Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086170 | sp|Q6ICX4|PTBP3_ARATH | 82.658 | 444 | 64 | 2 | 1 | 443 | 1 | 432 | 0.0 | 751 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086170 | G7IBX9 | 99.323 | 443 | 3 | 0 | 1 | 443 | 1 | 443 | 0.0 | 913 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0086170 | Msa0132450 | 0.874242 | 7.870449e-68 | -8.615850e-47 |
| Msa0086170 | Msa0139720 | 0.809609 | 1.738469e-50 | -8.615850e-47 |
| Msa0086170 | Msa0223380 | -0.803672 | 3.117332e-49 | -8.615850e-47 |
| Msa0086170 | Msa0277280 | 0.809893 | 1.510800e-50 | -8.615850e-47 |
| Msa0086170 | Msa0405660 | 0.800270 | 1.559110e-48 | -8.615850e-47 |
| Msa0086170 | Msa0531990 | 0.813525 | 2.449526e-51 | -8.615850e-47 |
| Msa0086170 | Msa0532100 | 0.813966 | 1.958885e-51 | -8.615850e-47 |
| Msa0086170 | Msa0615270 | 0.805495 | 1.298953e-49 | -8.615850e-47 |
| Msa0086170 | Msa0834450 | -0.802712 | 4.926326e-49 | -8.615850e-47 |
| Msa0086170 | Msa1012920 | -0.812864 | 3.421444e-51 | -8.615850e-47 |
| Msa0086170 | Msa1079730 | 0.811732 | 6.044131e-51 | -8.615850e-47 |
| Msa0086170 | Msa1105270 | -0.808556 | 2.922624e-50 | -8.615850e-47 |
| Msa0086170 | Msa1132560 | 0.814643 | 1.387971e-51 | -8.615850e-47 |
| Msa0086170 | Msa1168040 | 0.821914 | 3.133655e-53 | -8.615850e-47 |
| Msa0086170 | Msa1176070 | -0.800553 | 1.365274e-48 | -8.615850e-47 |
| Msa0086170 | Msa1444250 | 0.804392 | 2.207867e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086170 | MtrunA17_Chr1g0201711 | 99.323 | 443 | 3 | 0 | 1 | 443 | 1 | 443 | 0.0 | 913 |
| Msa0086170 | MtrunA17_Chr6g0464571 | 78.104 | 443 | 91 | 1 | 1 | 443 | 1 | 437 | 0.0 | 730 |
| Msa0086170 | MtrunA17_Chr6g0464521 | 84.416 | 231 | 36 | 0 | 1 | 231 | 1 | 231 | 2.07e-144 | 412 |
| Msa0086170 | MtrunA17_Chr6g0464531 | 84.038 | 213 | 34 | 0 | 231 | 443 | 1 | 213 | 4.15e-127 | 366 |
| Msa0086170 | MtrunA17_Chr6g0464551 | 64.015 | 264 | 77 | 5 | 128 | 391 | 16 | 261 | 9.42e-111 | 328 |
| Msa0086170 | MtrunA17_Chr7g0217671 | 32.277 | 347 | 182 | 11 | 4 | 333 | 17 | 327 | 3.24e-44 | 161 |
| Msa0086170 | MtrunA17_Chr7g0217671 | 32.258 | 217 | 107 | 6 | 21 | 197 | 129 | 345 | 6.20e-20 | 92.0 |
| Msa0086170 | MtrunA17_Chr3g0126461 | 31.322 | 348 | 186 | 12 | 4 | 334 | 16 | 327 | 4.76e-40 | 150 |
| Msa0086170 | MtrunA17_Chr3g0126461 | 32.143 | 224 | 98 | 6 | 21 | 197 | 128 | 344 | 8.66e-24 | 103 |
| Msa0086170 | MtrunA17_Chr1g0158921 | 29.650 | 371 | 185 | 12 | 4 | 334 | 16 | 350 | 8.21e-33 | 129 |
| Msa0086170 | MtrunA17_Chr1g0158921 | 32.547 | 212 | 104 | 5 | 25 | 197 | 156 | 367 | 2.78e-23 | 101 |
| Msa0086170 | MtrunA17_Chr6g0453381 | 40.179 | 112 | 61 | 4 | 54 | 162 | 10 | 118 | 2.75e-19 | 83.6 |
| Msa0086170 | MtrunA17_Chr6g0453371 | 33.793 | 145 | 80 | 5 | 92 | 223 | 23 | 164 | 2.20e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0086170 | AT1G43190.2 | 82.658 | 444 | 64 | 2 | 1 | 443 | 1 | 432 | 0.0 | 751 |
| Msa0086170 | AT1G43190.1 | 82.658 | 444 | 64 | 2 | 1 | 443 | 1 | 432 | 0.0 | 751 |
| Msa0086170 | AT1G43190.3 | 82.207 | 444 | 64 | 3 | 1 | 443 | 1 | 430 | 0.0 | 742 |
| Msa0086170 | AT3G01150.1 | 31.319 | 364 | 196 | 12 | 4 | 348 | 15 | 343 | 1.28e-44 | 160 |
| Msa0086170 | AT3G01150.1 | 30.741 | 270 | 131 | 9 | 15 | 243 | 122 | 376 | 7.81e-22 | 97.4 |
| Msa0086170 | AT3G01150.3 | 32.424 | 330 | 175 | 10 | 4 | 320 | 15 | 309 | 7.47e-44 | 156 |
| Msa0086170 | AT3G01150.3 | 30.159 | 189 | 94 | 4 | 15 | 165 | 122 | 310 | 1.58e-14 | 74.7 |
| Msa0086170 | AT5G53180.1 | 31.034 | 348 | 187 | 12 | 4 | 334 | 16 | 327 | 5.03e-40 | 149 |
| Msa0086170 | AT5G53180.1 | 33.962 | 212 | 100 | 7 | 21 | 192 | 128 | 339 | 1.10e-24 | 105 |
| Msa0086170 | AT5G53180.6 | 33.493 | 209 | 100 | 6 | 23 | 192 | 1 | 209 | 3.94e-26 | 107 |
| Msa0086170 | AT5G53180.2 | 33.173 | 208 | 100 | 6 | 24 | 192 | 32 | 239 | 5.40e-25 | 105 |
| Msa0086170 | AT5G53180.4 | 33.173 | 208 | 100 | 6 | 24 | 192 | 33 | 240 | 5.88e-25 | 105 |
| Msa0086170 | AT5G53180.3 | 33.173 | 208 | 100 | 6 | 24 | 192 | 18 | 225 | 5.92e-25 | 105 |
| Msa0086170 | AT5G53180.5 | 46.154 | 104 | 54 | 2 | 91 | 192 | 126 | 229 | 4.10e-22 | 97.1 |
| Msa0086170 | AT3G01150.2 | 29.032 | 248 | 130 | 7 | 115 | 348 | 3 | 218 | 8.98e-22 | 95.1 |
| Msa0086170 | AT3G01150.2 | 31.034 | 261 | 124 | 9 | 24 | 243 | 6 | 251 | 2.22e-21 | 94.0 |
| Msa0086170 | AT3G01150.4 | 30.374 | 214 | 109 | 5 | 115 | 320 | 3 | 184 | 6.31e-21 | 90.5 |
| Msa0086170 | AT3G01150.4 | 30.556 | 180 | 87 | 4 | 24 | 165 | 6 | 185 | 2.25e-14 | 72.0 |
Find 135 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACTTGTTCTCCCTTTA+TGG | 0.035664 | 1_2:+66788586 | Msa0086170:CDS |
| GCGGCCATTGCAGCTGCTTT+TGG | 0.074456 | 1_2:+66788393 | Msa0086170:CDS |
| TTTAAATCATTGTTGTATTT+TGG | 0.136382 | 1_2:+66790136 | Msa0086170:three_prime_UTR |
| TACGAACTTTGTAGGCTTTC+AGG | 0.175411 | 1_2:+66787046 | Msa0086170:intron |
| TTCTGTTCTGTAGGGAGATT+TGG | 0.179215 | 1_2:-66787578 | None:intergenic |
| AGAGACAAGGATTCTGAATT+TGG | 0.219094 | 1_2:+66789848 | Msa0086170:three_prime_UTR |
| ATACAACATAATGGCATATT+TGG | 0.228189 | 1_2:-66790159 | None:intergenic |
| CTTCAGTTATTTCAACCTTT+TGG | 0.234793 | 1_2:+66785357 | Msa0086170:CDS |
| GATGAGAAAAGAAATGATTA+AGG | 0.272550 | 1_2:-66789977 | None:intergenic |
| CGCTTTCTGGCTCGGTAATT+CGG | 0.274128 | 1_2:+66789739 | Msa0086170:CDS |
| AGCTGCAATGGCCGCAGCAT+TGG | 0.284533 | 1_2:-66788385 | None:intergenic |
| TTCTCACAATGTTTCCATAA+AGG | 0.300059 | 1_2:-66788600 | None:intergenic |
| TCTCACAATGTTTCCATAAA+GGG | 0.309290 | 1_2:-66788599 | None:intergenic |
| GCTGCAATGGCCGCAGCATT+GGG | 0.311225 | 1_2:-66788384 | None:intergenic |
| AAGCATGCTACCTCGCTTTC+TGG | 0.321751 | 1_2:+66789726 | Msa0086170:CDS |
| TGGTTCCATGCTCCTCTAGA+AGG | 0.326729 | 1_2:-66789611 | None:intergenic |
| GGTTTGCCTCCTGGAATAAC+TGG | 0.333821 | 1_2:+66788420 | Msa0086170:CDS |
| CCTTAGATTCAGTCTTCAAT+TGG | 0.336895 | 1_2:+66784053 | Msa0086170:five_prime_UTR |
| CCAATTGAAGACTGAATCTA+AGG | 0.339157 | 1_2:-66784053 | None:intergenic |
| TACTGCAAGAACTGCACTTC+AGG | 0.342948 | 1_2:+66787103 | Msa0086170:CDS |
| CAGAAGGAACGTCTTGCATT+TGG | 0.346584 | 1_2:-66785549 | None:intergenic |
| TCTGTTCTGTAGGGAGATTT+GGG | 0.347660 | 1_2:-66787577 | None:intergenic |
| ATTGGTGAAAGTTGAGTCTT+AGG | 0.365812 | 1_2:+66790063 | Msa0086170:three_prime_UTR |
