Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090330 | KEH44229.1 | 88.770 | 187 | 21 | 0 | 15 | 201 | 831 | 1017 | 1.27e-106 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090330 | A0A072VQD5 | 88.770 | 187 | 21 | 0 | 15 | 201 | 831 | 1017 | 6.07e-107 | 340 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032090 | Msa0090330 | 0.816893 | 4.373434e-52 | -8.615850e-47 |
| Msa0032430 | Msa0090330 | 0.829207 | 5.855678e-55 | -8.615850e-47 |
| Msa0054480 | Msa0090330 | 0.805725 | 1.161852e-49 | -8.615850e-47 |
| Msa0061290 | Msa0090330 | 0.803660 | 3.134770e-49 | -8.615850e-47 |
| Msa0079380 | Msa0090330 | 0.823279 | 1.509014e-53 | -8.615850e-47 |
| Msa0090330 | Msa0137650 | 0.938849 | 3.400927e-99 | -8.615850e-47 |
| Msa0090330 | Msa0172070 | 0.824967 | 6.058335e-54 | -8.615850e-47 |
| Msa0090330 | Msa0182730 | 0.906975 | 8.347195e-81 | -8.615850e-47 |
| Msa0090330 | Msa0292400 | 0.810433 | 1.155316e-50 | -8.615850e-47 |
| Msa0090330 | Msa0344040 | 0.814401 | 1.570011e-51 | -8.615850e-47 |
| Msa0090330 | Msa0402650 | 0.808331 | 3.263919e-50 | -8.615850e-47 |
| Msa0090330 | Msa0465410 | 0.830754 | 2.457485e-55 | -8.615850e-47 |
| Msa0090330 | Msa0501460 | 0.804629 | 1.970769e-49 | -8.615850e-47 |
| Msa0090330 | Msa0511270 | 0.827426 | 1.574644e-54 | -8.615850e-47 |
| Msa0090330 | Msa0511370 | 0.804598 | 2.000204e-49 | -8.615850e-47 |
| Msa0090330 | Msa0585560 | 0.807055 | 6.093909e-50 | -8.615850e-47 |
| Msa0090330 | Msa0625720 | 0.804957 | 1.683475e-49 | -8.615850e-47 |
| Msa0090330 | Msa0682330 | 0.800856 | 1.184325e-48 | -8.615850e-47 |
| Msa0090330 | Msa0691980 | 0.812927 | 3.313160e-51 | -8.615850e-47 |
| Msa0090330 | Msa0919770 | 0.804276 | 2.334720e-49 | -8.615850e-47 |
| Msa0090330 | Msa1171710 | 0.824630 | 7.273177e-54 | -8.615850e-47 |
| Msa0090330 | Msa1209460 | 0.834746 | 2.508227e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090330 | MtrunA17_Chr1g0209941 | 83.465 | 127 | 14 | 1 | 75 | 201 | 1 | 120 | 4.62e-64 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 282 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCTTCTTTACTCTTAT+TGG | 0.053181 | 1_2:+72294498 | None:intergenic |
| GAAATTGTTTGGTATGATTT+TGG | 0.159030 | 1_2:-72296512 | Msa0090330:five_prime_UTR |
| TGATGAAATATTTGCTAAAT+TGG | 0.179015 | 1_2:-72294676 | Msa0090330:five_prime_UTR |
| CCTCAGCAACAACTGGAAAT+TGG | 0.184680 | 1_2:+72294056 | None:intergenic |
| CCTTTGTTGCTTAAATTAAA+AGG | 0.212454 | 1_2:-72298852 | Msa0090330:intron |
| ACAATGAAGAATGCAATTTA+AGG | 0.220163 | 1_2:-72297751 | Msa0090330:intron |
| AAAACGAAGACAGAAGAAAT+AGG | 0.228648 | 1_2:-72294175 | Msa0090330:CDS |
| TATTCCAACTCTCGTCGTTT+TGG | 0.232076 | 1_2:-72296850 | Msa0090330:five_prime_UTR |
| CTGCTTGAGTGTTTCCAAAA+AGG | 0.232278 | 1_2:-72293345 | Msa0090330:intron |
| CACACCCACTTGATCAAGTT+TGG | 0.234638 | 1_2:-72296916 | Msa0090330:five_prime_UTR |
| GAGAAACTTGCTGTGGCTTT+TGG | 0.240781 | 1_2:-72294546 | Msa0090330:five_prime_UTR |
| TGCAATGGGGTTGAAGGATT+TGG | 0.244184 | 1_2:-72296038 | Msa0090330:five_prime_UTR |
| TGCTTCTCTCTCGTTCTCTT+TGG | 0.247180 | 1_2:-72299466 | Msa0090330:five_prime_UTR |
| CATGTCCATGCCATTAAGTT+TGG | 0.256068 | 1_2:-72295395 | Msa0090330:five_prime_UTR |
| CACCCCATCTTGTTGGAATA+TGG | 0.256817 | 1_2:-72293492 | Msa0090330:CDS |
| GCAATGGGGTTGAAGGATTT+GGG | 0.266842 | 1_2:-72296037 | Msa0090330:five_prime_UTR |
| TCTGCAACTCAATTCCTCTT+TGG | 0.273641 | 1_2:-72299420 | Msa0090330:five_prime_UTR |
| ATATCTCGCTACGTGCAAAA+TGG | 0.279057 | 1_2:-72296763 | Msa0090330:five_prime_UTR |
| AGCAGTTCTGTTGTCCCTTT+AGG | 0.279145 | 1_2:-72293989 | Msa0090330:CDS |
| GTTTCATAAAGAAGCGTTAT+TGG | 0.283877 | 1_2:-72296740 | Msa0090330:five_prime_UTR |
| TTCACCCAGACACTGTTTCT+TGG | 0.285630 | 1_2:-72296189 | Msa0090330:five_prime_UTR |
| GAAACAATGGAGGAAAAGTT+TGG | 0.289969 | 1_2:-72295089 | Msa0090330:five_prime_UTR |
| AACAGTCTGCTTGACACTTA+TGG | 0.294021 | 1_2:-72295650 | Msa0090330:five_prime_UTR |
| GACCAAGAAACAACCGTTCT+TGG | 0.296022 | 1_2:+72296793 | None:intergenic |
| AACCAAGAACGGTTGTTTCT+TGG | 0.296522 | 1_2:-72296795 | Msa0090330:five_prime_UTR |
| AACATGATCCATCTTTAAAA+TGG | 0.299277 | 1_2:+72294385 | None:intergenic |
| TGAAGCCGATGGATCCGTTT+GGG | 0.305365 | 1_2:-72294967 | Msa0090330:five_prime_UTR |
| CCCCTTTCACCCCATCTTGT+TGG | 0.313908 | 1_2:-72293499 | Msa0090330:CDS |
| GATTAAGAAAGATTTGAATA+TGG | 0.314408 | 1_2:-72296644 | Msa0090330:five_prime_UTR |
| TTGTTGTCAGAGATATTAAT+AGG | 0.322395 | 1_2:-72294413 | Msa0090330:five_prime_UTR |
| CTAGAATCACGGCTTTCTTT+TGG | 0.323740 | 1_2:-72293379 | Msa0090330:CDS |
| TGAATAAATTCCACATTTGA+TGG | 0.325412 | 1_2:+72295688 | None:intergenic |
| AATGAAGCTTGGACATGGTT+TGG | 0.336736 | 1_2:-72296296 | Msa0090330:five_prime_UTR |
| TTACATAACCTCAAACCTTC+GGG | 0.337812 | 1_2:-72298081 | Msa0090330:five_prime_UTR |
| CACTGATTTGCTTCCATTGT+TGG | 0.341092 | 1_2:+72298127 | None:intergenic |
| ATTAAGAAAGATTTGAATAT+GGG | 0.342573 | 1_2:-72296643 | Msa0090330:five_prime_UTR |
| TCAAGCAAAATGCGATTTGC+AGG | 0.343043 | 1_2:+72299390 | None:intergenic |
| AGACATAAATCCAAACTTAA+TGG | 0.344040 | 1_2:+72295385 | None:intergenic |
| CATGTTCCTGTGGTGATTAT+TGG | 0.347157 | 1_2:-72294368 | Msa0090330:five_prime_UTR |
| ACCTCAATCCAACTCATTCC+AGG | 0.350883 | 1_2:+72294750 | None:intergenic |
| TAACTTATTGCAAGTCTAAC+AGG | 0.353344 | 1_2:+72297816 | None:intergenic |
| TCTTCATGAGTATAATGATT+TGG | 0.356057 | 1_2:-72296143 | Msa0090330:five_prime_UTR |
