr1_3:55252958-55252977 | None:intergenic | 20.0% |
| !!! | CTATTAACTTTTGTGTATTT+TGG | - | chr1_3:55252958-55252977 | Msa0126290:CDS | 20.0% |
| !!! | AGAATTGATTTTGATTTGTT+TGG | - | chr1_3:55253018-55253037 | Msa0126290:intron | 20.0% |
| !! | ATTGTAAAGTGATTTATGTT+TGG | + | chr1_3:55253138-55253157 | None:intergenic | 20.0% |
| !!! | ATTCATGTTTTTTTTACTTC+AGG | - | chr1_3:55254766-55254785 | Msa0126290:intron | 20.0% |
| !!! | TTCATGTTTTTTTTACTTCA+GGG | - | chr1_3:55254767-55254786 | Msa0126290:intron | 20.0% |
| !!! | AATTTGAAATGGCAAATAAA+AGG | + | chr1_3:55254995-55255014 | None:intergenic | 20.0% |
| !! | AAAAATCGTTATCTAATACA+TGG | - | chr1_3:55255830-55255849 | Msa0126290:intron | 20.0% |
| !! | AAAATCGTTATCTAATACAT+GGG | - | chr1_3:55255831-55255850 | Msa0126290:intron | 20.0% |
| ! | ATAATAGTATATGTGACAGA+AGG | + | chr1_3:55251639-55251658 | None:intergenic | 25.0% |
| !!! | TCCAACTATGTTGATAATTT+TGG | - | chr1_3:55251662-55251681 | Msa0126290:three_prime_UTR | 25.0% |
| ! | ACCAAAATTATCAACATAGT+TGG | + | chr1_3:55251666-55251685 | None:intergenic | 25.0% |
| ! | AGAAGAATTTGACATAATCA+TGG | - | chr1_3:55251704-55251723 | Msa0126290:three_prime_UTR | 25.0% |
| !! | ATAGAAATACAACCTTTTCA+AGG | + | chr1_3:55252696-55252715 | None:intergenic | 25.0% |
| !!! | TGACTTTATTTTTTGGCATT+TGG | - | chr1_3:55252792-55252811 | Msa0126290:intron | 25.0% |
| !! | TTATAATCAGTTCCAGTTTT+AGG | + | chr1_3:55252861-55252880 | None:intergenic | 25.0% |
| !!! | TTCTTGAGTACAATTGATTT+TGG | - | chr1_3:55253044-55253063 | Msa0126290:intron | 25.0% |
| !! | TTGCTTCAACTATTGAATTT+TGG | - | chr1_3:55253072-55253091 | Msa0126290:intron | 25.0% |
| !! | AGTCATGTATTTCAATTTTC+AGG | - | chr1_3:55253399-55253418 | Msa0126290:intron | 25.0% |
| ! | AAAACACAAATCTTAGTCTA+GGG | + | chr1_3:55253438-55253457 | None:intergenic | 25.0% |
| ! | TATATGATGATTGATGAGAT+TGG | - | chr1_3:55253481-55253500 | Msa0126290:CDS | 25.0% |
| ! | AGATATGAACATTATCAATG+TGG | - | chr1_3:55253565-55253584 | Msa0126290:intron | 25.0% |
| ! | GAAATCTATTTAGCATAAGA+AGG | - | chr1_3:55253893-55253912 | Msa0126290:CDS | 25.0% |
| !! | AATGTTCTAATGTGATTTGT+AGG | + | chr1_3:55254072-55254091 | None:intergenic | 25.0% |
| ! | TACAAATCACATTAGAACAT+TGG | - | chr1_3:55254071-55254090 | Msa0126290:intron | 25.0% |
| !!! | TTTTGTTTTGTTTCCTTTTC+AGG | - | chr1_3:55254173-55254192 | Msa0126290:intron | 25.0% |
| !!! | TCATCAAAACTGTCATTTTT+AGG | - | chr1_3:55254502-55254521 | Msa0126290:intron | 25.0% |
| !!! | TAATTAGCATAGCTTTGTTT+AGG | + | chr1_3:55254747-55254766 | None:intergenic | 25.0% |
| ! | CAGGAAATTCAAATTTGAAA+TGG | + | chr1_3:55255006-55255025 | None:intergenic | 25.0% |
| ! | TAATGTTCTGCAAATTTCAT+TGG | + | chr1_3:55256003-55256022 | None:intergenic | 25.0% |
| ! | AAAGAAACTTTCAAATAACC+TGG | + | chr1_3:55256071-55256090 | None:intergenic | 25.0% |
| ! | GTTGACTTTGAATAATAACC+AGG | - | chr1_3:55251806-55251825 | Msa0126290:CDS | 30.0% |
| TCTCAAACCAACATAAGTAA+AGG | + | chr1_3:55251832-55251851 | None:intergenic | 30.0% | |
| ! | AGTGAGAGTGGAAATTTTAA+GGG | - | chr1_3:55251921-55251940 | Msa0126290:intron | 30.0% |
| CCACCGTAAATTTAAACATA+TGG | + | chr1_3:55252088-55252107 | None:intergenic | 30.0% | |
| CCATATGTTTAAATTTACGG+TGG | - | chr1_3:55252085-55252104 | Msa0126290:CDS | 30.0% | |
| ! | TTTGGCATTTGGAATATGAA+AGG | - | chr1_3:55252803-55252822 | Msa0126290:intron | 30.0% |
| ! | ATTTGGAATATGAAAGGTGT+GGG | - | chr1_3:55252809-55252828 | Msa0126290:intron | 30.0% |
| GGATAAATTCATGCAAAAGT+GGG | + | chr1_3:55253117-55253136 | None:intergenic | 30.0% | |
| TGGATAAATTCATGCAAAAG+TGG | + | chr1_3:55253118-55253137 | None:intergenic | 30.0% | |
| !! | TAATTAACGAGCTTTGAGTT+TGG | + | chr1_3:55253226-55253245 | None:intergenic | 30.0% |
| CAAAGCTCGTTAATTACTAT+TGG | - | chr1_3:55253230-55253249 | Msa0126290:CDS | 30.0% | |
| CCAATAATAAGTGAATGACT+GGG | - | chr1_3:55253276-55253295 | Msa0126290:CDS | 30.0% | |