| AACTCTGTTGTGATTGATAC+TGG | 0.373607 | 1_2:-66787076 | None:intergenic |
| TCAGCACCTTGTGTTATGTT+TGG | 0.381551 | 1_2:-66789450 | None:intergenic |
| AGGAAGCATGTATGGTGTTC+AGG | 0.389056 | 1_2:+66787782 | Msa0086170:CDS |
| ATACAGTACATCCACTGTTA+TGG | 0.393709 | 1_2:-66786178 | None:intergenic |
| ATGTATGGTGTTCAGGGTTC+TGG | 0.394858 | 1_2:+66787789 | Msa0086170:CDS |
| AGCAAAGTATTTGAGATGAA+TGG | 0.395330 | 1_2:+66789642 | Msa0086170:CDS |
| GCTCTTGATGAGATGAAAAC+TGG | 0.405496 | 1_2:-66785781 | None:intergenic |
| AAGAGTACCTTATGCTTGGC+TGG | 0.410645 | 1_2:-66785603 | None:intergenic |
| TCATTTGTCCCAGTTATTCC+AGG | 0.410874 | 1_2:-66788429 | None:intergenic |
| CATCTTCAGTGATGTCTTGT+GGG | 0.410989 | 1_2:-66789578 | None:intergenic |
| GAATTGTAACTAAGAGAATT+CGG | 0.415308 | 1_2:-66786140 | None:intergenic |
| CTTGGAAACCATCTCCCATC+TGG | 0.416528 | 1_2:-66788660 | None:intergenic |
| TCTTCTTCATTATCTTGTAA+TGG | 0.422111 | 1_2:+66789901 | Msa0086170:three_prime_UTR |
| GTTTACAGATTAATTTATCA+TGG | 0.422123 | 1_2:+66784459 | Msa0086170:intron |
| GAATAACTGGGACAAATGAT+AGG | 0.422703 | 1_2:+66788433 | Msa0086170:CDS |
| GCAAAGTATTTGAGATGAAT+GGG | 0.425279 | 1_2:+66789643 | Msa0086170:CDS |
| ACGGGTTCTTAACATTGTTA+AGG | 0.432457 | 1_2:-66789793 | None:intergenic |
| GTCATTCATGTTCGAAATGT+GGG | 0.433953 | 1_2:+66784496 | Msa0086170:CDS |
| CTTAGATTCAGTCTTCAATT+GGG | 0.436259 | 1_2:+66784054 | Msa0086170:five_prime_UTR |
| ACAAATGAATCATCTTCGTT+GGG | 0.440370 | 1_2:-66789548 | None:intergenic |
| CAGGGTTCTGGACCCAGGGC+AGG | 0.442597 | 1_2:+66787801 | Msa0086170:CDS |
| TGCTACCTCGCTTTCTGGCT+CGG | 0.444036 | 1_2:+66789731 | Msa0086170:CDS |
| ATTATAATAATGACCGTTCA+AGG | 0.444162 | 1_2:+66787457 | Msa0086170:CDS |
| AGATGGTTTCCAAGCTGAAC+TGG | 0.446354 | 1_2:+66788669 | Msa0086170:CDS |
| AGGTAGCATGCTTGCATACA+AGG | 0.447408 | 1_2:-66789716 | None:intergenic |
| TCAGTTTGAGACTGAGGATC+AGG | 0.451143 | 1_2:+66789683 | Msa0086170:CDS |
| GTGTTCAGGGTTCTGGACCC+AGG | 0.453204 | 1_2:+66787796 | Msa0086170:CDS |
| GGATTGAGAATACAACATAA+TGG | 0.463057 | 1_2:-66790168 | None:intergenic |
| TTATGATGGTTGCTGTCAGC+TGG | 0.464841 | 1_2:+66787230 | Msa0086170:CDS |
| CCGTTACTTCGGTTGTCCAC+GGG | 0.466121 | 1_2:-66789811 | None:intergenic |
| GGCCTGCCTTTCTGTTCTGT+AGG | 0.467800 | 1_2:-66787587 | None:intergenic |
| CGAACATGAATGACCTTGGA+AGG | 0.468919 | 1_2:-66784487 | None:intergenic |
| ATGAGAAAAGAAATGATTAA+GGG | 0.470357 | 1_2:-66789976 | None:intergenic |
| TATATTCTGCAATTGAGAAT+AGG | 0.470609 | 1_2:-66789766 | None:intergenic |
| GACAAATGAATCATCTTCGT+TGG | 0.470970 | 1_2:-66789549 | None:intergenic |
| TACAGTACATCCACTGTTAT+GGG | 0.471701 | 1_2:-66786177 | None:intergenic |
| TAGGGTCGCAATATTTATGA+TGG | 0.475560 | 1_2:+66787216 | Msa0086170:intron |
| CAGCTTGGATATGGTGATGC+AGG | 0.477074 | 1_2:+66787762 | Msa0086170:intron |
| ACCGTTACTTCGGTTGTCCA+CGG | 0.477723 | 1_2:-66789812 | None:intergenic |
| AATTCACTTGTAATTCATCA+AGG | 0.483108 | 1_2:-66787437 | None:intergenic |
| TCTGTGAAACAGCTTGGATA+TGG | 0.488413 | 1_2:+66787753 | Msa0086170:intron |
| GTAACTAAGAGAATTCGGTT+TGG | 0.488756 | 1_2:-66786135 | None:intergenic |
| GTTAAATTTAGCACCTGCCC+TGG | 0.490169 | 1_2:-66787814 | None:intergenic |
| TCTTCATTATCTTGTAATGG+TGG | 0.490760 | 1_2:+66789904 | Msa0086170:three_prime_UTR |
| TACTAACATAATGTAGAGTA+GGG | 0.492586 | 1_2:+66790026 | Msa0086170:three_prime_UTR |
| TTACTAACATAATGTAGAGT+AGG | 0.492786 | 1_2:+66790025 | Msa0086170:three_prime_UTR |
| GCCTGCCTTTCTGTTCTGTA+GGG | 0.494453 | 1_2:-66787586 | None:intergenic |
| AAATAAAGGTGGTGAAAAGA+AGG | 0.495349 | 1_2:-66790110 | None:intergenic |
| ATCTGGATAAGTGCATGATC+TGG | 0.502751 | 1_2:-66788643 | None:intergenic |
| GGAAGCATGTATGGTGTTCA+GGG | 0.508233 | 1_2:+66787783 | Msa0086170:CDS |
| AGCTTTGTGATGACTCCAAA+AGG | 0.509921 | 1_2:-66785372 | None:intergenic |
| AGCTAAGAGTACCTTATGCT+TGG | 0.512139 | 1_2:-66785607 | None:intergenic |
| GTGACATTTCAGAAGTCAGC+TGG | 0.518294 | 1_2:+66786237 | Msa0086170:CDS |
| CCTCAGTCTCAAACTGAACC+AGG | 0.518672 | 1_2:-66789677 | None:intergenic |
| GGTGATGCAGGAAGCATGTA+TGG | 0.523701 | 1_2:+66787774 | Msa0086170:CDS |
| TCATCTTCAGTGATGTCTTG+TGG | 0.524428 | 1_2:-66789579 | None:intergenic |
| ACAAGGATTCTGAATTTGGA+AGG | 0.525674 | 1_2:+66789852 | Msa0086170:three_prime_UTR |
| GCACTTATCCAGATGGGAGA+TGG | 0.531925 | 1_2:+66788652 | Msa0086170:CDS |
| TATCATGGCTGAACCTTCCA+AGG | 0.532831 | 1_2:+66784474 | Msa0086170:exon |
| CCCGTGGACAACCGAAGTAA+CGG | 0.532904 | 1_2:+66789811 | Msa0086170:three_prime_UTR |
| GTTGAGTCTTAGGAATAGAA+AGG | 0.534650 | 1_2:+66790073 | Msa0086170:three_prime_UTR |
| AGAGTACCTTATGCTTGGCT+GGG | 0.540483 | 1_2:-66785602 | None:intergenic |
| ATTTCGAACATGAATGACCT+TGG | 0.541812 | 1_2:-66784491 | None:intergenic |
| TAGCAGCGTTACGATTAAAA+CGG | 0.543089 | 1_2:-66789503 | None:intergenic |
| GAAACACCCAGCCAAGCATA+AGG | 0.545572 | 1_2:+66785596 | Msa0086170:CDS |
| TGTTCAGGGTTCTGGACCCA+GGG | 0.546711 | 1_2:+66787797 | Msa0086170:CDS |
| TCCCTACAGAACAGAAAGGC+AGG | 0.547542 | 1_2:+66787585 | Msa0086170:CDS |
| AAATACTTTGCTATTGACAA+TGG | 0.551736 | 1_2:-66789631 | None:intergenic |
| GGTCATTCATGTTCGAAATG+TGG | 0.557701 | 1_2:+66784495 | Msa0086170:CDS |
| TGAGAAAAGAAATGATTAAG+GGG | 0.558488 | 1_2:-66789975 | None:intergenic |
| TTAAATTTAGCACCTGCCCT+GGG | 0.559061 | 1_2:-66787813 | None:intergenic |
| GAGCATAACAACCGTTACTT+CGG | 0.568668 | 1_2:-66789822 | None:intergenic |
| AGTGTACAGCCAGTTCAGCT+TGG | 0.569092 | 1_2:-66788678 | None:intergenic |
| AGTGATGTCTTGTGGGAGTG+TGG | 0.570311 | 1_2:-66789571 | None:intergenic |
| TGTAAAGCACTAACTGCAGA+AGG | 0.572096 | 1_2:-66785565 | None:intergenic |
| AGATCATGCACTTATCCAGA+TGG | 0.574543 | 1_2:+66788645 | Msa0086170:CDS |
| CCTTCCAGTCGGATATCCAC+AGG | 0.574783 | 1_2:+66787912 | Msa0086170:intron |
| GAATGGGAAGAAACAAGGCC+TGG | 0.576914 | 1_2:+66789659 | Msa0086170:CDS |
| GTCTTAGGAATAGAAAGGAC+GGG | 0.580592 | 1_2:+66790078 | Msa0086170:three_prime_UTR |
| AGTCTTAGGAATAGAAAGGA+CGG | 0.587595 | 1_2:+66790077 | Msa0086170:three_prime_UTR |
| GGTTCCATGCTCCTCTAGAA+GGG | 0.591822 | 1_2:-66789610 | None:intergenic |
| GAGATGAATGGGAAGAAACA+AGG | 0.597286 | 1_2:+66789654 | Msa0086170:CDS |
| CCTGGTTCAGTTTGAGACTG+AGG | 0.597497 | 1_2:+66789677 | Msa0086170:CDS |
| GATCATGCACTTATCCAGAT+GGG | 0.599793 | 1_2:+66788646 | Msa0086170:CDS |
