Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081070 | sp|C6TEX6|FEN1_SOYBN | 89.474 | 361 | 38 | 0 | 1 | 361 | 1 | 361 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081070 | A0A072VM97 | 98.969 | 388 | 4 | 0 | 1 | 388 | 1 | 388 | 0.0 | 793 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0036850 | Msa0081070 | 0.800423 | 1.451256e-48 | -8.615850e-47 |
| Msa0081060 | Msa0081070 | 0.880748 | 4.252314e-70 | -8.615850e-47 |
| Msa0081070 | Msa0228540 | 0.805570 | 1.252243e-49 | -8.615850e-47 |
| Msa0081070 | Msa0434920 | 0.814771 | 1.299921e-51 | -8.615850e-47 |
| Msa0081070 | Msa0478870 | 0.811517 | 6.728023e-51 | -8.615850e-47 |
| Msa0081070 | Msa0620990 | 0.821665 | 3.578143e-53 | -8.615850e-47 |
| Msa0081070 | Msa0687460 | 0.814784 | 1.291594e-51 | -8.615850e-47 |
| Msa0081070 | Msa0709780 | 0.807057 | 6.086769e-50 | -8.615850e-47 |
| Msa0081070 | Msa1258710 | 0.832451 | 9.381200e-56 | -8.615850e-47 |
| Msa0081070 | Msa1401390 | 0.802708 | 4.934528e-49 | -8.615850e-47 |
| Msa0081070 | Msa1432950 | 0.806416 | 8.315019e-50 | -8.615850e-47 |
| Msa0081070 | Msa1459380 | 0.826641 | 2.427035e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081070 | MtrunA17_Chr1g0193411 | 92.252 | 413 | 3 | 1 | 1 | 413 | 1 | 384 | 0.0 | 770 |
| Msa0081070 | MtrunA17_Chr8g0380081 | 26.829 | 287 | 190 | 6 | 1 | 282 | 1 | 272 | 4.73e-19 | 87.4 |
| Msa0081070 | MtrunA17_Chr7g0246801 | 31.560 | 282 | 160 | 15 | 1 | 274 | 1 | 257 | 2.67e-17 | 84.0 |
| Msa0081070 | MtrunA17_Chr6g0482931 | 24.810 | 395 | 260 | 12 | 1 | 382 | 1 | 371 | 5.29e-16 | 80.1 |
| Msa0081070 | MtrunA17_Chr7g0228021 | 32.432 | 111 | 72 | 1 | 141 | 251 | 1031 | 1138 | 8.63e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0081070 | AT5G26680.5 | 84.737 | 380 | 58 | 0 | 1 | 380 | 1 | 380 | 0.0 | 681 |
| Msa0081070 | AT5G26680.4 | 84.737 | 380 | 58 | 0 | 1 | 380 | 1 | 380 | 0.0 | 681 |
| Msa0081070 | AT5G26680.3 | 84.737 | 380 | 58 | 0 | 1 | 380 | 1 | 380 | 0.0 | 681 |
| Msa0081070 | AT5G26680.2 | 78.019 | 414 | 59 | 2 | 1 | 413 | 1 | 383 | 0.0 | 659 |
| Msa0081070 | AT5G26680.1 | 72.489 | 458 | 76 | 6 | 1 | 413 | 1 | 453 | 0.0 | 653 |
| Msa0081070 | AT1G29630.2 | 29.137 | 278 | 177 | 6 | 1 | 272 | 1 | 264 | 2.68e-21 | 97.1 |
| Msa0081070 | AT1G01880.3 | 29.104 | 268 | 161 | 10 | 1 | 264 | 1 | 243 | 1.10e-16 | 82.4 |
| Msa0081070 | AT1G01880.1 | 29.104 | 268 | 161 | 10 | 1 | 264 | 1 | 243 | 1.10e-16 | 82.4 |
| Msa0081070 | AT1G01880.2 | 29.104 | 268 | 160 | 11 | 1 | 264 | 1 | 242 | 1.30e-15 | 79.3 |
| Msa0081070 | AT1G18090.1 | 25.806 | 403 | 265 | 16 | 1 | 389 | 1 | 383 | 7.10e-15 | 77.0 |
| Msa0081070 | AT3G28030.4 | 30.952 | 126 | 84 | 1 | 126 | 251 | 721 | 843 | 8.31e-15 | 77.0 |
| Msa0081070 | AT3G28030.2 | 30.952 | 126 | 84 | 1 | 126 | 251 | 913 | 1035 | 9.65e-15 | 77.0 |
| Msa0081070 | AT3G28030.3 | 30.952 | 126 | 84 | 1 | 126 | 251 | 939 | 1061 | 1.17e-14 | 77.0 |
| Msa0081070 | AT3G28030.1 | 30.952 | 126 | 84 | 1 | 126 | 251 | 913 | 1035 | 1.22e-14 | 76.6 |
| Msa0081070 | AT1G01880.4 | 30.412 | 194 | 122 | 6 | 73 | 264 | 3 | 185 | 1.49e-14 | 75.9 |
| Msa0081070 | AT1G18090.2 | 25.558 | 403 | 266 | 16 | 1 | 389 | 1 | 383 | 1.60e-14 | 75.9 |
| Msa0081070 | AT1G29630.1 | 28.395 | 243 | 158 | 5 | 1 | 239 | 1 | 231 | 3.36e-13 | 72.0 |
Find 107 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGACTTATGTATACTTTC+TGG | 0.201124 | 1_2:+59599738 | Msa0081070:CDS |
| TTTGTTCTCCTTCATTGATT+TGG | 0.219066 | 1_2:-59596830 | None:intergenic |
| ATTAGATGGCGAAGAAATTT+AGG | 0.232530 | 1_2:-59599549 | None:intergenic |
| TTGTTCTCCTTCATTGATTT+GGG | 0.261805 | 1_2:-59596829 | None:intergenic |
| GCAACGTCAAATTCCATTAC+TGG | 0.277285 | 1_2:-59599594 | None:intergenic |
| TAATTTAAGTTAGATAATTC+TGG | 0.292059 | 1_2:+59602867 | Msa0081070:three_prime_UTR |
| CAATGTGTGCCACAGGTATT+GGG | 0.301115 | 1_2:+59599890 | Msa0081070:intron |
| ACCAGATGATTGGCCGTATC+AGG | 0.302586 | 1_2:+59600243 | Msa0081070:CDS |
| TAAATTTCTTCGCCATCTAA+TGG | 0.313159 | 1_2:+59599551 | Msa0081070:CDS |
| CCTTACGAAAACACCTTTAC+AGG | 0.320453 | 1_2:+59596548 | None:intergenic |
| AGTTGGATTTGTATCTTAGA+TGG | 0.321968 | 1_2:+59602636 | Msa0081070:exon |
| ATAGTTATTACTTCTTCATC+TGG | 0.327089 | 1_2:-59600337 | None:intergenic |
| TCAAACAACGATGGGTATTA+AGG | 0.329268 | 1_2:+59596661 | Msa0081070:exon |
| TTGAACTAGGATCCATTAGA+TGG | 0.369663 | 1_2:-59599563 | None:intergenic |
| GTACATACCTTCCGTTTGAT+AGG | 0.370776 | 1_2:-59600807 | None:intergenic |
| TGTGCTGCACTTTGCAAAGC+TGG | 0.379737 | 1_2:+59598256 | Msa0081070:CDS |
| GACATGGATTCCTTAACGTT+TGG | 0.380008 | 1_2:+59599522 | Msa0081070:CDS |
| CAAGTTAAATTAACTCGAAA+AGG | 0.387802 | 1_2:-59602942 | None:intergenic |
| AGAATGGGTTCAAAAGTGAT+AGG | 0.391666 | 1_2:+59600512 | Msa0081070:CDS |
| TGAAACCACTTACAAGAAAC+TGG | 0.396979 | 1_2:-59596906 | None:intergenic |
| AGCTCTTGATTCTTCATCTC+CGG | 0.402266 | 1_2:-59597638 | None:intergenic |
| TTGCAGAGGATAATGTGAAT+TGG | 0.408026 | 1_2:-59596630 | None:intergenic |
| TCCTGATACGGCCAATCATC+TGG | 0.411236 | 1_2:-59600244 | None:intergenic |
| AACAAATTCGAATCTTACTT+TGG | 0.413135 | 1_2:+59596847 | Msa0081070:CDS |
| TGACGGCAGAAAGATGAATA+AGG | 0.423648 | 1_2:-59596603 | None:intergenic |
| GACATCTTATGATCAATTGC+CGG | 0.425155 | 1_2:-59601539 | None:intergenic |
| TTTAGGAGCTCCAAACGTTA+AGG | 0.426815 | 1_2:-59599532 | None:intergenic |
| GTATACATAAGTCAATAAAT+TGG | 0.431271 | 1_2:-59599731 | None:intergenic |
| ACATTTCTAGTAAATGAGAA+TGG | 0.445257 | 1_2:+59600496 | Msa0081070:CDS |
| ATGAAGCTGGTGAAGTTACT+AGG | 0.451951 | 1_2:+59597032 | Msa0081070:CDS |
| GTGAATGATGCTAAAGCTAA+AGG | 0.452022 | 1_2:+59602569 | Msa0081070:CDS |
| TGCAACGTCACCTCAACAAC+AGG | 0.456473 | 1_2:-59598143 | None:intergenic |
| ATGAAGTACTTAATCTTAAG+TGG | 0.475016 | 1_2:+59600308 | Msa0081070:CDS |
| TCATCATCAGTTGTGACCTC+TGG | 0.477183 | 1_2:-59600289 | None:intergenic |
| CGAGGCTACCGCGGGTTTGA+CGG | 0.478333 | 1_2:+59597784 | Msa0081070:CDS |
| TTCAAAGAAGATTCCAGTAA+TGG | 0.481227 | 1_2:+59599581 | Msa0081070:CDS |
| ACATTGAGCCTCTGCTTCTG+AGG | 0.483766 | 1_2:-59598236 | None:intergenic |
| TTAGCTTTAGCATCATTCAC+TGG | 0.498319 | 1_2:-59602566 | None:intergenic |
| ACTGGAATCTTCTTTGAACT+AGG | 0.498453 | 1_2:-59599576 | None:intergenic |
| ATCCATCAGTACCTATCAAA+CGG | 0.498859 | 1_2:+59600796 | Msa0081070:CDS |
| TGAATGATGCTAAAGCTAAA+GGG | 0.506104 | 1_2:+59602570 | Msa0081070:CDS |
| GTTGGATTTGTATCTTAGAT+GGG | 0.507708 | 1_2:+59602637 | Msa0081070:exon |
| TGCACTTTGCAAAGCTGGAA+AGG | 0.511154 | 1_2:+59598261 | Msa0081070:CDS |
| TAGATTGTTGTGGGAAGAAG+TGG | 0.512021 | 1_2:+59596992 | Msa0081070:intron |
| GGTACTGATGGATTTGCAGT+TGG | 0.513657 | 1_2:-59600786 | None:intergenic |
| TTCCGTTTGATAGGTACTGA+TGG | 0.513936 | 1_2:-59600798 | None:intergenic |
| CATTTCTAGTAAATGAGAAT+GGG | 0.515548 | 1_2:+59600497 | Msa0081070:CDS |
