Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0036850 | sp|C6TEX6|FEN1_SOYBN | 86.364 | 374 | 36 | 2 | 1 | 366 | 1 | 367 | 0.0 | 662 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003700 | Msa0036850 | 0.805462 | 1.319432e-49 | -8.615850e-47 |
Msa0016670 | Msa0036850 | 0.838840 | 2.264236e-57 | -8.615850e-47 |
Msa0032430 | Msa0036850 | 0.805536 | 1.273301e-49 | -8.615850e-47 |
Msa0034270 | Msa0036850 | 0.826716 | 2.328465e-54 | -8.615850e-47 |
Msa0036850 | Msa0044020 | 0.814737 | 1.322799e-51 | -8.615850e-47 |
Msa0036850 | Msa0047070 | 0.810473 | 1.132846e-50 | -8.615850e-47 |
Msa0036850 | Msa0076040 | 0.804581 | 2.016348e-49 | -8.615850e-47 |
Msa0036850 | Msa0076310 | 0.828819 | 7.272887e-55 | -8.615850e-47 |
Msa0036850 | Msa0081070 | 0.800423 | 1.451256e-48 | -8.615850e-47 |
Msa0036850 | Msa0081520 | 0.805657 | 1.200707e-49 | -8.615850e-47 |
Msa0036850 | Msa0087940 | 0.811588 | 6.495971e-51 | -8.615850e-47 |
Msa0036850 | Msa0090590 | 0.835202 | 1.925053e-56 | -8.615850e-47 |
Msa0036850 | Msa0092790 | 0.825847 | 3.749964e-54 | -8.615850e-47 |
Msa0036850 | Msa0094120 | 0.814988 | 1.163729e-51 | -8.615850e-47 |
Msa0036850 | Msa0110970 | 0.837708 | 4.431192e-57 | -8.615850e-47 |
Msa0036850 | Msa0115160 | 0.826072 | 3.315351e-54 | -8.615850e-47 |
Msa0036850 | Msa0118570 | 0.810666 | 1.028998e-50 | -8.615850e-47 |
Msa0036850 | Msa0124060 | 0.805496 | 1.298180e-49 | -8.615850e-47 |
Msa0036850 | Msa0134180 | 0.820427 | 6.899370e-53 | -8.615850e-47 |
Msa0036850 | Msa0136650 | 0.804831 | 1.788354e-49 | -8.615850e-47 |
Msa0036850 | Msa0146260 | 0.817236 | 3.662052e-52 | -8.615850e-47 |
Msa0036850 | Msa0168500 | 0.805279 | 1.441247e-49 | -8.615850e-47 |
Msa0036850 | Msa0172070 | 0.805064 | 1.598586e-49 | -8.615850e-47 |
Msa0036850 | Msa0173660 | 0.814087 | 1.841874e-51 | -8.615850e-47 |
Msa0036850 | Msa0181610 | 0.803935 | 2.748536e-49 | -8.615850e-47 |
Msa0036850 | Msa0183830 | 0.842130 | 3.119806e-58 | -8.615850e-47 |
Msa0036850 | Msa0186890 | 0.808228 | 3.432629e-50 | -8.615850e-47 |
Msa0036850 | Msa0187690 | 0.802181 | 6.336197e-49 | -8.615850e-47 |
Msa0036850 | Msa0187930 | 0.818896 | 1.543150e-52 | -8.615850e-47 |
Msa0036850 | Msa0194540 | 0.824431 | 8.101511e-54 | -8.615850e-47 |
Msa0036850 | Msa0203030 | 0.802172 | 6.363261e-49 | -8.615850e-47 |
Msa0036850 | Msa0205840 | 0.819805 | 9.574887e-53 | -8.615850e-47 |
Msa0036850 | Msa0213280 | 0.814050 | 1.877013e-51 | -8.615850e-47 |
Msa0036850 | Msa0225740 | 0.815778 | 7.766291e-52 | -8.615850e-47 |
Msa0036850 | Msa0232690 | 0.808287 | 3.336133e-50 | -8.615850e-47 |
Msa0036850 | Msa0239190 | 0.814918 | 1.206425e-51 | -8.615850e-47 |
Msa0036850 | Msa0239520 | 0.801793 | 7.613381e-49 | -8.615850e-47 |
Msa0036850 | Msa0239570 | 0.827588 | 1.439631e-54 | -8.615850e-47 |
Msa0036850 | Msa0244780 | 0.828985 | 6.629661e-55 | -8.615850e-47 |
Msa0036850 | Msa0248970 | 0.831464 | 1.645204e-55 | -8.615850e-47 |
Msa0036850 | Msa0253700 | 0.819555 | 1.092459e-52 | -8.615850e-47 |
Msa0036850 | Msa0255090 | 0.811958 | 5.396443e-51 | -8.615850e-47 |
Msa0036850 | Msa0258330 | 0.804467 | 2.130178e-49 | -8.615850e-47 |
Msa0036850 | Msa0259380 | 0.811342 | 7.344992e-51 | -8.615850e-47 |
Msa0036850 | Msa0264870 | 0.816493 | 5.375719e-52 | -8.615850e-47 |
Msa0036850 | Msa0268130 | 0.826820 | 2.199407e-54 | -8.615850e-47 |
Msa0036850 | Msa0277180 | 0.820447 | 6.825337e-53 | -8.615850e-47 |
Msa0036850 | Msa0282790 | 0.806971 | 6.347685e-50 | -8.615850e-47 |
Msa0036850 | Msa0287300 | 0.806403 | 8.367048e-50 | -8.615850e-47 |
Msa0036850 | Msa0292400 | 0.833793 | 4.349238e-56 | -8.615850e-47 |
Msa0036850 | Msa0294160 | 0.801346 | 9.402222e-49 | -8.615850e-47 |
Msa0036850 | Msa0298990 | 0.833236 | 5.988582e-56 | -8.615850e-47 |
Msa0036850 | Msa0306300 | 0.811491 | 6.818238e-51 | -8.615850e-47 |
Msa0036850 | Msa0316810 | 0.808515 | 2.982363e-50 | -8.615850e-47 |
Msa0036850 | Msa0317280 | 0.817971 | 2.499491e-52 | -8.615850e-47 |
Msa0036850 | Msa0318700 | 0.806844 | 6.753267e-50 | -8.615850e-47 |
Msa0036850 | Msa0341330 | 0.849524 | 3.059916e-60 | -8.615850e-47 |
Msa0036850 | Msa0386850 | 0.810502 | 1.116687e-50 | -8.615850e-47 |
Msa0036850 | Msa0402650 | 0.803987 | 2.681120e-49 | -8.615850e-47 |
Msa0036850 | Msa0417880 | 0.840503 | 8.359658e-58 | -8.615850e-47 |
Msa0036850 | Msa0428150 | 0.816746 | 4.718071e-52 | -8.615850e-47 |
Msa0036850 | Msa0430260 | 0.818625 | 1.777885e-52 | -8.615850e-47 |
Msa0036850 | Msa0434920 | 0.816187 | 6.294492e-52 | -8.615850e-47 |
Msa0036850 | Msa0462500 | 0.825665 | 4.140530e-54 | -8.615850e-47 |
Msa0036850 | Msa0467300 | 0.824535 | 7.657849e-54 | -8.615850e-47 |
Msa0036850 | Msa0475790 | 0.815664 | 8.234667e-52 | -8.615850e-47 |
Msa0036850 | Msa0500380 | 0.812217 | 4.738456e-51 | -8.615850e-47 |
Msa0036850 | Msa0509830 | 0.807304 | 5.395058e-50 | -8.615850e-47 |
Msa0036850 | Msa0509850 | 0.805727 | 1.161123e-49 | -8.615850e-47 |
Msa0036850 | Msa0526540 | 0.802627 | 5.128619e-49 | -8.615850e-47 |
Msa0036850 | Msa0527860 | 0.828509 | 8.642867e-55 | -8.615850e-47 |
Msa0036850 | Msa0532070 | 0.827439 | 1.563787e-54 | -8.615850e-47 |
Msa0036850 | Msa0541860 | 0.812957 | 3.263864e-51 | -8.615850e-47 |
Msa0036850 | Msa0546680 | 0.819412 | 1.177192e-52 | -8.615850e-47 |
Msa0036850 | Msa0569200 | 0.829683 | 4.487176e-55 | -8.615850e-47 |
Msa0036850 | Msa0571920 | 0.839094 | 1.946024e-57 | -8.615850e-47 |
Msa0036850 | Msa0576690 | 0.817785 | 2.754202e-52 | -8.615850e-47 |
Msa0036850 | Msa0576940 | 0.815881 | 7.367152e-52 | -8.615850e-47 |
Msa0036850 | Msa0582450 | 0.840217 | 9.931278e-58 | -8.615850e-47 |
Msa0036850 | Msa0586190 | 0.842465 | 2.544186e-58 | -8.615850e-47 |
Msa0036850 | Msa0616220 | 0.810696 | 1.013862e-50 | -8.615850e-47 |
Msa0036850 | Msa0620240 | 0.801604 | 8.325231e-49 | -8.615850e-47 |
Msa0036850 | Msa0620990 | 0.925947 | 9.181297e-91 | -8.615850e-47 |
Msa0036850 | Msa0625630 | 0.817927 | 2.557918e-52 | -8.615850e-47 |
Msa0036850 | Msa0626450 | 0.814239 | 1.704444e-51 | -8.615850e-47 |
Msa0036850 | Msa0626490 | 0.816707 | 4.814149e-52 | -8.615850e-47 |
Msa0036850 | Msa0639430 | 0.819624 | 1.053528e-52 | -8.615850e-47 |
Msa0036850 | Msa0643300 | 0.800958 | 1.128824e-48 | -8.615850e-47 |
Msa0036850 | Msa0649940 | 0.823701 | 1.202029e-53 | -8.615850e-47 |
Msa0036850 | Msa0650020 | 0.843466 | 1.376877e-58 | -8.615850e-47 |
Msa0036850 | Msa0663300 | 0.828502 | 8.676553e-55 | -8.615850e-47 |
Msa0036850 | Msa0664060 | 0.824130 | 9.535256e-54 | -8.615850e-47 |
Msa0036850 | Msa0664600 | 0.813057 | 3.103623e-51 | -8.615850e-47 |
Msa0036850 | Msa0677290 | 0.801273 | 9.732065e-49 | -8.615850e-47 |
Msa0036850 | Msa0677410 | 0.815375 | 9.545418e-52 | -8.615850e-47 |
Msa0036850 | Msa0682330 | 0.815997 | 6.938362e-52 | -8.615850e-47 |
Msa0036850 | Msa0683570 | 0.834363 | 3.129363e-56 | -8.615850e-47 |
Msa0036850 | Msa0691980 | 0.866280 | 3.199881e-65 | -8.615850e-47 |
Msa0036850 | Msa0703230 | 0.808455 | 3.071502e-50 | -8.615850e-47 |
Msa0036850 | Msa0704600 | 0.804756 | 1.854545e-49 | -8.615850e-47 |
Msa0036850 | Msa0718550 | 0.825485 | 4.568111e-54 | -8.615850e-47 |
Msa0036850 | Msa0749740 | 0.810526 | 1.103040e-50 | -8.615850e-47 |
Msa0036850 | Msa0749760 | 0.802084 | 6.634376e-49 | -8.615850e-47 |
Msa0036850 | Msa0750090 | 0.804986 | 1.659872e-49 | -8.615850e-47 |
Msa0036850 | Msa0754520 | 0.813338 | 2.692563e-51 | -8.615850e-47 |
Msa0036850 | Msa0829800 | 0.809134 | 2.198361e-50 | -8.615850e-47 |
Msa0036850 | Msa0833220 | 0.811808 | 5.818201e-51 | -8.615850e-47 |
Msa0036850 | Msa0856050 | 0.809435 | 1.894578e-50 | -8.615850e-47 |