| GAGAAAAGAAATGATTAAGG+GGG | 0.600696 | 1_2:-66789974 | None:intergenic |
| AGAGACTGAATCACCTTGAA+CGG | 0.607191 | 1_2:-66787470 | None:intergenic |
| AATTACCGAGCCAGAAAGCG+AGG | 0.607510 | 1_2:-66789736 | None:intergenic |
| ACTGGCTGTACACTTTCTGA+AGG | 0.611721 | 1_2:+66788687 | Msa0086170:CDS |
| TGAGATTGTGACCCTTCTAG+AGG | 0.616426 | 1_2:+66789599 | Msa0086170:CDS |
| AAGTCAAGGACGAGGAGATG+AGG | 0.618331 | 1_2:+66785820 | Msa0086170:CDS |
| GTGACCCTTCTAGAGGAGCA+TGG | 0.626740 | 1_2:+66789606 | Msa0086170:CDS |
| GTTTGCCTCCTGGAATAACT+GGG | 0.627364 | 1_2:+66788421 | Msa0086170:CDS |
| AATCTCCCTACAGAACAGAA+AGG | 0.630603 | 1_2:+66787581 | Msa0086170:CDS |
| GTTGTTTGATAAGCGACTAG+AGG | 0.641453 | 1_2:+66789410 | Msa0086170:CDS |
| ACAACAATAGATCAAAGTCA+AGG | 0.643404 | 1_2:+66785806 | Msa0086170:CDS |
| ATTGAAGACTGAATCTAAGG+AGG | 0.644719 | 1_2:-66784050 | None:intergenic |
| GGTAGCATGCTTGCATACAA+GGG | 0.647100 | 1_2:-66789715 | None:intergenic |
| TGTTATGCTCAGTAGAGACA+AGG | 0.655812 | 1_2:+66789835 | Msa0086170:three_prime_UTR |
| CAAACGAAACATACTTGTGG+AGG | 0.658477 | 1_2:-66787608 | None:intergenic |
| CAAATGAATCATCTTCGTTG+GGG | 0.661543 | 1_2:-66789547 | None:intergenic |
| TCGTTGGGGAGCAGCAATAG+CGG | 0.661679 | 1_2:-66789533 | None:intergenic |
| TCATTCATGTTCGAAATGTG+GGG | 0.666929 | 1_2:+66784497 | Msa0086170:CDS |
| TTTGTCCCAGTTATTCCAGG+AGG | 0.668050 | 1_2:-66788426 | None:intergenic |
| TTAACAATGTTAAGAACCCG+TGG | 0.679719 | 1_2:+66789795 | Msa0086170:three_prime_UTR |
| ATAGATCAAAGTCAAGGACG+AGG | 0.680422 | 1_2:+66785812 | Msa0086170:CDS |
| AAGCATCCAAACATAACACA+AGG | 0.689131 | 1_2:+66789444 | Msa0086170:CDS |
| ACTGTAGATGCCCAATGCTG+CGG | 0.690338 | 1_2:+66788374 | Msa0086170:intron |
| CGTGCTCTATCCCATAACAG+TGG | 0.694871 | 1_2:+66786167 | Msa0086170:CDS |
| ACTAACATAATGTAGAGTAG+GGG | 0.698565 | 1_2:+66790027 | Msa0086170:three_prime_UTR |
| TGTGGGGCACGAAATATCCG+AGG | 0.714184 | 1_2:+66784513 | Msa0086170:CDS |
| TAGTCGCTTATCAAACAACA+TGG | 0.721208 | 1_2:-66789406 | None:intergenic |
| ATCTTCTCCACAGATCCATG+AGG | 0.742999 | 1_2:-66786213 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATAGCTTTTTTTTT+TGG | + | chr1_2:66784203-66784222 | Msa0086170:intron | 10.0% |
| !!! | ATTTTATAGCTTTTTTTTTT+GGG | + | chr1_2:66784204-66784223 | Msa0086170:intron | 10.0% |
| !!! | TCTAATTATCTTTTTATTTT+AGG | + | chr1_2:66785741-66785760 | Msa0086170:intron | 10.0% |
| !!! | CTAATTATCTTTTTATTTTA+GGG | + | chr1_2:66785742-66785761 | Msa0086170:intron | 10.0% |
| !!! | TAATTATCTTTTTATTTTAG+GGG | + | chr1_2:66785743-66785762 | Msa0086170:intron | 10.0% |
| !!! | TTTTTTTTTTTTATGTTTAG+CGG | + | chr1_2:66786807-66786826 | Msa0086170:intron | 10.0% |
| !!! | TTTTTTTTTTTAATGTTTAG+TGG | + | chr1_2:66786877-66786896 | Msa0086170:intron | 10.0% |
| !! | ATTTACTTTAAATTCTTATA+TGG | + | chr1_2:66787394-66787413 | Msa0086170:intron | 10.0% |
| !!! | TTTTATAGCTTTTTTTTTTG+GGG | + | chr1_2:66784205-66784224 | Msa0086170:intron | 15.0% |
| !! | TTATGTTCATTTACAATTAT+AGG | + | chr1_2:66785234-66785253 | Msa0086170:intron | 15.0% |
| !!! | AATTATCTTTTTATTTTAGG+GGG | + | chr1_2:66785744-66785763 | Msa0086170:intron | 15.0% |
| !! | AATTCAGAAAAAACTTAAAA+GGG | - | chr1_2:66786302-66786321 | None:intergenic | 15.0% |
| !! | AAATTCAGAAAAAACTTAAA+AGG | - | chr1_2:66786303-66786322 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTATGTTTAGC+GGG | + | chr1_2:66786808-66786827 | Msa0086170:intron | 15.0% |
| !!! | TTTGTAATTACATTTTCATA+TGG | + | chr1_2:66786938-66786957 | Msa0086170:intron | 15.0% |
| !!! | ATTTAAAGTAAATAAGAGAA+AGG | - | chr1_2:66787387-66787406 | None:intergenic | 15.0% |
| !! | AAAAAAATAAGAGAATAGAA+CGG | - | chr1_2:66788328-66788347 | None:intergenic | 15.0% |
| !! | TTATAATTAAATATTCAGCA+AGG | - | chr1_2:66788728-66788747 | None:intergenic | 15.0% |
| !! | GAATATTTAATTATAATACC+AGG | + | chr1_2:66788732-66788751 | Msa0086170:intron | 15.0% |
| !!! | ATTATTTTCTTAATTTTGGT+CGG | + | chr1_2:66788837-66788856 | Msa0086170:intron | 15.0% |
| !! | ATTTAAGTAAATGATTTACA+TGG | - | chr1_2:66789004-66789023 | None:intergenic | 15.0% |
| !! | TACTTTGTTAAAAAAAAATC+AGG | - | chr1_2:66789154-66789173 | None:intergenic | 15.0% |
| !!! | ATGTGTTAAATAATATGTTT+TGG | + | chr1_2:66789195-66789214 | Msa0086170:intron | 15.0% |
| !! | AATCTTATAAATAGAAAAGA+GGG | - | chr1_2:66789352-66789371 | None:intergenic | 15.0% |
| !! | GATTTAAAAATAAATAAAGG+TGG | - | chr1_2:66790124-66790143 | None:intergenic | 15.0% |
| !!! | TTTAAATCATTGTTGTATTT+TGG | + | chr1_2:66790136-66790155 | Msa0086170:three_prime_UTR | 15.0% |
| !!! | AATTCAACTAGAAAATTTTA+TGG | - | chr1_2:66790192-66790211 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTGAAAACAGAAT+TGG | - | chr1_2:66784166-66784185 | None:intergenic | 20.0% |
| !!! | TGATAATGATAGTCATAAAT+TGG | + | chr1_2:66784334-66784353 | Msa0086170:intron | 20.0% |
| !! | GTTTACAGATTAATTTATCA+TGG | + | chr1_2:66784459-66784478 | Msa0086170:intron | 20.0% |
| !!! | ACAATTGTTGTGTTTTTTTT+TGG | + | chr1_2:66784627-66784646 | Msa0086170:intron | 20.0% |
| !!! | CAATTGTTGTGTTTTTTTTT+GGG | + | chr1_2:66784628-66784647 | Msa0086170:intron | 20.0% |
| !!! | TTTTAGATATTGATTGTGAT+TGG | + | chr1_2:66784756-66784775 | Msa0086170:intron | 20.0% |
| !! | AAACAAACAATTTCATTTGA+AGG | - | chr1_2:66785438-66785457 | None:intergenic | 20.0% |
| !! | CCAATTAATATTAAAATCTC+CGG | + | chr1_2:66785713-66785732 | Msa0086170:intron | 20.0% |
| !! | AAAAGATAATTAGATTGTTC+CGG | - | chr1_2:66785735-66785754 | None:intergenic | 20.0% |
| !! | AAGTATATGATAAAGAGAAA+AGG | - | chr1_2:66786037-66786056 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCTAAGTTGTTAA+TGG | - | chr1_2:66786452-66786471 | None:intergenic | 20.0% |
| !! | TGTATTTGTAATAGTATGTT+TGG | - | chr1_2:66786595-66786614 | None:intergenic | 20.0% |
| !! | ACTTCTAAATGAATTTCTAA+AGG | + | chr1_2:66786768-66786787 | Msa0086170:intron | 20.0% |
| !!! | TTTTTTTTTTATGTTTAGCG+GGG | + | chr1_2:66786809-66786828 | Msa0086170:intron | 20.0% |
| !! | AAATGTAATTACAAAGCAAA+GGG | - | chr1_2:66786933-66786952 | None:intergenic | 20.0% |
| !! | AAAATGTAATTACAAAGCAA+AGG | - | chr1_2:66786934-66786953 | None:intergenic | 20.0% |
| !!! | ATTTTATTTGATGCATGTAT+AGG | + | chr1_2:66786988-66787007 | Msa0086170:intron | 20.0% |