| GGTACCAGGTACCAGATGAT+TGG | 0.518316 | 1_2:+59600233 | Msa0081070:intron |
| TTCTAACTGCTCAAGGTCCA+TGG | 0.518572 | 1_2:+59601574 | Msa0081070:CDS |
| CAATCAGACTTCTAGAAGCC+GGG | 0.522415 | 1_2:+59597473 | Msa0081070:CDS |
| CGTGCTTAGATCTTTCAAAC+CGG | 0.525276 | 1_2:+59601520 | Msa0081070:CDS |
| TAGCATCAACAGCAATCTTA+CGG | 0.527772 | 1_2:-59596870 | None:intergenic |
| ACAATCAGACTTCTAGAAGC+CGG | 0.528458 | 1_2:+59597472 | Msa0081070:CDS |
| CATGGGAGTGCCTGTTGTTG+AGG | 0.530578 | 1_2:+59598133 | Msa0081070:CDS |
| AGTCGTCGAGCCTCCTGATA+CGG | 0.531492 | 1_2:-59600256 | None:intergenic |
| CATTGAGCCTCTGCTTCTGA+GGG | 0.532841 | 1_2:-59598235 | None:intergenic |
| AAGTTAAATTAACTCGAAAA+GGG | 0.536894 | 1_2:-59602941 | None:intergenic |
| CGTCAAACCCGCGGTAGCCT+CGG | 0.539383 | 1_2:-59597783 | None:intergenic |
| TGCGAATTTCTAACTGCTCA+AGG | 0.541055 | 1_2:+59601567 | Msa0081070:CDS |
| AGGGAGTAACAAGAAAACTA+AGG | 0.546996 | 1_2:+59602589 | Msa0081070:CDS |
| TCCCGCGCACTCTCCTGTAA+AGG | 0.554282 | 1_2:-59596561 | None:intergenic |
| GAATTACACTGGCTTCATCC+CGG | 0.555023 | 1_2:-59597491 | None:intergenic |
| GTCATTTCAGGCTGACAACA+AGG | 0.555566 | 1_2:+59597913 | Msa0081070:intron |
| GTTATTACTTCTTCATCTGG+AGG | 0.556809 | 1_2:-59600334 | None:intergenic |
| TGCTGTGGCTTCTGAAGACA+TGG | 0.557625 | 1_2:+59599506 | Msa0081070:CDS |
| ATTCTCATTCAAACAACGAT+GGG | 0.565501 | 1_2:+59596653 | Msa0081070:exon |
| TAATGCTCCCAAATCAATGA+AGG | 0.565914 | 1_2:+59596822 | Msa0081070:CDS |
| GAGTCATTTACATGTTGACC+AGG | 0.570576 | 1_2:+59602662 | Msa0081070:three_prime_UTR |
| CACCTTTACAGGAGAGTGCG+CGG | 0.572258 | 1_2:+59596559 | Msa0081070:five_prime_UTR |
| GAATGGGTTCAAAAGTGATA+GGG | 0.572542 | 1_2:+59600513 | Msa0081070:CDS |
| AAAGAGAGCCGAGGCTACCG+CGG | 0.575078 | 1_2:+59597775 | Msa0081070:CDS |
| TAAGTCAATAAATTGGTCCA+TGG | 0.575375 | 1_2:-59599724 | None:intergenic |
| CAAAAGTGATAGGGTGACAA+AGG | 0.576710 | 1_2:+59600522 | Msa0081070:CDS |
| GATTACTGTGACAACATTCG+AGG | 0.577617 | 1_2:+59599765 | Msa0081070:CDS |
| GAAATGTTGACTAATGAAGC+TGG | 0.580121 | 1_2:+59597019 | Msa0081070:CDS |
| AATGGAATTTGACGTTGCAA+AGG | 0.585097 | 1_2:+59599599 | Msa0081070:CDS |
| AAGAGAGCCGAGGCTACCGC+GGG | 0.585100 | 1_2:+59597776 | Msa0081070:CDS |
| TTTGCAGTTGGCATGAAGGA+GGG | 0.585902 | 1_2:+59602782 | Msa0081070:intron |
| AATTCTCATTCAAACAACGA+TGG | 0.591195 | 1_2:+59596652 | Msa0081070:exon |
| ACGGCCAATCATCTGGTACC+TGG | 0.591435 | 1_2:-59600237 | None:intergenic |
| AAGAAAACTAAGGCCGGTGG+CGG | 0.593257 | 1_2:+59602599 | Msa0081070:CDS |
| AGAACAAGTCATCACAAGGC+CGG | 0.593889 | 1_2:+59600662 | Msa0081070:CDS |
| TCTTGATTCTTCATCTCCGG+TGG | 0.593963 | 1_2:-59597635 | None:intergenic |
| GGGTTTGACGGAAGCTCTAG+AGG | 0.596065 | 1_2:+59597796 | Msa0081070:CDS |
| AATGTGTGCCACAGGTATTG+GGG | 0.602638 | 1_2:+59599891 | Msa0081070:intron |
| ATCAGTACCTATCAAACGGA+AGG | 0.602952 | 1_2:+59600800 | Msa0081070:CDS |
| GCAGGCACCCTCAGAAGCAG+AGG | 0.611684 | 1_2:+59598228 | Msa0081070:intron |
| AGTAACAAGAAAACTAAGGC+CGG | 0.615091 | 1_2:+59602593 | Msa0081070:CDS |
| ATGTGTGCCACAGGTATTGG+GGG | 0.618919 | 1_2:+59599892 | Msa0081070:intron |
| TTACCACCGATTCAGGTACC+AGG | 0.619372 | 1_2:+59600219 | Msa0081070:intron |
| ACCTTTACAGGAGAGTGCGC+GGG | 0.621575 | 1_2:+59596560 | Msa0081070:five_prime_UTR |
| TATTATACAGGTGTATGCTG+TGG | 0.633214 | 1_2:+59599491 | Msa0081070:intron |
| GCAGTTAGAAATTCGCAGAG+AGG | 0.642654 | 1_2:-59601561 | None:intergenic |
| ATTCAGTAAACGGACAGTGA+AGG | 0.645257 | 1_2:+59597949 | Msa0081070:CDS |
| GGAGGAGCTAGATTTGACCA+TGG | 0.645396 | 1_2:+59599707 | Msa0081070:CDS |
| AGATGATTGGCCGTATCAGG+AGG | 0.645693 | 1_2:+59600246 | Msa0081070:CDS |
| GCAAAGAACAAGTCATCACA+AGG | 0.651244 | 1_2:+59600658 | Msa0081070:CDS |
| TGGAAAACATAAGCAAAGAG+AGG | 0.655385 | 1_2:+59599965 | Msa0081070:CDS |
| TAGAGCTTCCGTCAAACCCG+CGG | 0.656861 | 1_2:-59597792 | None:intergenic |
| CAGTCTCTCAAAGAGAGCCG+AGG | 0.661691 | 1_2:+59597766 | Msa0081070:intron |
| CTGAAGCTCATACGCCAACA+CGG | 0.665576 | 1_2:+59599925 | Msa0081070:CDS |
| ATTTGCAAGGAATGTTTGCG+CGG | 0.671541 | 1_2:+59597449 | Msa0081070:CDS |
| TAATGTGAATTGGAGTGTGA+CGG | 0.675611 | 1_2:-59596620 | None:intergenic |
| TTGTGATACAATGCTTCATG+TGG | 0.680961 | 1_2:+59602900 | Msa0081070:three_prime_UTR |
| AACAAGAAAACTAAGGCCGG+TGG | 0.687823 | 1_2:+59602596 | Msa0081070:CDS |
| GTTTGAATGAGAATTTGCAG+AGG | 0.689167 | 1_2:-59596644 | None:intergenic |
| TGTGTGCCACAGGTATTGGG+GGG | 0.726679 | 1_2:+59599893 | Msa0081070:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATATTTAATAAAATAA+AGG | - | chr1_2:59601365-59601384 | None:intergenic | 0.0% |
| !!! | TTTTATTAAATATTAATAAT+AGG | + | chr1_2:59601368-59601387 | Msa0081070:intron | 0.0% |
| !! | TTTATTAAATATTAATAATA+GGG | + | chr1_2:59601369-59601388 | Msa0081070:intron | 0.0% |
| !!! | TTTAATGTTGATTAATTTTT+AGG | + | chr1_2:59596777-59596796 | Msa0081070:intron | 10.0% |
| !!! | TTAATGTTGATTAATTTTTA+GGG | + | chr1_2:59596778-59596797 | Msa0081070:intron | 10.0% |
| !!! | AAACATTTTATATATTATAC+AGG | + | chr1_2:59599479-59599498 | Msa0081070:intron | 10.0% |
| !!! | TTTTGTTTAATTTTTCTGTA+AGG | + | chr1_2:59597376-59597395 | Msa0081070:intron | 15.0% |
| !!! | TTTGTTTAATTTTTCTGTAA+GGG | + | chr1_2:59597377-59597396 | Msa0081070:intron | 15.0% |
| !! | ATATTGAAAAATTCAGTAAA+CGG | + | chr1_2:59597939-59597958 | Msa0081070:CDS | 15.0% |
| !! | AGTATATAATATATTCTCAA+CGG | - | chr1_2:59598062-59598081 | None:intergenic | 15.0% |
| !! | AATATATTATATACTCTTGT+AGG | + | chr1_2:59598067-59598086 | Msa0081070:intron | 15.0% |
| !!! | TTATTTATTTTTCATTTCCA+TGG | - | chr1_2:59598367-59598386 | None:intergenic | 15.0% |
| !! | TAACTAAAATTAATATACCA+CGG | - | chr1_2:59598759-59598778 | None:intergenic | 15.0% |
| !!! | TATTAATTTTAGTTAACATG+TGG | + | chr1_2:59598764-59598783 | Msa0081070:intron | 15.0% |
| !!! | ATTAATTTTAGTTAACATGT+GGG | + | chr1_2:59598765-59598784 | Msa0081070:intron | 15.0% |
| !! | TCACTTTGAATAAAAATTAT+AGG | + | chr1_2:59599119-59599138 | Msa0081070:intron | 15.0% |
| !!! | GTAATGTAACATTTAATTTT+GGG | - | chr1_2:59599222-59599241 | None:intergenic | 15.0% |
| !! | TTAAATAGTTTCATAAATAG+TGG | - | chr1_2:59599244-59599263 | None:intergenic | 15.0% |
| !! | TCAAATGCAAAAAATATTAA+AGG | - | chr1_2:59599284-59599303 | None:intergenic | 15.0% |
| !! | AAAACAAAGAATTTCAAAAT+GGG | - | chr1_2:59600003-59600022 | None:intergenic | 15.0% |
| !! | AAATTAATAAAATTTGACTG+TGG | - | chr1_2:59600175-59600194 | None:intergenic | 15.0% |
| !!! | TATGATTTTTTTTCAATGTT+AGG | + | chr1_2:59600615-59600634 | Msa0081070:intron | 15.0% |
| !! | TAATAATTATAATCACTTAC+CGG | - | chr1_2:59600684-59600703 | None:intergenic | 15.0% |
| !!! | CTTAATATTTTTGGTAAATT+TGG | - | chr1_2:59601451-59601470 | None:intergenic | 15.0% |