Msa0036850 | Msa0880680 | 0.800005 | 1.765503e-48 | -8.615850e-47 |
Msa0036850 | Msa0909230 | 0.804743 | 1.865923e-49 | -8.615850e-47 |
Msa0036850 | Msa0961690 | 0.803144 | 4.011432e-49 | -8.615850e-47 |
Msa0036850 | Msa1007270 | 0.804582 | 2.016237e-49 | -8.615850e-47 |
Msa0036850 | Msa1018690 | 0.807384 | 5.190427e-50 | -8.615850e-47 |
Msa0036850 | Msa1020670 | 0.810407 | 1.170781e-50 | -8.615850e-47 |
Msa0036850 | Msa1043690 | 0.806865 | 6.683252e-50 | -8.615850e-47 |
Msa0036850 | Msa1045140 | 0.815726 | 7.974042e-52 | -8.615850e-47 |
Msa0036850 | Msa1048920 | 0.808497 | 3.008456e-50 | -8.615850e-47 |
Msa0036850 | Msa1051830 | 0.810090 | 1.370183e-50 | -8.615850e-47 |
Msa0036850 | Msa1066490 | 0.840390 | 8.949107e-58 | -8.615850e-47 |
Msa0036850 | Msa1097640 | 0.840613 | 7.824746e-58 | -8.615850e-47 |
Msa0036850 | Msa1111130 | 0.801308 | 9.571410e-49 | -8.615850e-47 |
Msa0036850 | Msa1113340 | 0.829291 | 5.587125e-55 | -8.615850e-47 |
Msa0036850 | Msa1124110 | 0.806309 | 8.758942e-50 | -8.615850e-47 |
Msa0036850 | Msa1126510 | 0.806405 | 8.359296e-50 | -8.615850e-47 |
Msa0036850 | Msa1127890 | 0.806104 | 9.671340e-50 | -8.615850e-47 |
Msa0036850 | Msa1133000 | 0.801530 | 8.622119e-49 | -8.615850e-47 |
Msa0036850 | Msa1139810 | 0.827470 | 1.537114e-54 | -8.615850e-47 |
Msa0036850 | Msa1143650 | 0.801279 | 9.703223e-49 | -8.615850e-47 |
Msa0036850 | Msa1168950 | 0.804226 | 2.391832e-49 | -8.615850e-47 |
Msa0036850 | Msa1181860 | 0.801880 | 7.306887e-49 | -8.615850e-47 |
Msa0036850 | Msa1196100 | 0.836993 | 6.754936e-57 | -8.615850e-47 |
Msa0036850 | Msa1200370 | 0.819317 | 1.237775e-52 | -8.615850e-47 |
Msa0036850 | Msa1201650 | 0.809852 | 1.541460e-50 | -8.615850e-47 |
Msa0036850 | Msa1209460 | 0.815297 | 9.938623e-52 | -8.615850e-47 |
Msa0036850 | Msa1232710 | 0.833181 | 6.181369e-56 | -8.615850e-47 |
Msa0036850 | Msa1236100 | 0.810344 | 1.207868e-50 | -8.615850e-47 |
Msa0036850 | Msa1252190 | 0.845519 | 3.859967e-59 | -8.615850e-47 |
Msa0036850 | Msa1253310 | 0.812350 | 4.431186e-51 | -8.615850e-47 |
Msa0036850 | Msa1258710 | 0.822335 | 2.502763e-53 | -8.615850e-47 |
Msa0036850 | Msa1274060 | 0.818410 | 1.989444e-52 | -8.615850e-47 |
Msa0036850 | Msa1292830 | 0.849227 | 3.702591e-60 | -8.615850e-47 |
Msa0036850 | Msa1307570 | 0.806598 | 7.610098e-50 | -8.615850e-47 |
Msa0036850 | Msa1309790 | 0.805493 | 1.299962e-49 | -8.615850e-47 |
Msa0036850 | Msa1313300 | 0.835099 | 2.043334e-56 | -8.615850e-47 |
Msa0036850 | Msa1363330 | 0.804135 | 2.498433e-49 | -8.615850e-47 |
Msa0036850 | Msa1366600 | 0.815764 | 7.822816e-52 | -8.615850e-47 |
Msa0036850 | Msa1369150 | 0.806772 | 6.993354e-50 | -8.615850e-47 |
Msa0036850 | Msa1370010 | 0.852334 | 4.941032e-61 | -8.615850e-47 |
Msa0036850 | Msa1374040 | 0.819588 | 1.073163e-52 | -8.615850e-47 |
Msa0036850 | Msa1374120 | 0.824232 | 9.023186e-54 | -8.615850e-47 |
Msa0036850 | Msa1382620 | 0.813290 | 2.758890e-51 | -8.615850e-47 |
Msa0036850 | Msa1386600 | 0.802879 | 4.549910e-49 | -8.615850e-47 |
Msa0036850 | Msa1406040 | 0.802576 | 5.253741e-49 | -8.615850e-47 |
Msa0036850 | Msa1418090 | 0.818958 | 1.493913e-52 | -8.615850e-47 |
Msa0036850 | Msa1432950 | 0.998681 | 8.594344e-273 | -8.615850e-47 |
Msa0036850 | Msa1440960 | 0.811186 | 7.938703e-51 | -8.615850e-47 |
Msa0036850 | Msa1448690 | 0.841693 | 4.071534e-58 | -8.615850e-47 |
Msa0036850 | Msa1453740 | 0.840560 | 8.081122e-58 | -8.615850e-47 |
Msa0036850 | Msa1459380 | 0.953584 | 1.988027e-111 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0036850 | MtrunA17_Chr1g0193411 | 95.652 | 391 | 2 | 2 | 1 | 383 | 1 | 384 | 0.0 | 754 |
Msa0036850 | MtrunA17_Chr8g0380081 | 25.606 | 289 | 190 | 7 | 1 | 281 | 1 | 272 | 3.31e-15 | 75.9 |
Msa0036850 | MtrunA17_Chr7g0246801 | 30.282 | 284 | 160 | 16 | 1 | 273 | 1 | 257 | 2.94e-14 | 74.3 |
Msa0036850 | MtrunA17_Chr6g0482931 | 24.784 | 347 | 239 | 10 | 1 | 334 | 1 | 338 | 6.04e-14 | 73.2 |
Msa0036850 | MtrunA17_Chr7g0228021 | 30.508 | 118 | 72 | 2 | 133 | 250 | 1031 | 1138 | 9.86e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0036850 | AT5G26680.2 | 81.074 | 391 | 58 | 3 | 1 | 383 | 1 | 383 | 0.0 | 646 |
Msa0036850 | AT5G26680.5 | 82.880 | 368 | 48 | 2 | 1 | 360 | 1 | 361 | 0.0 | 628 |
Msa0036850 | AT5G26680.4 | 82.880 | 368 | 48 | 2 | 1 | 360 | 1 | 361 | 0.0 | 628 |
Msa0036850 | AT5G26680.3 | 82.880 | 368 | 48 | 2 | 1 | 360 | 1 | 361 | 0.0 | 628 |
Msa0036850 | AT5G26680.1 | 83.060 | 366 | 47 | 2 | 1 | 358 | 1 | 359 | 0.0 | 623 |
Msa0036850 | AT1G29630.2 | 28.214 | 280 | 176 | 7 | 1 | 271 | 1 | 264 | 1.01e-17 | 85.5 |
Msa0036850 | AT3G28030.4 | 31.579 | 133 | 81 | 3 | 118 | 250 | 721 | 843 | 2.82e-13 | 72.0 |
Msa0036850 | AT3G28030.2 | 31.579 | 133 | 81 | 3 | 118 | 250 | 913 | 1035 | 3.24e-13 | 72.0 |
Msa0036850 | AT3G28030.1 | 31.579 | 133 | 81 | 3 | 118 | 250 | 913 | 1035 | 3.66e-13 | 71.6 |
Msa0036850 | AT3G28030.3 | 31.579 | 133 | 81 | 3 | 118 | 250 | 939 | 1061 | 3.67e-13 | 71.6 |
Msa0036850 | AT1G01880.2 | 28.629 | 248 | 153 | 10 | 19 | 263 | 16 | 242 | 8.01e-13 | 70.5 |
Find 101 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGACTTATGTATACTTTC+TGG | 0.201124 | 1_1:+65691892 | Msa0036850:CDS |
TTTGTTCTCCTTCATTGATT+TGG | 0.219066 | 1_1:-65689077 | None:intergenic |
ATTAGATGGCGAAGAAATTT+AGG | 0.232530 | 1_1:-65691703 | None:intergenic |
TTGTTCTCCTTCATTGATTT+GGG | 0.261805 | 1_1:-65689076 | None:intergenic |
GCAACGTCAAATTCCATTAC+TGG | 0.277285 | 1_1:-65691748 | None:intergenic |
TAATTTAAGTTAGATAATTC+TGG | 0.292059 | 1_1:+65695027 | Msa0036850:three_prime_UTR |
CAATGTGTGCCACAGGTATT+GGG | 0.301115 | 1_1:+65692044 | Msa0036850:intron |
ACCAGATGATTGGCCGTATC+AGG | 0.302586 | 1_1:+65692398 | Msa0036850:CDS |
TAAATTTCTTCGCCATCTAA+TGG | 0.313159 | 1_1:+65691705 | Msa0036850:CDS |
AGTTGGATTTGTATCTTAGA+TGG | 0.321968 | 1_1:+65694794 | Msa0036850:exon |
ATAGTTATTACTTCTTCATC+TGG | 0.327089 | 1_1:-65692492 | None:intergenic |
TCAAACAACGATGGGTATTA+AGG | 0.329268 | 1_1:+65688908 | Msa0036850:exon |
CCGTACGAAAACACCTTTAC+AGG | 0.342794 | 1_1:+65688795 | None:intergenic |
TTGAACTAGGATCCATTAGA+TGG | 0.369663 | 1_1:-65691717 | None:intergenic |
GTACATACCTTCCGTTTGAT+AGG | 0.370776 | 1_1:-65692964 | None:intergenic |
AGAATGGGTTCAACAGTGAT+AGG | 0.372124 | 1_1:+65692667 | Msa0036850:CDS |
TGTGCTGCACTTTGCAAAGC+TGG | 0.379737 | 1_1:+65690511 | Msa0036850:CDS |
GACATGGATTCCTTAACGTT+TGG | 0.380008 | 1_1:+65691676 | Msa0036850:CDS |
CAAGTTAAATTAACTCGAAA+AGG | 0.387802 | 1_1:-65695102 | None:intergenic |
TGAAACCACTTACAAGAAAC+TGG | 0.396979 | 1_1:-65689153 | None:intergenic |
AGCTCTTGATTCTTCATCTC+CGG | 0.402266 | 1_1:-65689893 | None:intergenic |
TCCTGATACGGCCAATCATC+TGG | 0.411236 | 1_1:-65692399 | None:intergenic |
AACAAATTCGAATCTTACTT+TGG | 0.413135 | 1_1:+65689094 | Msa0036850:CDS |
TGACGGCAGAAAGATGAATA+AGG | 0.423648 | 1_1:-65688850 | None:intergenic |
TTTAGGAGCTCCAAACGTTA+AGG | 0.426815 | 1_1:-65691686 | None:intergenic |
GTATACATAAGTCAATAAAT+TGG | 0.431271 | 1_1:-65691885 | None:intergenic |
ACATTTCTAGTAAATGAGAA+TGG | 0.445257 | 1_1:+65692651 | Msa0036850:CDS |
GTGAATGATGCTAAAGCTAA+AGG | 0.452022 | 1_1:+65694727 | Msa0036850:CDS |
TGCAACGTCACCTCAACAAC+AGG | 0.456473 | 1_1:-65690398 | None:intergenic |
ATGAAGTACTTAATCTTAAG+TGG | 0.475016 | 1_1:+65692463 | Msa0036850:CDS |
CGAGGCTACCGCGGGTTTGA+CGG | 0.478333 | 1_1:+65690039 | Msa0036850:CDS |
TTCAAAGAAGATTCCAGTAA+TGG | 0.481227 | 1_1:+65691735 | Msa0036850:CDS |
TTGCAGAGGATAATGTGAAC+TGG | 0.481897 | 1_1:-65688877 | None:intergenic |
ACATTGAGCCTCTGCTTCTG+AGG | 0.483766 | 1_1:-65690491 | None:intergenic |