| !!! | CTAAATATTGATTGAAACTT+TGG | + | chr1_2:66787186-66787205 | Msa0086170:intron | 20.0% |
| !! | TCTAAATAATTTCTGTGTAT+TGG | + | chr1_2:66787283-66787302 | Msa0086170:intron | 20.0% |
| !!! | CTTTATTTATCTGTTATGAA+TGG | + | chr1_2:66787664-66787683 | Msa0086170:intron | 20.0% |
| !! | AAAAAATTCCACAAATTGAT+TGG | - | chr1_2:66788099-66788118 | None:intergenic | 20.0% |
| !!! | TTTATTTTGCTTTTCAAATC+TGG | + | chr1_2:66788162-66788181 | Msa0086170:intron | 20.0% |
| !!! | TTATTTTGCTTTTCAAATCT+GGG | + | chr1_2:66788163-66788182 | Msa0086170:intron | 20.0% |
| !!! | AGTATGATTTTTTAGAAATC+TGG | + | chr1_2:66788279-66788298 | Msa0086170:intron | 20.0% |
| !!! | TTTAGTTTATTCAGATTTGA+TGG | - | chr1_2:66789304-66789323 | None:intergenic | 20.0% |
| !! | CAATCTTATAAATAGAAAAG+AGG | - | chr1_2:66789353-66789372 | None:intergenic | 20.0% |
| !!! | ATTTTCAATTTTGAGATGTA+GGG | + | chr1_2:66789381-66789400 | Msa0086170:intron | 20.0% |
| !! | ATGAGAAAAGAAATGATTAA+GGG | - | chr1_2:66789979-66789998 | None:intergenic | 20.0% |
| !!! | CTTCAACTTTTTCTTTTAAC+TGG | - | chr1_2:66784361-66784380 | None:intergenic | 25.0% |
| !!! | ATGTTTTTATGACTATGCTA+TGG | + | chr1_2:66784603-66784622 | Msa0086170:intron | 25.0% |
| !!! | TTTTAGAAATTTCTTCGTAG+TGG | + | chr1_2:66784719-66784738 | Msa0086170:intron | 25.0% |
| ! | TCACTTTCTCTAATTATTAC+CGG | + | chr1_2:66784903-66784922 | Msa0086170:intron | 25.0% |
| ! | GCAAAAGTTATAAATCTTTC+AGG | - | chr1_2:66785314-66785333 | None:intergenic | 25.0% |
| ! | TGATATCAAAACAATAGTTG+TGG | - | chr1_2:66785649-66785668 | None:intergenic | 25.0% |
| !!! | CCGGAGATTTTAATATTAAT+TGG | - | chr1_2:66785716-66785735 | None:intergenic | 25.0% |
| ! | ATAACAATACAAAGATCTAG+GGG | - | chr1_2:66785958-66785977 | None:intergenic | 25.0% |
| ! | GATAACAATACAAAGATCTA+GGG | - | chr1_2:66785959-66785978 | None:intergenic | 25.0% |
| ! | AGATAACAATACAAAGATCT+AGG | - | chr1_2:66785960-66785979 | None:intergenic | 25.0% |
| ! | GATCTTTGTATTGTTATCTT+AGG | + | chr1_2:66785961-66785980 | Msa0086170:intron | 25.0% |
| ! | GAATTGTAACTAAGAGAATT+CGG | - | chr1_2:66786143-66786162 | None:intergenic | 25.0% |
| !!! | AATTTTAACAGAGTGAATTG+AGG | + | chr1_2:66786318-66786337 | Msa0086170:intron | 25.0% |
| !! | GTATGTTTGGAATATATGAA+GGG | - | chr1_2:66786582-66786601 | None:intergenic | 25.0% |
| !! | AGTATGTTTGGAATATATGA+AGG | - | chr1_2:66786583-66786602 | None:intergenic | 25.0% |
| ! | TTGAATAAGTATAAGCATAG+TGG | + | chr1_2:66786655-66786674 | Msa0086170:intron | 25.0% |
| !! | TGATGTTGTTTGTATGTAAT+AGG | + | chr1_2:66786722-66786741 | Msa0086170:intron | 25.0% |
| !! | TAACATTTTCTCTCTGTTTT+TGG | + | chr1_2:66787131-66787150 | Msa0086170:intron | 25.0% |
| !! | TTGAAACTTTGGAAATTTCT+AGG | + | chr1_2:66787197-66787216 | Msa0086170:intron | 25.0% |
| !! | TGAAACTTTGGAAATTTCTA+GGG | + | chr1_2:66787198-66787217 | Msa0086170:intron | 25.0% |
| !!! | ATAATTTCTGTGTATTGGTT+TGG | + | chr1_2:66787288-66787307 | Msa0086170:intron | 25.0% |
| ! | AGTAAATAAGAGAAAGGAAA+AGG | - | chr1_2:66787381-66787400 | None:intergenic | 25.0% |
| ! | AATTCACTTGTAATTCATCA+AGG | - | chr1_2:66787440-66787459 | None:intergenic | 25.0% |
| ! | ATTATAATAATGACCGTTCA+AGG | + | chr1_2:66787457-66787476 | Msa0086170:CDS | 25.0% |
| !!! | CTAAATTTAACTGATTTGGT+TGG | + | chr1_2:66787826-66787845 | Msa0086170:intron | 25.0% |
| ! | GCAACATTAAAAATGTGTAA+TGG | + | chr1_2:66788029-66788048 | Msa0086170:intron | 25.0% |
| ! | AAAAATGTGTAATGGTTGTA+AGG | + | chr1_2:66788037-66788056 | Msa0086170:intron | 25.0% |
| ! | AAACAAATTTCGAGCTAAAT+AGG | - | chr1_2:66788538-66788557 | None:intergenic | 25.0% |
| ! | TTTATACAACGATAAATCTC+TGG | - | chr1_2:66788818-66788837 | None:intergenic | 25.0% |
| ! | TATTCCACACAATATACAAA+GGG | - | chr1_2:66789076-66789095 | None:intergenic | 25.0% |
| ! | TTATTCCACACAATATACAA+AGG | - | chr1_2:66789077-66789096 | None:intergenic | 25.0% |
| !! | AGGATCTATTTTATAAGTAG+AGG | + | chr1_2:66789109-66789128 | Msa0086170:intron | 25.0% |
| !!! | GATTTTCAATTTTGAGATGT+AGG | + | chr1_2:66789380-66789399 | Msa0086170:intron | 25.0% |
| !!! | AAATACTTTGCTATTGACAA+TGG | - | chr1_2:66789634-66789653 | None:intergenic | 25.0% |
| ! | TATATTCTGCAATTGAGAAT+AGG | - | chr1_2:66789769-66789788 | None:intergenic | 25.0% |
| ! | TCTTCTTCATTATCTTGTAA+TGG | + | chr1_2:66789901-66789920 | Msa0086170:three_prime_UTR | 25.0% |
| ! | TGAGAAAAGAAATGATTAAG+GGG | - | chr1_2:66789978-66789997 | None:intergenic | 25.0% |
| ! | GATGAGAAAAGAAATGATTA+AGG | - | chr1_2:66789980-66789999 | None:intergenic | 25.0% |
| ! | TTACTAACATAATGTAGAGT+AGG | + | chr1_2:66790025-66790044 | Msa0086170:three_prime_UTR | 25.0% |
| ! | TACTAACATAATGTAGAGTA+GGG | + | chr1_2:66790026-66790045 | Msa0086170:three_prime_UTR | 25.0% |
| ! | ATACAACATAATGGCATATT+TGG | - | chr1_2:66790162-66790181 | None:intergenic | 25.0% |
| CTTAGATTCAGTCTTCAATT+GGG | + | chr1_2:66784054-66784073 | Msa0086170:five_prime_UTR | 30.0% | |
| ! | TGAAAACAGAATTGGTGATT+TGG | - | chr1_2:66784158-66784177 | None:intergenic | 30.0% |
| CGCACATTCAAAACAAAATA+TGG | - | chr1_2:66784785-66784804 | None:intergenic | 30.0% | |
| !! | ACTTTTTCTTAGACCATGAT+CGG | + | chr1_2:66785109-66785128 | Msa0086170:intron | 30.0% |
| !! | CTTCAGTTATTTCAACCTTT+TGG | + | chr1_2:66785357-66785376 | Msa0086170:CDS | 30.0% |
| ! | GAAAGAGAAAACCTGATTTT+TGG | - | chr1_2:66785412-66785431 | None:intergenic | 30.0% |
| !! | TGGAGCACTTTTAAATTCTA+AGG | - | chr1_2:66785462-66785481 | None:intergenic | 30.0% |
| ! | GTTAGTGCTTTACAGTTTTA+TGG | + | chr1_2:66785574-66785593 | Msa0086170:CDS | 30.0% |
| ATGATCTTTGTCATCACATA+CGG | + | chr1_2:66785668-66785687 | Msa0086170:intron | 30.0% | |
| !!! | TATCTTTTTATTTTAGGGGG+AGG | + | chr1_2:66785747-66785766 | Msa0086170:intron | 30.0% |
| ACAACAATAGATCAAAGTCA+AGG | + | chr1_2:66785806-66785825 | Msa0086170:CDS | 30.0% | |
| !!! | TATCAAGTTTTTTCTCCTCA+TGG | + | chr1_2:66786198-66786217 | Msa0086170:CDS | 30.0% |
| TTTGTATGTAATAGGCACAT+AGG | + | chr1_2:66786730-66786749 | Msa0086170:intron | 30.0% | |
| ACGCATTATGCATGAATTAA+TGG | + | chr1_2:66786848-66786867 | Msa0086170:intron | 30.0% | |
| AAAACAAGAACTAACAAGTC+CGG | - | chr1_2:66787162-66787181 | None:intergenic | 30.0% | |
| GGATATTCAATTCTCAAAGT+AGG | + | chr1_2:66787251-66787270 | Msa0086170:intron | 30.0% | |