| !!! | AAATATCAGCTTAATATTTT+TGG | - | chr1_2:59601460-59601479 | None:intergenic | 15.0% |
| !! | TTAATAAAGTAGAAATGAAA+AGG | - | chr1_2:59602105-59602124 | None:intergenic | 15.0% |
| !!! | ATTACAGAAAATTGTTATTA+TGG | + | chr1_2:59602162-59602181 | Msa0081070:intron | 15.0% |
| !!! | TTATTATCAATTTGTTTTCA+TGG | - | chr1_2:59602272-59602291 | None:intergenic | 15.0% |
| !!! | TTTTCAATTATCTTTAACAT+TGG | - | chr1_2:59602461-59602480 | None:intergenic | 15.0% |
| !!! | TAATTTAAGTTAGATAATTC+TGG | + | chr1_2:59602867-59602886 | Msa0081070:three_prime_UTR | 15.0% |
| !! | TTTCAATTTCAACCTAAAAT+GGG | + | chr1_2:59596924-59596943 | Msa0081070:intron | 20.0% |
| !! | TAGAAGAAAATGCATTAATT+AGG | - | chr1_2:59597736-59597755 | None:intergenic | 20.0% |
| !!! | TATTATAATGGATTGAAACA+AGG | + | chr1_2:59598024-59598043 | Msa0081070:intron | 20.0% |
| !!! | TATCATTTTAGTTTTCAAGA+AGG | - | chr1_2:59598311-59598330 | None:intergenic | 20.0% |
| !!! | TATCATTTTAGTTTTCAAGA+AGG | - | chr1_2:59598311-59598330 | None:intergenic | 20.0% |
| !! | GTGTTTAATTAAAAACTAGA+GGG | - | chr1_2:59598597-59598616 | None:intergenic | 20.0% |
| !! | AGTGTTTAATTAAAAACTAG+AGG | - | chr1_2:59598598-59598617 | None:intergenic | 20.0% |
| !!! | TCGCTTTGAATAAAAATTAA+GGG | - | chr1_2:59598626-59598645 | None:intergenic | 20.0% |
| !!! | GGTAATGTAACATTTAATTT+TGG | - | chr1_2:59599223-59599242 | None:intergenic | 20.0% |
| !!! | CATAGCAAAAGTTATATTTT+TGG | - | chr1_2:59599401-59599420 | None:intergenic | 20.0% |
| !!! | CTTGTATTAATTTGATATGA+AGG | - | chr1_2:59599424-59599443 | None:intergenic | 20.0% |
| !! | GTATACATAAGTCAATAAAT+TGG | - | chr1_2:59599734-59599753 | None:intergenic | 20.0% |
| !! | GAAAACAAAGAATTTCAAAA+TGG | - | chr1_2:59600004-59600023 | None:intergenic | 20.0% |
| !! | AACTTTAAGTATTCTTTCAA+AGG | + | chr1_2:59600370-59600389 | Msa0081070:intron | 20.0% |
| !! | ACTTTAAGTATTCTTTCAAA+GGG | + | chr1_2:59600371-59600390 | Msa0081070:intron | 20.0% |
| !! | TACATAGATATAACAAACAT+AGG | - | chr1_2:59600420-59600439 | None:intergenic | 20.0% |
| !! | ATATCTATGTATCAATTCTT+TGG | + | chr1_2:59600429-59600448 | Msa0081070:intron | 20.0% |
| !!! | TTTAGTTTTTCTTCTTCTTT+TGG | + | chr1_2:59600945-59600964 | Msa0081070:intron | 20.0% |
| !!! | TTAGTTTTTCTTCTTCTTTT+GGG | + | chr1_2:59600946-59600965 | Msa0081070:intron | 20.0% |
| !! | AATAATGTATATCCATATCT+CGG | - | chr1_2:59601153-59601172 | None:intergenic | 20.0% |
| !! | ATTATTCATGCATTTGATAT+GGG | + | chr1_2:59601167-59601186 | Msa0081070:intron | 20.0% |
| !!! | ATATGGGGTATTTTTTTTAT+TGG | + | chr1_2:59601183-59601202 | Msa0081070:intron | 20.0% |
| !! | ATAAAATAAAGGAACACAAA+GGG | - | chr1_2:59601354-59601373 | None:intergenic | 20.0% |
| !! | AATAAAATAAAGGAACACAA+AGG | - | chr1_2:59601355-59601374 | None:intergenic | 20.0% |
| !!! | ATGTAGTTTTAAAATTTCTC+AGG | - | chr1_2:59601779-59601798 | None:intergenic | 20.0% |
| !!! | AGAAATTTTAAAACTACATC+AGG | + | chr1_2:59601780-59601799 | Msa0081070:intron | 20.0% |
| !!! | AGAAAATTGTTATTATGGTT+TGG | + | chr1_2:59602167-59602186 | Msa0081070:intron | 20.0% |
| !! | AAGTTAAATTAACTCGAAAA+GGG | - | chr1_2:59602944-59602963 | None:intergenic | 20.0% |
| ! | GAAATTGAGAGAAAAATAGA+GGG | - | chr1_2:59596701-59596720 | None:intergenic | 25.0% |
| ! | AACAAATTCGAATCTTACTT+TGG | + | chr1_2:59596847-59596866 | Msa0081070:CDS | 25.0% |
| ! | GTTTCAATTTCAACCTAAAA+TGG | + | chr1_2:59596923-59596942 | Msa0081070:intron | 25.0% |
| !! | ATCAACATTTAACCCATTTT+AGG | - | chr1_2:59596939-59596958 | None:intergenic | 25.0% |
| !!! | ATTTTGATGTAGATTGTTGT+GGG | + | chr1_2:59596983-59597002 | Msa0081070:intron | 25.0% |
| ! | GTAGTAATTAAATCTCTTAG+TGG | + | chr1_2:59597058-59597077 | Msa0081070:intron | 25.0% |
| ! | ATAAACTGAATATCCAAACA+GGG | - | chr1_2:59597107-59597126 | None:intergenic | 25.0% |
| ! | AATAAACTGAATATCCAAAC+AGG | - | chr1_2:59597108-59597127 | None:intergenic | 25.0% |
| ! | AAACAACTGAACACAATTAA+GGG | - | chr1_2:59597358-59597377 | None:intergenic | 25.0% |
| ! | AAAACAACTGAACACAATTA+AGG | - | chr1_2:59597359-59597378 | None:intergenic | 25.0% |
| !! | GAATTTTATAGTCATTTGCA+AGG | + | chr1_2:59597436-59597455 | Msa0081070:intron | 25.0% |
| ! | AAAAAGAAGAAGAATTACAC+TGG | - | chr1_2:59597505-59597524 | None:intergenic | 25.0% |
| !!! | TATCCAGATATGTTTTTGAT+GGG | + | chr1_2:59597609-59597628 | Msa0081070:intron | 25.0% |
| ! | GAGATATCTTGTATTAAATC+AGG | + | chr1_2:59597863-59597882 | Msa0081070:intron | 25.0% |
| !!! | AAAAGACTTTTAAGACTCAT+GGG | + | chr1_2:59598116-59598135 | Msa0081070:CDS | 25.0% |
| ! | GCTATTTAAGAAAACCTAAA+GGG | - | chr1_2:59598565-59598584 | None:intergenic | 25.0% |
| !! | TGCTATTTAAGAAAACCTAA+AGG | - | chr1_2:59598566-59598585 | None:intergenic | 25.0% |
| ! | CTTTGAATAAAAATTAAGGG+AGG | - | chr1_2:59598623-59598642 | None:intergenic | 25.0% |
| !! | GTCGCTTTGAATAAAAATTA+AGG | - | chr1_2:59598627-59598646 | None:intergenic | 25.0% |
| ! | AGTGTTTAGTTAAAAAGTAG+AGG | + | chr1_2:59599147-59599166 | Msa0081070:intron | 25.0% |
| ! | GTGTTTAGTTAAAAAGTAGA+GGG | + | chr1_2:59599148-59599167 | Msa0081070:intron | 25.0% |
| ! | TGTTTAGTTAAAAAGTAGAG+GGG | + | chr1_2:59599149-59599168 | Msa0081070:intron | 25.0% |
| !!! | AAAAGTTATATTTTTGGTGG+TGG | - | chr1_2:59599395-59599414 | None:intergenic | 25.0% |
| !!! | AGCAAAAGTTATATTTTTGG+TGG | - | chr1_2:59599398-59599417 | None:intergenic | 25.0% |
| !! | ATATCTCATGTTTCAGATTT+TGG | + | chr1_2:59599686-59599705 | Msa0081070:intron | 25.0% |
| !! | ATTGACTTATGTATACTTTC+TGG | + | chr1_2:59599738-59599757 | Msa0081070:CDS | 25.0% |
| ! | CATTAAAGATCCAAATATAC+AGG | - | chr1_2:59600098-59600117 | None:intergenic | 25.0% |
| ! | TGTAAAATGTGTCATATAAG+TGG | - | chr1_2:59600127-59600146 | None:intergenic | 25.0% |
| !! | ATGAAGTACTTAATCTTAAG+TGG | + | chr1_2:59600308-59600327 | Msa0081070:CDS | 25.0% |
| ! | ATAGTTATTACTTCTTCATC+TGG | - | chr1_2:59600340-59600359 | None:intergenic | 25.0% |
| !!! | ACATTTCTAGTAAATGAGAA+TGG | + | chr1_2:59600496-59600515 | Msa0081070:CDS | 25.0% |
| !!! | CATTTCTAGTAAATGAGAAT+GGG | + | chr1_2:59600497-59600516 | Msa0081070:CDS | 25.0% |
| ! | GGCAATAGAAAAAATTAAAG+CGG | + | chr1_2:59600636-59600655 | Msa0081070:intron | 25.0% |
| ! | CTTAAAAAATGATTCCAATC+TGG | - | chr1_2:59600766-59600785 | None:intergenic | 25.0% |
| ! | TTTGAATGTTTAACACATAG+TGG | - | chr1_2:59600858-59600877 | None:intergenic | 25.0% |
| !! | ACATTCAAAATTGTTGTTGA+AGG | + | chr1_2:59600869-59600888 | Msa0081070:intron | 25.0% |
| !! | ATAATTCATGATCTAGTTTC+AGG | - | chr1_2:59600986-59601005 | None:intergenic | 25.0% |
| ! | AACATTATGAAAACTATGCA+AGG | - | chr1_2:59601014-59601033 | None:intergenic | 25.0% |
| ! | CATTATTCATGCATTTGATA+TGG | + | chr1_2:59601166-59601185 | Msa0081070:intron | 25.0% |
| ! | TTATTCATGCATTTGATATG+GGG | + | chr1_2:59601168-59601187 | Msa0081070:intron | 25.0% |