TCATCATCAGTTATGACCTC+TGG | 0.494511 | 1_1:-65692444 | None:intergenic |
TTAGCTTTAGCATCATTCAC+TGG | 0.498319 | 1_1:-65694724 | None:intergenic |
ACTGGAATCTTCTTTGAACT+AGG | 0.498453 | 1_1:-65691730 | None:intergenic |
ATCCATCAGTACCTATCAAA+CGG | 0.498859 | 1_1:+65692953 | Msa0036850:CDS |
TGAATGATGCTAAAGCTAAA+GGG | 0.506104 | 1_1:+65694728 | Msa0036850:CDS |
GTTGGATTTGTATCTTAGAT+GGG | 0.507708 | 1_1:+65694795 | Msa0036850:exon |
TGCACTTTGCAAAGCTGGAA+AGG | 0.511154 | 1_1:+65690516 | Msa0036850:CDS |
TAGATTGTTGTGGGAAGAAG+TGG | 0.512021 | 1_1:+65689248 | Msa0036850:intron |
GGTACTGATGGATTTGCAGT+TGG | 0.513657 | 1_1:-65692943 | None:intergenic |
TTCCGTTTGATAGGTACTGA+TGG | 0.513936 | 1_1:-65692955 | None:intergenic |
CATTTCTAGTAAATGAGAAT+GGG | 0.515548 | 1_1:+65692652 | Msa0036850:CDS |
GGTACCAGGTACCAGATGAT+TGG | 0.518316 | 1_1:+65692388 | Msa0036850:intron |
CAATCAGACTTCTAGAAGCC+GGG | 0.522415 | 1_1:+65689729 | Msa0036850:CDS |
TAGCATCAACAGCAATCTTA+CGG | 0.527772 | 1_1:-65689117 | None:intergenic |
ACAATCAGACTTCTAGAAGC+CGG | 0.528458 | 1_1:+65689728 | Msa0036850:CDS |
CATGGGAGTGCCTGTTGTTG+AGG | 0.530578 | 1_1:+65690388 | Msa0036850:CDS |
AGTCGTCGAGCCTCCTGATA+CGG | 0.531492 | 1_1:-65692411 | None:intergenic |
CATTGAGCCTCTGCTTCTGA+GGG | 0.532841 | 1_1:-65690490 | None:intergenic |
AAGTTAAATTAACTCGAAAA+GGG | 0.536894 | 1_1:-65695101 | None:intergenic |
CGTCAAACCCGCGGTAGCCT+CGG | 0.539383 | 1_1:-65690038 | None:intergenic |
AGGGAGTAACAAGAAAACTA+AGG | 0.546996 | 1_1:+65694747 | Msa0036850:CDS |
TCCCGCGCACTCTCCTGTAA+AGG | 0.554282 | 1_1:-65688808 | None:intergenic |
GAATTACACTGGCTTCATCC+CGG | 0.555023 | 1_1:-65689747 | None:intergenic |
GTCATTTCAGGCTGACAACA+AGG | 0.555566 | 1_1:+65690168 | Msa0036850:intron |
GTTATTACTTCTTCATCTGG+AGG | 0.556809 | 1_1:-65692489 | None:intergenic |
TGCTGTGGCTTCTGAAGACA+TGG | 0.557625 | 1_1:+65691660 | Msa0036850:CDS |
ATTCTCATTCAAACAACGAT+GGG | 0.565501 | 1_1:+65688900 | Msa0036850:exon |
TAATGCTCCCAAATCAATGA+AGG | 0.565914 | 1_1:+65689069 | Msa0036850:CDS |
GAGTCATTTACATGTTGACC+AGG | 0.570576 | 1_1:+65694820 | Msa0036850:three_prime_UTR |
CACCTTTACAGGAGAGTGCG+CGG | 0.572258 | 1_1:+65688806 | Msa0036850:five_prime_UTR |
AAAGAGAGCCGAGGCTACCG+CGG | 0.575078 | 1_1:+65690030 | Msa0036850:CDS |
TAAGTCAATAAATTGGTCCA+TGG | 0.575375 | 1_1:-65691878 | None:intergenic |
GATTACTGTGACAACATTCG+AGG | 0.577617 | 1_1:+65691919 | Msa0036850:CDS |
GAAATGTTGACTAATGAAGC+TGG | 0.580121 | 1_1:+65689275 | Msa0036850:CDS |
AATGGAATTTGACGTTGCAA+AGG | 0.585097 | 1_1:+65691753 | Msa0036850:CDS |
AAGAGAGCCGAGGCTACCGC+GGG | 0.585100 | 1_1:+65690031 | Msa0036850:CDS |
TTTGCAGTTGGCATGAAGGA+GGG | 0.585902 | 1_1:+65694942 | Msa0036850:intron |
AATTCTCATTCAAACAACGA+TGG | 0.591195 | 1_1:+65688899 | Msa0036850:exon |
ACGGCCAATCATCTGGTACC+TGG | 0.591435 | 1_1:-65692392 | None:intergenic |
AAGAAAACTAAGGCCGGTGG+CGG | 0.593257 | 1_1:+65694757 | Msa0036850:CDS |
AGAACAAGTCATCACAAGGC+CGG | 0.593889 | 1_1:+65692818 | Msa0036850:CDS |
TCTTGATTCTTCATCTCCGG+TGG | 0.593963 | 1_1:-65689890 | None:intergenic |
GGGTTTGACGGAAGCTCTAG+AGG | 0.596065 | 1_1:+65690051 | Msa0036850:CDS |
GAATGGGTTCAACAGTGATA+GGG | 0.599805 | 1_1:+65692668 | Msa0036850:CDS |
AATGTGTGCCACAGGTATTG+GGG | 0.602638 | 1_1:+65692045 | Msa0036850:intron |
ATCAGTACCTATCAAACGGA+AGG | 0.602952 | 1_1:+65692957 | Msa0036850:CDS |
CAACAGTGATAGGGTGACAA+AGG | 0.605881 | 1_1:+65692677 | Msa0036850:CDS |
GCAGGCACCCTCAGAAGCAG+AGG | 0.611684 | 1_1:+65690483 | Msa0036850:intron |
AGTAACAAGAAAACTAAGGC+CGG | 0.615091 | 1_1:+65694751 | Msa0036850:CDS |
ATGTGTGCCACAGGTATTGG+GGG | 0.618919 | 1_1:+65692046 | Msa0036850:intron |
TTACCACCGATTCAGGTACC+AGG | 0.619372 | 1_1:+65692374 | Msa0036850:intron |
ACCTTTACAGGAGAGTGCGC+GGG | 0.621575 | 1_1:+65688807 | Msa0036850:five_prime_UTR |
TATTATACAGGTGTATGCTG+TGG | 0.633214 | 1_1:+65691645 | Msa0036850:intron |
ATTCAGTAAACGGACAGTGA+AGG | 0.645257 | 1_1:+65690204 | Msa0036850:CDS |
GGAGGAGCTAGATTTGACCA+TGG | 0.645396 | 1_1:+65691861 | Msa0036850:CDS |
AGATGATTGGCCGTATCAGG+AGG | 0.645693 | 1_1:+65692401 | Msa0036850:CDS |
GCAAAGAACAAGTCATCACA+AGG | 0.651244 | 1_1:+65692814 | Msa0036850:CDS |
TGGAAAACATAAGCAAAGAG+AGG | 0.655385 | 1_1:+65692119 | Msa0036850:CDS |
TAGAGCTTCCGTCAAACCCG+CGG | 0.656861 | 1_1:-65690047 | None:intergenic |
CAGTCTCTCAAAGAGAGCCG+AGG | 0.661691 | 1_1:+65690021 | Msa0036850:intron |
CTGAAGCTCATACGCCAACA+CGG | 0.665576 | 1_1:+65692079 | Msa0036850:CDS |
ATTTGCAAGGAATGTTTGCG+CGG | 0.671541 | 1_1:+65689705 | Msa0036850:intron |
TTGTGATACAATGCTTCATG+TGG | 0.680961 | 1_1:+65695060 | Msa0036850:three_prime_UTR |
AACAAGAAAACTAAGGCCGG+TGG | 0.687823 | 1_1:+65694754 | Msa0036850:CDS |
GTTTGAATGAGAATTTGCAG+AGG | 0.689167 | 1_1:-65688891 | None:intergenic |
TAATGTGAACTGGAGTGTGA+CGG | 0.699602 | 1_1:-65688867 | None:intergenic |
TGTGTGCCACAGGTATTGGG+GGG | 0.726679 | 1_1:+65692047 | Msa0036850:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATATTTAATAAAATAA+AGG | - | chr1_1:65693522-65693541 | None:intergenic | 0.0% |
!!! | TTTTATTAAATATTAATAAT+AGG | + | chr1_1:65693525-65693544 | Msa0036850:intron | 0.0% |
!! | TTTATTAAATATTAATAATA+GGG | + | chr1_1:65693526-65693545 | Msa0036850:intron | 0.0% |
!!! | TTTAATGTTGATTAATTTTT+AGG | + | chr1_1:65689024-65689043 | Msa0036850:intron | 10.0% |
!!! | TTAATGTTGATTAATTTTTA+GGG | + | chr1_1:65689025-65689044 | Msa0036850:intron | 10.0% |
!!! | AAACATTTTATATATTATAC+AGG | + | chr1_1:65691633-65691652 | Msa0036850:intron | 10.0% |
!!! | TTTTGTTTAATTTTTCTGTA+AGG | + | chr1_1:65689632-65689651 | Msa0036850:intron | 15.0% |
!!! | TTTGTTTAATTTTTCTGTAA+GGG | + | chr1_1:65689633-65689652 | Msa0036850:intron | 15.0% |
!! | ATATTGAAAAATTCAGTAAA+CGG | + | chr1_1:65690194-65690213 | Msa0036850:CDS | 15.0% |
!!! | TTATTTATTTTTCATTTCCA+TGG | - | chr1_1:65690622-65690641 | None:intergenic | 15.0% |
!!! | TATTAATTTTAGTTAACATG+TGG | + | chr1_1:65691019-65691038 | Msa0036850:intron | 15.0% |
!!! | ATTAATTTTAGTTAACATGT+GGG | + | chr1_1:65691020-65691039 | Msa0036850:intron | 15.0% |
!! | TCACTTTGAATAAAAATTAT+AGG | + | chr1_1:65691370-65691389 | Msa0036850:intron | 15.0% |
!!! | GTAATGTAACATTTAATTTT+GGG | - | chr1_1:65691473-65691492 | None:intergenic | 15.0% |
!! | TTAAATAGTTTCATAAATAG+TGG | - | chr1_1:65691495-65691514 | None:intergenic | 15.0% |
!! | TCAAATGCAAAAAATATTAA+AGG | - | chr1_1:65691535-65691554 | None:intergenic | 15.0% |
!! | AAAACAAAGAATTTCAAAAT+GGG | - | chr1_1:65692158-65692177 | None:intergenic | 15.0% |
!! | AAATTAATAAAATTTGACTG+TGG | - | chr1_1:65692330-65692349 | None:intergenic | 15.0% |
!!! | ATATCTATGTATCAATTTTT+TGG | + | chr1_1:65692584-65692603 | Msa0036850:intron | 15.0% |
!!! | ATGATTTTTTTTTCAATGTT+AGG | + | chr1_1:65692771-65692790 | Msa0036850:intron | 15.0% |
!! | AATAAATTATAATCACTTAC+CGG | - | chr1_1:65692840-65692859 | None:intergenic | 15.0% |
!!! | CTTAATTTTTTTGGTAAATT+TGG | - | chr1_1:65693609-65693628 | None:intergenic | 15.0% |
!!! | AAATATCAGCTTAATTTTTT+TGG | - | chr1_1:65693618-65693637 | None:intergenic | 15.0% |
!! | TTAATAAAGTAGAAATGAAA+AGG | - | chr1_1:65694263-65694282 | None:intergenic | 15.0% |
!!! | ATTACAGAAAATTGTTATTA+TGG | + | chr1_1:65694320-65694339 | Msa0036850:intron | 15.0% |
!!! | TTATTATCAATTTGTTTTCA+TGG | - | chr1_1:65694430-65694449 | None:intergenic | 15.0% |
!!! | TTTTCAATTATCTTTAACAT+TGG | - | chr1_1:65694619-65694638 | None:intergenic | 15.0% |
!!! | TAATTTAAGTTAGATAATTC+TGG | + | chr1_1:65695027-65695046 | Msa0036850:three_prime_UTR | 15.0% |
!! | TTTCAATTTCAACCTAAAAT+GGG | + | chr1_1:65689171-65689190 | Msa0036850:intron | 20.0% |