| GGTGCTAAATTTAACTGATT+TGG | + | chr1_2:66787822-66787841 | Msa0086170:intron | 30.0% | |
| ATATGAAAAATACTCACCTG+TGG | - | chr1_2:66787931-66787950 | None:intergenic | 30.0% | |
| GTCACAGTTTGATATTATTC+TGG | + | chr1_2:66787960-66787979 | Msa0086170:intron | 30.0% | |
| GTAATGGTTGTAAGGTATAA+CGG | + | chr1_2:66788045-66788064 | Msa0086170:intron | 30.0% | |
| ! | TTTTCAAATCTGGGTTTGAT+AGG | + | chr1_2:66788172-66788191 | Msa0086170:intron | 30.0% |
| TTTCAAATCTGGGTTTGATA+GGG | + | chr1_2:66788173-66788192 | Msa0086170:intron | 30.0% | |
| !!! | TGTTTTGAGTTTCTGTTTCT+TGG | + | chr1_2:66788210-66788229 | Msa0086170:intron | 30.0% |
| TCTCACAATGTTTCCATAAA+GGG | - | chr1_2:66788602-66788621 | None:intergenic | 30.0% | |
| TTCTCACAATGTTTCCATAA+AGG | - | chr1_2:66788603-66788622 | None:intergenic | 30.0% | |
| GTAAATTCATCAAGTAAACC+TGG | - | chr1_2:66788753-66788772 | None:intergenic | 30.0% | |
| CAGCAAACAACAATTACTTA+TGG | - | chr1_2:66788777-66788796 | None:intergenic | 30.0% | |
| TTCATCACAAGTTTCTTTGA+TGG | + | chr1_2:66788885-66788904 | Msa0086170:intron | 30.0% | |
| AAATCACATTTCTCTTTCTC+TGG | + | chr1_2:66788965-66788984 | Msa0086170:intron | 30.0% | |
| TGGAATAAGATTGCAATTGA+AGG | + | chr1_2:66789089-66789108 | Msa0086170:intron | 30.0% | |
| TCAGTTGTAATATTCTGACA+TGG | + | chr1_2:66789262-66789281 | Msa0086170:intron | 30.0% | |
| ACAAATGAATCATCTTCGTT+GGG | - | chr1_2:66789551-66789570 | None:intergenic | 30.0% | |
| ! | AGCAAAGTATTTGAGATGAA+TGG | + | chr1_2:66789642-66789661 | Msa0086170:CDS | 30.0% |
| ! | GCAAAGTATTTGAGATGAAT+GGG | + | chr1_2:66789643-66789662 | Msa0086170:CDS | 30.0% |
| TCTTCATTATCTTGTAATGG+TGG | + | chr1_2:66789904-66789923 | Msa0086170:three_prime_UTR | 30.0% | |
| GAGAAAAGAAATGATTAAGG+GGG | - | chr1_2:66789977-66789996 | None:intergenic | 30.0% | |
| ACTAACATAATGTAGAGTAG+GGG | + | chr1_2:66790027-66790046 | Msa0086170:three_prime_UTR | 30.0% | |
| AAATAAAGGTGGTGAAAAGA+AGG | - | chr1_2:66790113-66790132 | None:intergenic | 30.0% | |
| GGATTGAGAATACAACATAA+TGG | - | chr1_2:66790171-66790190 | None:intergenic | 30.0% | |
| ATTGAAGACTGAATCTAAGG+AGG | - | chr1_2:66784053-66784072 | None:intergenic | 35.0% | |
| CCAATTGAAGACTGAATCTA+AGG | - | chr1_2:66784056-66784075 | None:intergenic | 35.0% | |
| CCTTAGATTCAGTCTTCAAT+TGG | + | chr1_2:66784053-66784072 | Msa0086170:five_prime_UTR | 35.0% | |
| ATTTCGAACATGAATGACCT+TGG | - | chr1_2:66784494-66784513 | None:intergenic | 35.0% | |
| GTCATTCATGTTCGAAATGT+GGG | + | chr1_2:66784496-66784515 | Msa0086170:CDS | 35.0% | |
| TCATTCATGTTCGAAATGTG+GGG | + | chr1_2:66784497-66784516 | Msa0086170:CDS | 35.0% | |
| TTTCCTGATAAAAAGAGTCC+AGG | - | chr1_2:66784693-66784712 | None:intergenic | 35.0% | |
| TGTGAAATAAATGCCGATCA+TGG | - | chr1_2:66785125-66785144 | None:intergenic | 35.0% | |
| TCGACATGATTGGATAAGAA+TGG | + | chr1_2:66785161-66785180 | Msa0086170:intron | 35.0% | |
| TGATTGGATAAGAATGGAGT+TGG | + | chr1_2:66785167-66785186 | Msa0086170:intron | 35.0% | |
| AAATCATTCTGCAATCACAG+TGG | - | chr1_2:66785336-66785355 | None:intergenic | 35.0% | |
| TGGATAAGTGCCTGTAAATA+CGG | - | chr1_2:66785532-66785551 | None:intergenic | 35.0% | |
| TTAGGCTGTTACATTTCAGT+GGG | + | chr1_2:66785979-66785998 | Msa0086170:intron | 35.0% | |
| AAGAGAAGAGATAGAGAGAA+AGG | - | chr1_2:66786073-66786092 | None:intergenic | 35.0% | |
| GTAACTAAGAGAATTCGGTT+TGG | - | chr1_2:66786138-66786157 | None:intergenic | 35.0% | |
| TACAGTACATCCACTGTTAT+GGG | - | chr1_2:66786180-66786199 | None:intergenic | 35.0% | |
| ATACAGTACATCCACTGTTA+TGG | - | chr1_2:66786181-66786200 | None:intergenic | 35.0% | |
| AGGGAAAGAAAGAAGAGAAA+GGG | - | chr1_2:66786283-66786302 | None:intergenic | 35.0% | |
| AAGGGAAAGAAAGAAGAGAA+AGG | - | chr1_2:66786284-66786303 | None:intergenic | 35.0% | |
| TAACAGTGTCCAAGTACTAA+TGG | - | chr1_2:66786427-66786446 | None:intergenic | 35.0% | |
| ! | ATAAGCATAGTGGTGTCAAT+TGG | + | chr1_2:66786665-66786684 | Msa0086170:intron | 35.0% |
| CAAGTGTTATGCTACTATGA+GGG | - | chr1_2:66786704-66786723 | None:intergenic | 35.0% | |
| TCAAGTGTTATGCTACTATG+AGG | - | chr1_2:66786705-66786724 | None:intergenic | 35.0% | |
| AATAGGCACATAGGAGAAAA+AGG | + | chr1_2:66786739-66786758 | Msa0086170:intron | 35.0% | |
| ATAGGCACATAGGAGAAAAA+GGG | + | chr1_2:66786740-66786759 | Msa0086170:intron | 35.0% | |
| TACTTGCTTACGAACTTTGT+AGG | + | chr1_2:66787038-66787057 | Msa0086170:intron | 35.0% | |
| AACTCTGTTGTGATTGATAC+TGG | - | chr1_2:66787079-66787098 | None:intergenic | 35.0% | |
| TAGGGTCGCAATATTTATGA+TGG | + | chr1_2:66787216-66787235 | Msa0086170:intron | 35.0% | |
| AAGAGAAAGGAAAAGGTAGA+AGG | - | chr1_2:66787374-66787393 | None:intergenic | 35.0% | |
| TTGGCTACAATCGTAAAACT+TGG | - | chr1_2:66788080-66788099 | None:intergenic | 35.0% | |
| GATTGTAGCCAATCAATTTG+TGG | + | chr1_2:66788088-66788107 | Msa0086170:intron | 35.0% | |
| ! | AGTTTCTGTTTCTTGGACAA+TGG | + | chr1_2:66788217-66788236 | Msa0086170:intron | 35.0% |
| GAATAACTGGGACAAATGAT+AGG | + | chr1_2:66788433-66788452 | Msa0086170:CDS | 35.0% | |
| !! | AAAGAGAAAGCACTTACATC+AGG | - | chr1_2:66788486-66788505 | None:intergenic | 35.0% |
| ! | TTCAACTTGTTCTCCCTTTA+TGG | + | chr1_2:66788586-66788605 | Msa0086170:CDS | 35.0% |
| ACATTTCTCTTTCTCTGGTT+CGG | + | chr1_2:66788970-66788989 | Msa0086170:intron | 35.0% | |
| TGATCCCTTTGTATATTGTG+TGG | + | chr1_2:66789069-66789088 | Msa0086170:intron | 35.0% | |
| GTAGTACTAGTTGTTGTGTT+TGG | + | chr1_2:66789171-66789190 | Msa0086170:intron | 35.0% | |
| ! | TTGATGGCACTAAACAATGT+TGG | - | chr1_2:66789288-66789307 | None:intergenic | 35.0% |
| TAGTCGCTTATCAAACAACA+TGG | - | chr1_2:66789409-66789428 | None:intergenic | 35.0% | |
| AAGCATCCAAACATAACACA+AGG | + | chr1_2:66789444-66789463 | Msa0086170:CDS | 35.0% | |
| TAGCAGCGTTACGATTAAAA+CGG | - | chr1_2:66789506-66789525 | None:intergenic | 35.0% | |
| CAAATGAATCATCTTCGTTG+GGG | - | chr1_2:66789550-66789569 | None:intergenic | 35.0% | |
| GACAAATGAATCATCTTCGT+TGG | - | chr1_2:66789552-66789571 | None:intergenic | 35.0% | |
| ACGGGTTCTTAACATTGTTA+AGG | - | chr1_2:66789796-66789815 | None:intergenic | 35.0% | |
| TTAACAATGTTAAGAACCCG+TGG | + | chr1_2:66789795-66789814 | Msa0086170:three_prime_UTR | 35.0% | |
| AGAGACAAGGATTCTGAATT+TGG | + | chr1_2:66789848-66789867 | Msa0086170:three_prime_UTR | 35.0% | |