| CATGCCATGACTGTGGTCTC+AGG | 0.370654 | 1_2:-72296610 | Msa0090330:five_prime_UTR |
| GAAAGGATCTTCATGGGAAT+TGG | 0.372555 | 1_2:-72298453 | Msa0090330:five_prime_UTR |
| ATTGATCTCCTTGGAAGATC+AGG | 0.375292 | 1_2:-72295032 | Msa0090330:five_prime_UTR |
| CATATTAACAAGAGAATTGC+TGG | 0.375329 | 1_2:+72295352 | None:intergenic |
| AGAGCGCACTTGGGAAGATT+TGG | 0.379516 | 1_2:-72295588 | Msa0090330:five_prime_UTR |
| TCTTGGAATGCAATTATTGC+TGG | 0.379891 | 1_2:-72296172 | Msa0090330:five_prime_UTR |
| GAACACTGACTAATGTAATA+TGG | 0.381231 | 1_2:+72295162 | None:intergenic |
| CTCAGCAACAACTGGAAATT+GGG | 0.383215 | 1_2:+72294057 | None:intergenic |
| AGTGATTCTAAGAAATTGTT+TGG | 0.385080 | 1_2:-72296523 | Msa0090330:five_prime_UTR |
| TACAATCAAATTGTAAGAAT+CGG | 0.385838 | 1_2:+72294296 | None:intergenic |
| ATTGAAAGGCTGTACTCATT+AGG | 0.395146 | 1_2:+72296382 | None:intergenic |
| GAATGCCTGTGCTGGATTGC+GGG | 0.396818 | 1_2:-72296353 | Msa0090330:five_prime_UTR |
| ACAAAAGACCATATTATTGC+AGG | 0.398801 | 1_2:-72295884 | Msa0090330:five_prime_UTR |
| AGGATACACACTTTCATTGT+TGG | 0.399628 | 1_2:-72294720 | Msa0090330:five_prime_UTR |
| ATCACTAAACTGCCCGCATT+TGG | 0.407741 | 1_2:+72296540 | None:intergenic |
| AGTGGAGCAATGGATGGATT+TGG | 0.411220 | 1_2:-72293424 | Msa0090330:CDS |
| CAACAATCCTCAGCAACAAC+TGG | 0.411545 | 1_2:+72294049 | None:intergenic |
| CTAGACCACACTGTCTCTTC+AGG | 0.411696 | 1_2:-72293739 | Msa0090330:CDS |
| TTGAAGCCGATGGATCCGTT+TGG | 0.411782 | 1_2:-72294968 | Msa0090330:five_prime_UTR |
| CTTACATAACCTCAAACCTT+CGG | 0.415521 | 1_2:-72298082 | Msa0090330:five_prime_UTR |
| TCAGATTTGTTTGTGGCTGT+TGG | 0.418288 | 1_2:-72295974 | Msa0090330:five_prime_UTR |
| GAGCATTCCCTGCAATAATA+TGG | 0.419942 | 1_2:+72295876 | None:intergenic |
| GAACTGTTGACAAAGTAGTT+TGG | 0.423029 | 1_2:+72295768 | None:intergenic |
| AAATGCTTGCGCAAACTTGT+CGG | 0.423180 | 1_2:-72295441 | Msa0090330:five_prime_UTR |
| GTCTCATGGTCTGCAATGAT+TGG | 0.425040 | 1_2:-72295263 | Msa0090330:five_prime_UTR |
| TCGTATCTAAGCTTGTTTCA+AGG | 0.426541 | 1_2:-72294440 | Msa0090330:five_prime_UTR |
| TTTACTCTTATTGGAGCTCC+AGG | 0.432088 | 1_2:+72294507 | None:intergenic |
| GAGGATATATAAATTTCATA+AGG | 0.433257 | 1_2:-72297864 | Msa0090330:five_prime_UTR |
| TGGAATAGAGTGTTAACAAA+TGG | 0.434311 | 1_2:+72296866 | None:intergenic |
| GCATTCCAAGAAACAGTGTC+TGG | 0.436629 | 1_2:+72296184 | None:intergenic |
| GCAAACATTTATGCATCAGC+AGG | 0.441495 | 1_2:-72294834 | Msa0090330:five_prime_UTR |
| AGGACCTTCCTTGGAATGAA+TGG | 0.441918 | 1_2:-72298424 | Msa0090330:five_prime_UTR |
| GCAGGGAATGCTCTGATCTC+TGG | 0.442082 | 1_2:-72295866 | Msa0090330:five_prime_UTR |
| TGGAGGCAGTGATCGTTACT+TGG | 0.442196 | 1_2:-72294012 | Msa0090330:CDS |
| AAACGAAGACAGAAGAAATA+GGG | 0.442559 | 1_2:-72294174 | Msa0090330:CDS |
| TCCAACAAGATGGGGTGAAA+GGG | 0.445337 | 1_2:+72293498 | None:intergenic |
| TGGAGGCCAAGGACCTTCCT+TGG | 0.446102 | 1_2:-72298433 | Msa0090330:five_prime_UTR |
| TCCATTCCATTTGAAGCCGA+TGG | 0.450012 | 1_2:-72294978 | Msa0090330:five_prime_UTR |
| TGAAAGTGTGGGGTGCTGGC+TGG | 0.451697 | 1_2:-72297792 | Msa0090330:five_prime_UTR |
| GGATTAATTGCCACACCACC+TGG | 0.452327 | 1_2:-72294525 | Msa0090330:five_prime_UTR |
| TACTTTGATTTGCTGCAAGC+TGG | 0.454622 | 1_2:+72295733 | None:intergenic |
| TATCTCGCTACGTGCAAAAT+GGG | 0.455651 | 1_2:-72296762 | Msa0090330:five_prime_UTR |
| GCTTGCATGATTGATCTCCT+TGG | 0.457453 | 1_2:-72295041 | Msa0090330:five_prime_UTR |
| ACTCTAGAGCCAGACAAATC+TGG | 0.461867 | 1_2:-72294873 | Msa0090330:five_prime_UTR |
| TTACTGAAAGTGTGGGGTGC+TGG | 0.461907 | 1_2:-72297796 | Msa0090330:five_prime_UTR |
| AGCGAACTTCTAAGTAAAGC+TGG | 0.463323 | 1_2:-72294645 | Msa0090330:five_prime_UTR |
| ATTATATTGAATGCCTGTGC+TGG | 0.463541 | 1_2:-72296361 | Msa0090330:five_prime_UTR |
| TAAAGACGGAGTCAAGATAA+TGG | 0.465555 | 1_2:-72296944 | Msa0090330:five_prime_UTR |
| AAACTGTTGATTTGTTTAAA+CGG | 0.466103 | 1_2:-72296426 | Msa0090330:five_prime_UTR |
| ACGGATCCATCGGCTTCAAA+TGG | 0.467501 | 1_2:+72294972 | None:intergenic |
| AAATATTCGAAGAGCGCACT+TGG | 0.471695 | 1_2:-72295598 | Msa0090330:five_prime_UTR |
| GTTCAGTACTTTGATCAAGC+AGG | 0.472009 | 1_2:+72296815 | None:intergenic |
| TACTTTGATCAAGCAGGTTG+CGG | 0.472754 | 1_2:+72296821 | None:intergenic |
| TTGTTTAAACGGATGGTTGA+GGG | 0.473325 | 1_2:-72296415 | Msa0090330:five_prime_UTR |
| GAAATAGGGAAAGAAGAGAA+AGG | 0.474091 | 1_2:-72294160 | Msa0090330:CDS |
| GAGACAGTGTGGTCTAGATA+TGG | 0.474957 | 1_2:+72293745 | None:intergenic |
| TGGAGCCAGGCGTTGTTTCG+TGG | 0.475151 | 1_2:-72296492 | Msa0090330:five_prime_UTR |
| CATGTCCAAGCTTCATTAGA+AGG | 0.475709 | 1_2:+72296302 | None:intergenic |
| CTTGATAAGGTGAACACATT+GGG | 0.475987 | 1_2:+72296079 | None:intergenic |
| GAACATGCTTTAAGAACAGT+TGG | 0.477832 | 1_2:+72296667 | None:intergenic |
| ATGTATATCAGTCTCTATGA+TGG | 0.481431 | 1_2:+72294614 | None:intergenic |
| TAGTGATTCAGATTTGTTTG+TGG | 0.482004 | 1_2:-72295981 | Msa0090330:five_prime_UTR |
| AAATGTTGCCAATGTTAGAA+AGG | 0.482771 | 1_2:-72294802 | Msa0090330:five_prime_UTR |
| GTCTGCAATGATTGGAGGGT+TGG | 0.485630 | 1_2:-72295255 | Msa0090330:five_prime_UTR |
| GGTATCGGAAGGACGGTTCA+TGG | 0.486575 | 1_2:-72296325 | Msa0090330:five_prime_UTR |
| TTAAAAGCATGTGCTGCAAT+GGG | 0.487186 | 1_2:-72296052 | Msa0090330:five_prime_UTR |
| CTTGTTGGAATATGGTCATA+TGG | 0.487680 | 1_2:-72293484 | Msa0090330:CDS |
| CTTAGATACGAATTTGAGAA+AGG | 0.489160 | 1_2:+72294452 | None:intergenic |
| CATGGCCTTCTAATGAAGCT+TGG | 0.489284 | 1_2:-72296307 | Msa0090330:five_prime_UTR |