| ! | TAAAATAAAGGAACACAAAG+GGG | - | chr1_2:59601353-59601372 | None:intergenic | 25.0% |
| !!! | TTCAATTTTTTTCTCAGATG+TGG | - | chr1_2:59601406-59601425 | None:intergenic | 25.0% |
| ! | TGAGAAAAAAATTGAAGTAC+CGG | + | chr1_2:59601410-59601429 | Msa0081070:intron | 25.0% |
| ! | TTCCTTTAGCATAAGTATAT+AGG | + | chr1_2:59601891-59601910 | Msa0081070:intron | 25.0% |
| !!! | AAACTTTTAAGAAGTCTCAT+TGG | + | chr1_2:59601941-59601960 | Msa0081070:intron | 25.0% |
| ! | ATAAAGTAGAAATGAAAAGG+AGG | - | chr1_2:59602102-59602121 | None:intergenic | 25.0% |
| !! | TTTTCTGTAATAGATTGAAC+AGG | - | chr1_2:59602153-59602172 | None:intergenic | 25.0% |
| !!! | TATCAATTTGTTTTCATGGT+AGG | - | chr1_2:59602268-59602287 | None:intergenic | 25.0% |
| ! | AAAAAGAAACTAATCCTACA+AGG | + | chr1_2:59602340-59602359 | Msa0081070:intron | 25.0% |
| ! | AATTATCCTAATTACCTTGT+AGG | - | chr1_2:59602357-59602376 | None:intergenic | 25.0% |
| ! | AAAACAGTAACATATTATGC+AGG | - | chr1_2:59602494-59602513 | None:intergenic | 25.0% |
| !! | TGCATAATATGTTACTGTTT+TGG | + | chr1_2:59602493-59602512 | Msa0081070:intron | 25.0% |
| ! | GTAGAATCATAGATGTTAAT+AGG | - | chr1_2:59602746-59602765 | None:intergenic | 25.0% |
| !! | CACACAAATATTTTACAGTT+TGG | - | chr1_2:59602836-59602855 | None:intergenic | 25.0% |
| ! | CAAGTTAAATTAACTCGAAA+AGG | - | chr1_2:59602945-59602964 | None:intergenic | 25.0% |
| AATTCTCATTCAAACAACGA+TGG | + | chr1_2:59596652-59596671 | Msa0081070:exon | 30.0% | |
| ATTCTCATTCAAACAACGAT+GGG | + | chr1_2:59596653-59596672 | Msa0081070:exon | 30.0% | |
| CGAAATTGAGAGAAAAATAG+AGG | - | chr1_2:59596702-59596721 | None:intergenic | 30.0% | |
| !! | TTGTTCTCCTTCATTGATTT+GGG | - | chr1_2:59596832-59596851 | None:intergenic | 30.0% |
| ! | TTTGTTCTCCTTCATTGATT+TGG | - | chr1_2:59596833-59596852 | None:intergenic | 30.0% |
| ATTTACCAGTTTCTTGTAAG+TGG | + | chr1_2:59596901-59596920 | Msa0081070:intron | 30.0% | |
| !! | GATTTTGATGTAGATTGTTG+TGG | + | chr1_2:59596982-59597001 | Msa0081070:intron | 30.0% |
| TCCAAGATAGCTTATGAAAA+CGG | - | chr1_2:59597218-59597237 | None:intergenic | 30.0% | |
| CAAAACGACTTATTCTCATA+TGG | - | chr1_2:59597554-59597573 | None:intergenic | 30.0% | |
| !! | GTATCCAGATATGTTTTTGA+TGG | + | chr1_2:59597608-59597627 | Msa0081070:intron | 30.0% |
| AGAATCAAGAGCTGAAAAAA+CGG | + | chr1_2:59597648-59597667 | Msa0081070:CDS | 30.0% | |
| !! | CTGAAAAAACGGTATTTTTG+CGG | + | chr1_2:59597659-59597678 | Msa0081070:intron | 30.0% |
| !! | TGAAAAAACGGTATTTTTGC+GGG | + | chr1_2:59597660-59597679 | Msa0081070:intron | 30.0% |
| ! | TTGATCTTTGTTGTCATTTC+AGG | + | chr1_2:59597901-59597920 | Msa0081070:intron | 30.0% |
| !!! | AATGGATTGAAACAAGGTTT+TGG | + | chr1_2:59598030-59598049 | Msa0081070:intron | 30.0% |
| !!! | CAAAAGACTTTTAAGACTCA+TGG | + | chr1_2:59598115-59598134 | Msa0081070:CDS | 30.0% |
| !!! | CATTTTAGTTTTCAAGAAGG+TGG | - | chr1_2:59598308-59598327 | None:intergenic | 30.0% |
| ATTTAAGAAAACCTAAAGGG+AGG | - | chr1_2:59598562-59598581 | None:intergenic | 30.0% | |
| CTAACGATGTTACATAACAA+TGG | - | chr1_2:59598658-59598677 | None:intergenic | 30.0% | |
| TTTGATGAGATACGAAAAGT+AGG | + | chr1_2:59598928-59598947 | Msa0081070:intron | 30.0% | |
| ! | TGCTATTTAAGAAGACCTTA+AGG | + | chr1_2:59599179-59599198 | Msa0081070:intron | 30.0% |
| GCTATTTAAGAAGACCTTAA+GGG | + | chr1_2:59599180-59599199 | Msa0081070:intron | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr1_2:59599350-59599369 | Msa0081070:intron | 30.0% | |
| ATTAGATGGCGAAGAAATTT+AGG | - | chr1_2:59599552-59599571 | None:intergenic | 30.0% | |
| TAAATTTCTTCGCCATCTAA+TGG | + | chr1_2:59599551-59599570 | Msa0081070:CDS | 30.0% | |
| TTCAAAGAAGATTCCAGTAA+TGG | + | chr1_2:59599581-59599600 | Msa0081070:CDS | 30.0% | |
| !! | ATACATTTTGAAAGCAGTCA+AGG | - | chr1_2:59599633-59599652 | None:intergenic | 30.0% |
| TTGACTGCTTTCAAAATGTA+TGG | + | chr1_2:59599632-59599651 | Msa0081070:intron | 30.0% | |
| TGACTGCTTTCAAAATGTAT+GGG | + | chr1_2:59599633-59599652 | Msa0081070:intron | 30.0% | |
| TAAGTCAATAAATTGGTCCA+TGG | - | chr1_2:59599727-59599746 | None:intergenic | 30.0% | |
| AATTCTTTGGCAAGATAATC+AGG | + | chr1_2:59600442-59600461 | Msa0081070:intron | 30.0% | |
| ! | TGTTTAGAGTTGAGTTTCAT+TGG | + | chr1_2:59600561-59600580 | Msa0081070:intron | 30.0% |
| ! | GTTTAGAGTTGAGTTTCATT+GGG | + | chr1_2:59600562-59600581 | Msa0081070:intron | 30.0% |
| GTATTTCCAGAAAGAAAGTT+AGG | - | chr1_2:59600744-59600763 | None:intergenic | 30.0% | |
| ! | AACATTTATGGTCAGACTTT+TGG | + | chr1_2:59600912-59600931 | Msa0081070:intron | 30.0% |
| AAGAAAAACTAAATCACAGC+AGG | - | chr1_2:59600938-59600957 | None:intergenic | 30.0% | |
| TAGTTTCAGGAAGACAAATA+CGG | - | chr1_2:59600973-59600992 | None:intergenic | 30.0% | |
| AACGTTAAGACTAACATTGT+TGG | + | chr1_2:59601218-59601237 | Msa0081070:intron | 30.0% | |
| ACGTTAAGACTAACATTGTT+GGG | + | chr1_2:59601219-59601238 | Msa0081070:intron | 30.0% | |
| !! | ATTGAAAACACTGATTTGTG+TGG | + | chr1_2:59601257-59601276 | Msa0081070:intron | 30.0% |
| ATTTGTTCACTAACTGGATT+TGG | + | chr1_2:59601309-59601328 | Msa0081070:intron | 30.0% | |
| AAAATAAAGGAACACAAAGG+GGG | - | chr1_2:59601352-59601371 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTCTCAGATGTGGA+AGG | - | chr1_2:59601402-59601421 | None:intergenic | 30.0% |
| TTGGTAAAAATTCCTGTTTC+CGG | - | chr1_2:59601432-59601451 | None:intergenic | 30.0% | |
| ! | ATTTTGCTACACTTAATGAC+AGG | + | chr1_2:59601487-59601506 | Msa0081070:intron | 30.0% |
| TTAGCATAGATTGACATTGA+AGG | - | chr1_2:59601706-59601725 | None:intergenic | 30.0% | |
| AGCCTATATACTTATGCTAA+AGG | - | chr1_2:59601896-59601915 | None:intergenic | 30.0% | |
| TTGTTTCAAGCCTAATCAAT+GGG | - | chr1_2:59601988-59602007 | None:intergenic | 30.0% | |
| ! | GAAACAAGTTTCCATTGATT+AGG | + | chr1_2:59602001-59602020 | Msa0081070:intron | 30.0% |
| ! | GTTTGGTATGATTGATGATT+TGG | + | chr1_2:59602184-59602203 | Msa0081070:intron | 30.0% |
| ACTAATCCTACAAGGTAATT+AGG | + | chr1_2:59602348-59602367 | Msa0081070:intron | 30.0% | |
| !!! | ATGTACTCTTTTTTCTTGAC+AGG | + | chr1_2:59602538-59602557 | Msa0081070:intron | 30.0% |
| TGAATGATGCTAAAGCTAAA+GGG | + | chr1_2:59602570-59602589 | Msa0081070:CDS | 30.0% | |
| CGGTAAGAAGAAAAAATAGT+TGG | + | chr1_2:59602619-59602638 | Msa0081070:exon | 30.0% | |
| AGTTGGATTTGTATCTTAGA+TGG | + | chr1_2:59602636-59602655 | Msa0081070:exon | 30.0% | |
| GTTGGATTTGTATCTTAGAT+GGG | + | chr1_2:59602637-59602656 | Msa0081070:exon | 30.0% | |
| AGATGTTAATAGGTGCAAAA+GGG | - | chr1_2:59602736-59602755 | None:intergenic | 30.0% | |
| TAGATGTTAATAGGTGCAAA+AGG | - | chr1_2:59602737-59602756 | None:intergenic | 30.0% | |
| ! | ATGATTCTACCTCTTTTCTT+TGG | + | chr1_2:59602756-59602775 | Msa0081070:intron | 30.0% |
| TGCAAAAAACCAAAGAAAAG+AGG | - | chr1_2:59602768-59602787 | None:intergenic | 30.0% | |