| ACAAGGATTCTGAATTTGGA+AGG | + | chr1_2:66789852-66789871 | Msa0086170:three_prime_UTR | 35.0% | |
| ATTGGTGAAAGTTGAGTCTT+AGG | + | chr1_2:66790063-66790082 | Msa0086170:three_prime_UTR | 35.0% | |
| GTTGAGTCTTAGGAATAGAA+AGG | + | chr1_2:66790073-66790092 | Msa0086170:three_prime_UTR | 35.0% | |
| AGTCTTAGGAATAGAAAGGA+CGG | + | chr1_2:66790077-66790096 | Msa0086170:three_prime_UTR | 35.0% | |
| GGTCATTCATGTTCGAAATG+TGG | + | chr1_2:66784495-66784514 | Msa0086170:CDS | 40.0% | |
| GAGAAAGAAAGTGAGAAGCA+GGG | - | chr1_2:66784544-66784563 | None:intergenic | 40.0% | |
| AGAGAAAGAAAGTGAGAAGC+AGG | - | chr1_2:66784545-66784564 | None:intergenic | 40.0% | |
| GAACTTGACATTGACCAAGA+GGG | + | chr1_2:66784650-66784669 | Msa0086170:intron | 40.0% | |
| ACCAAGAGGGTGAATGAAAA+GGG | + | chr1_2:66784663-66784682 | Msa0086170:intron | 40.0% | |
| ! | AGACCTGGACTCTTTTTATC+AGG | + | chr1_2:66784687-66784706 | Msa0086170:intron | 40.0% |
| TCGAATGTAATCACGTGTGT+CGG | - | chr1_2:66784878-66784897 | None:intergenic | 40.0% | |
| ! | AGCTTTGTGATGACTCCAAA+AGG | - | chr1_2:66785375-66785394 | None:intergenic | 40.0% |
| GATGTTACGTGCCAAAAATC+AGG | + | chr1_2:66785398-66785417 | Msa0086170:CDS | 40.0% | |
| AATGTGTGAGCCGTATTTAC+AGG | + | chr1_2:66785519-66785538 | Msa0086170:intron | 40.0% | |
| ! | TGTAAAGCACTAACTGCAGA+AGG | - | chr1_2:66785568-66785587 | None:intergenic | 40.0% |
| !! | AGCTAAGAGTACCTTATGCT+TGG | - | chr1_2:66785610-66785629 | None:intergenic | 40.0% |
| GCTCTTGATGAGATGAAAAC+TGG | - | chr1_2:66785784-66785803 | None:intergenic | 40.0% | |
| ATAGATCAAAGTCAAGGACG+AGG | + | chr1_2:66785812-66785831 | Msa0086170:CDS | 40.0% | |
| ! | TGTCGATTGCTTACAAAAGC+AGG | + | chr1_2:66785892-66785911 | Msa0086170:intron | 40.0% |
| CTTACAAAAGCAGGCAGAAT+TGG | + | chr1_2:66785901-66785920 | Msa0086170:intron | 40.0% | |
| CTTAGGCTGTTACATTTCAG+TGG | + | chr1_2:66785978-66785997 | Msa0086170:intron | 40.0% | |
| ! | TTTTTCTCCTCATGGATCTG+TGG | + | chr1_2:66786206-66786225 | Msa0086170:CDS | 40.0% |
| AGTGTCCAAGTACTAATGGT+GGG | - | chr1_2:66786423-66786442 | None:intergenic | 40.0% | |
| TGTTATGCTACTATGAGGGT+TGG | - | chr1_2:66786700-66786719 | None:intergenic | 40.0% | |
| TACGAACTTTGTAGGCTTTC+AGG | + | chr1_2:66787046-66787065 | Msa0086170:intron | 40.0% | |
| !!! | CTCTCTGTTTTTGGCTTTAC+CGG | + | chr1_2:66787140-66787159 | Msa0086170:intron | 40.0% |
| AAGGAAAAGGTAGAAGGTTG+AGG | - | chr1_2:66787368-66787387 | None:intergenic | 40.0% | |
| AGAGACTGAATCACCTTGAA+CGG | - | chr1_2:66787473-66787492 | None:intergenic | 40.0% | |
| TCTGTTCTGTAGGGAGATTT+GGG | - | chr1_2:66787580-66787599 | None:intergenic | 40.0% | |
| TTCTGTTCTGTAGGGAGATT+TGG | - | chr1_2:66787581-66787600 | None:intergenic | 40.0% | |
| AATCTCCCTACAGAACAGAA+AGG | + | chr1_2:66787581-66787600 | Msa0086170:CDS | 40.0% | |
| CAAACGAAACATACTTGTGG+AGG | - | chr1_2:66787611-66787630 | None:intergenic | 40.0% | |
| CTCCACAAGTATGTTTCGTT+TGG | + | chr1_2:66787609-66787628 | Msa0086170:intron | 40.0% | |
| AGCCAAACGAAACATACTTG+TGG | - | chr1_2:66787614-66787633 | None:intergenic | 40.0% | |
| ACTTCGCAAAGATCAATGAG+AGG | - | chr1_2:66787693-66787712 | None:intergenic | 40.0% | |
| TCATCTTCTGTGAAACAGCT+TGG | + | chr1_2:66787747-66787766 | Msa0086170:intron | 40.0% | |
| TCTGTGAAACAGCTTGGATA+TGG | + | chr1_2:66787753-66787772 | Msa0086170:intron | 40.0% | |
| TTAAATTTAGCACCTGCCCT+GGG | - | chr1_2:66787816-66787835 | None:intergenic | 40.0% | |
| AATCTGGGTTTGATAGGGAA+AGG | + | chr1_2:66788178-66788197 | Msa0086170:intron | 40.0% | |
| ATCTGGGTTTGATAGGGAAA+GGG | + | chr1_2:66788179-66788198 | Msa0086170:intron | 40.0% | |
| TCATTTGTCCCAGTTATTCC+AGG | - | chr1_2:66788432-66788451 | None:intergenic | 40.0% | |
| ATCTGGATAAGTGCATGATC+TGG | - | chr1_2:66788646-66788665 | None:intergenic | 40.0% | |
| AGATCATGCACTTATCCAGA+TGG | + | chr1_2:66788645-66788664 | Msa0086170:CDS | 40.0% | |
| GATCATGCACTTATCCAGAT+GGG | + | chr1_2:66788646-66788665 | Msa0086170:CDS | 40.0% | |
| GTTGTTTGATAAGCGACTAG+AGG | + | chr1_2:66789410-66789429 | Msa0086170:CDS | 40.0% | |
| TCAGCACCTTGTGTTATGTT+TGG | - | chr1_2:66789453-66789472 | None:intergenic | 40.0% | |
| CATCTTCAGTGATGTCTTGT+GGG | - | chr1_2:66789581-66789600 | None:intergenic | 40.0% | |
| TCATCTTCAGTGATGTCTTG+TGG | - | chr1_2:66789582-66789601 | None:intergenic | 40.0% | |
| GAGATGAATGGGAAGAAACA+AGG | + | chr1_2:66789654-66789673 | Msa0086170:CDS | 40.0% | |
| GAGCATAACAACCGTTACTT+CGG | - | chr1_2:66789825-66789844 | None:intergenic | 40.0% | |
| TGTTATGCTCAGTAGAGACA+AGG | + | chr1_2:66789835-66789854 | Msa0086170:three_prime_UTR | 40.0% | |
| !! | AGGGGTGTAGATTTTGTGAT+TGG | + | chr1_2:66790045-66790064 | Msa0086170:three_prime_UTR | 40.0% |
| GTCTTAGGAATAGAAAGGAC+GGG | + | chr1_2:66790078-66790097 | Msa0086170:three_prime_UTR | 40.0% | |
| TATCATGGCTGAACCTTCCA+AGG | + | chr1_2:66784474-66784493 | Msa0086170:exon | 45.0% | |
| CGAACATGAATGACCTTGGA+AGG | - | chr1_2:66784490-66784509 | None:intergenic | 45.0% | |
| GGAACTTGACATTGACCAAG+AGG | + | chr1_2:66784649-66784668 | Msa0086170:intron | 45.0% | |
| GACCAAGAGGGTGAATGAAA+AGG | + | chr1_2:66784662-66784681 | Msa0086170:intron | 45.0% | |
| ! | ACCCTTTTCATTCACCCTCT+TGG | - | chr1_2:66784667-66784686 | None:intergenic | 45.0% |
| GTGAATGAAAAGGGTAGACC+TGG | + | chr1_2:66784672-66784691 | Msa0086170:intron | 45.0% | |
| ACTTCTAATCAAAGCCGTGC+TGG | + | chr1_2:66784843-66784862 | Msa0086170:intron | 45.0% | |
| CAACGTGTCAATGTCGTGTT+CGG | + | chr1_2:66784929-66784948 | Msa0086170:intron | 45.0% | |
| TCTTCATGTCAGTGCTTCGT+TGG | + | chr1_2:66784996-66785015 | Msa0086170:intron | 45.0% | |
| AGTGAAAGGACAGCACATCT+AGG | - | chr1_2:66785040-66785059 | None:intergenic | 45.0% | |
| TGTGCTGTCCTTTCACTGAA+TGG | + | chr1_2:66785043-66785062 | Msa0086170:intron | 45.0% | |
| TACTCGAGCCATTCAGTGAA+AGG | - | chr1_2:66785054-66785073 | None:intergenic | 45.0% | |
| CAGCTTTCTGTCGACATGAT+TGG | + | chr1_2:66785151-66785170 | Msa0086170:intron | 45.0% | |
| CAGAAGGAACGTCTTGCATT+TGG | - | chr1_2:66785552-66785571 | None:intergenic | 45.0% | |
| ! | AGAGTACCTTATGCTTGGCT+GGG | - | chr1_2:66785605-66785624 | None:intergenic | 45.0% |
| !! | AAGAGTACCTTATGCTTGGC+TGG | - | chr1_2:66785606-66785625 | None:intergenic | 45.0% |
| ATCTTCTCCACAGATCCATG+AGG | - | chr1_2:66786216-66786235 | None:intergenic | 45.0% | |