!! | AAAAAAAAGAAGAATTACAC+TGG | - | chr1_1:65689761-65689780 | None:intergenic | 20.0% |
!! | TAGAAGAAAATGCATTAATT+AGG | - | chr1_1:65689991-65690010 | None:intergenic | 20.0% |
!!! | TATTATAATGGATTGAAACA+AGG | + | chr1_1:65690279-65690298 | Msa0036850:intron | 20.0% |
!! | AGTATAGAATATATTCTCAA+CGG | - | chr1_1:65690317-65690336 | None:intergenic | 20.0% |
!! | AATATATTCTATACTCTTGT+AGG | + | chr1_1:65690322-65690341 | Msa0036850:intron | 20.0% |
!!! | TATCATTTTAGTTTTCAAGA+AGG | - | chr1_1:65690566-65690585 | None:intergenic | 20.0% |
!!! | TATCATTTTAGTTTTCAAGA+AGG | - | chr1_1:65690566-65690585 | None:intergenic | 20.0% |
!! | GTGTTTAATTAAAAACTAGA+GGG | - | chr1_1:65690852-65690871 | None:intergenic | 20.0% |
!! | AGTGTTTAATTAAAAACTAG+AGG | - | chr1_1:65690853-65690872 | None:intergenic | 20.0% |
!!! | TCGCTTTGAATAAAAATTAA+GGG | - | chr1_1:65690881-65690900 | None:intergenic | 20.0% |
!!! | GGTAATGTAACATTTAATTT+TGG | - | chr1_1:65691474-65691493 | None:intergenic | 20.0% |
!!! | CTTGTATTAATTTGATATGA+AGG | - | chr1_1:65691578-65691597 | None:intergenic | 20.0% |
!! | GTATACATAAGTCAATAAAT+TGG | - | chr1_1:65691888-65691907 | None:intergenic | 20.0% |
!! | GAAAACAAAGAATTTCAAAA+TGG | - | chr1_1:65692159-65692178 | None:intergenic | 20.0% |
!!! | AACTTAAAGTATTCTTTCAA+AGG | + | chr1_1:65692525-65692544 | Msa0036850:intron | 20.0% |
!!! | ACTTAAAGTATTCTTTCAAA+GGG | + | chr1_1:65692526-65692545 | Msa0036850:intron | 20.0% |
!! | TACATAGATATAACAAACAT+AGG | - | chr1_1:65692575-65692594 | None:intergenic | 20.0% |
!!! | TTTAGTTTTTCTTCTTCTTT+TGG | + | chr1_1:65693102-65693121 | Msa0036850:intron | 20.0% |
!!! | TTAGTTTTTCTTCTTCTTTT+GGG | + | chr1_1:65693103-65693122 | Msa0036850:intron | 20.0% |
!! | AATAATGTATATCCATATCT+CGG | - | chr1_1:65693309-65693328 | None:intergenic | 20.0% |
!! | ATTATTCATGCATTTGATAT+GGG | + | chr1_1:65693323-65693342 | Msa0036850:intron | 20.0% |
!!! | ATATGGGGTATTTTTTTTAT+TGG | + | chr1_1:65693339-65693358 | Msa0036850:intron | 20.0% |
!! | ATAAAATAAAGGAACACAAA+GGG | - | chr1_1:65693511-65693530 | None:intergenic | 20.0% |
!! | AATAAAATAAAGGAACACAA+AGG | - | chr1_1:65693512-65693531 | None:intergenic | 20.0% |
!!! | ATGTAGTTTTAAAATTTCTC+AGG | - | chr1_1:65693937-65693956 | None:intergenic | 20.0% |
!!! | AGAAATTTTAAAACTACATC+AGG | + | chr1_1:65693938-65693957 | Msa0036850:intron | 20.0% |
!!! | AGAAAATTGTTATTATGGTT+TGG | + | chr1_1:65694325-65694344 | Msa0036850:intron | 20.0% |
!!! | CACACAAATATTTTACAATT+TGG | - | chr1_1:65694996-65695015 | None:intergenic | 20.0% |
!! | AAGTTAAATTAACTCGAAAA+GGG | - | chr1_1:65695104-65695123 | None:intergenic | 20.0% |
! | GAAATTGAGAGAAAAATAGA+GGG | - | chr1_1:65688948-65688967 | None:intergenic | 25.0% |
! | AGAAATTGAGAGAAAAATAG+AGG | - | chr1_1:65688949-65688968 | None:intergenic | 25.0% |
! | AACAAATTCGAATCTTACTT+TGG | + | chr1_1:65689094-65689113 | Msa0036850:CDS | 25.0% |
! | GTTTCAATTTCAACCTAAAA+TGG | + | chr1_1:65689170-65689189 | Msa0036850:intron | 25.0% |
!! | AACAAAAGTTAACCCATTTT+AGG | - | chr1_1:65689186-65689205 | None:intergenic | 25.0% |
!!! | ATTTTGATGTAGATTGTTGT+GGG | + | chr1_1:65689239-65689258 | Msa0036850:intron | 25.0% |
! | GTAGTAATTAAATCTCTTAG+TGG | + | chr1_1:65689314-65689333 | Msa0036850:intron | 25.0% |
! | ATAAACTGATTATCCAAACA+GGG | - | chr1_1:65689363-65689382 | None:intergenic | 25.0% |
! | AATAAACTGATTATCCAAAC+AGG | - | chr1_1:65689364-65689383 | None:intergenic | 25.0% |
! | AAACAACTGAACACAATTAA+GGG | - | chr1_1:65689614-65689633 | None:intergenic | 25.0% |
! | AAAACAACTGAACACAATTA+AGG | - | chr1_1:65689615-65689634 | None:intergenic | 25.0% |
!! | GAATTTTATAGTCATTTGCA+AGG | + | chr1_1:65689692-65689711 | Msa0036850:intron | 25.0% |
!!! | TATCCAGATATGTTTTTGAT+GGG | + | chr1_1:65689864-65689883 | Msa0036850:intron | 25.0% |
! | GAGATATCTTGTATTAAATC+AGG | + | chr1_1:65690118-65690137 | Msa0036850:intron | 25.0% |
!!! | AAAAGACTTTTAAGACTCAT+GGG | + | chr1_1:65690371-65690390 | Msa0036850:CDS | 25.0% |
! | GCTATTTAAGAAAACCTAAA+GGG | - | chr1_1:65690820-65690839 | None:intergenic | 25.0% |
!! | TGCTATTTAAGAAAACCTAA+AGG | - | chr1_1:65690821-65690840 | None:intergenic | 25.0% |
! | CTTTGAATAAAAATTAAGGG+AGG | - | chr1_1:65690878-65690897 | None:intergenic | 25.0% |
!! | GTCGCTTTGAATAAAAATTA+AGG | - | chr1_1:65690882-65690901 | None:intergenic | 25.0% |
! | AGTGTTTAGTTAAAAAGTAG+AGG | + | chr1_1:65691398-65691417 | Msa0036850:intron | 25.0% |
! | GTGTTTAGTTAAAAAGTAGA+GGG | + | chr1_1:65691399-65691418 | Msa0036850:intron | 25.0% |
! | TGTTTAGTTAAAAAGTAGAG+GGG | + | chr1_1:65691400-65691419 | Msa0036850:intron | 25.0% |
!! | ATATCTCATGTTTCAGATTT+TGG | + | chr1_1:65691840-65691859 | Msa0036850:intron | 25.0% |
!! | ATTGACTTATGTATACTTTC+TGG | + | chr1_1:65691892-65691911 | Msa0036850:CDS | 25.0% |
! | CATTAAAGATCCAAATATAC+AGG | - | chr1_1:65692253-65692272 | None:intergenic | 25.0% |
! | TGTAAAATGTGTCATATAAG+TGG | - | chr1_1:65692282-65692301 | None:intergenic | 25.0% |
!! | ATGAAGTACTTAATCTTAAG+TGG | + | chr1_1:65692463-65692482 | Msa0036850:CDS | 25.0% |
! | ATAGTTATTACTTCTTCATC+TGG | - | chr1_1:65692495-65692514 | None:intergenic | 25.0% |
!!! | AATTTTTTGGCAAGATAATC+AGG | + | chr1_1:65692597-65692616 | Msa0036850:intron | 25.0% |
!!! | ACATTTCTAGTAAATGAGAA+TGG | + | chr1_1:65692651-65692670 | Msa0036850:CDS | 25.0% |
!!! | CATTTCTAGTAAATGAGAAT+GGG | + | chr1_1:65692652-65692671 | Msa0036850:CDS | 25.0% |
! | CTTAAAAAATGATTCCAATC+TGG | - | chr1_1:65692923-65692942 | None:intergenic | 25.0% |
! | TTTGAATGTTTAACACATAG+TGG | - | chr1_1:65693015-65693034 | None:intergenic | 25.0% |
!! | ACATTCAAAATTGTTGTTGA+AGG | + | chr1_1:65693026-65693045 | Msa0036850:intron | 25.0% |
!! | ATAATTCATGATCTAGTTTC+AGG | - | chr1_1:65693143-65693162 | None:intergenic | 25.0% |
! | AACATTATGAAAACTATGCA+AGG | - | chr1_1:65693171-65693190 | None:intergenic | 25.0% |
! | CATTATTCATGCATTTGATA+TGG | + | chr1_1:65693322-65693341 | Msa0036850:intron | 25.0% |
! | TTATTCATGCATTTGATATG+GGG | + | chr1_1:65693324-65693343 | Msa0036850:intron | 25.0% |
! | TAAAATAAAGGAACACAAAG+GGG | - | chr1_1:65693510-65693529 | None:intergenic | 25.0% |
!!! | TCAATTTTTTTTCTCAGATG+TGG | - | chr1_1:65693563-65693582 | None:intergenic | 25.0% |
! | TTCCTTTAGCATAAGTATAT+AGG | + | chr1_1:65694049-65694068 | Msa0036850:intron | 25.0% |
!!! | AAACTTTTAAGAAGTCTCAT+TGG | + | chr1_1:65694099-65694118 | Msa0036850:intron | 25.0% |
! | ATAAAGTAGAAATGAAAAGG+AGG | - | chr1_1:65694260-65694279 | None:intergenic | 25.0% |
!! | TTTTCTGTAATAGATTGAAC+AGG | - | chr1_1:65694311-65694330 | None:intergenic | 25.0% |
!!! | TATCAATTTGTTTTCATGGT+AGG | - | chr1_1:65694426-65694445 | None:intergenic | 25.0% |
! | AAAAAGAAACTAATCCTACA+AGG | + | chr1_1:65694498-65694517 | Msa0036850:intron | 25.0% |
! | AATTATCCTAATTACCTTGT+AGG | - | chr1_1:65694515-65694534 | None:intergenic | 25.0% |
! | AAAACAGTAACATATTATGC+AGG | - | chr1_1:65694652-65694671 | None:intergenic | 25.0% |
!! | TGCATAATATGTTACTGTTT+TGG | + | chr1_1:65694651-65694670 | Msa0036850:intron | 25.0% |
! | GTAGAATCATAGATGTTAAT+AGG | - | chr1_1:65694904-65694923 | None:intergenic | 25.0% |
! | CAAGTTAAATTAACTCGAAA+AGG | - | chr1_1:65695105-65695124 | None:intergenic | 25.0% |
AATTCTCATTCAAACAACGA+TGG | + | chr1_1:65688899-65688918 | Msa0036850:exon | 30.0% | |
ATTCTCATTCAAACAACGAT+GGG | + | chr1_1:65688900-65688919 | Msa0036850:exon | 30.0% | |
!! | TTGTTCTCCTTCATTGATTT+GGG | - | chr1_1:65689079-65689098 | None:intergenic | 30.0% |
! | TTTGTTCTCCTTCATTGATT+TGG | - | chr1_1:65689080-65689099 | None:intergenic | 30.0% |