| ATAAATATTAGAGCAATTGA+AGG | 0.489916 | 1_2:-72298900 | Msa0090330:five_prime_UTR |
| GCGCACTTGGGAAGATTTGG+TGG | 0.491491 | 1_2:-72295585 | Msa0090330:five_prime_UTR |
| TTGCATAACCTTTCTAACAT+TGG | 0.492563 | 1_2:+72294794 | None:intergenic |
| GAGACAGATACATTCTTGTT+CGG | 0.494040 | 1_2:-72296014 | Msa0090330:five_prime_UTR |
| CCAATTTCCAGTTGTTGCTG+AGG | 0.494374 | 1_2:-72294056 | Msa0090330:CDS |
| TAATGTGGAACGAAGTGAAA+AGG | 0.497503 | 1_2:-72294592 | Msa0090330:five_prime_UTR |
| GCAAAACAGCAATGTGAAGA+AGG | 0.498121 | 1_2:-72294775 | Msa0090330:five_prime_UTR |
| TTTATGCATCAGCAGGGATG+TGG | 0.499174 | 1_2:-72294827 | Msa0090330:five_prime_UTR |
| AACGGAAAGGCCAGTGAGGT+TGG | 0.500543 | 1_2:+72294095 | None:intergenic |
| GTCGCTCAGAGGCTCCTAAA+GGG | 0.500616 | 1_2:+72293975 | None:intergenic |
| CGTCGCTCAGAGGCTCCTAA+AGG | 0.502994 | 1_2:+72293974 | None:intergenic |
| CTTAAAAGCATGTGCTGCAA+TGG | 0.503163 | 1_2:-72296053 | Msa0090330:five_prime_UTR |
| GTTGTCGTGATGGAGGGATA+TGG | 0.505701 | 1_2:+72294122 | None:intergenic |
| AAGAAAGCCGTGATTCTAGT+AGG | 0.506428 | 1_2:+72293383 | None:intergenic |
| TTCCAACAAGATGGGGTGAA+AGG | 0.506709 | 1_2:+72293497 | None:intergenic |
| AGGTGGAGAAAGGATCTTCA+TGG | 0.506801 | 1_2:-72298460 | Msa0090330:five_prime_UTR |
| AAATTTCATAAGGTCAGATC+AGG | 0.508918 | 1_2:-72297854 | Msa0090330:five_prime_UTR |
| GAACTGCAGACAAACGGATC+AGG | 0.509296 | 1_2:+72295470 | None:intergenic |
| ATGCCATGACTGTGGTCTCA+GGG | 0.510107 | 1_2:-72296609 | Msa0090330:five_prime_UTR |
| TTCATTCCAAGGAAGGTCCT+TGG | 0.511155 | 1_2:+72298427 | None:intergenic |
| CGCAGAAGTGGAGCAATGGA+TGG | 0.515967 | 1_2:-72293430 | Msa0090330:CDS |
| GAAGCCGATGGATCCGTTTG+GGG | 0.516651 | 1_2:-72294966 | Msa0090330:five_prime_UTR |
| TGCATGTAATCACGCTGGTT+TGG | 0.517552 | 1_2:-72295135 | Msa0090330:five_prime_UTR |
| GTTGATATGTATGCAAAAGC+AGG | 0.517629 | 1_2:-72296250 | Msa0090330:five_prime_UTR |
| TCATGGTCTGCAATGATTGG+AGG | 0.518200 | 1_2:-72295260 | Msa0090330:five_prime_UTR |
| GTATTCCAAGTGTGAGATGA+TGG | 0.518907 | 1_2:-72295939 | Msa0090330:five_prime_UTR |
| CTGACTAATGTAATATGGTT+TGG | 0.522888 | 1_2:+72295167 | None:intergenic |
| TCACGCTGGTTTGGTAAATG+AGG | 0.522992 | 1_2:-72295126 | Msa0090330:five_prime_UTR |
| TCTCTGTGGTATCTCGGAAA+AGG | 0.524042 | 1_2:+72295292 | None:intergenic |
| TATACCTCTCTGTGGTATCT+CGG | 0.526369 | 1_2:+72295286 | None:intergenic |
| CTTCTAATGAAGCTTGGACA+TGG | 0.527370 | 1_2:-72296301 | Msa0090330:five_prime_UTR |
| GTCAACAGTTCTTAAATCTG+TGG | 0.528124 | 1_2:-72295756 | Msa0090330:five_prime_UTR |
| TTAGTTTCCCTGATCTTCCA+AGG | 0.529601 | 1_2:+72295024 | None:intergenic |
| TGACCATATTCCAACAAGAT+GGG | 0.529628 | 1_2:+72293489 | None:intergenic |
| ATGTGCTGCAATGGGGTTGA+AGG | 0.530595 | 1_2:-72296044 | Msa0090330:five_prime_UTR |
| AAAAGAGAACTGCAGACAAA+CGG | 0.531240 | 1_2:+72295464 | None:intergenic |
| ATGACCATATTCCAACAAGA+TGG | 0.532140 | 1_2:+72293488 | None:intergenic |
| TTCATGGGAATTGGAGGCCA+AGG | 0.532357 | 1_2:-72298444 | Msa0090330:five_prime_UTR |
| CCTCTAAAACTGAAGAATGC+AGG | 0.535353 | 1_2:+72297883 | None:intergenic |
| TGTTGATTTGTTTAAACGGA+TGG | 0.536925 | 1_2:-72296422 | Msa0090330:five_prime_UTR |
| GTTTCTGAGACTTGAGTGGC+GGG | 0.537248 | 1_2:+72296888 | None:intergenic |
| GCAATAAGTTACTGAAAGTG+TGG | 0.537521 | 1_2:-72297804 | Msa0090330:five_prime_UTR |
| CACGCTGGTTTGGTAAATGA+GGG | 0.540302 | 1_2:-72295125 | Msa0090330:five_prime_UTR |
| ACAAGAGTACCAGATTTGTC+TGG | 0.542059 | 1_2:+72294864 | None:intergenic |
| CAAGCATAGTGCTCTTGTGT+TGG | 0.542768 | 1_2:+72295059 | None:intergenic |
| AAGCCGATGGATCCGTTTGG+GGG | 0.542910 | 1_2:-72294965 | Msa0090330:five_prime_UTR |
| CAAGCAAAATGCGATTTGCA+GGG | 0.542990 | 1_2:+72299391 | None:intergenic |
| GCATTCCACGAAACAACGCC+TGG | 0.543071 | 1_2:+72296487 | None:intergenic |
| GGATTGCGGGATGGAGGTAT+CGG | 0.543236 | 1_2:-72296340 | Msa0090330:five_prime_UTR |
| TTTAATGAGATGTGTACGTT+GGG | 0.543473 | 1_2:-72296715 | Msa0090330:five_prime_UTR |
| TAAATCCAAACTTAATGGCA+TGG | 0.545036 | 1_2:+72295390 | None:intergenic |
| AGGATCTTCATGGGAATTGG+AGG | 0.546530 | 1_2:-72298450 | Msa0090330:five_prime_UTR |
| TGGATATGTTGTCGTGATGG+AGG | 0.546608 | 1_2:+72294115 | None:intergenic |
| GAAAGAAGAGATCGCAGAAG+TGG | 0.546679 | 1_2:-72293442 | Msa0090330:CDS |
| CAAACTTGATCAAGTGGGTG+TGG | 0.547369 | 1_2:+72296917 | None:intergenic |
| GATTTGAATGAGGTGGAGAA+AGG | 0.548180 | 1_2:-72298470 | Msa0090330:five_prime_UTR |
| ACCTGGAATGAGTTGGATTG+AGG | 0.550748 | 1_2:-72294751 | Msa0090330:five_prime_UTR |
| TCCATCCCGCAATCCAGCAC+AGG | 0.551224 | 1_2:+72296348 | None:intergenic |
| AAAATCCAAACTTGATCAAG+TGG | 0.552154 | 1_2:+72296911 | None:intergenic |
| ATACCCAAAACGACGAGAGT+TGG | 0.553440 | 1_2:+72296846 | None:intergenic |
| TGTACCAATAGGAAGCTGAT+TGG | 0.553636 | 1_2:-72298928 | Msa0090330:intron |
| ATGATCCATCTTTAAAATGG+TGG | 0.553755 | 1_2:+72294388 | None:intergenic |
| CGAAGAAACGACGGCTGTGA+GGG | 0.555876 | 1_2:-72293953 | Msa0090330:CDS |
| TCAACATGGTCATGGTAAAG+AGG | 0.555970 | 1_2:-72295231 | Msa0090330:five_prime_UTR |
| AGCAATGTGAAGAAGGAACC+TGG | 0.558536 | 1_2:-72294768 | Msa0090330:five_prime_UTR |
| TATTGGAGCTCCAGGTGGTG+TGG | 0.559575 | 1_2:+72294515 | None:intergenic |
| CACACACTTTCCATCAAATG+TGG | 0.562114 | 1_2:-72295698 | Msa0090330:five_prime_UTR |
| TGAATGCCTGTGCTGGATTG+CGG | 0.563510 | 1_2:-72296354 | Msa0090330:five_prime_UTR |
| TCCATCGGCTTCAAATGGAA+TGG | 0.563602 | 1_2:+72294977 | None:intergenic |