| GTGACATTTCAGAAGTCAGC+TGG | + | chr1_2:66786237-66786256 | Msa0086170:CDS | 45.0% | |
| !! | CAAGTACTAATGGTGGGTGT+GGG | - | chr1_2:66786417-66786436 | None:intergenic | 45.0% |
| CAGTGTCCAAGTACTAATGG+TGG | - | chr1_2:66786424-66786443 | None:intergenic | 45.0% | |
| ! | GTGGTGTCAATTGGTTCATG+TGG | + | chr1_2:66786674-66786693 | Msa0086170:intron | 45.0% |
| TACTGCAAGAACTGCACTTC+AGG | + | chr1_2:66787103-66787122 | Msa0086170:CDS | 45.0% | |
| TTATGATGGTTGCTGTCAGC+TGG | + | chr1_2:66787230-66787249 | Msa0086170:CDS | 45.0% | |
| !! | CTGTGTATTGGTTTGGCTTG+TGG | + | chr1_2:66787295-66787314 | Msa0086170:intron | 45.0% |
| TGAAGTCTCTGTGAAAGACG+AGG | - | chr1_2:66787553-66787572 | None:intergenic | 45.0% | |
| ! | AGGAAGCATGTATGGTGTTC+AGG | + | chr1_2:66787782-66787801 | Msa0086170:CDS | 45.0% |
| ! | GGAAGCATGTATGGTGTTCA+GGG | + | chr1_2:66787783-66787802 | Msa0086170:CDS | 45.0% |
| ATGTATGGTGTTCAGGGTTC+TGG | + | chr1_2:66787789-66787808 | Msa0086170:CDS | 45.0% | |
| GTTAAATTTAGCACCTGCCC+TGG | - | chr1_2:66787817-66787836 | None:intergenic | 45.0% | |
| TCTGGGTTTGATAGGGAAAG+GGG | + | chr1_2:66788180-66788199 | Msa0086170:intron | 45.0% | |
| GTTTGCCTCCTGGAATAACT+GGG | + | chr1_2:66788421-66788440 | Msa0086170:CDS | 45.0% | |
| TTTGTCCCAGTTATTCCAGG+AGG | - | chr1_2:66788429-66788448 | None:intergenic | 45.0% | |
| AGATGGTTTCCAAGCTGAAC+TGG | + | chr1_2:66788669-66788688 | Msa0086170:CDS | 45.0% | |
| ACTGGCTGTACACTTTCTGA+AGG | + | chr1_2:66788687-66788706 | Msa0086170:CDS | 45.0% | |
| TGAGATTGTGACCCTTCTAG+AGG | + | chr1_2:66789599-66789618 | Msa0086170:CDS | 45.0% | |
| ! | TCAGTTTGAGACTGAGGATC+AGG | + | chr1_2:66789683-66789702 | Msa0086170:CDS | 45.0% |
| GGTAGCATGCTTGCATACAA+GGG | - | chr1_2:66789718-66789737 | None:intergenic | 45.0% | |
| AGGTAGCATGCTTGCATACA+AGG | - | chr1_2:66789719-66789738 | None:intergenic | 45.0% | |
| !! | AATAAATAAATAAAATGAAA+TGG | - | chr1_2:66785482-66785501 | None:intergenic | 5.0% |
| !!! | ATAAATTATTTTCTTAATTT+TGG | + | chr1_2:66788833-66788852 | Msa0086170:intron | 5.0% |
| !!! | AATTTCTTAATTTATTTTAT+TGG | + | chr1_2:66789033-66789052 | Msa0086170:intron | 5.0% |
| !! | AATGATTTAAAAATAAATAA+AGG | - | chr1_2:66790127-66790146 | None:intergenic | 5.0% |
| !! | TGAGAAGCAGGGAAGTACCT+CGG | - | chr1_2:66784533-66784552 | None:intergenic | 50.0% |
| ! | GTAATCACGTGTGTCGGTGT+CGG | - | chr1_2:66784872-66784891 | None:intergenic | 50.0% |
| CGACATTGACACGTTGACAC+CGG | - | chr1_2:66784925-66784944 | None:intergenic | 50.0% | |
| TGTCCATGCCAGTGCTTTGT+AGG | + | chr1_2:66784952-66784971 | Msa0086170:intron | 50.0% | |
| GTCCATGCCAGTGCTTTGTA+GGG | + | chr1_2:66784953-66784972 | Msa0086170:intron | 50.0% | |
| TCCATGCCAGTGCTTTGTAG+GGG | + | chr1_2:66784954-66784973 | Msa0086170:intron | 50.0% | |
| GAAACACCCAGCCAAGCATA+AGG | + | chr1_2:66785596-66785615 | Msa0086170:CDS | 50.0% | |
| AAGTCAAGGACGAGGAGATG+AGG | + | chr1_2:66785820-66785839 | Msa0086170:CDS | 50.0% | |
| CTCAATGCTGTCCTGCTGTT+TGG | + | chr1_2:66786094-66786113 | Msa0086170:intron | 50.0% | |
| CGTGCTCTATCCCATAACAG+TGG | + | chr1_2:66786167-66786186 | Msa0086170:CDS | 50.0% | |
| !! | CCAAGTACTAATGGTGGGTG+TGG | - | chr1_2:66786418-66786437 | None:intergenic | 50.0% |
| CCACACCCACCATTAGTACT+TGG | + | chr1_2:66786415-66786434 | Msa0086170:intron | 50.0% | |
| TCCCTACAGAACAGAAAGGC+AGG | + | chr1_2:66787585-66787604 | Msa0086170:CDS | 50.0% | |
| GCCTGCCTTTCTGTTCTGTA+GGG | - | chr1_2:66787589-66787608 | None:intergenic | 50.0% | |
| ! | CAGCTTGGATATGGTGATGC+AGG | + | chr1_2:66787762-66787781 | Msa0086170:intron | 50.0% |
| ! | GGTGATGCAGGAAGCATGTA+TGG | + | chr1_2:66787774-66787793 | Msa0086170:CDS | 50.0% |
| CTGGAAGGAGGGGGAAAAAA+CGG | - | chr1_2:66787900-66787919 | None:intergenic | 50.0% | |
| ! | TTTTTCCCCCTCCTTCCAGT+CGG | + | chr1_2:66787901-66787920 | Msa0086170:intron | 50.0% |
| TGGATATCCGACTGGAAGGA+GGG | - | chr1_2:66787911-66787930 | None:intergenic | 50.0% | |
| CTGGGTTTGATAGGGAAAGG+GGG | + | chr1_2:66788181-66788200 | Msa0086170:intron | 50.0% | |
| TGGGTTTGATAGGGAAAGGG+GGG | + | chr1_2:66788182-66788201 | Msa0086170:intron | 50.0% | |
| ACTGTAGATGCCCAATGCTG+CGG | + | chr1_2:66788374-66788393 | Msa0086170:intron | 50.0% | |
| GGTTTGCCTCCTGGAATAAC+TGG | + | chr1_2:66788420-66788439 | Msa0086170:CDS | 50.0% | |
| GCACTTATCCAGATGGGAGA+TGG | + | chr1_2:66788652-66788671 | Msa0086170:CDS | 50.0% | |
| CTTGGAAACCATCTCCCATC+TGG | - | chr1_2:66788663-66788682 | None:intergenic | 50.0% | |
| AGTGTACAGCCAGTTCAGCT+TGG | - | chr1_2:66788681-66788700 | None:intergenic | 50.0% | |
| AGTGATGTCTTGTGGGAGTG+TGG | - | chr1_2:66789574-66789593 | None:intergenic | 50.0% | |
| ! | GGTTCCATGCTCCTCTAGAA+GGG | - | chr1_2:66789613-66789632 | None:intergenic | 50.0% |
| TGGTTCCATGCTCCTCTAGA+AGG | - | chr1_2:66789614-66789633 | None:intergenic | 50.0% | |
| GAATGGGAAGAAACAAGGCC+TGG | + | chr1_2:66789659-66789678 | Msa0086170:CDS | 50.0% | |
| CCTCAGTCTCAAACTGAACC+AGG | - | chr1_2:66789680-66789699 | None:intergenic | 50.0% | |
| ! | CCTGGTTCAGTTTGAGACTG+AGG | + | chr1_2:66789677-66789696 | Msa0086170:CDS | 50.0% |
| AAGCATGCTACCTCGCTTTC+TGG | + | chr1_2:66789726-66789745 | Msa0086170:CDS | 50.0% | |
| AATTACCGAGCCAGAAAGCG+AGG | - | chr1_2:66789739-66789758 | None:intergenic | 50.0% | |
| !! | CGCTTTCTGGCTCGGTAATT+CGG | + | chr1_2:66789739-66789758 | Msa0086170:CDS | 50.0% |
| ACCGTTACTTCGGTTGTCCA+CGG | - | chr1_2:66789815-66789834 | None:intergenic | 50.0% | |
| TGTGGGGCACGAAATATCCG+AGG | + | chr1_2:66784513-66784532 | Msa0086170:CDS | 55.0% | |
| !! | ACCCCTACAAAGCACTGGCA+TGG | - | chr1_2:66784958-66784977 | None:intergenic | 55.0% |
| CACACACCCCTACAAAGCAC+TGG | - | chr1_2:66784963-66784982 | None:intergenic | 55.0% | |
| CAAGGACGAGGAGATGAGGT+TGG | + | chr1_2:66785824-66785843 | Msa0086170:intron | 55.0% | |
| ! | TCCTGCTGTTTGGAACCCTC+TGG | + | chr1_2:66786104-66786123 | Msa0086170:intron | 55.0% |
| TCCAGAGGGTTCCAAACAGC+AGG | - | chr1_2:66786108-66786127 | None:intergenic | 55.0% | |
| GGTTTGGCTGTGCATCCAGA+GGG | - | chr1_2:66786122-66786141 | None:intergenic | 55.0% | |
| ATGAGCATGGGTGTGGGTGT+GGG | - | chr1_2:66786389-66786408 | None:intergenic | 55.0% | |
| GAGTGCATGAGCATGGGTGT+GGG | - | chr1_2:66786395-66786414 | None:intergenic | 55.0% | |
| ! | GTGTGGGAGTGCATGAGCAT+GGG | - | chr1_2:66786401-66786420 | None:intergenic | 55.0% |