| ! | AATCACAGTATTTGCTCTTT+TGG | - | chr1_3:55253338-55253357 | Msa0126290:intron | 30.0% |
| CAAAACACAAATCTTAGTCT+AGG | + | chr1_3:55253439-55253458 | None:intergenic | 30.0% | |
| ! | CATATCTAGAGTCAGTATAA+AGG | + | chr1_3:55253552-55253571 | None:intergenic | 30.0% |
| AAATATTTCTCAGGACCATA+TGG | - | chr1_3:55253644-55253663 | Msa0126290:intron | 30.0% | |
| !! | TACATTGATTTCAAGTAGCA+TGG | + | chr1_3:55253813-55253832 | None:intergenic | 30.0% |
| TGAAATCAATGTACAAGTCT+AGG | - | chr1_3:55253820-55253839 | Msa0126290:intron | 30.0% | |
| GAAATCAATGTACAAGTCTA+GGG | - | chr1_3:55253821-55253840 | Msa0126290:intron | 30.0% | |
| AAATCAATGTACAAGTCTAG+GGG | - | chr1_3:55253822-55253841 | Msa0126290:intron | 30.0% | |
| !! | GTGAGGATTTGTTTACTTTT+CGG | - | chr1_3:55253864-55253883 | Msa0126290:CDS | 30.0% |
| !! | TGAGGATTTGTTTACTTTTC+GGG | - | chr1_3:55253865-55253884 | Msa0126290:CDS | 30.0% |
| ACTTTCTTTGTAATCATCAC+AGG | - | chr1_3:55253919-55253938 | Msa0126290:intron | 30.0% | |
| !!! | AGCTCTTTTGACTTTATTGA+TGG | - | chr1_3:55254028-55254047 | Msa0126290:intron | 30.0% |
| !!! | GCTCTTTTGACTTTATTGAT+GGG | - | chr1_3:55254029-55254048 | Msa0126290:intron | 30.0% |
| ! | CTTTATTGATGGGTATGATA+CGG | - | chr1_3:55254039-55254058 | Msa0126290:intron | 30.0% |
| AAGGAAAATCAATTGGATGA+AGG | - | chr1_3:55254216-55254235 | Msa0126290:intron | 30.0% | |
| TCGATGTATTTATCAGTTTG+TGG | + | chr1_3:55254397-55254416 | None:intergenic | 30.0% | |
| GAACTATTATCTGAACATTC+TGG | + | chr1_3:55254679-55254698 | None:intergenic | 30.0% | |
| TTAGGTAATAGGATCAGAAA+AGG | + | chr1_3:55254729-55254748 | None:intergenic | 30.0% | |
| !! | CATAGCTTTGTTTAGGTAAT+AGG | + | chr1_3:55254740-55254759 | None:intergenic | 30.0% |
| !!! | TTTTTTTTACTTCAGGGAAC+CGG | - | chr1_3:55254773-55254792 | Msa0126290:intron | 30.0% |
| ! | ATCTTTTAGACCTGATTTAC+TGG | - | chr1_3:55255087-55255106 | Msa0126290:intron | 30.0% |
| TGATTTACTGGTCATAAAGT+GGG | - | chr1_3:55255099-55255118 | Msa0126290:intron | 30.0% | |
| GTCAAGATGAAATGTAGTTA+TGG | + | chr1_3:55255178-55255197 | None:intergenic | 30.0% | |
| CATTTATGTTAGGAACATCA+AGG | + | chr1_3:55255200-55255219 | None:intergenic | 30.0% | |
| CTGTTTCAAGCATTTATGTT+AGG | + | chr1_3:55255210-55255229 | None:intergenic | 30.0% | |
| CTAACATAAATGCTTGAAAC+AGG | - | chr1_3:55255208-55255227 | Msa0126290:intron | 30.0% | |
| GATAACTTATCTACATCATC+TGG | + | chr1_3:55255415-55255434 | None:intergenic | 30.0% | |
| TAAGATGTTTACACCTCTAT+AGG | - | chr1_3:55255580-55255599 | Msa0126290:CDS | 30.0% | |
| TTCATTATTCATGCCTATAG+AGG | + | chr1_3:55255596-55255615 | None:intergenic | 30.0% | |
| ! | GGATATCCTCATTTTAGATA+CGG | - | chr1_3:55255799-55255818 | Msa0126290:intron | 30.0% |
| ! | TAATGACCGTATCTAAAATG+AGG | + | chr1_3:55255808-55255827 | None:intergenic | 30.0% |
| ATTCATCAACTACGATTTAC+CGG | + | chr1_3:55255899-55255918 | None:intergenic | 30.0% | |
| AATGCAGTCTAAGTGAATAA+AGG | - | chr1_3:55256039-55256058 | Msa0126290:CDS | 30.0% | |
| AAAATGTAGTAGGCCATGTT+GGG | - | chr1_3:55251416-55251435 | Msa0126290:three_prime_UTR | 35.0% | |
| !! | AAGAGTGTGGTATTTTGTAG+TGG | + | chr1_3:55251461-55251480 | None:intergenic | 35.0% |
| TAACAATGATGAGAAGAGTG+TGG | + | chr1_3:55251474-55251493 | None:intergenic | 35.0% | |
| ACATAATCATGGCAACTATG+AGG | - | chr1_3:55251715-55251734 | Msa0126290:exon | 35.0% | |
| CATAATCATGGCAACTATGA+GGG | - | chr1_3:55251716-55251735 | Msa0126290:exon | 35.0% | |
| ATAATCATGGCAACTATGAG+GGG | - | chr1_3:55251717-55251736 | Msa0126290:exon | 35.0% | |
| ! | GAGTGAGAGTGGAAATTTTA+AGG | - | chr1_3:55251920-55251939 | Msa0126290:intron | 35.0% |
| ! | GTGAGAGTGGAAATTTTAAG+GGG | - | chr1_3:55251922-55251941 | Msa0126290:intron | 35.0% |
| TTTAAGGGGAAAATAGTGTG+TGG | - | chr1_3:55251936-55251955 | Msa0126290:intron | 35.0% | |
| !! | GGAATGAATTTGGTGTTTGT+TGG | - | chr1_3:55251960-55251979 | Msa0126290:intron | 35.0% |