ATTTACCAGTTTCTTGTAAG+TGG | + | chr1_1:65689148-65689167 | Msa0036850:intron | 30.0% | |
!! | GATTTTGATGTAGATTGTTG+TGG | + | chr1_1:65689238-65689257 | Msa0036850:intron | 30.0% |
TCCAAGATAGCTTATGAAAA+CGG | - | chr1_1:65689474-65689493 | None:intergenic | 30.0% | |
TTTCATAAGTTCTTCCAAAC+AGG | + | chr1_1:65689537-65689556 | Msa0036850:intron | 30.0% | |
CAAAACGACTTATTCTCATA+TGG | - | chr1_1:65689809-65689828 | None:intergenic | 30.0% | |
!! | GTATCCAGATATGTTTTTGA+TGG | + | chr1_1:65689863-65689882 | Msa0036850:intron | 30.0% |
AGAATCAAGAGCTGAAAAAA+CGG | + | chr1_1:65689903-65689922 | Msa0036850:CDS | 30.0% | |
!! | CTGAAAAAACGGTATTTTTG+CGG | + | chr1_1:65689914-65689933 | Msa0036850:intron | 30.0% |
!! | TGAAAAAACGGTATTTTTGC+GGG | + | chr1_1:65689915-65689934 | Msa0036850:intron | 30.0% |
!!! | AATGGATTGAAACAAGGTTT+TGG | + | chr1_1:65690285-65690304 | Msa0036850:intron | 30.0% |
!!! | CAAAAGACTTTTAAGACTCA+TGG | + | chr1_1:65690370-65690389 | Msa0036850:CDS | 30.0% |
!!! | CATTTTAGTTTTCAAGAAGG+TGG | - | chr1_1:65690563-65690582 | None:intergenic | 30.0% |
ATTTAAGAAAACCTAAAGGG+AGG | - | chr1_1:65690817-65690836 | None:intergenic | 30.0% | |
CTAACGATGTTACATAACAA+TGG | - | chr1_1:65690913-65690932 | None:intergenic | 30.0% | |
TAATATACCACAGTCTAGTA+TGG | - | chr1_1:65691004-65691023 | None:intergenic | 30.0% | |
TTTGATGAGATACGAAAAGT+AGG | + | chr1_1:65691183-65691202 | Msa0036850:intron | 30.0% | |
! | TGCTATTTAAGAAGACCTTA+AGG | + | chr1_1:65691430-65691449 | Msa0036850:intron | 30.0% |
GCTATTTAAGAAGACCTTAA+GGG | + | chr1_1:65691431-65691450 | Msa0036850:intron | 30.0% | |
ATTAGATGGCGAAGAAATTT+AGG | - | chr1_1:65691706-65691725 | None:intergenic | 30.0% | |
TAAATTTCTTCGCCATCTAA+TGG | + | chr1_1:65691705-65691724 | Msa0036850:CDS | 30.0% | |
TTCAAAGAAGATTCCAGTAA+TGG | + | chr1_1:65691735-65691754 | Msa0036850:CDS | 30.0% | |
!! | ATACATTTTGAAAGCAGTCA+AGG | - | chr1_1:65691787-65691806 | None:intergenic | 30.0% |
TTGACTGCTTTCAAAATGTA+TGG | + | chr1_1:65691786-65691805 | Msa0036850:intron | 30.0% | |
TGACTGCTTTCAAAATGTAT+GGG | + | chr1_1:65691787-65691806 | Msa0036850:intron | 30.0% | |
TAAGTCAATAAATTGGTCCA+TGG | - | chr1_1:65691881-65691900 | None:intergenic | 30.0% | |
! | TGTTTAGAGTTGAGTTTCAT+TGG | + | chr1_1:65692716-65692735 | Msa0036850:intron | 30.0% |
! | GTTTAGAGTTGAGTTTCATT+GGG | + | chr1_1:65692717-65692736 | Msa0036850:intron | 30.0% |
GTATTTCCAGAAAGAAAGTT+AGG | - | chr1_1:65692901-65692920 | None:intergenic | 30.0% | |
! | AACATTTATGGTCAGACTTT+TGG | + | chr1_1:65693069-65693088 | Msa0036850:intron | 30.0% |
AAGAAAAACTAAATCACAGC+AGG | - | chr1_1:65693095-65693114 | None:intergenic | 30.0% | |
TAGTTTCAGGAAGACAAATA+CGG | - | chr1_1:65693130-65693149 | None:intergenic | 30.0% | |
CAATTTAATGCGACTTATCA+TGG | - | chr1_1:65693253-65693272 | None:intergenic | 30.0% | |
AACGTTAAGACAAACATTGT+TGG | + | chr1_1:65693374-65693393 | Msa0036850:intron | 30.0% | |
ACGTTAAGACAAACATTGTT+GGG | + | chr1_1:65693375-65693394 | Msa0036850:intron | 30.0% | |
!! | ATTGAAAACACTGATTTGTG+TGG | + | chr1_1:65693413-65693432 | Msa0036850:intron | 30.0% |
ATTTGTTCACTAACTGGATT+TGG | + | chr1_1:65693466-65693485 | Msa0036850:intron | 30.0% | |
AAAATAAAGGAACACAAAGG+GGG | - | chr1_1:65693509-65693528 | None:intergenic | 30.0% | |
!!! | TTTTTTTTCTCAGATGTGGA+AGG | - | chr1_1:65693559-65693578 | None:intergenic | 30.0% |
! | AAAATTGAAGTACCAGAAAC+AGG | + | chr1_1:65693575-65693594 | Msa0036850:intron | 30.0% |
TTGGTAAAAATTCCTGTTTC+TGG | - | chr1_1:65693590-65693609 | None:intergenic | 30.0% | |
! | ATTTTGCTACACTTAATGAC+AGG | + | chr1_1:65693645-65693664 | Msa0036850:intron | 30.0% |
TTGGAACACAAACTATAGAT+CGG | - | chr1_1:65693778-65693797 | None:intergenic | 30.0% | |
AGACAAATTATGCATTAGCA+TGG | - | chr1_1:65693878-65693897 | None:intergenic | 30.0% | |
AGCCTATATACTTATGCTAA+AGG | - | chr1_1:65694054-65694073 | None:intergenic | 30.0% | |
TTGTTTCAAGCCTAATCAAT+GGG | - | chr1_1:65694146-65694165 | None:intergenic | 30.0% | |
! | GAAACAAGTTTCCATTGATT+AGG | + | chr1_1:65694159-65694178 | Msa0036850:intron | 30.0% |
! | GTTTGGTATGATTGATGATT+TGG | + | chr1_1:65694342-65694361 | Msa0036850:intron | 30.0% |
ACTAATCCTACAAGGTAATT+AGG | + | chr1_1:65694506-65694525 | Msa0036850:intron | 30.0% | |
!!! | ATGTACTCTTTTTTCTTGAC+AGG | + | chr1_1:65694696-65694715 | Msa0036850:intron | 30.0% |
TGAATGATGCTAAAGCTAAA+GGG | + | chr1_1:65694728-65694747 | Msa0036850:CDS | 30.0% | |
CGGTAAGAAGAAAAAATAGT+TGG | + | chr1_1:65694777-65694796 | Msa0036850:exon | 30.0% | |
AGTTGGATTTGTATCTTAGA+TGG | + | chr1_1:65694794-65694813 | Msa0036850:exon | 30.0% | |
GTTGGATTTGTATCTTAGAT+GGG | + | chr1_1:65694795-65694814 | Msa0036850:exon | 30.0% | |
AGATGTTAATAGGTGCAAAA+GGG | - | chr1_1:65694894-65694913 | None:intergenic | 30.0% | |
TAGATGTTAATAGGTGCAAA+AGG | - | chr1_1:65694895-65694914 | None:intergenic | 30.0% | |
CAAAAAACCAAAGAAAAGAG+AGG | - | chr1_1:65694926-65694945 | None:intergenic | 30.0% | |
!!! | TTTCTTTGGTTTTTTGCAGT+TGG | + | chr1_1:65694930-65694949 | Msa0036850:intron | 30.0% |
GTTTGAATGAGAATTTGCAG+AGG | - | chr1_1:65688894-65688913 | None:intergenic | 35.0% | |
TCAAACAACGATGGGTATTA+AGG | + | chr1_1:65688908-65688927 | Msa0036850:exon | 35.0% | |
TAATGCTCCCAAATCAATGA+AGG | + | chr1_1:65689069-65689088 | Msa0036850:CDS | 35.0% | |
TAGCATCAACAGCAATCTTA+CGG | - | chr1_1:65689120-65689139 | None:intergenic | 35.0% | |
TGAAACCACTTACAAGAAAC+TGG | - | chr1_1:65689156-65689175 | None:intergenic | 35.0% | |
! | GAAATGTTGACTAATGAAGC+TGG | + | chr1_1:65689275-65689294 | Msa0036850:CDS | 35.0% |
AGATAAGCTTAATCCCTGTT+TGG | + | chr1_1:65689347-65689366 | Msa0036850:intron | 35.0% | |
TCAAATAACCTGATCCAAAC+AGG | + | chr1_1:65689588-65689607 | Msa0036850:intron | 35.0% | |
! | GCATTGGTAAAAATCGACAA+GGG | - | chr1_1:65689841-65689860 | None:intergenic | 35.0% |
!! | AGCATTGGTAAAAATCGACA+AGG | - | chr1_1:65689842-65689861 | None:intergenic | 35.0% |
CTTCCCATCAAAAACATATC+TGG | - | chr1_1:65689870-65689889 | None:intergenic | 35.0% | |
!! | GAAAAAACGGTATTTTTGCG+GGG | + | chr1_1:65689916-65689935 | Msa0036850:intron | 35.0% |
! | GAGGTATATGCATAGTTTGT+TGG | + | chr1_1:65690070-65690089 | Msa0036850:intron | 35.0% |
AAATCAGGATATTCATCCCT+TGG | + | chr1_1:65690133-65690152 | Msa0036850:intron | 35.0% | |
! | CTGATCTTTGTTGTCATTTC+AGG | + | chr1_1:65690156-65690175 | Msa0036850:intron | 35.0% |
TGTACAATGAGTTCACCATT+TGG | + | chr1_1:65690443-65690462 | Msa0036850:intron | 35.0% | |
! | AATTTGAAGCCTTAGCCAAA+TGG | - | chr1_1:65690461-65690480 | None:intergenic | 35.0% |
! | AATCCTTTTCATACAGACCA+TGG | + | chr1_1:65690602-65690621 | Msa0036850:intron | 35.0% |
TTTCCATGGTCTGTATGAAA+AGG | - | chr1_1:65690608-65690627 | None:intergenic | 35.0% | |
! | TCCTTTTCAAACACACTTCA+TGG | + | chr1_1:65690756-65690775 | Msa0036850:intron | 35.0% |
TCCATGAAGTGTGTTTGAAA+AGG | - | chr1_1:65690760-65690779 | None:intergenic | 35.0% | |
ACGATGTTACATAACAATGG+AGG | - | chr1_1:65690910-65690929 | None:intergenic | 35.0% | |
AAAATATCTCATGGAGTGTG+AGG | - | chr1_1:65690969-65690988 | None:intergenic | 35.0% | |
! | ACTCCATGAGATATTTTCTC+TGG | + | chr1_1:65690972-65690991 | Msa0036850:intron | 35.0% |
CAACCAGAGAAAATATCTCA+TGG | - | chr1_1:65690978-65690997 | None:intergenic | 35.0% | |
! | GAAGGAAATAGCTTTTCACT+TGG | + | chr1_1:65691124-65691143 | Msa0036850:intron | 35.0% |
TTGGAGATAGACATTCGTTT+AGG | + | chr1_1:65691143-65691162 | Msa0036850:intron | 35.0% | |
ATAGAAGGTAACAGGAAGAA+TGG | - | chr1_1:65691279-65691298 | None:intergenic | 35.0% | |
TTCTTCCTGTTACCTTCTAT+TGG | + | chr1_1:65691279-65691298 | Msa0036850:intron | 35.0% | |