| !!! | TTTCTTTGGTTTTTTGCAGT+TGG | + | chr1_2:59602770-59602789 | Msa0081070:intron | 30.0% |
| TAATGTGAATTGGAGTGTGA+CGG | - | chr1_2:59596623-59596642 | None:intergenic | 35.0% | |
| TTGCAGAGGATAATGTGAAT+TGG | - | chr1_2:59596633-59596652 | None:intergenic | 35.0% | |
| GTTTGAATGAGAATTTGCAG+AGG | - | chr1_2:59596647-59596666 | None:intergenic | 35.0% | |
| TCAAACAACGATGGGTATTA+AGG | + | chr1_2:59596661-59596680 | Msa0081070:exon | 35.0% | |
| TAATGCTCCCAAATCAATGA+AGG | + | chr1_2:59596822-59596841 | Msa0081070:CDS | 35.0% | |
| TAGCATCAACAGCAATCTTA+CGG | - | chr1_2:59596873-59596892 | None:intergenic | 35.0% | |
| TGAAACCACTTACAAGAAAC+TGG | - | chr1_2:59596909-59596928 | None:intergenic | 35.0% | |
| ! | GAAATGTTGACTAATGAAGC+TGG | + | chr1_2:59597019-59597038 | Msa0081070:CDS | 35.0% |
| AGATAAGCTTAATCCCTGTT+TGG | + | chr1_2:59597091-59597110 | Msa0081070:intron | 35.0% | |
| ATAAGTTTCGTGAGACTGTT+TGG | - | chr1_2:59597298-59597317 | None:intergenic | 35.0% | |
| TCAAATAACCTGATCCAAAC+AGG | + | chr1_2:59597332-59597351 | Msa0081070:intron | 35.0% | |
| ! | GCATTGGTAAAAATCGACAA+GGG | - | chr1_2:59597586-59597605 | None:intergenic | 35.0% |
| !! | AGCATTGGTAAAAATCGACA+AGG | - | chr1_2:59597587-59597606 | None:intergenic | 35.0% |
| CTTCCCATCAAAAACATATC+TGG | - | chr1_2:59597615-59597634 | None:intergenic | 35.0% | |
| !! | GAAAAAACGGTATTTTTGCG+GGG | + | chr1_2:59597661-59597680 | Msa0081070:intron | 35.0% |
| ! | GAGGTATATGCATAGTTTGT+TGG | + | chr1_2:59597815-59597834 | Msa0081070:intron | 35.0% |
| AAATCAGGATATTCATCCCT+TGG | + | chr1_2:59597878-59597897 | Msa0081070:intron | 35.0% | |
| TGACAACAAAGATCAACCAA+GGG | - | chr1_2:59597897-59597916 | None:intergenic | 35.0% | |
| ATGACAACAAAGATCAACCA+AGG | - | chr1_2:59597898-59597917 | None:intergenic | 35.0% | |
| TGTACAATGAGTTCACCATT+TGG | + | chr1_2:59598188-59598207 | Msa0081070:intron | 35.0% | |
| ! | AATTTGAAGCCTTAGCCAAA+TGG | - | chr1_2:59598206-59598225 | None:intergenic | 35.0% |
| ! | AATCCTTTTCATACAGACCA+TGG | + | chr1_2:59598347-59598366 | Msa0081070:intron | 35.0% |
| TTTCCATGGTCTGTATGAAA+AGG | - | chr1_2:59598353-59598372 | None:intergenic | 35.0% | |
| ! | TCCTTTTCAAACACACTTCA+TGG | + | chr1_2:59598501-59598520 | Msa0081070:intron | 35.0% |
| TCCATGAAGTGTGTTTGAAA+AGG | - | chr1_2:59598505-59598524 | None:intergenic | 35.0% | |
| ACGATGTTACATAACAATGG+AGG | - | chr1_2:59598655-59598674 | None:intergenic | 35.0% | |
| AAAATATCTCATGGAGTGTG+AGG | - | chr1_2:59598714-59598733 | None:intergenic | 35.0% | |
| ! | ACTCCATGAGATATTTTCTC+TGG | + | chr1_2:59598717-59598736 | Msa0081070:intron | 35.0% |
| CAACCAGAGAAAATATCTCA+TGG | - | chr1_2:59598723-59598742 | None:intergenic | 35.0% | |
| ! | GAAGGAAATAGCTTTTCACT+TGG | + | chr1_2:59598869-59598888 | Msa0081070:intron | 35.0% |
| TTGGAGATAGAGATTCGTTT+AGG | + | chr1_2:59598888-59598907 | Msa0081070:intron | 35.0% | |
| AGATACGAAAAGTAGGTTTG+CGG | + | chr1_2:59598935-59598954 | Msa0081070:intron | 35.0% | |
| ATAGAAGGTAACAGGAAGAA+TGG | - | chr1_2:59599028-59599047 | None:intergenic | 35.0% | |
| TTCTTCCTGTTACCTTCTAT+TGG | + | chr1_2:59599028-59599047 | Msa0081070:intron | 35.0% | |
| GAATGAAAACCACCAATAGA+AGG | - | chr1_2:59599043-59599062 | None:intergenic | 35.0% | |
| ATTTAAGAAGACCTTAAGGG+AGG | + | chr1_2:59599183-59599202 | Msa0081070:intron | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | + | chr1_2:59599355-59599374 | Msa0081070:intron | 35.0% | |
| TATTATACAGGTGTATGCTG+TGG | + | chr1_2:59599491-59599510 | Msa0081070:intron | 35.0% | |
| TTGAACTAGGATCCATTAGA+TGG | - | chr1_2:59599566-59599585 | None:intergenic | 35.0% | |
| ACTGGAATCTTCTTTGAACT+AGG | - | chr1_2:59599579-59599598 | None:intergenic | 35.0% | |
| AATGGAATTTGACGTTGCAA+AGG | + | chr1_2:59599599-59599618 | Msa0081070:CDS | 35.0% | |
| TTGAAAGCAGTCAAGGATAA+CGG | - | chr1_2:59599626-59599645 | None:intergenic | 35.0% | |
| ! | TCTCATGTTTCAGATTTTGG+AGG | + | chr1_2:59599689-59599708 | Msa0081070:intron | 35.0% |
| TAATAATCAATGTGTGCCAC+AGG | + | chr1_2:59599883-59599902 | Msa0081070:intron | 35.0% | |
| !!! | TTTTTTCAATAGAGCCGTGT+TGG | - | chr1_2:59599942-59599961 | None:intergenic | 35.0% |
| CGGCTCTATTGAAAAAATAC+TGG | + | chr1_2:59599945-59599964 | Msa0081070:CDS | 35.0% | |
| TGGAAAACATAAGCAAAGAG+AGG | + | chr1_2:59599965-59599984 | Msa0081070:CDS | 35.0% | |
| !!! | TTTTCAAGTGCATGCAATAG+AGG | + | chr1_2:59600019-59600038 | Msa0081070:intron | 35.0% |
| TGCATTACGAATCAGATATC+TGG | + | chr1_2:59600072-59600091 | Msa0081070:intron | 35.0% | |
| AGATATCTGGCCTGTATATT+TGG | + | chr1_2:59600085-59600104 | Msa0081070:intron | 35.0% | |
| GTTATTACTTCTTCATCTGG+AGG | - | chr1_2:59600337-59600356 | None:intergenic | 35.0% | |
| AGTATTCTTTCAAAGGGACA+AGG | + | chr1_2:59600377-59600396 | Msa0081070:intron | 35.0% | |
| TTGCATGTTGTCTTTCTTAC+AGG | + | chr1_2:59600465-59600484 | Msa0081070:intron | 35.0% | |
| TGCATGTTGTCTTTCTTACA+GGG | + | chr1_2:59600466-59600485 | Msa0081070:intron | 35.0% | |
| ! | AGAATGGGTTCAAAAGTGAT+AGG | + | chr1_2:59600512-59600531 | Msa0081070:CDS | 35.0% |
| ! | GAATGGGTTCAAAAGTGATA+GGG | + | chr1_2:59600513-59600532 | Msa0081070:CDS | 35.0% |
| ! | TCTTTCTGGAAATACCAGAT+TGG | + | chr1_2:59600749-59600768 | Msa0081070:intron | 35.0% |
| ATCCATCAGTACCTATCAAA+CGG | + | chr1_2:59600796-59600815 | Msa0081070:CDS | 35.0% | |
| GAATGTTTAACACATAGTGG+AGG | - | chr1_2:59600855-59600874 | None:intergenic | 35.0% | |
| ATTCTCCACCAGAACATTTA+TGG | + | chr1_2:59600900-59600919 | Msa0081070:intron | 35.0% | |
| AAGTCTGACCATAAATGTTC+TGG | - | chr1_2:59600911-59600930 | None:intergenic | 35.0% | |
| AAGAGGATGAAAATTAAGCG+AGG | - | chr1_2:59601038-59601057 | None:intergenic | 35.0% | |
| CATCGATATGACATCATAAG+AGG | - | chr1_2:59601055-59601074 | None:intergenic | 35.0% | |
| CAATTTAATGCGACGTATCA+TGG | - | chr1_2:59601096-59601115 | None:intergenic | 35.0% | |
| !!! | GCATTTTAAAGTCCGAGATA+TGG | + | chr1_2:59601138-59601157 | Msa0081070:intron | 35.0% |
| ! | GTGAACAAATGATGGGATAA+AGG | - | chr1_2:59601299-59601318 | None:intergenic | 35.0% |
| CCAGTTAGTGAACAAATGAT+GGG | - | chr1_2:59601306-59601325 | None:intergenic | 35.0% | |
| TCCAGTTAGTGAACAAATGA+TGG | - | chr1_2:59601307-59601326 | None:intergenic | 35.0% | |
| AAATAAAGGAACACAAAGGG+GGG | - | chr1_2:59601351-59601370 | None:intergenic | 35.0% | |
| !! | AAAATTGAAGTACCGGAAAC+AGG | + | chr1_2:59601417-59601436 | Msa0081070:intron | 35.0% |
| GACATCTTATGATCAATTGC+CGG | - | chr1_2:59601542-59601561 | None:intergenic | 35.0% | |
| TTGGAACACAGACTATAGAT+CGG | - | chr1_2:59601620-59601639 | None:intergenic | 35.0% | |
| TAAAACTACATCAGGCCTTA+CGG | + | chr1_2:59601788-59601807 | Msa0081070:intron | 35.0% | |
| !! | TAACTCTGAAATGTTGTTCC+TGG | + | chr1_2:59601857-59601876 | Msa0081070:intron | 35.0% |