| AACAAACTTACAGCCAAAAC+AGG | + | chr1_3:55252047-55252066 | None:intergenic | 35.0% | |
| ATTTACTGCGAATACATGCA+TGG | - | chr1_3:55252185-55252204 | Msa0126290:intron | 35.0% | |
| ! | TCCTTGTATTGATCATAACG+CGG | + | chr1_3:55252446-55252465 | None:intergenic | 35.0% |
| ATGATCAATACAAGGATGCA+TGG | - | chr1_3:55252450-55252469 | Msa0126290:intron | 35.0% | |
| TGATCAATACAAGGATGCAT+GGG | - | chr1_3:55252451-55252470 | Msa0126290:intron | 35.0% | |
| !! | TGTTTGTTGTAGCTCAAAGT+TGG | - | chr1_3:55252592-55252611 | Msa0126290:CDS | 35.0% |
| !! | CAACCTTTTCAAGGAAAAGT+GGG | + | chr1_3:55252687-55252706 | None:intergenic | 35.0% |
| !! | ACAACCTTTTCAAGGAAAAG+TGG | + | chr1_3:55252688-55252707 | None:intergenic | 35.0% |
| ! | CATTTGGAATATGAAAGGTG+TGG | - | chr1_3:55252808-55252827 | Msa0126290:intron | 35.0% |
| ! | TTTGGAATATGAAAGGTGTG+GGG | - | chr1_3:55252810-55252829 | Msa0126290:intron | 35.0% |
| AAACTCTATGGTCCTAAAAC+TGG | - | chr1_3:55252846-55252865 | Msa0126290:CDS | 35.0% | |
| !! | TAGATTCAGCTTGTTATGTC+AGG | - | chr1_3:55252893-55252912 | Msa0126290:CDS | 35.0% |
| !!! | TGTGTATTTTGGTTCCACTT+TGG | - | chr1_3:55252969-55252988 | Msa0126290:CDS | 35.0% |
| GCTATAATCACGATTTGTGA+AGG | + | chr1_3:55253257-55253276 | None:intergenic | 35.0% | |
| GCCAATAATAAGTGAATGAC+TGG | - | chr1_3:55253275-55253294 | Msa0126290:CDS | 35.0% | |
| CCCAGTCATTCACTTATTAT+TGG | + | chr1_3:55253279-55253298 | None:intergenic | 35.0% | |
| GACTTCTACTCAATTGTTTG+AGG | + | chr1_3:55253383-55253402 | None:intergenic | 35.0% | |
| CAATGTGGTTAACAACTTTC+AGG | - | chr1_3:55253580-55253599 | Msa0126290:intron | 35.0% | |
| ! | CTGTTTAAGTTCAAAACCCT+TGG | + | chr1_3:55253620-55253639 | None:intergenic | 35.0% |
| AACAGCAGCAAATATTTCTC+AGG | - | chr1_3:55253635-55253654 | Msa0126290:intron | 35.0% | |
| !!! | ACTTTTTTATGTCTTCTCGC+AGG | - | chr1_3:55253741-55253760 | Msa0126290:intron | 35.0% |
| AATCAATGTACAAGTCTAGG+GGG | - | chr1_3:55253823-55253842 | Msa0126290:intron | 35.0% | |
| TTTACAAAAACGCAAAGGTG+AGG | - | chr1_3:55253847-55253866 | Msa0126290:intron | 35.0% | |
| AAAGAGCTTCTGAATTCATC+AGG | + | chr1_3:55254016-55254035 | None:intergenic | 35.0% | |
| ! | GTTCTAATGTGATTTGTAGG+AGG | + | chr1_3:55254069-55254088 | None:intergenic | 35.0% |
| TATCATACCTGAAAAGGCAA+TGG | + | chr1_3:55254121-55254140 | None:intergenic | 35.0% | |
| !!! | TTGCCTTTTCAGGTATGATA+CGG | - | chr1_3:55254121-55254140 | Msa0126290:intron | 35.0% |
| TAACCGTATCATACCTGAAA+AGG | + | chr1_3:55254127-55254146 | None:intergenic | 35.0% | |
| TGAAGGGAAGGAAAATCAAT+TGG | - | chr1_3:55254209-55254228 | Msa0126290:intron | 35.0% | |
| AAAATCAATTGGATGAAGGC+TGG | - | chr1_3:55254220-55254239 | Msa0126290:intron | 35.0% | |
| GACAATATCATTCGTTCAAC+TGG | - | chr1_3:55254328-55254347 | Msa0126290:intron | 35.0% | |
| ATGAGGAATCCACATTAAAC+AGG | + | chr1_3:55254456-55254475 | None:intergenic | 35.0% | |
| !! | ATGACAGTTTTGATGAGCAT+GGG | + | chr1_3:55254498-55254517 | None:intergenic | 35.0% |
| !! | AATGACAGTTTTGATGAGCA+TGG | + | chr1_3:55254499-55254518 | None:intergenic | 35.0% |
| ATCCCTTTGATAGGATTCAT+TGG | - | chr1_3:55254593-55254612 | Msa0126290:intron | 35.0% | |
| TGCCAATGAATCCTATCAAA+GGG | + | chr1_3:55254598-55254617 | None:intergenic | 35.0% | |
| !! | CAATTATTTTGTGAGCCAAG+GGG | + | chr1_3:55254880-55254899 | None:intergenic | 35.0% |
| !! | GCAATTATTTTGTGAGCCAA+GGG | + | chr1_3:55254881-55254900 | None:intergenic | 35.0% |
| !! | AGCAATTATTTTGTGAGCCA+AGG | + | chr1_3:55254882-55254901 | None:intergenic | 35.0% |
| TTGGCTCACAAAATAATTGC+TGG | - | chr1_3:55254881-55254900 | Msa0126290:CDS | 35.0% | |
| TGTAATTGAACTAGACCACA+AGG | + | chr1_3:55254941-55254960 | None:intergenic | 35.0% | |
| ! | AATCACTCAGTATGATTTGC+AGG | + | chr1_3:55255025-55255044 | None:intergenic | 35.0% |
| TCACACTGAGTGATCTAAAT+TGG | - | chr1_3:55255048-55255067 | Msa0126290:CDS | 35.0% | |