| CATGGTCTGCAATGATTGGA+GGG | 0.565196 | 1_2:-72295259 | Msa0090330:five_prime_UTR |
| AGAAGGAACCTGGAATGAGT+TGG | 0.566310 | 1_2:-72294758 | Msa0090330:five_prime_UTR |
| CAAAAGACCATATTATTGCA+GGG | 0.567133 | 1_2:-72295883 | Msa0090330:five_prime_UTR |
| TTTGTTTAAACGGATGGTTG+AGG | 0.569080 | 1_2:-72296416 | Msa0090330:five_prime_UTR |
| CACAGAGAGGTATAGTCTCA+TGG | 0.569419 | 1_2:-72295277 | Msa0090330:five_prime_UTR |
| GAGAAACCGCACGAGACTCT+CGG | 0.570537 | 1_2:+72299441 | None:intergenic |
| TGTATATCAGTCTCTATGAT+GGG | 0.571783 | 1_2:+72294615 | None:intergenic |
| TGCTTGTAAAATAATTACGA+AGG | 0.572674 | 1_2:-72293798 | Msa0090330:CDS |
| GCTTGTAAAATAATTACGAA+GGG | 0.573703 | 1_2:-72293797 | Msa0090330:CDS |
| AACTTGTCGGCATATGAGCA+AGG | 0.576182 | 1_2:-72295428 | Msa0090330:five_prime_UTR |
| ACTTGATAAGGTGAACACAT+TGG | 0.576785 | 1_2:+72296078 | None:intergenic |
| AGGCATTCAATATAATTGAA+AGG | 0.576928 | 1_2:+72296368 | None:intergenic |
| AGATCGCAGAAGTGGAGCAA+TGG | 0.577523 | 1_2:-72293434 | Msa0090330:CDS |
| GCCTGTGCTGGATTGCGGGA+TGG | 0.578009 | 1_2:-72296349 | Msa0090330:five_prime_UTR |
| AGAGACTGATATACATAATG+TGG | 0.579445 | 1_2:-72294607 | Msa0090330:five_prime_UTR |
| ATCATCCATCATCTCACACT+TGG | 0.579866 | 1_2:+72295934 | None:intergenic |
| CTCTGTGCATGTAATCACGC+TGG | 0.580088 | 1_2:-72295140 | Msa0090330:five_prime_UTR |
| TCAACATGGGGATGCAGAAG+AGG | 0.580466 | 1_2:-72295534 | Msa0090330:five_prime_UTR |
| ATACATAACAACCAAAGTGT+TGG | 0.583432 | 1_2:+72296564 | None:intergenic |
| ATATCCATTCATTCCAAGGA+AGG | 0.584369 | 1_2:+72298420 | None:intergenic |
| CAATAAGTTACTGAAAGTGT+GGG | 0.585604 | 1_2:-72297803 | Msa0090330:five_prime_UTR |
| AACATGCTTTAAGAACAGTT+GGG | 0.586486 | 1_2:+72296668 | None:intergenic |
| TTATGCATCAGCAGGGATGT+GGG | 0.587933 | 1_2:-72294826 | Msa0090330:five_prime_UTR |
| TCAATTCCATCGTCCAACAA+TGG | 0.590381 | 1_2:-72298140 | Msa0090330:five_prime_UTR |
| TTGTTATGTATGCCAAATGC+GGG | 0.591481 | 1_2:-72296552 | Msa0090330:five_prime_UTR |
| AGCCGATGGATCCGTTTGGG+GGG | 0.592233 | 1_2:-72294964 | Msa0090330:five_prime_UTR |
| GGATATGTTGTCGTGATGGA+GGG | 0.592592 | 1_2:+72294116 | None:intergenic |
| AGAAGAATCTGTCTTAAAGA+CGG | 0.593283 | 1_2:-72296958 | Msa0090330:five_prime_UTR |
| GAAGTTCAATAGCTTGTGAT+CGG | 0.593559 | 1_2:-72293775 | Msa0090330:CDS |
| CCAACAAGATGGGGTGAAAG+GGG | 0.593928 | 1_2:+72293499 | None:intergenic |
| TTGATCTCCTTGGAAGATCA+GGG | 0.596655 | 1_2:-72295031 | Msa0090330:five_prime_UTR |
| TTGCTTCCATTGTTGGACGA+TGG | 0.596890 | 1_2:+72298134 | None:intergenic |
| GTATGTAGGTATGATTCTGA+AGG | 0.598223 | 1_2:-72298197 | Msa0090330:intron |
| CAATGGGGTTGAAGGATTTG+GGG | 0.599050 | 1_2:-72296036 | Msa0090330:five_prime_UTR |
| GTTAATATGTATGCAAAATG+TGG | 0.600162 | 1_2:-72295338 | Msa0090330:five_prime_UTR |
| ATAGCAAGATTTGAATGAGG+TGG | 0.600907 | 1_2:-72298477 | Msa0090330:five_prime_UTR |
| GGTTGGATATGTTGTCGTGA+TGG | 0.602059 | 1_2:+72294112 | None:intergenic |
| TGGCAGCAGTTATGCAGCAA+AGG | 0.603105 | 1_2:-72293464 | Msa0090330:CDS |
| TTCAGAGAAAGACTCTGAGA+GGG | 0.603612 | 1_2:-72292803 | Msa0090330:three_prime_UTR |
| TCAAAGTACTGAACCAAGAA+CGG | 0.608017 | 1_2:-72296806 | Msa0090330:five_prime_UTR |
| TACATAACCTCAAACCTTCG+GGG | 0.610221 | 1_2:-72298080 | Msa0090330:five_prime_UTR |
| GACAACATATCCAACCTCAC+TGG | 0.610446 | 1_2:-72294105 | Msa0090330:CDS |
| GGATGGAGGTATCGGAAGGA+CGG | 0.611939 | 1_2:-72296332 | Msa0090330:five_prime_UTR |
| TTGCAGGGAAAGAGCCAAAG+AGG | 0.612196 | 1_2:+72299406 | None:intergenic |
| GGAATAGCAAGATTTGAATG+AGG | 0.612652 | 1_2:-72298480 | Msa0090330:five_prime_UTR |
| GTTGGATTGAGGTCAAAGAC+AGG | 0.613813 | 1_2:-72294740 | Msa0090330:five_prime_UTR |
| ACGAATGACACGGTAATCCG+TGG | 0.614291 | 1_2:-72294263 | Msa0090330:five_prime_UTR |
| ACTCTTATTGGAGCTCCAGG+TGG | 0.617053 | 1_2:+72294510 | None:intergenic |
| CATTCCAAGAAACAGTGTCT+GGG | 0.617063 | 1_2:+72296185 | None:intergenic |
| GGTGGAGAAAGGATCTTCAT+GGG | 0.617922 | 1_2:-72298459 | Msa0090330:five_prime_UTR |
| GACCATATTCCAACAAGATG+GGG | 0.619241 | 1_2:+72293490 | None:intergenic |
| GGGTTGGCTCAACATGGTCA+TGG | 0.619989 | 1_2:-72295239 | Msa0090330:five_prime_UTR |
| TAACTGCATATTCTCAACAT+GGG | 0.621062 | 1_2:-72295547 | Msa0090330:five_prime_UTR |
| TTACAAGCAATAGGGATGTG+TGG | 0.621950 | 1_2:+72293812 | None:intergenic |
| AAACCCTGAGACCACAGTCA+TGG | 0.623461 | 1_2:+72296606 | None:intergenic |
| GGTTTCTGAGACTTGAGTGG+CGG | 0.623618 | 1_2:+72296887 | None:intergenic |
| AATGGTTTCTGAGACTTGAG+TGG | 0.623715 | 1_2:+72296884 | None:intergenic |
| AGGGAAACTAAATGAAGCAG+TGG | 0.624939 | 1_2:-72295012 | Msa0090330:five_prime_UTR |
| GCATCAACCTACTAGAATCA+CGG | 0.625082 | 1_2:-72293390 | Msa0090330:CDS |
| ATTTAATGAGATGTGTACGT+TGG | 0.626457 | 1_2:-72296716 | Msa0090330:five_prime_UTR |
| CTGATGCATAAATGTTTGCA+AGG | 0.627143 | 1_2:+72294838 | None:intergenic |
| ATTGGAGGGTTGGCTCAACA+TGG | 0.628379 | 1_2:-72295245 | Msa0090330:five_prime_UTR |
| GTCGTTTCTTCGTCGCTCAG+AGG | 0.630788 | 1_2:+72293964 | None:intergenic |
| TTTCAGAGAAAGACTCTGAG+AGG | 0.631808 | 1_2:-72292804 | Msa0090330:three_prime_UTR |
| TGCGGGATGGAGGTATCGGA+AGG | 0.632167 | 1_2:-72296336 | Msa0090330:five_prime_UTR |
| TGCAAAATGTGGAAGCATAG+AGG | 0.633122 | 1_2:-72295327 | Msa0090330:five_prime_UTR |
| ATATTACCAATAATCACCAC+AGG | 0.635816 | 1_2:+72294362 | None:intergenic |
| AATATTCGAAGAGCGCACTT+GGG | 0.643345 | 1_2:-72295597 | Msa0090330:five_prime_UTR |
| TTGATATGTATGCAAAAGCA+GGG | 0.646180 | 1_2:-72296249 | Msa0090330:five_prime_UTR |