| AAAGGAACTAAAGTGAAACC+AGG | - | chr1_2:59601878-59601897 | None:intergenic | 35.0% | |
| AGCATAAGTATATAGGCTTC+TGG | + | chr1_2:59601898-59601917 | Msa0081070:intron | 35.0% | |
| ! | GAAACAAGTTCCCATTGATT+AGG | + | chr1_2:59601975-59601994 | Msa0081070:intron | 35.0% |
| CTTGTTTCAAGCCTAATCAA+TGG | - | chr1_2:59601989-59602008 | None:intergenic | 35.0% | |
| ! | TGTTTGAGATTGAGGCTTAT+TGG | - | chr1_2:59602129-59602148 | None:intergenic | 35.0% |
| ATATGAGAAGTAATCTCCAG+TGG | + | chr1_2:59602302-59602321 | Msa0081070:intron | 35.0% | |
| ! | TGAGTATCTAAAACTACCAC+TGG | - | chr1_2:59602321-59602340 | None:intergenic | 35.0% |
| AGGCTTCTTGTTAGAAGATA+TGG | - | chr1_2:59602391-59602410 | None:intergenic | 35.0% | |
| !! | TATCCGCGTGTATTTTGAAA+AGG | - | chr1_2:59602427-59602446 | None:intergenic | 35.0% |
| !!! | TGTTACTGTTTTGGTTCTGT+AGG | + | chr1_2:59602502-59602521 | Msa0081070:intron | 35.0% |
| ! | AAAGAGTACATGTCAAACCA+TGG | - | chr1_2:59602529-59602548 | None:intergenic | 35.0% |
| !! | TTAGCTTTAGCATCATTCAC+TGG | - | chr1_2:59602569-59602588 | None:intergenic | 35.0% |
| GTGAATGATGCTAAAGCTAA+AGG | + | chr1_2:59602569-59602588 | Msa0081070:CDS | 35.0% | |
| AGGGAGTAACAAGAAAACTA+AGG | + | chr1_2:59602589-59602608 | Msa0081070:CDS | 35.0% | |
| AGTAACAAGAAAACTAAGGC+CGG | + | chr1_2:59602593-59602612 | Msa0081070:CDS | 35.0% | |
| AAACATCTACAACACTAACC+TGG | - | chr1_2:59602683-59602702 | None:intergenic | 35.0% | |
| AAGGGACAGTCACAAAAATT+AGG | - | chr1_2:59602718-59602737 | None:intergenic | 35.0% | |
| TTGTGATACAATGCTTCATG+TGG | + | chr1_2:59602900-59602919 | Msa0081070:three_prime_UTR | 35.0% | |
| TGACGGCAGAAAGATGAATA+AGG | - | chr1_2:59596606-59596625 | None:intergenic | 40.0% | |
| ! | GGGTTTAACGAAGCTTTTAG+CGG | + | chr1_2:59596798-59596817 | Msa0081070:intron | 40.0% |
| TAGATTGTTGTGGGAAGAAG+TGG | + | chr1_2:59596992-59597011 | Msa0081070:intron | 40.0% | |
| ATGAAGCTGGTGAAGTTACT+AGG | + | chr1_2:59597032-59597051 | Msa0081070:CDS | 40.0% | |
| !! | GCCGTTTTCATAAGCTATCT+TGG | + | chr1_2:59597214-59597233 | Msa0081070:intron | 40.0% |
| AACACAATTAAGGGCCTGTT+TGG | - | chr1_2:59597349-59597368 | None:intergenic | 40.0% | |
| ATTTGCAAGGAATGTTTGCG+CGG | + | chr1_2:59597449-59597468 | Msa0081070:CDS | 40.0% | |
| ! | ACAATCAGACTTCTAGAAGC+CGG | + | chr1_2:59597472-59597491 | Msa0081070:CDS | 40.0% |
| ACATATCTGGATACGAGCAT+TGG | - | chr1_2:59597602-59597621 | None:intergenic | 40.0% | |
| AGCTCTTGATTCTTCATCTC+CGG | - | chr1_2:59597641-59597660 | None:intergenic | 40.0% | |
| ! | TTGTTGGCGACTTTTCTATG+TGG | + | chr1_2:59597831-59597850 | Msa0081070:intron | 40.0% |
| ATTCAGTAAACGGACAGTGA+AGG | + | chr1_2:59597949-59597968 | Msa0081070:CDS | 40.0% | |
| ATGAGTTCACCATTTGGCTA+AGG | + | chr1_2:59598194-59598213 | Msa0081070:intron | 40.0% | |
| TCTTCCACTCTTTGCAAAAC+TGG | + | chr1_2:59598407-59598426 | Msa0081070:intron | 40.0% | |
| CACTCTTTGCAAAACTGGAA+CGG | + | chr1_2:59598412-59598431 | Msa0081070:intron | 40.0% | |
| AATTACACTCACCTCCCTTT+AGG | + | chr1_2:59598548-59598567 | Msa0081070:intron | 40.0% | |
| TAATATACCACGGTCTAGCA+TGG | - | chr1_2:59598749-59598768 | None:intergenic | 40.0% | |
| CACAATAATTCGCCATTGCT+TGG | - | chr1_2:59598820-59598839 | None:intergenic | 40.0% | |
| CAATGGCGAATTATTGTGAC+CGG | + | chr1_2:59598822-59598841 | Msa0081070:intron | 40.0% | |
| AATTATTGTGACCGGTGGTA+TGG | + | chr1_2:59598830-59598849 | Msa0081070:intron | 40.0% | |
| ! | GGTGTCGTATGAACAAATGA+AGG | + | chr1_2:59598851-59598870 | Msa0081070:intron | 40.0% |
| GAGATAGAGATTCGTTTAGG+TGG | + | chr1_2:59598891-59598910 | Msa0081070:intron | 40.0% | |
| TTCCTGTTACCTTCTATTGG+TGG | + | chr1_2:59599031-59599050 | Msa0081070:intron | 40.0% | |
| AACCACCAATAGAAGGTAAC+AGG | - | chr1_2:59599036-59599055 | None:intergenic | 40.0% | |
| ! | GTGGTTTTCATTCGCAATGT+GGG | + | chr1_2:59599050-59599069 | Msa0081070:intron | 40.0% |
| ! | TTTTCATTCGCAATGTGGGT+GGG | + | chr1_2:59599054-59599073 | Msa0081070:intron | 40.0% |
| ! | GTGCTTGAGAGTATAACCAA+TGG | + | chr1_2:59599082-59599101 | Msa0081070:intron | 40.0% |
| ! | TGAGAGTATAACCAATGGTG+CGG | + | chr1_2:59599087-59599106 | Msa0081070:intron | 40.0% |
| AATTACACTCACCTCCCTTA+AGG | - | chr1_2:59599197-59599216 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | + | chr1_2:59599356-59599375 | Msa0081070:intron | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | + | chr1_2:59599357-59599376 | Msa0081070:intron | 40.0% | |
| GACATGGATTCCTTAACGTT+TGG | + | chr1_2:59599522-59599541 | Msa0081070:CDS | 40.0% | |
| TTTAGGAGCTCCAAACGTTA+AGG | - | chr1_2:59599535-59599554 | None:intergenic | 40.0% | |
| GCAACGTCAAATTCCATTAC+TGG | - | chr1_2:59599597-59599616 | None:intergenic | 40.0% | |
| GATTACTGTGACAACATTCG+AGG | + | chr1_2:59599765-59599784 | Msa0081070:CDS | 40.0% | |
| !! | TTTGTCCCGCTTTTATCCAA+CGG | + | chr1_2:59599793-59599812 | Msa0081070:intron | 40.0% |
| !! | TTCAAGTTTACCACCGATTC+AGG | + | chr1_2:59600212-59600231 | Msa0081070:intron | 40.0% |
| !! | ACGACTTTTTAAAGAGCCAG+AGG | + | chr1_2:59600273-59600292 | Msa0081070:CDS | 40.0% |
| GCATGTTGTCTTTCTTACAG+GGG | + | chr1_2:59600467-59600486 | Msa0081070:intron | 40.0% | |
| CAAAAGTGATAGGGTGACAA+AGG | + | chr1_2:59600522-59600541 | Msa0081070:CDS | 40.0% | |
| GCAAAGAACAAGTCATCACA+AGG | + | chr1_2:59600658-59600677 | Msa0081070:CDS | 40.0% | |
| GCACGACAAGACAATAGAAA+AGG | - | chr1_2:59600722-59600741 | None:intergenic | 40.0% | |
| !! | TTCCGTTTGATAGGTACTGA+TGG | - | chr1_2:59600801-59600820 | None:intergenic | 40.0% |
| ATCAGTACCTATCAAACGGA+AGG | + | chr1_2:59600800-59600819 | Msa0081070:CDS | 40.0% | |
| GTACATACCTTCCGTTTGAT+AGG | - | chr1_2:59600810-59600829 | None:intergenic | 40.0% | |
| ! | CAAAATTGTTGTTGAAGGCC+TGG | + | chr1_2:59600874-59600893 | Msa0081070:intron | 40.0% |
| TCTGACCATAAATGTTCTGG+TGG | - | chr1_2:59600908-59600927 | None:intergenic | 40.0% | |
| CCCATCATTTGTTCACTAAC+TGG | + | chr1_2:59601303-59601322 | Msa0081070:intron | 40.0% | |
| CGTGCTTAGATCTTTCAAAC+CGG | + | chr1_2:59601520-59601539 | Msa0081070:CDS | 40.0% | |
| TGCGAATTTCTAACTGCTCA+AGG | + | chr1_2:59601567-59601586 | Msa0081070:CDS | 40.0% | |
| AGACAATGGCATGGAAAGAT+TGG | - | chr1_2:59601639-59601658 | None:intergenic | 40.0% | |
| ATTGACATTGAAGGTTCACC+AGG | - | chr1_2:59601697-59601716 | None:intergenic | 40.0% | |
| AGTCATCTCTGCCTAATCAA+TGG | - | chr1_2:59602015-59602034 | None:intergenic | 40.0% | |
| ATTGATTAGGCAGAGATGAC+TGG | + | chr1_2:59602014-59602033 | Msa0081070:intron | 40.0% | |
| ! | GAACAGGTTGTTTGAGATTG+AGG | - | chr1_2:59602137-59602156 | None:intergenic | 40.0% |
| ! | GAAAAGGCTGTTGCTTCATT+AGG | - | chr1_2:59602411-59602430 | None:intergenic | 40.0% |
| ! | CAGCCTTTTCAAAATACACG+CGG | + | chr1_2:59602421-59602440 | Msa0081070:intron | 40.0% |
| !!! | TTTTTTCTTCTTACCGCCAC+CGG | - | chr1_2:59602615-59602634 | None:intergenic | 40.0% |