| ACTGAGTGATCTAAATTGGA+TGG | - | chr1_3:55255052-55255071 | Msa0126290:CDS | 35.0% | |
| CACTTTATGACCAGTAAATC+AGG | + | chr1_3:55255100-55255119 | None:intergenic | 35.0% | |
| CTGATTTACTGGTCATAAAG+TGG | - | chr1_3:55255098-55255117 | Msa0126290:intron | 35.0% | |
| !!! | TGATGTTTTGATTGTGTGAC+TGG | - | chr1_3:55255138-55255157 | Msa0126290:intron | 35.0% |
| !! | TTGGGTACCATAGGTTTTAA+GGG | + | chr1_3:55255455-55255474 | None:intergenic | 35.0% |
| AAAGTTTGATACAGCAACAG+CGG | + | chr1_3:55255541-55255560 | None:intergenic | 35.0% | |
| CAGTTCAGCTAATCATCAAT+GGG | - | chr1_3:55255634-55255653 | Msa0126290:CDS | 35.0% | |
| AATGGGTGATTTCTAATGCA+GGG | - | chr1_3:55255651-55255670 | Msa0126290:CDS | 35.0% | |
| ! | TGATGAATGAGTTCTAACGA+AGG | - | chr1_3:55255911-55255930 | Msa0126290:intron | 35.0% |
| AGTTCCAAGGTACAATGATT+AGG | + | chr1_3:55255939-55255958 | None:intergenic | 35.0% | |
| AGTGAATAAAGGTCTATTCC+AGG | - | chr1_3:55256050-55256069 | Msa0126290:CDS | 35.0% | |
| TCCACGTGTCAAAATGTAGT+AGG | - | chr1_3:55251406-55251425 | Msa0126290:three_prime_UTR | 40.0% | |
| CAAAATGTAGTAGGCCATGT+TGG | - | chr1_3:55251415-55251434 | Msa0126290:three_prime_UTR | 40.0% | |
| ! | AAGAAGAGTGTAACCCAACA+TGG | + | chr1_3:55251432-55251451 | None:intergenic | 40.0% |
| CTCTTCTCATCATTGTTAGC+AGG | - | chr1_3:55251476-55251495 | Msa0126290:three_prime_UTR | 40.0% | |
| CAGATGAATCGAAACGACAA+GGG | + | chr1_3:55251602-55251621 | None:intergenic | 40.0% | |
| ! | CTTTTCTTCCCTGGAAATTG+AGG | + | chr1_3:55251761-55251780 | None:intergenic | 40.0% |
| AACCAGGCCTTTACTTATGT+TGG | - | chr1_3:55251822-55251841 | Msa0126290:CDS | 40.0% | |
| AACCAACATAAGTAAAGGCC+TGG | + | chr1_3:55251827-55251846 | None:intergenic | 40.0% | |
| ! | AGTGTGTGGTGGAATGAATT+TGG | - | chr1_3:55251950-55251969 | Msa0126290:intron | 40.0% |
| AAACTTACAGCCAAAACAGG+TGG | + | chr1_3:55252044-55252063 | None:intergenic | 40.0% | |
| AATGTAATCACGCGTGTTTG+TGG | - | chr1_3:55252273-55252292 | Msa0126290:intron | 40.0% | |
| ACCGCGTTATGATCAATACA+AGG | - | chr1_3:55252442-55252461 | Msa0126290:intron | 40.0% | |
| !! | TCACCCACTTTTCCTTGAAA+AGG | - | chr1_3:55252681-55252700 | Msa0126290:CDS | 40.0% |
| ! | TTGGAATATGAAAGGTGTGG+GGG | - | chr1_3:55252811-55252830 | Msa0126290:intron | 40.0% |
| AAGACCGAGTCAAAACTCTA+TGG | - | chr1_3:55252834-55252853 | Msa0126290:CDS | 40.0% | |
| !!! | AGGACCATAGAGTTTTGACT+CGG | + | chr1_3:55252841-55252860 | None:intergenic | 40.0% |
| AATAGAGGGTAAAGCAACAC+AGG | + | chr1_3:55252943-55252962 | None:intergenic | 40.0% | |
| !!! | GTATTTTGGTTCCACTTTGG+AGG | - | chr1_3:55252972-55252991 | Msa0126290:CDS | 40.0% |
| TCAGTTTGAATCCTCCAAAG+TGG | + | chr1_3:55252986-55253005 | None:intergenic | 40.0% | |
| !! | GAGCTTTGAGTTTGGTTATG+CGG | + | chr1_3:55253218-55253237 | None:intergenic | 40.0% |
| ! | GTGATAGTGATTCAGATGAC+AGG | + | chr1_3:55253317-55253336 | None:intergenic | 40.0% |
| TAGTCTTCGTTGCCAATGAT+TGG | - | chr1_3:55253772-55253791 | Msa0126290:intron | 40.0% | |
| TATTCATAACATCGCCTACC+AGG | - | chr1_3:55253952-55253971 | Msa0126290:intron | 40.0% | |
| ATTCATAACATCGCCTACCA+GGG | - | chr1_3:55253953-55253972 | Msa0126290:intron | 40.0% | |
| ! | TCAGTTACCATTGCCTTTTC+AGG | - | chr1_3:55254111-55254130 | Msa0126290:intron | 40.0% |
| !! | ATGCACTCGCGATTTTTAGA+AGG | + | chr1_3:55254151-55254170 | None:intergenic | 40.0% |
| CAGGTGTAGTATACCTGAAA+AGG | + | chr1_3:55254189-55254208 | None:intergenic | 40.0% | |
| AGGTATACTACACCTGTGAA+GGG | - | chr1_3:55254193-55254212 | Msa0126290:intron | 40.0% | |
| ! | TTGATTTTCCTTCCCTTCAC+AGG | + | chr1_3:55254208-55254227 | None:intergenic | 40.0% |
| TGTAAGTCCACATTATGCCA+AGG | - | chr1_3:55254270-55254289 | Msa0126290:intron | 40.0% | |
| ACAAGTTCCTTGGCATAATG+TGG | + | chr1_3:55254280-55254299 | None:intergenic | 40.0% | |
| ! | TATGCCAAGGAACTTGTTTC+CGG | - | chr1_3:55254283-55254302 | Msa0126290:intron | 40.0% |