GAATGAAAACCACCAATAGA+AGG | - | chr1_1:65691294-65691313 | None:intergenic | 35.0% | |
ATTTAAGAAGACCTTAAGGG+AGG | + | chr1_1:65691434-65691453 | Msa0036850:intron | 35.0% | |
TATTATACAGGTGTATGCTG+TGG | + | chr1_1:65691645-65691664 | Msa0036850:intron | 35.0% | |
TTGAACTAGGATCCATTAGA+TGG | - | chr1_1:65691720-65691739 | None:intergenic | 35.0% | |
ACTGGAATCTTCTTTGAACT+AGG | - | chr1_1:65691733-65691752 | None:intergenic | 35.0% | |
AATGGAATTTGACGTTGCAA+AGG | + | chr1_1:65691753-65691772 | Msa0036850:CDS | 35.0% | |
TTGAAAGCAGTCAAGGATAA+CGG | - | chr1_1:65691780-65691799 | None:intergenic | 35.0% | |
! | TCTCATGTTTCAGATTTTGG+AGG | + | chr1_1:65691843-65691862 | Msa0036850:intron | 35.0% |
TAATAATCAATGTGTGCCAC+AGG | + | chr1_1:65692037-65692056 | Msa0036850:intron | 35.0% | |
!!! | TTTTTTCAATAGAGCCGTGT+TGG | - | chr1_1:65692096-65692115 | None:intergenic | 35.0% |
CGGCTCTATTGAAAAAATAC+TGG | + | chr1_1:65692099-65692118 | Msa0036850:CDS | 35.0% | |
TGGAAAACATAAGCAAAGAG+AGG | + | chr1_1:65692119-65692138 | Msa0036850:CDS | 35.0% | |
!!! | TTTTCAAGTGCATGCAATAG+AGG | + | chr1_1:65692174-65692193 | Msa0036850:intron | 35.0% |
TGCATTACGAATCAGATATC+TGG | + | chr1_1:65692227-65692246 | Msa0036850:intron | 35.0% | |
AGATATCTGGCCTGTATATT+TGG | + | chr1_1:65692240-65692259 | Msa0036850:intron | 35.0% | |
GTTATTACTTCTTCATCTGG+AGG | - | chr1_1:65692492-65692511 | None:intergenic | 35.0% | |
AGTATTCTTTCAAAGGGACA+AGG | + | chr1_1:65692532-65692551 | Msa0036850:intron | 35.0% | |
TTGCATGTTGTCTTTCTTAC+AGG | + | chr1_1:65692620-65692639 | Msa0036850:intron | 35.0% | |
TGCATGTTGTCTTTCTTACA+GGG | + | chr1_1:65692621-65692640 | Msa0036850:intron | 35.0% | |
! | TCTTTCTGGAAATACCAGAT+TGG | + | chr1_1:65692906-65692925 | Msa0036850:intron | 35.0% |
ATCCATCAGTACCTATCAAA+CGG | + | chr1_1:65692953-65692972 | Msa0036850:CDS | 35.0% | |
GAATGTTTAACACATAGTGG+AGG | - | chr1_1:65693012-65693031 | None:intergenic | 35.0% | |
ATTCTCCACCAGAACATTTA+TGG | + | chr1_1:65693057-65693076 | Msa0036850:intron | 35.0% | |
AAGTCTGACCATAAATGTTC+TGG | - | chr1_1:65693068-65693087 | None:intergenic | 35.0% | |
AAGAGGATGAAAATTAAGCG+AGG | - | chr1_1:65693195-65693214 | None:intergenic | 35.0% | |
CATCGATATGACATCATAAG+AGG | - | chr1_1:65693212-65693231 | None:intergenic | 35.0% | |
!!! | GCATTTTAAAGTCCGAGATA+TGG | + | chr1_1:65693294-65693313 | Msa0036850:intron | 35.0% |
! | GTGAACAAATGATGGGATAA+AGG | - | chr1_1:65693456-65693475 | None:intergenic | 35.0% |
CCAGTTAGTGAACAAATGAT+GGG | - | chr1_1:65693463-65693482 | None:intergenic | 35.0% | |
TCCAGTTAGTGAACAAATGA+TGG | - | chr1_1:65693464-65693483 | None:intergenic | 35.0% | |
AAATAAAGGAACACAAAGGG+GGG | - | chr1_1:65693508-65693527 | None:intergenic | 35.0% | |
GACATCTTATGATCAATTGC+CGG | - | chr1_1:65693700-65693719 | None:intergenic | 35.0% | |
! | TTAGCATGGATTGACATTGA+AGG | - | chr1_1:65693864-65693883 | None:intergenic | 35.0% |
TAAAACTACATCAGGCCTTA+CGG | + | chr1_1:65693946-65693965 | Msa0036850:intron | 35.0% | |
!! | TAACTCTGAAATGTTGTTCC+TGG | + | chr1_1:65694015-65694034 | Msa0036850:intron | 35.0% |
AAAGGAACTAAAGTGAAACC+AGG | - | chr1_1:65694036-65694055 | None:intergenic | 35.0% | |
AGCATAAGTATATAGGCTTC+TGG | + | chr1_1:65694056-65694075 | Msa0036850:intron | 35.0% | |
! | GAAACAAGTTCCCATTGATT+AGG | + | chr1_1:65694133-65694152 | Msa0036850:intron | 35.0% |
CTTGTTTCAAGCCTAATCAA+TGG | - | chr1_1:65694147-65694166 | None:intergenic | 35.0% | |
! | TGTTTGAGATTGAGGCTTAT+TGG | - | chr1_1:65694287-65694306 | None:intergenic | 35.0% |
ATATGAGAAGTAATCTCCAG+TGG | + | chr1_1:65694460-65694479 | Msa0036850:intron | 35.0% | |
! | TGAGTATCTAAAACTACCAC+TGG | - | chr1_1:65694479-65694498 | None:intergenic | 35.0% |
AGGCTTCTTGTTAGAAGATA+TGG | - | chr1_1:65694549-65694568 | None:intergenic | 35.0% | |
!! | TATCCGCGTGTATTTTGAAA+AGG | - | chr1_1:65694585-65694604 | None:intergenic | 35.0% |
!!! | TGTTACTGTTTTGGTTCTGT+AGG | + | chr1_1:65694660-65694679 | Msa0036850:intron | 35.0% |
! | AAAGAGTACATGTCAAACCA+TGG | - | chr1_1:65694687-65694706 | None:intergenic | 35.0% |
!! | TTAGCTTTAGCATCATTCAC+TGG | - | chr1_1:65694727-65694746 | None:intergenic | 35.0% |
GTGAATGATGCTAAAGCTAA+AGG | + | chr1_1:65694727-65694746 | Msa0036850:CDS | 35.0% | |
AGGGAGTAACAAGAAAACTA+AGG | + | chr1_1:65694747-65694766 | Msa0036850:CDS | 35.0% | |
AGTAACAAGAAAACTAAGGC+CGG | + | chr1_1:65694751-65694770 | Msa0036850:CDS | 35.0% | |
AAACATCTACAACACTAACC+TGG | - | chr1_1:65694841-65694860 | None:intergenic | 35.0% | |
! | GATTCTACCTCTCTTTTCTT+TGG | + | chr1_1:65694916-65694935 | Msa0036850:intron | 35.0% |
TTGTGATACAATGCTTCATG+TGG | + | chr1_1:65695060-65695079 | Msa0036850:three_prime_UTR | 35.0% | |
TGACGGCAGAAAGATGAATA+AGG | - | chr1_1:65688853-65688872 | None:intergenic | 40.0% | |
TAATGTGAACTGGAGTGTGA+CGG | - | chr1_1:65688870-65688889 | None:intergenic | 40.0% | |
TTGCAGAGGATAATGTGAAC+TGG | - | chr1_1:65688880-65688899 | None:intergenic | 40.0% | |
! | GGGTTTAACGAAGCTTTTAG+CGG | + | chr1_1:65689045-65689064 | Msa0036850:intron | 40.0% |
TAGATTGTTGTGGGAAGAAG+TGG | + | chr1_1:65689248-65689267 | Msa0036850:intron | 40.0% | |
ATGAAGCTGGTGAAGTTACT+AGG | + | chr1_1:65689288-65689307 | Msa0036850:intron | 40.0% | |
!! | GCCGTTTTCATAAGCTATCT+TGG | + | chr1_1:65689470-65689489 | Msa0036850:intron | 40.0% |
AACACAATTAAGGGCCTGTT+TGG | - | chr1_1:65689605-65689624 | None:intergenic | 40.0% | |
ATTTGCAAGGAATGTTTGCG+CGG | + | chr1_1:65689705-65689724 | Msa0036850:intron | 40.0% | |
! | ACAATCAGACTTCTAGAAGC+CGG | + | chr1_1:65689728-65689747 | Msa0036850:CDS | 40.0% |
ACATATCTGGATACGAGCAT+TGG | - | chr1_1:65689857-65689876 | None:intergenic | 40.0% | |
AGCTCTTGATTCTTCATCTC+CGG | - | chr1_1:65689896-65689915 | None:intergenic | 40.0% | |
! | TTGTTGGCGACTTTTCTATG+TGG | + | chr1_1:65690086-65690105 | Msa0036850:intron | 40.0% |
TGACAACAAAGATCAGCCAA+GGG | - | chr1_1:65690152-65690171 | None:intergenic | 40.0% | |
ATGACAACAAAGATCAGCCA+AGG | - | chr1_1:65690153-65690172 | None:intergenic | 40.0% | |
ATTCAGTAAACGGACAGTGA+AGG | + | chr1_1:65690204-65690223 | Msa0036850:CDS | 40.0% | |
ATGAGTTCACCATTTGGCTA+AGG | + | chr1_1:65690449-65690468 | Msa0036850:intron | 40.0% | |
TCTTCCACTCTTTGCAAAAC+TGG | + | chr1_1:65690662-65690681 | Msa0036850:intron | 40.0% | |
CACTCTTTGCAAAACTGGAA+CGG | + | chr1_1:65690667-65690686 | Msa0036850:intron | 40.0% | |
AATTACACTCACCTCCCTTT+AGG | + | chr1_1:65690803-65690822 | Msa0036850:intron | 40.0% | |
! | GTTGATTCCATACTAGACTG+TGG | + | chr1_1:65690994-65691013 | Msa0036850:intron | 40.0% |
CACAATAATTCGCCATTGCT+TGG | - | chr1_1:65691075-65691094 | None:intergenic | 40.0% | |
CAATGGCGAATTATTGTGAC+CGG | + | chr1_1:65691077-65691096 | Msa0036850:intron | 40.0% | |
AATTATTGTGACCGGTGGTA+TGG | + | chr1_1:65691085-65691104 | Msa0036850:intron | 40.0% | |
! | GGTGTCGTATGAACAAATGA+AGG | + | chr1_1:65691106-65691125 | Msa0036850:intron | 40.0% |
GAGATAGACATTCGTTTAGG+TGG | + | chr1_1:65691146-65691165 | Msa0036850:intron | 40.0% | |
TTCCTGTTACCTTCTATTGG+TGG | + | chr1_1:65691282-65691301 | Msa0036850:intron | 40.0% | |
AACCACCAATAGAAGGTAAC+AGG | - | chr1_1:65691287-65691306 | None:intergenic | 40.0% | |
! | GTGGTTTTCATTCGCAATGT+GGG | + | chr1_1:65691301-65691320 | Msa0036850:intron | 40.0% |
! | TTTTCATTCGCAATGTGGGT+GGG | + | chr1_1:65691305-65691324 | Msa0036850:intron | 40.0% |
! | GTGCTTGAGAGTATAACCAA+TGG | + | chr1_1:65691333-65691352 | Msa0036850:intron | 40.0% |
! | TGAGAGTATAACCAATGGTG+CGG | + | chr1_1:65691338-65691357 | Msa0036850:intron | 40.0% |
AATTACACTCACCTCCCTTA+AGG | - | chr1_1:65691448-65691467 | None:intergenic | 40.0% | |