| GTTCAATAGCTTGTGATCGG+AGG | 0.646389 | 1_2:-72293772 | Msa0090330:CDS |
| TGTGCTGGATTGCGGGATGG+AGG | 0.648251 | 1_2:-72296346 | Msa0090330:five_prime_UTR |
| AACTGCATATTCTCAACATG+GGG | 0.648588 | 1_2:-72295546 | Msa0090330:five_prime_UTR |
| AACAAAACACACGAATGACA+CGG | 0.648805 | 1_2:-72294273 | Msa0090330:five_prime_UTR |
| ACTTGTCGGCATATGAGCAA+GGG | 0.649497 | 1_2:-72295427 | Msa0090330:five_prime_UTR |
| ACATAACCTCAAACCTTCGG+GGG | 0.650007 | 1_2:-72298079 | Msa0090330:five_prime_UTR |
| AAAGATGGATCATGTTCCTG+TGG | 0.650158 | 1_2:-72294378 | Msa0090330:five_prime_UTR |
| CAAACATTTATGCATCAGCA+GGG | 0.652125 | 1_2:-72294833 | Msa0090330:five_prime_UTR |
| ATACGAATTTGAGAAAGGTG+TGG | 0.653011 | 1_2:+72294457 | None:intergenic |
| ACGAAGAAACGACGGCTGTG+AGG | 0.655214 | 1_2:-72293954 | Msa0090330:CDS |
| CCATCGTCTTCACAACGGAA+AGG | 0.657005 | 1_2:+72294082 | None:intergenic |
| AAATCCAAACTTGATCAAGT+GGG | 0.659556 | 1_2:+72296912 | None:intergenic |
| GTTGTTATGTATGCCAAATG+CGG | 0.668776 | 1_2:-72296553 | Msa0090330:five_prime_UTR |
| TTGCACGTGACAAGAAAACA+AGG | 0.668856 | 1_2:+72296465 | None:intergenic |
| AAAGGTTCATGCCATGACTG+TGG | 0.670951 | 1_2:-72296617 | Msa0090330:five_prime_UTR |
| ATAACTGCATATTCTCAACA+TGG | 0.671619 | 1_2:-72295548 | Msa0090330:five_prime_UTR |
| ACGCTGGTTTGGTAAATGAG+GGG | 0.674173 | 1_2:-72295124 | Msa0090330:five_prime_UTR |
| CCTTTCCGTTGTGAAGACGA+TGG | 0.674592 | 1_2:-72294082 | Msa0090330:CDS |
| GAGCAATGGATGGATTTGGA+TGG | 0.675607 | 1_2:-72293420 | Msa0090330:CDS |
| TCACAGTGAGAAACTTGCTG+TGG | 0.680687 | 1_2:-72294553 | Msa0090330:five_prime_UTR |
| ATCTCTGGTTACTCGCAGTG+TGG | 0.682317 | 1_2:-72295851 | Msa0090330:five_prime_UTR |
| TTGGAACCGAGAGTCTCGTG+CGG | 0.699867 | 1_2:-72299447 | Msa0090330:five_prime_UTR |
| TCACAACGGAAAGGCCAGTG+AGG | 0.703952 | 1_2:+72294091 | None:intergenic |
| ATTCGTTATATATACGTACA+CGG | 0.715814 | 1_2:-72294325 | Msa0090330:five_prime_UTR |
| TTGGTGAGAAAGCTGCAGAG+AGG | 0.716101 | 1_2:-72294902 | Msa0090330:five_prime_UTR |
| GGGCACCATCGTCTTCACAA+CGG | 0.719181 | 1_2:+72294077 | None:intergenic |
| ATTGGCCTGAAGAGACAGTG+TGG | 0.725566 | 1_2:+72293734 | None:intergenic |
| TCTGAGCGACGAAGAAACGA+CGG | 0.736663 | 1_2:-72293962 | Msa0090330:CDS |
| CATGAGACTATACCTCTCTG+TGG | 0.738112 | 1_2:+72295278 | None:intergenic |
| TAAAAGCATGTGCTGCAATG+GGG | 0.739287 | 1_2:-72296051 | Msa0090330:five_prime_UTR |
| TAAGGTCAGATCAGGCAACG+TGG | 0.760654 | 1_2:-72297846 | Msa0090330:five_prime_UTR |
| ATATGTATGCAAAAGCAGGG+AGG | 0.769744 | 1_2:-72296246 | Msa0090330:five_prime_UTR |
| AATAAGTTACTGAAAGTGTG+GGG | 0.797384 | 1_2:-72297802 | Msa0090330:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAAAGGTAAATTTAT+TGG | - | chr1_2:72293373-72293392 | Msa0090330:CDS | 10.0% |
| !!! | TCATATTTATATTTGTTATT+TGG | - | chr1_2:72293994-72294013 | Msa0090330:CDS | 10.0% |
| !! | AGATGATTTATTAATAAGTA+AGG | - | chr1_2:72293617-72293636 | Msa0090330:intron | 15.0% |
| !! | GTAAAATAAACTAGTAATTA+CGG | + | chr1_2:72293825-72293844 | None:intergenic | 15.0% |
| !!! | TTCAATTTTCTATTATATGT+TGG | - | chr1_2:72293869-72293888 | Msa0090330:intron | 15.0% |
| !! | AAATTAGAATCCAAAATAAT+GGG | + | chr1_2:72294205-72294224 | None:intergenic | 15.0% |
| !! | AAAATTAGAATCCAAAATAA+TGG | + | chr1_2:72294206-72294225 | None:intergenic | 15.0% |
| !! | ATTAAGAAAGATTTGAATAT+GGG | - | chr1_2:72295570-72295589 | Msa0090330:five_prime_UTR | 15.0% |
| !! | ATATAAGTTAAATTAAATCC+AGG | + | chr1_2:72298332-72298351 | None:intergenic | 15.0% |
| !!! | TAATTATTTTACAAGCAATA+GGG | + | chr1_2:72298412-72298431 | None:intergenic | 15.0% |
| !! | AATTAATCCTATAATTCTAA+AGG | + | chr1_2:72298561-72298580 | None:intergenic | 15.0% |
| !!! | TAATGATTCAATTTCTTTTT+AGG | - | chr1_2:72298651-72298670 | Msa0090330:intron | 15.0% |
| !!! | TTTATTGTTTAAATTTTGTG+AGG | + | chr1_2:72299122-72299141 | None:intergenic | 15.0% |
| !!! | ACAATAAATAGTTTTTTTTG+AGG | - | chr1_2:72299134-72299153 | Msa0090330:intron | 15.0% |
| !!! | CTTCATGTATTGTTTTTTTA+TGG | - | chr1_2:72293224-72293243 | Msa0090330:intron | 20.0% |
| !! | ATAAATATTAGAGCAATTGA+AGG | - | chr1_2:72293313-72293332 | Msa0090330:intron | 20.0% |
| !!! | TTTTAGAATATAGATCTGAA+TGG | - | chr1_2:72293712-72293731 | Msa0090330:intron | 20.0% |
| !!! | ATATTTGTTATTTGGTATGT+AGG | - | chr1_2:72294002-72294021 | Msa0090330:CDS | 20.0% |
| !! | TATTCATTTCAGAATAAATC+TGG | - | chr1_2:72294166-72294185 | Msa0090330:CDS | 20.0% |
| !!! | AATAATGTATCCCATTATTT+TGG | - | chr1_2:72294192-72294211 | Msa0090330:CDS | 20.0% |
| !! | ATGATTGAAATTTATTGAGT+TGG | + | chr1_2:72294268-72294287 | None:intergenic | 20.0% |
| !! | GAGGATATATAAATTTCATA+AGG | - | chr1_2:72294349-72294368 | Msa0090330:five_prime_UTR | 20.0% |
| !!! | ATGATTTTAGGCTAAAATAT+GGG | + | chr1_2:72294837-72294856 | None:intergenic | 20.0% |
| !! | TAGAACAATGAGATTAATAA+GGG | + | chr1_2:72295221-72295240 | None:intergenic | 20.0% |
| !! | TTAGAACAATGAGATTAATA+AGG | + | chr1_2:72295222-72295241 | None:intergenic | 20.0% |
| !! | ATTAATCTCATTGTTCTAAT+AGG | - | chr1_2:72295223-72295242 | Msa0090330:five_prime_UTR | 20.0% |
| !! | GATTAAGAAAGATTTGAATA+TGG | - | chr1_2:72295569-72295588 | Msa0090330:five_prime_UTR | 20.0% |
| !!! | AAACTGTTGATTTGTTTAAA+CGG | - | chr1_2:72295787-72295806 | Msa0090330:five_prime_UTR | 20.0% |
| !!! | GAAACAATATTTTGAAACAA+TGG | - | chr1_2:72297111-72297130 | Msa0090330:intron | 20.0% |