| ATTCGTTCAACTGGTATCAC+TGG | - | chr1_3:55254337-55254356 | Msa0126290:intron | 40.0% | |
| TAGCACCTTCCTGTTTAATG+TGG | - | chr1_3:55254444-55254463 | Msa0126290:intron | 40.0% | |
| GGAATCCACATTAAACAGGA+AGG | + | chr1_3:55254452-55254471 | None:intergenic | 40.0% | |
| TGTGGATTCCTCATTTGACA+TGG | - | chr1_3:55254462-55254481 | Msa0126290:intron | 40.0% | |
| TCAATGGTCCATGTCAAATG+AGG | + | chr1_3:55254473-55254492 | None:intergenic | 40.0% | |
| TTGATGAGCATGGGTTTCAA+TGG | + | chr1_3:55254489-55254508 | None:intergenic | 40.0% | |
| AAAGGGATACTCTTGTCAAC+AGG | + | chr1_3:55254581-55254600 | None:intergenic | 40.0% | |
| !! | GACAAGAGTATCCCTTTGAT+AGG | - | chr1_3:55254584-55254603 | Msa0126290:intron | 40.0% |
| CTGCCAATGAATCCTATCAA+AGG | + | chr1_3:55254599-55254618 | None:intergenic | 40.0% | |
| CTTTGATAGGATTCATTGGC+AGG | - | chr1_3:55254597-55254616 | Msa0126290:intron | 40.0% | |
| ! | CTTCTCCATGATCTTTTTGC+CGG | + | chr1_3:55254795-55254814 | None:intergenic | 40.0% |
| ATCGGGGTAGCAAAATTCAA+TGG | - | chr1_3:55254854-55254873 | Msa0126290:CDS | 40.0% | |
| CACAAGGCTCAAATCTACTT+GGG | + | chr1_3:55254925-55254944 | None:intergenic | 40.0% | |
| CAATTACATGCCATGCCATA+TGG | - | chr1_3:55254953-55254972 | Msa0126290:intron | 40.0% | |
| ATAAGCTCTACCGTTCCATA+TGG | + | chr1_3:55254971-55254990 | None:intergenic | 40.0% | |
| CTTGTTGACACTGTGAAAGA+AGG | - | chr1_3:55255257-55255276 | Msa0126290:intron | 40.0% | |
| ACTGTGAAAGAAGGCTATAC+AGG | - | chr1_3:55255266-55255285 | Msa0126290:intron | 40.0% | |
| AACGTGGAGGTAAGAAGATA+TGG | - | chr1_3:55255308-55255327 | Msa0126290:intron | 40.0% | |
| ! | CTTGGGTACCATAGGTTTTA+AGG | + | chr1_3:55255456-55255475 | None:intergenic | 40.0% |
| GATTATCTCTTGCATGGCTT+GGG | + | chr1_3:55255473-55255492 | None:intergenic | 40.0% | |
| ! | GTTCTGGATTATCTCTTGCA+TGG | + | chr1_3:55255479-55255498 | None:intergenic | 40.0% |
| AGAGATAATCCAGAACTGCA+TGG | - | chr1_3:55255483-55255502 | Msa0126290:CDS | 40.0% | |
| GCAGTTCAGCTAATCATCAA+TGG | - | chr1_3:55255633-55255652 | Msa0126290:CDS | 40.0% | |
| CAATGGGTGATTTCTAATGC+AGG | - | chr1_3:55255650-55255669 | Msa0126290:CDS | 40.0% | |
| GATATCCCTATTGATGCTCA+TGG | + | chr1_3:55255786-55255805 | None:intergenic | 40.0% | |
| GCAGAGTGCAGTAAGATTAT+AGG | - | chr1_3:55255861-55255880 | Msa0126290:intron | 40.0% | |
| GGAACCTAATCATTGTACCT+TGG | - | chr1_3:55255932-55255951 | Msa0126290:intron | 40.0% | |
| GTACCTTGGAACTTAGTTGA+AGG | - | chr1_3:55255946-55255965 | Msa0126290:intron | 40.0% | |
| !! | GCCTACTACATTTTGACACG+TGG | + | chr1_3:55251410-55251429 | None:intergenic | 45.0% |
| GCAGATGAATCGAAACGACA+AGG | + | chr1_3:55251603-55251622 | None:intergenic | 45.0% | |
| AACTATGAGGGGTTCTTCTG+TGG | - | chr1_3:55251728-55251747 | Msa0126290:exon | 45.0% | |
| ACTATGAGGGGTTCTTCTGT+GGG | - | chr1_3:55251729-55251748 | Msa0126290:exon | 45.0% | |
| !! | TAGTCTCTGCTTTTCTTCCC+TGG | + | chr1_3:55251770-55251789 | None:intergenic | 45.0% |
| ATGAGTGAGAAGAGTGAGAG+TGG | - | chr1_3:55251909-55251928 | Msa0126290:intron | 45.0% | |
| AAGGGGAAAATAGTGTGTGG+TGG | - | chr1_3:55251939-55251958 | Msa0126290:intron | 45.0% | |
| ! | GTGTTTGTTGGAGCTGAAGT+TGG | - | chr1_3:55251972-55251991 | Msa0126290:intron | 45.0% |
| GCGAATACATGCATGGACAT+CGG | - | chr1_3:55252192-55252211 | Msa0126290:intron | 45.0% | |
| GCGGTGATACAGTCATAACA+CGG | + | chr1_3:55252427-55252446 | None:intergenic | 45.0% | |
| TTCTTTCACTGCCACAAGAG+AGG | - | chr1_3:55252637-55252656 | Msa0126290:CDS | 45.0% | |
| !! | AGGAGTTGATCGCGTTTTTG+TGG | - | chr1_3:55252657-55252676 | Msa0126290:CDS | 45.0% |
| TTTCTCAGGACCATATGGTG+TGG | - | chr1_3:55253649-55253668 | Msa0126290:intron | 45.0% | |
| AAGAGCAGTGTGCCAATCAT+TGG | + | chr1_3:55253787-55253806 | None:intergenic | 45.0% | |
| GGGGCTTTACAAAAACGCAA+AGG | - | chr1_3:55253842-55253861 | Msa0126290:intron | 45.0% | |