GACATGGATTCCTTAACGTT+TGG | + | chr1_1:65691676-65691695 | Msa0036850:CDS | 40.0% | |
TTTAGGAGCTCCAAACGTTA+AGG | - | chr1_1:65691689-65691708 | None:intergenic | 40.0% | |
GCAACGTCAAATTCCATTAC+TGG | - | chr1_1:65691751-65691770 | None:intergenic | 40.0% | |
GATTACTGTGACAACATTCG+AGG | + | chr1_1:65691919-65691938 | Msa0036850:CDS | 40.0% | |
!! | TTTGTCCCGCTTTTATCCAA+CGG | + | chr1_1:65691947-65691966 | Msa0036850:intron | 40.0% |
!! | TTCAAGTTTACCACCGATTC+AGG | + | chr1_1:65692367-65692386 | Msa0036850:intron | 40.0% |
!! | ACGACTTTTTAAAGAGCCAG+AGG | + | chr1_1:65692428-65692447 | Msa0036850:CDS | 40.0% |
TCATCATCAGTTATGACCTC+TGG | - | chr1_1:65692447-65692466 | None:intergenic | 40.0% | |
GCATGTTGTCTTTCTTACAG+GGG | + | chr1_1:65692622-65692641 | Msa0036850:intron | 40.0% | |
! | AGAATGGGTTCAACAGTGAT+AGG | + | chr1_1:65692667-65692686 | Msa0036850:CDS | 40.0% |
! | GAATGGGTTCAACAGTGATA+GGG | + | chr1_1:65692668-65692687 | Msa0036850:CDS | 40.0% |
GCAAAGAACAAGTCATCACA+AGG | + | chr1_1:65692814-65692833 | Msa0036850:CDS | 40.0% | |
GCACGACAAGACAATAGAAA+AGG | - | chr1_1:65692879-65692898 | None:intergenic | 40.0% | |
!! | TTCCGTTTGATAGGTACTGA+TGG | - | chr1_1:65692958-65692977 | None:intergenic | 40.0% |
ATCAGTACCTATCAAACGGA+AGG | + | chr1_1:65692957-65692976 | Msa0036850:CDS | 40.0% | |
GTACATACCTTCCGTTTGAT+AGG | - | chr1_1:65692967-65692986 | None:intergenic | 40.0% | |
! | CAAAATTGTTGTTGAAGGCC+TGG | + | chr1_1:65693031-65693050 | Msa0036850:intron | 40.0% |
TCTGACCATAAATGTTCTGG+TGG | - | chr1_1:65693065-65693084 | None:intergenic | 40.0% | |
CCCATCATTTGTTCACTAAC+TGG | + | chr1_1:65693460-65693479 | Msa0036850:intron | 40.0% | |
CGTGCTTAGATCTTTCAAAC+CGG | + | chr1_1:65693678-65693697 | Msa0036850:intron | 40.0% | |
TGCGAATTTCTAACTGCTCA+AGG | + | chr1_1:65693725-65693744 | Msa0036850:intron | 40.0% | |
AGACAATGGCATGGAAAGAT+TGG | - | chr1_1:65693797-65693816 | None:intergenic | 40.0% | |
ATTGACATTGAAGGTTCACC+AGG | - | chr1_1:65693855-65693874 | None:intergenic | 40.0% | |
AGTCATCTCTGCCTAATCAA+TGG | - | chr1_1:65694173-65694192 | None:intergenic | 40.0% | |
ATTGATTAGGCAGAGATGAC+TGG | + | chr1_1:65694172-65694191 | Msa0036850:intron | 40.0% | |
! | GAACAGGTTGTTTGAGATTG+AGG | - | chr1_1:65694295-65694314 | None:intergenic | 40.0% |
! | GAAAAGGCTGTTGCTTCATT+AGG | - | chr1_1:65694569-65694588 | None:intergenic | 40.0% |
! | CAGCCTTTTCAAAATACACG+CGG | + | chr1_1:65694579-65694598 | Msa0036850:intron | 40.0% |
!!! | TTTTTTCTTCTTACCGCCAC+CGG | - | chr1_1:65694773-65694792 | None:intergenic | 40.0% |
GAGTCATTTACATGTTGACC+AGG | + | chr1_1:65694820-65694839 | Msa0036850:three_prime_UTR | 40.0% | |
GGACAGTCACAAAAATTAGC+TGG | - | chr1_1:65694873-65694892 | None:intergenic | 40.0% | |
!!! | GTTTTTTGCAGTTGGCATGA+AGG | + | chr1_1:65694938-65694957 | Msa0036850:intron | 40.0% |
AGTTCTTCCAAACAGGCTCA+CGG | + | chr1_1:65689544-65689563 | Msa0036850:intron | 45.0% | |
ATAAGTTCCGTGAGCCTGTT+TGG | - | chr1_1:65689554-65689573 | None:intergenic | 45.0% | |
ATTAAGGGCCTGTTTGGATC+AGG | - | chr1_1:65689599-65689618 | None:intergenic | 45.0% | |
! | CAATCAGACTTCTAGAAGCC+GGG | + | chr1_1:65689729-65689748 | Msa0036850:CDS | 45.0% |
!! | GAATTACACTGGCTTCATCC+CGG | - | chr1_1:65689750-65689769 | None:intergenic | 45.0% |
!! | TGTTTTTGATGGGAAGCCAC+CGG | + | chr1_1:65689874-65689893 | Msa0036850:CDS | 45.0% |
TCTTGATTCTTCATCTCCGG+TGG | - | chr1_1:65689893-65689912 | None:intergenic | 45.0% | |
GTCATTTCAGGCTGACAACA+AGG | + | chr1_1:65690168-65690187 | Msa0036850:intron | 45.0% | |
GCTAAGGCTTCAAATTCTGC+AGG | + | chr1_1:65690465-65690484 | Msa0036850:intron | 45.0% | |
TGCACTTTGCAAAGCTGGAA+AGG | + | chr1_1:65690516-65690535 | Msa0036850:CDS | 45.0% | |
! | CGTTCCAGTTTTGCAAAGAG+TGG | - | chr1_1:65690669-65690688 | None:intergenic | 45.0% |
GAGCTTAAAGCTCCAAGCAA+TGG | + | chr1_1:65691060-65691079 | Msa0036850:intron | 45.0% | |
TTCATACGACACCATACCAC+CGG | - | chr1_1:65691099-65691118 | None:intergenic | 45.0% | |
CGAAAAGTAGGTTTGCGAAG+AGG | + | chr1_1:65691195-65691214 | Msa0036850:intron | 45.0% | |
! | GGTGGTTTTCATTCGCAATG+TGG | + | chr1_1:65691300-65691319 | Msa0036850:intron | 45.0% |
! | GTTTTCATTCGCAATGTGGG+TGG | + | chr1_1:65691304-65691323 | Msa0036850:intron | 45.0% |
TTTCATTCGCAATGTGGGTG+GGG | + | chr1_1:65691306-65691325 | Msa0036850:intron | 45.0% | |
GACAATAATAGCCGCACCAT+TGG | - | chr1_1:65691352-65691371 | None:intergenic | 45.0% | |
!! | TTGTCCCGCTTTTATCCAAC+GGG | + | chr1_1:65691948-65691967 | Msa0036850:intron | 45.0% |
TAGCACCCGTTGGATAAAAG+CGG | - | chr1_1:65691956-65691975 | None:intergenic | 45.0% | |
TCAATGTGTGCCACAGGTAT+TGG | + | chr1_1:65692043-65692062 | Msa0036850:intron | 45.0% | |
CAATGTGTGCCACAGGTATT+GGG | + | chr1_1:65692044-65692063 | Msa0036850:intron | 45.0% | |
! | AATGTGTGCCACAGGTATTG+GGG | + | chr1_1:65692045-65692064 | Msa0036850:intron | 45.0% |
CAACAGTGATAGGGTGACAA+AGG | + | chr1_1:65692677-65692696 | Msa0036850:CDS | 45.0% | |
AGAACAAGTCATCACAAGGC+CGG | + | chr1_1:65692818-65692837 | Msa0036850:CDS | 45.0% | |
GTCGTGCCTAACTTTCTTTC+TGG | + | chr1_1:65692892-65692911 | Msa0036850:intron | 45.0% | |
!! | GGTACTGATGGATTTGCAGT+TGG | - | chr1_1:65692946-65692965 | None:intergenic | 45.0% |
AGTGGAGGTGATAGATGTAG+TGG | - | chr1_1:65692997-65693016 | None:intergenic | 45.0% | |
!! | ACACTGATTTGTGTGGCAAC+TGG | + | chr1_1:65693420-65693439 | Msa0036850:intron | 45.0% |
GCAGTTAGAAATTCGCAGAG+AGG | - | chr1_1:65693722-65693741 | None:intergenic | 45.0% | |
TTCTAACTGCTCAAGGTCCA+TGG | + | chr1_1:65693732-65693751 | Msa0036850:intron | 45.0% | |
! | TGCTCAAGGTCCATGGTTTT+TGG | + | chr1_1:65693739-65693758 | Msa0036850:intron | 45.0% |
TATAGATCGGCATGCTCAAC+TGG | - | chr1_1:65693765-65693784 | None:intergenic | 45.0% | |
CTTTCCATGCCATTGTCTAG+AGG | + | chr1_1:65693799-65693818 | Msa0036850:intron | 45.0% | |
AAGCAGACACCTCTAGACAA+TGG | - | chr1_1:65693811-65693830 | None:intergenic | 45.0% | |
!! | TTGTCTAGAGGTGTCTGCTT+TGG | + | chr1_1:65693811-65693830 | Msa0036850:intron | 45.0% |
!!! | GTTTTGGTTCTGTAGGTCCA+TGG | + | chr1_1:65694667-65694686 | Msa0036850:intron | 45.0% |
AACAAGAAAACTAAGGCCGG+TGG | + | chr1_1:65694754-65694773 | Msa0036850:CDS | 45.0% | |
! | TTTTGCAGTTGGCATGAAGG+AGG | + | chr1_1:65694941-65694960 | Msa0036850:intron | 45.0% |
TTTGCAGTTGGCATGAAGGA+GGG | + | chr1_1:65694942-65694961 | Msa0036850:intron | 45.0% | |
!!! | TTCAATTTTTAATATTATAA+TGG | + | chr1_1:65690267-65690286 | Msa0036850:intron | 5.0% |
TGCAACGTCACCTCAACAAC+AGG | - | chr1_1:65690401-65690420 | None:intergenic | 50.0% | |
CATTGAGCCTCTGCTTCTGA+GGG | - | chr1_1:65690493-65690512 | None:intergenic | 50.0% | |
ACATTGAGCCTCTGCTTCTG+AGG | - | chr1_1:65690494-65690513 | None:intergenic | 50.0% | |
TGTGCTGCACTTTGCAAAGC+TGG | + | chr1_1:65690511-65690530 | Msa0036850:CDS | 50.0% | |
ATCTCATGGAGTGTGAGGCA+GGG | - | chr1_1:65690964-65690983 | None:intergenic | 50.0% | |
TATCTCATGGAGTGTGAGGC+AGG | - | chr1_1:65690965-65690984 | None:intergenic | 50.0% | |
GTTAACATGTGGGACGAGCT+TGG | + | chr1_1:65691030-65691049 | Msa0036850:intron | 50.0% | |
TGGCGAATTATTGTGACCGG+TGG | + | chr1_1:65691080-65691099 | Msa0036850:intron | 50.0% | |
! | TGCTGTGGCTTCTGAAGACA+TGG | + | chr1_1:65691660-65691679 | Msa0036850:CDS | 50.0% |
GGAGGAGCTAGATTTGACCA+TGG | + | chr1_1:65691861-65691880 | Msa0036850:CDS | 50.0% | |
AGCACCCGTTGGATAAAAGC+GGG | - | chr1_1:65691955-65691974 | None:intergenic | 50.0% | |
! | GCTTTTATCCAACGGGTGCT+AGG | + | chr1_1:65691955-65691974 | Msa0036850:intron | 50.0% |