| GAGTCATTTACATGTTGACC+AGG | + | chr1_2:59602662-59602681 | Msa0081070:three_prime_UTR | 40.0% | |
| GGACAGTCACAAAAATTAGG+TGG | - | chr1_2:59602715-59602734 | None:intergenic | 40.0% | |
| !!! | GTTTTTTGCAGTTGGCATGA+AGG | + | chr1_2:59602778-59602797 | Msa0081070:intron | 40.0% |
| ATTAAGGGCCTGTTTGGATC+AGG | - | chr1_2:59597343-59597362 | None:intergenic | 45.0% | |
| ! | CAATCAGACTTCTAGAAGCC+GGG | + | chr1_2:59597473-59597492 | Msa0081070:CDS | 45.0% |
| !! | GAATTACACTGGCTTCATCC+CGG | - | chr1_2:59597494-59597513 | None:intergenic | 45.0% |
| !! | TGTTTTTGATGGGAAGCCAC+CGG | + | chr1_2:59597619-59597638 | Msa0081070:CDS | 45.0% |
| TCTTGATTCTTCATCTCCGG+TGG | - | chr1_2:59597638-59597657 | None:intergenic | 45.0% | |
| GTCATTTCAGGCTGACAACA+AGG | + | chr1_2:59597913-59597932 | Msa0081070:intron | 45.0% | |
| GCTAAGGCTTCAAATTCTGC+AGG | + | chr1_2:59598210-59598229 | Msa0081070:intron | 45.0% | |
| TGCACTTTGCAAAGCTGGAA+AGG | + | chr1_2:59598261-59598280 | Msa0081070:CDS | 45.0% | |
| ! | CGTTCCAGTTTTGCAAAGAG+TGG | - | chr1_2:59598414-59598433 | None:intergenic | 45.0% |
| GAGCTTAAAGCTCCAAGCAA+TGG | + | chr1_2:59598805-59598824 | Msa0081070:intron | 45.0% | |
| TTCATACGACACCATACCAC+CGG | - | chr1_2:59598844-59598863 | None:intergenic | 45.0% | |
| TGCGGAGAGGATTAAAAACG+TGG | + | chr1_2:59598953-59598972 | Msa0081070:intron | 45.0% | |
| GCGGAGAGGATTAAAAACGT+GGG | + | chr1_2:59598954-59598973 | Msa0081070:intron | 45.0% | |
| ! | GGTGGTTTTCATTCGCAATG+TGG | + | chr1_2:59599049-59599068 | Msa0081070:intron | 45.0% |
| ! | GTTTTCATTCGCAATGTGGG+TGG | + | chr1_2:59599053-59599072 | Msa0081070:intron | 45.0% |
| TTTCATTCGCAATGTGGGTG+GGG | + | chr1_2:59599055-59599074 | Msa0081070:intron | 45.0% | |
| GACAATAATAGCCGCACCAT+TGG | - | chr1_2:59599101-59599120 | None:intergenic | 45.0% | |
| TGAGCTTAGCTCAGTTGGAA+TGG | + | chr1_2:59599328-59599347 | Msa0081070:intron | 45.0% | |
| !!! | TATATTTTTGGTGGTGGCCG+AGG | - | chr1_2:59599389-59599408 | None:intergenic | 45.0% |
| !! | TTGTCCCGCTTTTATCCAAC+GGG | + | chr1_2:59599794-59599813 | Msa0081070:intron | 45.0% |
| TAGCACCCGTTGGATAAAAG+CGG | - | chr1_2:59599802-59599821 | None:intergenic | 45.0% | |
| TCAATGTGTGCCACAGGTAT+TGG | + | chr1_2:59599889-59599908 | Msa0081070:intron | 45.0% | |
| CAATGTGTGCCACAGGTATT+GGG | + | chr1_2:59599890-59599909 | Msa0081070:intron | 45.0% | |
| ! | AATGTGTGCCACAGGTATTG+GGG | + | chr1_2:59599891-59599910 | Msa0081070:intron | 45.0% |
| TCATCATCAGTTGTGACCTC+TGG | - | chr1_2:59600292-59600311 | None:intergenic | 45.0% | |
| AGAACAAGTCATCACAAGGC+CGG | + | chr1_2:59600662-59600681 | Msa0081070:CDS | 45.0% | |
| GTCGTGCCTAACTTTCTTTC+TGG | + | chr1_2:59600735-59600754 | Msa0081070:intron | 45.0% | |
| !! | GGTACTGATGGATTTGCAGT+TGG | - | chr1_2:59600789-59600808 | None:intergenic | 45.0% |
| AGTGGAGGTGATAGATGTAG+TGG | - | chr1_2:59600840-59600859 | None:intergenic | 45.0% | |
| !! | ACACTGATTTGTGTGGCAAC+TGG | + | chr1_2:59601264-59601283 | Msa0081070:intron | 45.0% |
| GCAGTTAGAAATTCGCAGAG+AGG | - | chr1_2:59601564-59601583 | None:intergenic | 45.0% | |
| TTCTAACTGCTCAAGGTCCA+TGG | + | chr1_2:59601574-59601593 | Msa0081070:CDS | 45.0% | |
| ! | TGCTCAAGGTCCATGGTTTT+TGG | + | chr1_2:59601581-59601600 | Msa0081070:intron | 45.0% |
| TATAGATCGGCATGCTCAAC+TGG | - | chr1_2:59601607-59601626 | None:intergenic | 45.0% | |
| CTTTCCATGCCATTGTCTAG+AGG | + | chr1_2:59601641-59601660 | Msa0081070:intron | 45.0% | |
| AAGCAGACACCTCTAGACAA+TGG | - | chr1_2:59601653-59601672 | None:intergenic | 45.0% | |
| !! | TTGTCTAGAGGTGTCTGCTT+TGG | + | chr1_2:59601653-59601672 | Msa0081070:intron | 45.0% |
| !!! | GTTTTGGTTCTGTAGGTCCA+TGG | + | chr1_2:59602509-59602528 | Msa0081070:intron | 45.0% |
| AACAAGAAAACTAAGGCCGG+TGG | + | chr1_2:59602596-59602615 | Msa0081070:CDS | 45.0% | |
| ! | TTTTGCAGTTGGCATGAAGG+AGG | + | chr1_2:59602781-59602800 | Msa0081070:intron | 45.0% |
| TTTGCAGTTGGCATGAAGGA+GGG | + | chr1_2:59602782-59602801 | Msa0081070:intron | 45.0% | |
| !!! | TTCAATTTTTAATATTATAA+TGG | + | chr1_2:59598012-59598031 | Msa0081070:intron | 5.0% |
| TGCAACGTCACCTCAACAAC+AGG | - | chr1_2:59598146-59598165 | None:intergenic | 50.0% | |
| CATTGAGCCTCTGCTTCTGA+GGG | - | chr1_2:59598238-59598257 | None:intergenic | 50.0% | |
| ACATTGAGCCTCTGCTTCTG+AGG | - | chr1_2:59598239-59598258 | None:intergenic | 50.0% | |
| TGTGCTGCACTTTGCAAAGC+TGG | + | chr1_2:59598256-59598275 | Msa0081070:CDS | 50.0% | |
| ATCTCATGGAGTGTGAGGCA+GGG | - | chr1_2:59598709-59598728 | None:intergenic | 50.0% | |
| TATCTCATGGAGTGTGAGGC+AGG | - | chr1_2:59598710-59598729 | None:intergenic | 50.0% | |
| ! | GTTGATTCCATGCTAGACCG+TGG | + | chr1_2:59598739-59598758 | Msa0081070:intron | 50.0% |
| GTTAACATGTGGGACGAGCT+TGG | + | chr1_2:59598775-59598794 | Msa0081070:intron | 50.0% | |
| TGGCGAATTATTGTGACCGG+TGG | + | chr1_2:59598825-59598844 | Msa0081070:intron | 50.0% | |
| CGAAAAGTAGGTTTGCGGAG+AGG | + | chr1_2:59598940-59598959 | Msa0081070:intron | 50.0% | |
| ! | TGCTGTGGCTTCTGAAGACA+TGG | + | chr1_2:59599506-59599525 | Msa0081070:CDS | 50.0% |
| GGAGGAGCTAGATTTGACCA+TGG | + | chr1_2:59599707-59599726 | Msa0081070:CDS | 50.0% | |
| AGCACCCGTTGGATAAAAGC+GGG | - | chr1_2:59599801-59599820 | None:intergenic | 50.0% | |
| ! | GCTTTTATCCAACGGGTGCT+AGG | + | chr1_2:59599801-59599820 | Msa0081070:intron | 50.0% |
| !! | ATGTGTGCCACAGGTATTGG+GGG | + | chr1_2:59599892-59599911 | Msa0081070:intron | 50.0% |
| CTGAAGCTCATACGCCAACA+CGG | + | chr1_2:59599925-59599944 | Msa0081070:CDS | 50.0% | |
| !! | TTACCACCGATTCAGGTACC+AGG | + | chr1_2:59600219-59600238 | Msa0081070:intron | 50.0% |
| CTGGTACCTGGTACCTGAAT+CGG | - | chr1_2:59600228-59600247 | None:intergenic | 50.0% | |
| GGTACCAGGTACCAGATGAT+TGG | + | chr1_2:59600233-59600252 | Msa0081070:intron | 50.0% | |
| ! | ACCAGATGATTGGCCGTATC+AGG | + | chr1_2:59600243-59600262 | Msa0081070:CDS | 50.0% |
| TCCTGATACGGCCAATCATC+TGG | - | chr1_2:59600247-59600266 | None:intergenic | 50.0% | |
| ! | AGATGATTGGCCGTATCAGG+AGG | + | chr1_2:59600246-59600265 | Msa0081070:CDS | 50.0% |
| GTTCTGGTGGAGAATTTGCC+AGG | - | chr1_2:59600895-59600914 | None:intergenic | 50.0% | |
| GCTCAACTGGCCAAAAACCA+TGG | - | chr1_2:59601594-59601613 | None:intergenic | 50.0% | |
| GACACCTCTAGACAATGGCA+TGG | - | chr1_2:59601648-59601667 | None:intergenic | 50.0% | |
| TGCCTGAAGCTGAATAGACC+TGG | + | chr1_2:59601676-59601695 | Msa0081070:intron | 50.0% | |
| CACCAGGTCTATTCAGCTTC+AGG | - | chr1_2:59601681-59601700 | None:intergenic | 50.0% | |
| AAGAAAACTAAGGCCGGTGG+CGG | + | chr1_2:59602599-59602618 | Msa0081070:CDS | 50.0% | |
| ! | CACCTTTACAGGAGAGTGCG+CGG | + | chr1_2:59596559-59596578 | Msa0081070:five_prime_UTR | 55.0% |
| ! | ACCTTTACAGGAGAGTGCGC+GGG | + | chr1_2:59596560-59596579 | Msa0081070:five_prime_UTR | 55.0% |