| !!! | TGATGAAATATTTGCTAAAT+TGG | - | chr1_2:72297537-72297556 | Msa0090330:intron | 20.0% |
| !! | AAATTCTTCTTTACTCTTAT+TGG | + | chr1_2:72297718-72297737 | None:intergenic | 20.0% |
| !! | TACAATCAAATTGTAAGAAT+CGG | + | chr1_2:72297920-72297939 | None:intergenic | 20.0% |
| !! | GAAAAAGAAAGAAGAAAAAA+AGG | + | chr1_2:72298012-72298031 | None:intergenic | 20.0% |
| !!! | GAATCTTTTTTTTTTTAACC+TGG | - | chr1_2:72298311-72298330 | Msa0090330:intron | 20.0% |
| !!! | GTAATTATTTTACAAGCAAT+AGG | + | chr1_2:72298413-72298432 | None:intergenic | 20.0% |
| !!! | AATACTTCCTTTAGAATTAT+AGG | - | chr1_2:72298551-72298570 | Msa0090330:intron | 20.0% |
| !! | TGCAATATAAACATATGATT+TGG | - | chr1_2:72298943-72298962 | Msa0090330:intron | 20.0% |
| !! | AGTAAGATGTCAAATAAAAT+GGG | + | chr1_2:72299037-72299056 | None:intergenic | 20.0% |
| !!! | TTTAAATTTTGTGAGGTTTT+AGG | + | chr1_2:72299115-72299134 | None:intergenic | 20.0% |
| !!! | TTTGTTTTCTTGTTTTTTTC+AGG | - | chr1_2:72299355-72299374 | Msa0090330:intron | 20.0% |
| !!! | TATTTTCTCGAGATTTTTTT+TGG | + | chr1_2:72299389-72299408 | None:intergenic | 20.0% |
| ! | TTGAATAGACAGTTAACAAA+TGG | + | chr1_2:72293104-72293123 | None:intergenic | 25.0% |
| !!! | CCTTTTAATTTAAGCAACAA+AGG | + | chr1_2:72293364-72293383 | None:intergenic | 25.0% |
| !! | CCTTTGTTGCTTAAATTAAA+AGG | - | chr1_2:72293361-72293380 | Msa0090330:CDS | 25.0% |
| ! | TCTAGATCTATTATTCATGA+TGG | - | chr1_2:72293426-72293445 | Msa0090330:CDS | 25.0% |
| ! | TTAAGTTCACAAAAGAGTAA+AGG | - | chr1_2:72293459-72293478 | Msa0090330:CDS | 25.0% |
| !!! | TAAGACATTAGTTTTCGTAT+TGG | - | chr1_2:72293679-72293698 | Msa0090330:intron | 25.0% |
| ! | AAAAATATCCATTCATTCCA+AGG | + | chr1_2:72293800-72293819 | None:intergenic | 25.0% |
| ! | ACAATGAAGAATGCAATTTA+AGG | - | chr1_2:72294462-72294481 | Msa0090330:five_prime_UTR | 25.0% |
| !! | AAAAACATTAAAAGCACACA+TGG | + | chr1_2:72294571-72294590 | None:intergenic | 25.0% |
| !! | GATGATTTTAGGCTAAAATA+TGG | + | chr1_2:72294838-72294857 | None:intergenic | 25.0% |
| ! | GATTAGAATTCTCTAATTTG+AGG | + | chr1_2:72294874-72294893 | None:intergenic | 25.0% |
| !! | TTATAAGATTCTGTCATTTG+GGG | + | chr1_2:72295096-72295115 | None:intergenic | 25.0% |
| !! | GTTATAAGATTCTGTCATTT+GGG | + | chr1_2:72295097-72295116 | None:intergenic | 25.0% |
| ! | AGTTATAAGATTCTGTCATT+TGG | + | chr1_2:72295098-72295117 | None:intergenic | 25.0% |
| ! | AGAACAATGAGATTAATAAG+GGG | + | chr1_2:72295220-72295239 | None:intergenic | 25.0% |
| ! | AGATTTGAATATGGGAAAAA+AGG | - | chr1_2:72295578-72295597 | Msa0090330:five_prime_UTR | 25.0% |
| !! | AGTGATTCTAAGAAATTGTT+TGG | - | chr1_2:72295690-72295709 | Msa0090330:five_prime_UTR | 25.0% |
| !! | GAAATTGTTTGGTATGATTT+TGG | - | chr1_2:72295701-72295720 | Msa0090330:five_prime_UTR | 25.0% |
| ! | AGGCATTCAATATAATTGAA+AGG | + | chr1_2:72295848-72295867 | None:intergenic | 25.0% |
| ! | TCTTCATGAGTATAATGATT+TGG | - | chr1_2:72296070-72296089 | Msa0090330:five_prime_UTR | 25.0% |
| !! | GGTTGAAATCTATATTTTCA+TGG | + | chr1_2:72296427-72296446 | None:intergenic | 25.0% |
| ! | TGAATAAATTCCACATTTGA+TGG | + | chr1_2:72296528-72296547 | None:intergenic | 25.0% |
| ! | AGACATAAATCCAAACTTAA+TGG | + | chr1_2:72296831-72296850 | None:intergenic | 25.0% |
| ! | GTTAATATGTATGCAAAATG+TGG | - | chr1_2:72296875-72296894 | Msa0090330:five_prime_UTR | 25.0% |
| !!! | ACAATATTTTGAAACAATGG+AGG | - | chr1_2:72297114-72297133 | Msa0090330:intron | 25.0% |
| ! | TTGTTGTCAGAGATATTAAT+AGG | - | chr1_2:72297800-72297819 | Msa0090330:five_prime_UTR | 25.0% |
| !! | AACATGATCCATCTTTAAAA+TGG | + | chr1_2:72297831-72297850 | None:intergenic | 25.0% |
| ! | ATTCGTTATATATACGTACA+CGG | - | chr1_2:72297888-72297907 | Msa0090330:intron | 25.0% |
| !!! | AAGTAACAACATTTTTTCCA+CGG | + | chr1_2:72297970-72297989 | None:intergenic | 25.0% |
| ! | AAGAAAGAAGAAAAAAAGGA+GGG | + | chr1_2:72298008-72298027 | None:intergenic | 25.0% |
| ! | AAAGAAAGAAGAAAAAAAGG+AGG | + | chr1_2:72298009-72298028 | None:intergenic | 25.0% |
| ! | TGCTTGTAAAATAATTACGA+AGG | - | chr1_2:72298415-72298434 | Msa0090330:five_prime_UTR | 25.0% |
| ! | GCTTGTAAAATAATTACGAA+GGG | - | chr1_2:72298416-72298435 | Msa0090330:five_prime_UTR | 25.0% |
| ! | AAAAAAAATACTGTGTGCAT+TGG | + | chr1_2:72298602-72298621 | None:intergenic | 25.0% |
| ! | GAGTAAGATGTCAAATAAAA+TGG | + | chr1_2:72299038-72299057 | None:intergenic | 25.0% |
| ! | AATCTGATGAATAAGTTACT+GGG | - | chr1_2:72299263-72299282 | Msa0090330:intron | 25.0% |
| ! | GCAGTATTTGATTTCAATGT+TGG | + | chr1_2:72292922-72292941 | None:intergenic | 30.0% |
| ! | GAGATAATTTTCGCATTGTT+TGG | - | chr1_2:72293051-72293070 | Msa0090330:intron | 30.0% |
| ! | ACAAATGGTTTCTGAGAATT+GGG | + | chr1_2:72293089-72293108 | None:intergenic | 30.0% |
| ! | AACAAATGGTTTCTGAGAAT+TGG | + | chr1_2:72293090-72293109 | None:intergenic | 30.0% |
| TTGTGAAAATGTGTACCAAT+AGG | - | chr1_2:72293274-72293293 | Msa0090330:intron | 30.0% | |
| ! | TTTTCATACACTTACACACA+CGG | - | chr1_2:72293538-72293557 | Msa0090330:CDS | 30.0% |
| AAATTTCATAAGGTCAGATC+AGG | - | chr1_2:72294359-72294378 | Msa0090330:five_prime_UTR | 30.0% | |
| TAACTTATTGCAAGTCTAAC+AGG | + | chr1_2:72294400-72294419 | None:intergenic | 30.0% | |
| ! | CAATAAGTTACTGAAAGTGT+GGG | - | chr1_2:72294410-72294429 | Msa0090330:five_prime_UTR | 30.0% |
| ! | AATAAGTTACTGAAAGTGTG+GGG | - | chr1_2:72294411-72294430 | Msa0090330:five_prime_UTR | 30.0% |
| GTTGAGATTCCTTAAGTTTA+GGG | - | chr1_2:72294720-72294739 | Msa0090330:five_prime_UTR | 30.0% | |