| GAGAAGAGCGAAGTCTGAAA+AGG | + | chr1_3:55253987-55254006 | None:intergenic | 45.0% | |
| CAGGTATACTACACCTGTGA+AGG | - | chr1_3:55254192-55254211 | Msa0126290:intron | 45.0% | |
| ATACTACACCTGTGAAGGGA+AGG | - | chr1_3:55254197-55254216 | Msa0126290:intron | 45.0% | |
| ACTTACAGTGAACACTCGGT+CGG | + | chr1_3:55254257-55254276 | None:intergenic | 45.0% | |
| GTGGACTTACAGTGAACACT+CGG | + | chr1_3:55254261-55254280 | None:intergenic | 45.0% | |
| TTCTCCGGAAACAAGTTCCT+TGG | + | chr1_3:55254290-55254309 | None:intergenic | 45.0% | |
| ! | AGAACACAGAGGTGTGGAAT+TGG | - | chr1_3:55254306-55254325 | Msa0126290:intron | 45.0% |
| GGTATCACTGGTATCGTGAA+TGG | - | chr1_3:55254349-55254368 | Msa0126290:intron | 45.0% | |
| ATGGCATGGATAATCGTGAG+TGG | - | chr1_3:55254368-55254387 | Msa0126290:intron | 45.0% | |
| GAAAGAAGCTCTTCAAGCTG+AGG | - | chr1_3:55254547-55254566 | Msa0126290:intron | 45.0% | |
| ACATATCCTGGCAAGGCAAT+CGG | - | chr1_3:55254836-55254855 | Msa0126290:CDS | 45.0% | |
| AGCAAAATTCAATGGCCCCT+TGG | - | chr1_3:55254862-55254881 | Msa0126290:CDS | 45.0% | |
| CCACAAGGCTCAAATCTACT+TGG | + | chr1_3:55254926-55254945 | None:intergenic | 45.0% | |
| CCAAGTAGATTTGAGCCTTG+TGG | - | chr1_3:55254923-55254942 | Msa0126290:intron | 45.0% | |
| ACATGCCATGCCATATGGAA+CGG | - | chr1_3:55254958-55254977 | Msa0126290:intron | 45.0% | |
| !! | CCACCAGTTGATGAAACGAT+GGG | + | chr1_3:55255236-55255255 | None:intergenic | 45.0% |
| !! | ACCACCAGTTGATGAAACGA+TGG | + | chr1_3:55255237-55255256 | None:intergenic | 45.0% |
| ACGAGAGCCCTTAAAACCTA+TGG | - | chr1_3:55255445-55255464 | Msa0126290:intron | 45.0% | |
| GGATTATCTCTTGCATGGCT+TGG | + | chr1_3:55255474-55255493 | None:intergenic | 45.0% | |
| ATCTCCTCTCCATCTATTCC+AGG | + | chr1_3:55255732-55255751 | None:intergenic | 45.0% | |
| TCCACTGGCAAAGGAAAATG+TGG | - | chr1_3:55255755-55255774 | Msa0126290:CDS | 45.0% | |
| CCACTCCATGAGCATCAATA+GGG | - | chr1_3:55255778-55255797 | Msa0126290:CDS | 45.0% | |
| !! | AACTACGATTTACCGGCTTG+AGG | + | chr1_3:55255892-55255911 | None:intergenic | 45.0% |
| GGACCTTCAACTAAGTTCCA+AGG | + | chr1_3:55255952-55255971 | None:intergenic | 45.0% | |
| !!! | AAATAATTTTTTAAAATGAA+AGG | - | chr1_3:55252240-55252259 | Msa0126290:CDS | 5.0% |
| !! | TCAAAAAAAAAAAAAAAAAA+AGG | - | chr1_3:55256090-55256109 | Msa0126290:five_prime_UTR | 5.0% |
| TGTTAGCAGGTACACTCTCC+AGG | - | chr1_3:55251489-55251508 | Msa0126290:three_prime_UTR | 50.0% | |
| TGATTACTCACCAGTGCTCC+TGG | + | chr1_3:55251510-55251529 | None:intergenic | 50.0% | |
| CGACAAGGGTTGAATCTCAG+TGG | + | chr1_3:55251588-55251607 | None:intergenic | 50.0% | |
| GGTGCATGCCTCAATTTCCA+GGG | - | chr1_3:55251750-55251769 | Msa0126290:CDS | 50.0% | |
| TTGGAGCTGAAGTTGGACCT+TGG | - | chr1_3:55251979-55251998 | Msa0126290:intron | 50.0% | |
| GTTGGACCTTGGAGTAAGAC+TGG | - | chr1_3:55251990-55252009 | Msa0126290:intron | 50.0% | |
| AGTCCACCAGTCTTACTCCA+AGG | + | chr1_3:55251999-55252018 | None:intergenic | 50.0% | |
| !! | TGGAGTAAGACTGGTGGACT+TGG | - | chr1_3:55251999-55252018 | Msa0126290:CDS | 50.0% |
| !! | GGTGGACTTGGTGATGTTCT+TGG | - | chr1_3:55252011-55252030 | Msa0126290:CDS | 50.0% |
| !! | GGACTTGGTGATGTTCTTGG+TGG | - | chr1_3:55252014-55252033 | Msa0126290:CDS | 50.0% |
| !!! | TGGTGGACTTCCACCTGTTT+TGG | - | chr1_3:55252031-55252050 | Msa0126290:CDS | 50.0% |
| GGATACTGATGTGTCTGTCG+AGG | - | chr1_3:55252472-55252491 | Msa0126290:intron | 50.0% | |
| CAACTTTCAGGCTGCACTTG+AGG | - | chr1_3:55253592-55253611 | Msa0126290:intron | 50.0% | |
| GACTAGAGAGCCACACCATA+TGG | + | chr1_3:55253662-55253681 | None:intergenic | 50.0% | |
| CTTGTTTCCGGAGAACACAG+AGG | - | chr1_3:55254295-55254314 | Msa0126290:intron | 50.0% | |
| TTCCACACCTCTGTGTTCTC+CGG | + | chr1_3:55254305-55254324 | None:intergenic | 50.0% | |
| CACTGGTATCGTGAATGGCA+TGG | - | chr1_3:55254354-55254373 | Msa0126290:intron | 50.0% | |