| GGCCTGCCTTTCTGTTCTGT+AGG | - | chr1_2:66787590-66787609 | None:intergenic | 55.0% | |
| !! | TGTTCAGGGTTCTGGACCCA+GGG | + | chr1_2:66787797-66787816 | Msa0086170:CDS | 55.0% |
| GATATCCGACTGGAAGGAGG+GGG | - | chr1_2:66787909-66787928 | None:intergenic | 55.0% | |
| GGATATCCGACTGGAAGGAG+GGG | - | chr1_2:66787910-66787929 | None:intergenic | 55.0% | |
| GTGGATATCCGACTGGAAGG+AGG | - | chr1_2:66787912-66787931 | None:intergenic | 55.0% | |
| CCTGTGGATATCCGACTGGA+AGG | - | chr1_2:66787915-66787934 | None:intergenic | 55.0% | |
| CCTTCCAGTCGGATATCCAC+AGG | + | chr1_2:66787912-66787931 | Msa0086170:intron | 55.0% | |
| CTCACCTGTGGATATCCGAC+TGG | - | chr1_2:66787919-66787938 | None:intergenic | 55.0% | |
| !!! | CGGCCATTGCAGCTGCTTTT+GGG | + | chr1_2:66788394-66788413 | Msa0086170:CDS | 55.0% |
| !!! | GGCCATTGCAGCTGCTTTTG+GGG | + | chr1_2:66788395-66788414 | Msa0086170:CDS | 55.0% |
| !!! | GCCATTGCAGCTGCTTTTGG+GGG | + | chr1_2:66788396-66788415 | Msa0086170:CDS | 55.0% |
| TCCCCCAAAAGCAGCTGCAA+TGG | - | chr1_2:66788400-66788419 | None:intergenic | 55.0% | |
| !!! | ATTGCAGCTGCTTTTGGGGG+AGG | + | chr1_2:66788399-66788418 | Msa0086170:CDS | 55.0% |
| TCGTTGGGGAGCAGCAATAG+CGG | - | chr1_2:66789536-66789555 | None:intergenic | 55.0% | |
| ! | GTGACCCTTCTAGAGGAGCA+TGG | + | chr1_2:66789606-66789625 | Msa0086170:CDS | 55.0% |
| !! | TGCTACCTCGCTTTCTGGCT+CGG | + | chr1_2:66789731-66789750 | Msa0086170:CDS | 55.0% |
| CCGTTACTTCGGTTGTCCAC+GGG | - | chr1_2:66789814-66789833 | None:intergenic | 55.0% | |
| CCCGTGGACAACCGAAGTAA+CGG | + | chr1_2:66789811-66789830 | Msa0086170:three_prime_UTR | 55.0% | |
| ! | CGGTTTGGCTGTGCATCCAG+AGG | - | chr1_2:66786123-66786142 | None:intergenic | 60.0% |
| CATGAGCATGGGTGTGGGTG+TGG | - | chr1_2:66786390-66786409 | None:intergenic | 60.0% | |
| GGAGTGCATGAGCATGGGTG+TGG | - | chr1_2:66786396-66786415 | None:intergenic | 60.0% | |
| ! | GGTGTGGGAGTGCATGAGCA+TGG | - | chr1_2:66786402-66786421 | None:intergenic | 60.0% |
| !! | GTGTTCAGGGTTCTGGACCC+AGG | + | chr1_2:66787796-66787815 | Msa0086170:CDS | 60.0% |
| GCTGCAATGGCCGCAGCATT+GGG | - | chr1_2:66788387-66788406 | None:intergenic | 60.0% | |
| AGCTGCAATGGCCGCAGCAT+TGG | - | chr1_2:66788388-66788407 | None:intergenic | 60.0% | |
| !! | GCGGCCATTGCAGCTGCTTT+TGG | + | chr1_2:66788393-66788412 | Msa0086170:CDS | 60.0% |
| TTTGGGGGAGGTTTGCCTCC+TGG | + | chr1_2:66788411-66788430 | Msa0086170:CDS | 60.0% | |
| !! | GTCGGTGTCGGACACCAGCA+CGG | - | chr1_2:66784860-66784879 | None:intergenic | 65.0% |
| !! | CAGGGTTCTGGACCCAGGGC+AGG | + | chr1_2:66787801-66787820 | Msa0086170:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 66783999 | 66790224 | 66783999 | ID=Msa0086170;Name=Msa0086170 |
| chr1_2 | mRNA | 66783999 | 66790224 | 66783999 | ID=Msa0086170-mRNA-1;Parent=Msa0086170;Name=Msa0086170-mRNA-1;_AED=0.17;_eAED=0.17;_QI=157|1|1|1|0.92|0.86|15|433|443 |
| chr1_2 | exon | 66783999 | 66784144 | 66783999 | ID=Msa0086170-mRNA-1:exon:22555;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66784467 | 66784534 | 66784467 | ID=Msa0086170-mRNA-1:exon:22556;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66785348 | 66785419 | 66785348 | ID=Msa0086170-mRNA-1:exon:22557;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66785541 | 66785617 | 66785541 | ID=Msa0086170-mRNA-1:exon:22558;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66785763 | 66785841 | 66785763 | ID=Msa0086170-mRNA-1:exon:22559;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66786135 | 66786258 | 66786135 | ID=Msa0086170-mRNA-1:exon:22560;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66787060 | 66787124 | 66787060 | ID=Msa0086170-mRNA-1:exon:22561;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66787219 | 66787268 | 66787219 | ID=Msa0086170-mRNA-1:exon:22562;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66787437 | 66787478 | 66787437 | ID=Msa0086170-mRNA-1:exon:22563;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66787565 | 66787616 | 66787565 | ID=Msa0086170-mRNA-1:exon:22564;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66787765 | 66787822 | 66787765 | ID=Msa0086170-mRNA-1:exon:22565;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66787920 | 66787933 | 66787920 | ID=Msa0086170-mRNA-1:exon:22566;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66788381 | 66788488 | 66788381 | ID=Msa0086170-mRNA-1:exon:22567;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66788565 | 66788708 | 66788565 | ID=Msa0086170-mRNA-1:exon:22568;Parent=Msa0086170-mRNA-1 |
| chr1_2 | exon | 66789402 | 66790224 | 66789402 | ID=Msa0086170-mRNA-1:exon:22569;Parent=Msa0086170-mRNA-1 |
| chr1_2 | five_prime_UTR | 66783999 | 66784144 | 66783999 | ID=Msa0086170-mRNA-1:five_prime_utr;Parent=Msa0086170-mRNA-1 |
| chr1_2 | five_prime_UTR | 66784467 | 66784477 | 66784467 | ID=Msa0086170-mRNA-1:five_prime_utr;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66784478 | 66784534 | 66784478 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66785348 | 66785419 | 66785348 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66785541 | 66785617 | 66785541 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66785763 | 66785841 | 66785763 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66786135 | 66786258 | 66786135 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66787060 | 66787124 | 66787060 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66787219 | 66787268 | 66787219 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66787437 | 66787478 | 66787437 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66787565 | 66787616 | 66787565 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66787765 | 66787822 | 66787765 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66787920 | 66787933 | 66787920 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66788381 | 66788488 | 66788381 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66788565 | 66788708 | 66788565 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | CDS | 66789402 | 66789791 | 66789402 | ID=Msa0086170-mRNA-1:cds;Parent=Msa0086170-mRNA-1 |
| chr1_2 | three_prime_UTR | 66789792 | 66790224 | 66789792 | ID=Msa0086170-mRNA-1:three_prime_utr;Parent=Msa0086170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