| ! | TGTTTTTCACCCTAAACTTA+AGG | + | chr1_2:72294732-72294751 | None:intergenic | 30.0% |
| TGGGAGAAAATATAAATGTG+CGG | + | chr1_2:72294818-72294837 | None:intergenic | 30.0% | |
| !!! | TCTATCTTTGGGATGATTTT+AGG | + | chr1_2:72294849-72294868 | None:intergenic | 30.0% |
| ! | AATTTGAGGTCTCTATCTTT+GGG | + | chr1_2:72294860-72294879 | None:intergenic | 30.0% |
| ! | TAATTTGAGGTCTCTATCTT+TGG | + | chr1_2:72294861-72294880 | None:intergenic | 30.0% |
| TATGGCATATAAGCATTCAA+AGG | + | chr1_2:72294964-72294983 | None:intergenic | 30.0% | |
| TTTGAATGCTTATATGCCAT+AGG | - | chr1_2:72294963-72294982 | Msa0090330:five_prime_UTR | 30.0% | |
| ATAAGGGGAAGAAAATAAGA+TGG | + | chr1_2:72295205-72295224 | None:intergenic | 30.0% | |
| AGAAGAATCTGTCTTAAAGA+CGG | - | chr1_2:72295255-72295274 | Msa0090330:five_prime_UTR | 30.0% | |
| AAATCCAAACTTGATCAAGT+GGG | + | chr1_2:72295304-72295323 | None:intergenic | 30.0% | |
| AAAATCCAAACTTGATCAAG+TGG | + | chr1_2:72295305-72295324 | None:intergenic | 30.0% | |
| ! | TGGAATAGAGTGTTAACAAA+TGG | + | chr1_2:72295350-72295369 | None:intergenic | 30.0% |
| !! | GTTTCATAAAGAAGCGTTAT+TGG | - | chr1_2:72295473-72295492 | Msa0090330:five_prime_UTR | 30.0% |
| ATTTAATGAGATGTGTACGT+TGG | - | chr1_2:72295497-72295516 | Msa0090330:five_prime_UTR | 30.0% | |
| TTTAATGAGATGTGTACGTT+GGG | - | chr1_2:72295498-72295517 | Msa0090330:five_prime_UTR | 30.0% | |
| !! | AACATGCTTTAAGAACAGTT+GGG | + | chr1_2:72295548-72295567 | None:intergenic | 30.0% |
| ATACATAACAACCAAAGTGT+TGG | + | chr1_2:72295652-72295671 | None:intergenic | 30.0% | |
| !! | TGTTGATTTGTTTAAACGGA+TGG | - | chr1_2:72295791-72295810 | Msa0090330:five_prime_UTR | 30.0% |
| ! | TTTTGCATACATATCAACCA+AGG | + | chr1_2:72295961-72295980 | None:intergenic | 30.0% |
| TTGATATGTATGCAAAAGCA+GGG | - | chr1_2:72295964-72295983 | Msa0090330:five_prime_UTR | 30.0% | |
| TTGAATGAGATGAAAAAGTC+TGG | - | chr1_2:72296104-72296123 | Msa0090330:five_prime_UTR | 30.0% | |
| ! | TAGTGATTCAGATTTGTTTG+TGG | - | chr1_2:72296232-72296251 | Msa0090330:five_prime_UTR | 30.0% |
| ! | GCAATAATATGGTCTTTTGT+TGG | + | chr1_2:72296329-72296348 | None:intergenic | 30.0% |
| ACAAAAGACCATATTATTGC+AGG | - | chr1_2:72296329-72296348 | Msa0090330:five_prime_UTR | 30.0% | |
| CAAAAGACCATATTATTGCA+GGG | - | chr1_2:72296330-72296349 | Msa0090330:five_prime_UTR | 30.0% | |
| ATAACTGCATATTCTCAACA+TGG | - | chr1_2:72296665-72296684 | Msa0090330:five_prime_UTR | 30.0% | |
| TAACTGCATATTCTCAACAT+GGG | - | chr1_2:72296666-72296685 | Msa0090330:five_prime_UTR | 30.0% | |
| TAAATCCAAACTTAATGGCA+TGG | + | chr1_2:72296826-72296845 | None:intergenic | 30.0% | |
| CATATTAACAAGAGAATTGC+TGG | + | chr1_2:72296864-72296883 | None:intergenic | 30.0% | |
| CTGACTAATGTAATATGGTT+TGG | + | chr1_2:72297049-72297068 | None:intergenic | 30.0% | |
| ! | GAACACTGACTAATGTAATA+TGG | + | chr1_2:72297054-72297073 | None:intergenic | 30.0% |
| ATCCACAAAAATGTTGAACT+TGG | - | chr1_2:72297292-72297311 | Msa0090330:intron | 30.0% | |
| AAATGTTGCCAATGTTAGAA+AGG | - | chr1_2:72297411-72297430 | Msa0090330:intron | 30.0% | |
| TTGCATAACCTTTCTAACAT+TGG | + | chr1_2:72297422-72297441 | None:intergenic | 30.0% | |
| TGTATATCAGTCTCTATGAT+GGG | + | chr1_2:72297601-72297620 | None:intergenic | 30.0% | |
| ATGTATATCAGTCTCTATGA+TGG | + | chr1_2:72297602-72297621 | None:intergenic | 30.0% | |
| AGAGACTGATATACATAATG+TGG | - | chr1_2:72297606-72297625 | Msa0090330:intron | 30.0% | |
| CTTAGATACGAATTTGAGAA+AGG | + | chr1_2:72297764-72297783 | None:intergenic | 30.0% | |
| !! | ATGATCCATCTTTAAAATGG+TGG | + | chr1_2:72297828-72297847 | None:intergenic | 30.0% |
| ATATTACCAATAATCACCAC+AGG | + | chr1_2:72297854-72297873 | None:intergenic | 30.0% | |
| AGAAAAAAAGGAGGGAAAAA+GGG | + | chr1_2:72298000-72298019 | None:intergenic | 30.0% | |
| AAGAAAAAAAGGAGGGAAAA+AGG | + | chr1_2:72298001-72298020 | None:intergenic | 30.0% | |
| AAAACGAAGACAGAAGAAAT+AGG | - | chr1_2:72298038-72298057 | Msa0090330:intron | 30.0% | |
| AAACGAAGACAGAAGAAATA+GGG | - | chr1_2:72298039-72298058 | Msa0090330:intron | 30.0% | |
| !! | TTGTTGTTCGATTCTTTTGA+TGG | - | chr1_2:72298181-72298200 | Msa0090330:five_prime_UTR | 30.0% |
| AATCTTCACAAAAACAGTGA+GGG | + | chr1_2:72298373-72298392 | None:intergenic | 30.0% | |
| TAATCTTCACAAAAACAGTG+AGG | + | chr1_2:72298374-72298393 | None:intergenic | 30.0% | |
| ! | ATAGCAATTTGCAACCTTTT+TGG | + | chr1_2:72298885-72298904 | None:intergenic | 30.0% |
| TAATGACATTCGATTAACTG+CGG | - | chr1_2:72298972-72298991 | Msa0090330:intron | 30.0% | |
| TCAAATAAAATGGGTGAAAG+TGG | + | chr1_2:72299028-72299047 | None:intergenic | 30.0% | |
| TCTGACAATATGATTATGCA+TGG | + | chr1_2:72299232-72299251 | None:intergenic | 30.0% | |
| CAATCTGATGAATAAGTTAC+TGG | - | chr1_2:72299262-72299281 | Msa0090330:intron | 30.0% | |
| ! | CTATGCTAAGCAACTTTTAA+AGG | - | chr1_2:72299473-72299492 | Msa0090330:five_prime_UTR | 30.0% |
| ! | TATTCAAACTCTCGTCGTTT+TGG | - | chr1_2:72293117-72293136 | Msa0090330:intron | 35.0% |
| !! | ATTCAAACTCTCGTCGTTTT+GGG | - | chr1_2:72293118-72293137 | Msa0090330:intron | 35.0% |
| TACTTTGATCAAGCAGTTTG+CGG | + | chr1_2:72293149-72293168 | None:intergenic | 35.0% | |
| ! | TTGAAGTATCAGTAGAAGTG+TGG | + | chr1_2:72293177-72293196 | None:intergenic | 35.0% |
| GGAATAGCAAGATTTGAATG+AGG | - | chr1_2:72293733-72293752 | Msa0090330:intron | 35.0% | |
| ATAGCAAGATTTGAATGAGG+TGG | - | chr1_2:72293736-72293755 | Msa0090330:CDS | 35.0% | |
| ATATCCATTCATTCCAAGGA+AGG | + | chr1_2:72293796-72293815 | None:intergenic | 35.0% | |