!! | ATGTGTGCCACAGGTATTGG+GGG | + | chr1_1:65692046-65692065 | Msa0036850:intron | 50.0% |
CTGAAGCTCATACGCCAACA+CGG | + | chr1_1:65692079-65692098 | Msa0036850:CDS | 50.0% | |
!! | TTACCACCGATTCAGGTACC+AGG | + | chr1_1:65692374-65692393 | Msa0036850:intron | 50.0% |
CTGGTACCTGGTACCTGAAT+CGG | - | chr1_1:65692383-65692402 | None:intergenic | 50.0% | |
GGTACCAGGTACCAGATGAT+TGG | + | chr1_1:65692388-65692407 | Msa0036850:intron | 50.0% | |
! | ACCAGATGATTGGCCGTATC+AGG | + | chr1_1:65692398-65692417 | Msa0036850:CDS | 50.0% |
TCCTGATACGGCCAATCATC+TGG | - | chr1_1:65692402-65692421 | None:intergenic | 50.0% | |
! | AGATGATTGGCCGTATCAGG+AGG | + | chr1_1:65692401-65692420 | Msa0036850:CDS | 50.0% |
GTTCTGGTGGAGAATTTGCC+AGG | - | chr1_1:65693052-65693071 | None:intergenic | 50.0% | |
GCTCAACTGGCCAAAAACCA+TGG | - | chr1_1:65693752-65693771 | None:intergenic | 50.0% | |
GACACCTCTAGACAATGGCA+TGG | - | chr1_1:65693806-65693825 | None:intergenic | 50.0% | |
TGCCTGAAGCTGAATAGACC+TGG | + | chr1_1:65693834-65693853 | Msa0036850:intron | 50.0% | |
CACCAGGTCTATTCAGCTTC+AGG | - | chr1_1:65693839-65693858 | None:intergenic | 50.0% | |
AAGAAAACTAAGGCCGGTGG+CGG | + | chr1_1:65694757-65694776 | Msa0036850:CDS | 50.0% | |
! | CACCTTTACAGGAGAGTGCG+CGG | + | chr1_1:65688806-65688825 | Msa0036850:five_prime_UTR | 55.0% |
! | ACCTTTACAGGAGAGTGCGC+GGG | + | chr1_1:65688807-65688826 | Msa0036850:five_prime_UTR | 55.0% |
CAGTCTCTCAAAGAGAGCCG+AGG | + | chr1_1:65690021-65690040 | Msa0036850:intron | 55.0% | |
TAGAGCTTCCGTCAAACCCG+CGG | - | chr1_1:65690050-65690069 | None:intergenic | 55.0% | |
! | GGGTTTGACGGAAGCTCTAG+AGG | + | chr1_1:65690051-65690070 | Msa0036850:CDS | 55.0% |
!! | CATGGGAGTGCCTGTTGTTG+AGG | + | chr1_1:65690388-65690407 | Msa0036850:CDS | 55.0% |
TGTGAGGCAGGGGAAAATGG+AGG | - | chr1_1:65690953-65690972 | None:intergenic | 55.0% | |
GAGTGTGAGGCAGGGGAAAA+TGG | - | chr1_1:65690956-65690975 | None:intergenic | 55.0% | |
TCTCATGGAGTGTGAGGCAG+GGG | - | chr1_1:65690963-65690982 | None:intergenic | 55.0% | |
AGCTTGAACCTAGCACCCGT+TGG | - | chr1_1:65691966-65691985 | None:intergenic | 55.0% | |
!! | TGTGTGCCACAGGTATTGGG+GGG | + | chr1_1:65692047-65692066 | Msa0036850:intron | 55.0% |
TGTCATCCCCCCAATACCTG+TGG | - | chr1_1:65692056-65692075 | None:intergenic | 55.0% | |
GTACCTGGTACCTGAATCGG+TGG | - | chr1_1:65692380-65692399 | None:intergenic | 55.0% | |
ACGGCCAATCATCTGGTACC+TGG | - | chr1_1:65692395-65692414 | None:intergenic | 55.0% | |
AGTCGTCGAGCCTCCTGATA+CGG | - | chr1_1:65692414-65692433 | None:intergenic | 55.0% | |
CTTACGGTGCTCGACTGCTA+GGG | + | chr1_1:65693962-65693981 | Msa0036850:intron | 55.0% | |
TCCCGCGCACTCTCCTGTAA+AGG | - | chr1_1:65688811-65688830 | None:intergenic | 60.0% | |
AAAGAGAGCCGAGGCTACCG+CGG | + | chr1_1:65690030-65690049 | Msa0036850:CDS | 60.0% | |
! | CCTAGCAGTCGAGCACCGTA+AGG | - | chr1_1:65693964-65693983 | None:intergenic | 60.0% |
CCTTACGGTGCTCGACTGCT+AGG | + | chr1_1:65693961-65693980 | Msa0036850:intron | 60.0% | |
AAGAGAGCCGAGGCTACCGC+GGG | + | chr1_1:65690031-65690050 | Msa0036850:CDS | 65.0% | |
CGTCAAACCCGCGGTAGCCT+CGG | - | chr1_1:65690041-65690060 | None:intergenic | 65.0% | |
CGAGGCTACCGCGGGTTTGA+CGG | + | chr1_1:65690039-65690058 | Msa0036850:CDS | 65.0% | |
GCAGGCACCCTCAGAAGCAG+AGG | + | chr1_1:65690483-65690502 | Msa0036850:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 65688799 | 65695138 | 65688799 | ID=Msa0036850;Name=Msa0036850 |
chr1_1 | mRNA | 65688799 | 65695138 | 65688799 | ID=Msa0036850-mRNA-1;Parent=Msa0036850;Name=Msa0036850-mRNA-1;_AED=0.22;_eAED=0.22;_QI=119|0.88|0.83|1|0.94|0.88|18|236|383 |
chr1_1 | exon | 65688799 | 65688929 | 65688799 | ID=Msa0036850-mRNA-1:exon:21155;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65689046 | 65689162 | 65689046 | ID=Msa0036850-mRNA-1:exon:21156;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65689251 | 65689296 | 65689251 | ID=Msa0036850-mRNA-1:exon:21157;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65689714 | 65689762 | 65689714 | ID=Msa0036850-mRNA-1:exon:21158;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65689871 | 65689924 | 65689871 | ID=Msa0036850-mRNA-1:exon:21159;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65690024 | 65690072 | 65690024 | ID=Msa0036850-mRNA-1:exon:21160;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65690178 | 65690225 | 65690178 | ID=Msa0036850-mRNA-1:exon:21161;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65690344 | 65690409 | 65690344 | ID=Msa0036850-mRNA-1:exon:21162;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65690487 | 65690558 | 65690487 | ID=Msa0036850-mRNA-1:exon:21163;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65691655 | 65691774 | 65691655 | ID=Msa0036850-mRNA-1:exon:21164;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65691856 | 65691940 | 65691856 | ID=Msa0036850-mRNA-1:exon:21165;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65692059 | 65692140 | 65692059 | ID=Msa0036850-mRNA-1:exon:21166;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65692389 | 65692503 | 65692389 | ID=Msa0036850-mRNA-1:exon:21167;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65692642 | 65692698 | 65692642 | ID=Msa0036850-mRNA-1:exon:21168;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65692793 | 65692839 | 65692793 | ID=Msa0036850-mRNA-1:exon:21169;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65692924 | 65692978 | 65692924 | ID=Msa0036850-mRNA-1:exon:21170;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65694718 | 65694841 | 65694718 | ID=Msa0036850-mRNA-1:exon:21171;Parent=Msa0036850-mRNA-1 |
chr1_1 | exon | 65694949 | 65695138 | 65694949 | ID=Msa0036850-mRNA-1:exon:21172;Parent=Msa0036850-mRNA-1 |
chr1_1 | five_prime_UTR | 65688799 | 65688917 | 65688799 | ID=Msa0036850-mRNA-1:five_prime_utr;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65688918 | 65688929 | 65688918 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65689046 | 65689162 | 65689046 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65689251 | 65689296 | 65689251 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65689714 | 65689762 | 65689714 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65689871 | 65689924 | 65689871 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65690024 | 65690072 | 65690024 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65690178 | 65690225 | 65690178 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65690344 | 65690409 | 65690344 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65690487 | 65690558 | 65690487 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65691655 | 65691774 | 65691655 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65691856 | 65691940 | 65691856 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65692059 | 65692140 | 65692059 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65692389 | 65692503 | 65692389 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65692642 | 65692698 | 65692642 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65692793 | 65692839 | 65692793 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65692924 | 65692978 | 65692924 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | CDS | 65694718 | 65694795 | 65694718 | ID=Msa0036850-mRNA-1:cds;Parent=Msa0036850-mRNA-1 |
chr1_1 | three_prime_UTR | 65694796 | 65694841 | 65694796 | ID=Msa0036850-mRNA-1:three_prime_utr;Parent=Msa0036850-mRNA-1 |
chr1_1 | three_prime_UTR | 65694949 | 65695138 | 65694949 | ID=Msa0036850-mRNA-1:three_prime_utr;Parent=Msa0036850-mRNA-1 |
Gene Sequence |
Protein sequence |