| GAAGCTCTTCAAGCTGAGGT+TGG | - | chr1_3:55254551-55254570 | Msa0126290:intron | 50.0% | |
| GGGAACCGGCAAAAAGATCA+TGG | - | chr1_3:55254787-55254806 | Msa0126290:intron | 50.0% | |
| GGAGAAGCAAATTGAGCAGC+TGG | - | chr1_3:55254808-55254827 | Msa0126290:intron | 50.0% | |
| GAAGCAAATTGAGCAGCTGG+AGG | - | chr1_3:55254811-55254830 | Msa0126290:intron | 50.0% | |
| CAGCTGGAGGTAACATATCC+TGG | - | chr1_3:55254824-55254843 | Msa0126290:CDS | 50.0% | |
| GGAGGTAACATATCCTGGCA+AGG | - | chr1_3:55254829-55254848 | Msa0126290:CDS | 50.0% | |
| CATATCCTGGCAAGGCAATC+GGG | - | chr1_3:55254837-55254856 | Msa0126290:CDS | 50.0% | |
| ATATCCTGGCAAGGCAATCG+GGG | - | chr1_3:55254838-55254857 | Msa0126290:CDS | 50.0% | |
| CTCTACCGTTCCATATGGCA+TGG | + | chr1_3:55254966-55254985 | None:intergenic | 50.0% | |
| GTGCCCATCGTTTCATCAAC+TGG | - | chr1_3:55255230-55255249 | Msa0126290:intron | 50.0% | |
| CCCATCGTTTCATCAACTGG+TGG | - | chr1_3:55255233-55255252 | Msa0126290:intron | 50.0% | |
| !!! | GGTTTTAAGGGCTCTCGTGA+CGG | + | chr1_3:55255443-55255462 | None:intergenic | 50.0% |
| ! | TTGCATGGCTTGGGTACCAT+AGG | + | chr1_3:55255464-55255483 | None:intergenic | 50.0% |
| AGTCTTGAGCCATGCAGTTC+TGG | + | chr1_3:55255495-55255514 | None:intergenic | 50.0% | |
| ! | GCATGGCTCAAGACTTTTCG+TGG | - | chr1_3:55255500-55255519 | Msa0126290:CDS | 50.0% |
| ! | GGCTCAAGACTTTTCGTGGA+AGG | - | chr1_3:55255504-55255523 | Msa0126290:CDS | 50.0% |
| CAGTGCGTTCTCCCATAGTT+TGG | + | chr1_3:55255682-55255701 | None:intergenic | 50.0% | |
| GGCAACGAACCTGGAATAGA+TGG | - | chr1_3:55255720-55255739 | Msa0126290:CDS | 50.0% | |
| CGAACCTGGAATAGATGGAG+AGG | - | chr1_3:55255725-55255744 | Msa0126290:CDS | 50.0% | |
| ! | GCCACATTTTCCTTTGCCAG+TGG | + | chr1_3:55255759-55255778 | None:intergenic | 50.0% |
| GCCACTCCATGAGCATCAAT+AGG | - | chr1_3:55255777-55255796 | Msa0126290:CDS | 50.0% | |
| CCCTATTGATGCTCATGGAG+TGG | + | chr1_3:55255781-55255800 | None:intergenic | 50.0% | |
| TTATAGGCGTAGCCTCAAGC+CGG | - | chr1_3:55255877-55255896 | Msa0126290:intron | 50.0% | |
| GGGTGCATGCCTCAATTTCC+AGG | - | chr1_3:55251749-55251768 | Msa0126290:CDS | 55.0% | |
| CTCTCAACAAGCTGCACGTG+CGG | - | chr1_3:55251853-55251872 | Msa0126290:intron | 55.0% | |
| AGAAGACGAAGCAGCACGTG+CGG | + | chr1_3:55251883-55251902 | None:intergenic | 55.0% | |
| GGACCTTGGAGTAAGACTGG+TGG | - | chr1_3:55251993-55252012 | Msa0126290:CDS | 55.0% | |
| CGCGATCAACTCCTCTCTTG+TGG | + | chr1_3:55252651-55252670 | None:intergenic | 55.0% | |
| ! | AAAGGCGTGTCTTCCCTGGT+AGG | + | chr1_3:55253969-55253988 | None:intergenic | 55.0% |
| ! | CTGAAAAGGCGTGTCTTCCC+TGG | + | chr1_3:55253973-55253992 | None:intergenic | 55.0% |
| TTCCGGAGAACACAGAGGTG+TGG | - | chr1_3:55254300-55254319 | Msa0126290:intron | 55.0% | |
| GGCAGGCTAGAAGAGCAGAA+AGG | - | chr1_3:55254614-55254633 | Msa0126290:CDS | 55.0% | |
| GGCTATACAGGATTCCACGC+TGG | - | chr1_3:55255278-55255297 | Msa0126290:intron | 55.0% | |
| TGCAGGGACCAGCCAAACTA+TGG | - | chr1_3:55255667-55255686 | Msa0126290:CDS | 55.0% | |
| GCAGGGACCAGCCAAACTAT+GGG | - | chr1_3:55255668-55255687 | Msa0126290:CDS | 55.0% | |
| GCGTTCTCCCATAGTTTGGC+TGG | + | chr1_3:55255678-55255697 | None:intergenic | 55.0% | |
| TGGAGAGGAGATTGCTCCAC+TGG | - | chr1_3:55255740-55255759 | Msa0126290:CDS | 55.0% | |
| GGAGATTGCTCCACTGGCAA+AGG | - | chr1_3:55255746-55255765 | Msa0126290:CDS | 55.0% | |
| ! | GGTACACTCTCCAGGAGCAC+TGG | - | chr1_3:55251497-55251516 | Msa0126290:three_prime_UTR | 60.0% |
| ! | AGGCTGCACTTGAGGCACCA+AGG | - | chr1_3:55253600-55253619 | Msa0126290:intron | 60.0% |
| ! | GGCTGCACTTGAGGCACCAA+GGG | - | chr1_3:55253601-55253620 | Msa0126290:intron | 60.0% |
| GAACGCACTGTTGAGCCTCG+AGG | - | chr1_3:55255692-55255711 | Msa0126290:CDS | 60.0% | |
| GCTACCCCGATTGCCTTGCC+AGG | + | chr1_3:55254845-55254864 | None:intergenic | 65.0% | |
| CCACGTTGAACGCTCCAGCG+TGG | + | chr1_3:55255295-55255314 | None:intergenic | 65.0% | |