| CAGTCTCTCAAAGAGAGCCG+AGG | + | chr1_2:59597766-59597785 | Msa0081070:intron | 55.0% | |
| TAGAGCTTCCGTCAAACCCG+CGG | - | chr1_2:59597795-59597814 | None:intergenic | 55.0% | |
| ! | GGGTTTGACGGAAGCTCTAG+AGG | + | chr1_2:59597796-59597815 | Msa0081070:CDS | 55.0% |
| !! | CATGGGAGTGCCTGTTGTTG+AGG | + | chr1_2:59598133-59598152 | Msa0081070:CDS | 55.0% |
| TGTGAGGCAGGGGAAAATGG+AGG | - | chr1_2:59598698-59598717 | None:intergenic | 55.0% | |
| GAGTGTGAGGCAGGGGAAAA+TGG | - | chr1_2:59598701-59598720 | None:intergenic | 55.0% | |
| TCTCATGGAGTGTGAGGCAG+GGG | - | chr1_2:59598708-59598727 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr1_2:59599326-59599345 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr1_2:59599323-59599342 | Msa0081070:intron | 55.0% | |
| AGCTTGAACCTAGCACCCGT+TGG | - | chr1_2:59599812-59599831 | None:intergenic | 55.0% | |
| !! | TGTGTGCCACAGGTATTGGG+GGG | + | chr1_2:59599893-59599912 | Msa0081070:intron | 55.0% |
| TGTCATCCCCCCAATACCTG+TGG | - | chr1_2:59599902-59599921 | None:intergenic | 55.0% | |
| GTACCTGGTACCTGAATCGG+TGG | - | chr1_2:59600225-59600244 | None:intergenic | 55.0% | |
| ACGGCCAATCATCTGGTACC+TGG | - | chr1_2:59600240-59600259 | None:intergenic | 55.0% | |
| AGTCGTCGAGCCTCCTGATA+CGG | - | chr1_2:59600259-59600278 | None:intergenic | 55.0% | |
| CTTACGGTGCTCGACTGCTA+GGG | + | chr1_2:59601804-59601823 | Msa0081070:intron | 55.0% | |
| TCCCGCGCACTCTCCTGTAA+AGG | - | chr1_2:59596564-59596583 | None:intergenic | 60.0% | |
| AAAGAGAGCCGAGGCTACCG+CGG | + | chr1_2:59597775-59597794 | Msa0081070:CDS | 60.0% | |
| AAGGTCCGGGGTTCGAACCT+CGG | + | chr1_2:59599369-59599388 | Msa0081070:intron | 60.0% | |
| ! | CCTAGCAGTCGAGCACCGTA+AGG | - | chr1_2:59601806-59601825 | None:intergenic | 60.0% |
| CCTTACGGTGCTCGACTGCT+AGG | + | chr1_2:59601803-59601822 | Msa0081070:intron | 60.0% | |
| AAGAGAGCCGAGGCTACCGC+GGG | + | chr1_2:59597776-59597795 | Msa0081070:CDS | 65.0% | |
| CGTCAAACCCGCGGTAGCCT+CGG | - | chr1_2:59597786-59597805 | None:intergenic | 65.0% | |
| CGAGGCTACCGCGGGTTTGA+CGG | + | chr1_2:59597784-59597803 | Msa0081070:CDS | 65.0% | |
| GCAGGCACCCTCAGAAGCAG+AGG | + | chr1_2:59598228-59598247 | Msa0081070:intron | 65.0% | |
| GGTGGCCGAGGTTCGAACCC+CGG | - | chr1_2:59599377-59599396 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 59596552 | 59602978 | 59596552 | ID=Msa0081070;Name=Msa0081070 |
| chr1_2 | mRNA | 59596552 | 59602978 | 59596552 | ID=Msa0081070-mRNA-1;Parent=Msa0081070;Name=Msa0081070-mRNA-1;_AED=0.28;_eAED=0.28;_QI=119|0.94|0.94|1|0.94|0.94|19|236|413 |
| chr1_2 | exon | 59596552 | 59596682 | 59596552 | ID=Msa0081070-mRNA-1:exon:19311;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59596799 | 59596915 | 59596799 | ID=Msa0081070-mRNA-1:exon:19312;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59596995 | 59597053 | 59596995 | ID=Msa0081070-mRNA-1:exon:19313;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59597447 | 59597506 | 59597447 | ID=Msa0081070-mRNA-1:exon:19314;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59597616 | 59597669 | 59597616 | ID=Msa0081070-mRNA-1:exon:19315;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59597769 | 59597817 | 59597769 | ID=Msa0081070-mRNA-1:exon:19316;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59597923 | 59597970 | 59597923 | ID=Msa0081070-mRNA-1:exon:19317;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59598089 | 59598154 | 59598089 | ID=Msa0081070-mRNA-1:exon:19318;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59598232 | 59598282 | 59598232 | ID=Msa0081070-mRNA-1:exon:19319;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59599501 | 59599620 | 59599501 | ID=Msa0081070-mRNA-1:exon:19320;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59599702 | 59599786 | 59599702 | ID=Msa0081070-mRNA-1:exon:19321;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59599905 | 59599986 | 59599905 | ID=Msa0081070-mRNA-1:exon:19322;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59600234 | 59600348 | 59600234 | ID=Msa0081070-mRNA-1:exon:19323;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59600487 | 59600543 | 59600487 | ID=Msa0081070-mRNA-1:exon:19324;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59600637 | 59600683 | 59600637 | ID=Msa0081070-mRNA-1:exon:19325;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59600767 | 59600821 | 59600767 | ID=Msa0081070-mRNA-1:exon:19326;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59601509 | 59601595 | 59601509 | ID=Msa0081070-mRNA-1:exon:19327;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59602560 | 59602683 | 59602560 | ID=Msa0081070-mRNA-1:exon:19328;Parent=Msa0081070-mRNA-1 |
| chr1_2 | exon | 59602789 | 59602978 | 59602789 | ID=Msa0081070-mRNA-1:exon:19329;Parent=Msa0081070-mRNA-1 |
| chr1_2 | five_prime_UTR | 59596552 | 59596670 | 59596552 | ID=Msa0081070-mRNA-1:five_prime_utr;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59596671 | 59596682 | 59596671 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59596799 | 59596915 | 59596799 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59596995 | 59597053 | 59596995 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59597447 | 59597506 | 59597447 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59597616 | 59597669 | 59597616 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59597769 | 59597817 | 59597769 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59597923 | 59597970 | 59597923 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59598089 | 59598154 | 59598089 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59598232 | 59598282 | 59598232 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59599501 | 59599620 | 59599501 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59599702 | 59599786 | 59599702 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59599905 | 59599986 | 59599905 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59600234 | 59600348 | 59600234 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59600487 | 59600543 | 59600487 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59600637 | 59600683 | 59600637 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59600767 | 59600821 | 59600767 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59601509 | 59601595 | 59601509 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | CDS | 59602560 | 59602637 | 59602560 | ID=Msa0081070-mRNA-1:cds;Parent=Msa0081070-mRNA-1 |
| chr1_2 | three_prime_UTR | 59602638 | 59602683 | 59602638 | ID=Msa0081070-mRNA-1:three_prime_utr;Parent=Msa0081070-mRNA-1 |
| chr1_2 | three_prime_UTR | 59602789 | 59602978 | 59602789 | ID=Msa0081070-mRNA-1:three_prime_utr;Parent=Msa0081070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