| ! | CCACGCTGGAGCGTTCAACG+TGG | - | chr1_3:55255292-55255311 | Msa0126290:intron | 65.0% |
| ! | CGCTGGAGCGTTCAACGTGG+AGG | - | chr1_3:55255295-55255314 | Msa0126290:intron | 65.0% |
| CTGTTGAGCCTCGAGGTCGC+AGG | - | chr1_3:55255699-55255718 | Msa0126290:CDS | 65.0% | |
| GTTCGTTGCCTGCGACCTCG+AGG | + | chr1_3:55255710-55255729 | None:intergenic | 65.0% | |
| GAGGTCGCAGGCAACGAACC+TGG | - | chr1_3:55255711-55255730 | Msa0126290:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 55251372 | 55256146 | 55251372 | ID=Msa0126290;Name=Msa0126290 |
| chr1_3 | mRNA | 55251372 | 55256146 | 55251372 | ID=Msa0126290-mRNA-1;Parent=Msa0126290;Name=Msa0126290-mRNA-1;_AED=0.07;_eAED=0.07;_QI=59|1|1|1|1|1|14|358|643 |
| chr1_3 | exon | 55251372 | 55251846 | 55251372 | ID=Msa0126290-mRNA-1:exon:17116;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55251993 | 55252121 | 55251993 | ID=Msa0126290-mRNA-1:exon:17115;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55252202 | 55252288 | 55252202 | ID=Msa0126290-mRNA-1:exon:17114;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55252539 | 55252730 | 55252539 | ID=Msa0126290-mRNA-1:exon:17113;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55252818 | 55252994 | 55252818 | ID=Msa0126290-mRNA-1:exon:17112;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55253080 | 55253323 | 55253080 | ID=Msa0126290-mRNA-1:exon:17111;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55253468 | 55253577 | 55253468 | ID=Msa0126290-mRNA-1:exon:17110;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55253655 | 55253755 | 55253655 | ID=Msa0126290-mRNA-1:exon:17109;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55253853 | 55253916 | 55253853 | ID=Msa0126290-mRNA-1:exon:17108;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55254604 | 55254693 | 55254604 | ID=Msa0126290-mRNA-1:exon:17107;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55254816 | 55254914 | 55254816 | ID=Msa0126290-mRNA-1:exon:17106;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55255025 | 55255105 | 55255025 | ID=Msa0126290-mRNA-1:exon:17105;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55255463 | 55255815 | 55255463 | ID=Msa0126290-mRNA-1:exon:17104;Parent=Msa0126290-mRNA-1 |
| chr1_3 | exon | 55256000 | 55256146 | 55256000 | ID=Msa0126290-mRNA-1:exon:17103;Parent=Msa0126290-mRNA-1 |
| chr1_3 | five_prime_UTR | 55256088 | 55256146 | 55256088 | ID=Msa0126290-mRNA-1:five_prime_utr;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55256000 | 55256087 | 55256000 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55255463 | 55255815 | 55255463 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55255025 | 55255105 | 55255025 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55254816 | 55254914 | 55254816 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55254604 | 55254693 | 55254604 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55253853 | 55253916 | 55253853 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55253655 | 55253755 | 55253655 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55253468 | 55253577 | 55253468 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55253080 | 55253323 | 55253080 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55252818 | 55252994 | 55252818 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55252539 | 55252730 | 55252539 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55252202 | 55252288 | 55252202 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55251993 | 55252121 | 55251993 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | CDS | 55251730 | 55251846 | 55251730 | ID=Msa0126290-mRNA-1:cds;Parent=Msa0126290-mRNA-1 |
| chr1_3 | three_prime_UTR | 55251372 | 55251729 | 55251372 | ID=Msa0126290-mRNA-1:three_prime_utr;Parent=Msa0126290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