| ! | GTGTGAAGTGAATTGATTTC+AGG | - | chr1_2:72293904-72293923 | Msa0090330:intron | 35.0% |
| GTATGTAGGTATGATTCTGA+AGG | - | chr1_2:72294016-72294035 | Msa0090330:CDS | 35.0% | |
| CTTACATAACCTCAAACCTT+CGG | - | chr1_2:72294131-72294150 | Msa0090330:CDS | 35.0% | |
| TTACATAACCTCAAACCTTC+GGG | - | chr1_2:72294132-72294151 | Msa0090330:CDS | 35.0% | |
| ATTTCCTAGCATTGCTAAGA+TGG | - | chr1_2:72294228-72294247 | Msa0090330:CDS | 35.0% | |
| TTAACCATCTTAGCAATGCT+AGG | + | chr1_2:72294235-72294254 | None:intergenic | 35.0% | |
| GCAATAAGTTACTGAAAGTG+TGG | - | chr1_2:72294409-72294428 | Msa0090330:five_prime_UTR | 35.0% | |
| TGAAGTTGTCTCAATCAATC+TGG | - | chr1_2:72294488-72294507 | Msa0090330:five_prime_UTR | 35.0% | |
| CTCAATCAATCTGGAAGTTA+CGG | - | chr1_2:72294497-72294516 | Msa0090330:five_prime_UTR | 35.0% | |
| AAGTTACGGTAATGAAGCAT+GGG | - | chr1_2:72294511-72294530 | Msa0090330:five_prime_UTR | 35.0% | |
| AGACACCAATGACATTTAAG+TGG | - | chr1_2:72294692-72294711 | Msa0090330:five_prime_UTR | 35.0% | |
| CCAATGACATTTAAGTGGAA+CGG | - | chr1_2:72294697-72294716 | Msa0090330:five_prime_UTR | 35.0% | |
| CAATGACATTTAAGTGGAAC+GGG | - | chr1_2:72294698-72294717 | Msa0090330:five_prime_UTR | 35.0% | |
| GGTTGAGATTCCTTAAGTTT+AGG | - | chr1_2:72294719-72294738 | Msa0090330:five_prime_UTR | 35.0% | |
| TATAAATGTGCGGAGAAATC+TGG | + | chr1_2:72294808-72294827 | None:intergenic | 35.0% | |
| TAATCTCAACTGAAACCCTT+TGG | - | chr1_2:72294889-72294908 | Msa0090330:five_prime_UTR | 35.0% | |
| CTTATATGCCATAGGATGAA+AGG | - | chr1_2:72294971-72294990 | Msa0090330:five_prime_UTR | 35.0% | |
| TAAAGACGGAGTCAAGATAA+TGG | - | chr1_2:72295269-72295288 | Msa0090330:five_prime_UTR | 35.0% | |
| !! | TCAAAGTACTGAACCAAGAA+CGG | - | chr1_2:72295407-72295426 | Msa0090330:five_prime_UTR | 35.0% |
| !! | GAACATGCTTTAAGAACAGT+TGG | + | chr1_2:72295549-72295568 | None:intergenic | 35.0% |
| !! | TGCTTTTGTTTCCAACACTT+TGG | - | chr1_2:72295638-72295657 | Msa0090330:five_prime_UTR | 35.0% |
| GTTGTTATGTATGCCAAATG+CGG | - | chr1_2:72295660-72295679 | Msa0090330:five_prime_UTR | 35.0% | |
| TTGTTATGTATGCCAAATGC+GGG | - | chr1_2:72295661-72295680 | Msa0090330:five_prime_UTR | 35.0% | |
| TTTGTTTAAACGGATGGTTG+AGG | - | chr1_2:72295797-72295816 | Msa0090330:five_prime_UTR | 35.0% | |
| TTGTTTAAACGGATGGTTGA+GGG | - | chr1_2:72295798-72295817 | Msa0090330:five_prime_UTR | 35.0% | |
| ATTGAAAGGCTGTACTCATT+AGG | + | chr1_2:72295834-72295853 | None:intergenic | 35.0% | |
| ATTATATTGAATGCCTGTGC+TGG | - | chr1_2:72295852-72295871 | Msa0090330:five_prime_UTR | 35.0% | |
| ! | TCAATTTTCTGCAAATGCCT+TGG | - | chr1_2:72295941-72295960 | Msa0090330:five_prime_UTR | 35.0% |
| GTTGATATGTATGCAAAAGC+AGG | - | chr1_2:72295963-72295982 | Msa0090330:five_prime_UTR | 35.0% | |
| TCTTGGAATGCAATTATTGC+TGG | - | chr1_2:72296041-72296060 | Msa0090330:five_prime_UTR | 35.0% | |
| CTTGATAAGGTGAACACATT+GGG | + | chr1_2:72296137-72296156 | None:intergenic | 35.0% | |
| ACTTGATAAGGTGAACACAT+TGG | + | chr1_2:72296138-72296157 | None:intergenic | 35.0% | |
| !!! | TGCTTTTAAGGCACTTGATA+AGG | + | chr1_2:72296150-72296169 | None:intergenic | 35.0% |
| ! | TTAAAAGCATGTGCTGCAAT+GGG | - | chr1_2:72296161-72296180 | Msa0090330:five_prime_UTR | 35.0% |
| GAGACAGATACATTCTTGTT+CGG | - | chr1_2:72296199-72296218 | Msa0090330:five_prime_UTR | 35.0% | |
| GAACTGTTGACAAAGTAGTT+TGG | + | chr1_2:72296448-72296467 | None:intergenic | 35.0% | |
| GTCAACAGTTCTTAAATCTG+TGG | - | chr1_2:72296457-72296476 | Msa0090330:five_prime_UTR | 35.0% | |
| AACTGCATATTCTCAACATG+GGG | - | chr1_2:72296667-72296686 | Msa0090330:five_prime_UTR | 35.0% | |
| AAAAGAGAACTGCAGACAAA+CGG | + | chr1_2:72296752-72296771 | None:intergenic | 35.0% | |
| GAAACAATGGAGGAAAAGTT+TGG | - | chr1_2:72297124-72297143 | Msa0090330:intron | 35.0% | |
| ! | CACCAAGTTCAACATTTTTG+TGG | + | chr1_2:72297297-72297316 | None:intergenic | 35.0% |
| CTGATGCATAAATGTTTGCA+AGG | + | chr1_2:72297378-72297397 | None:intergenic | 35.0% | |
| CAAACATTTATGCATCAGCA+GGG | - | chr1_2:72297380-72297399 | Msa0090330:intron | 35.0% | |
| AGGATACACACTTTCATTGT+TGG | - | chr1_2:72297493-72297512 | Msa0090330:intron | 35.0% | |
| TAATGTGGAACGAAGTGAAA+AGG | - | chr1_2:72297621-72297640 | Msa0090330:intron | 35.0% | |
| ATACGAATTTGAGAAAGGTG+TGG | + | chr1_2:72297759-72297778 | None:intergenic | 35.0% | |
| ! | TCGTATCTAAGCTTGTTTCA+AGG | - | chr1_2:72297773-72297792 | Msa0090330:five_prime_UTR | 35.0% |
| !! | AGGTTCCACCATTTTAAAGA+TGG | - | chr1_2:72297820-72297839 | Msa0090330:five_prime_UTR | 35.0% |
| AACAAAACACACGAATGACA+CGG | - | chr1_2:72297940-72297959 | Msa0090330:intron | 35.0% | |
| GAAAAAAAGGAGGGAAAAAG+GGG | + | chr1_2:72297999-72298018 | None:intergenic | 35.0% | |
| GAAATAGGGAAAGAAGAGAA+AGG | - | chr1_2:72298053-72298072 | Msa0090330:intron | 35.0% | |
| ! | TTGTTCGATTCTTTTGATGG+AGG | - | chr1_2:72298184-72298203 | Msa0090330:five_prime_UTR | 35.0% |
| ! | GAAGTTCAATAGCTTGTGAT+CGG | - | chr1_2:72298438-72298457 | Msa0090330:five_prime_UTR | 35.0% |
| TAAGACACTCACATTCACAT+TGG | + | chr1_2:72298500-72298519 | None:intergenic | 35.0% | |
| TGACCATATTCCAACAAGAT+GGG | + | chr1_2:72298727-72298746 | None:intergenic | 35.0% | |
| ATGACCATATTCCAACAAGA+TGG | + | chr1_2:72298728-72298747 | None:intergenic | 35.0% | |
| CTTGTTGGAATATGGTCATA+TGG | - | chr1_2:72298729-72298748 | Msa0090330:intron | 35.0% | |
| TTATAGCAATTCCGAGTTCT+AGG | + | chr1_2:72299087-72299106 | None:intergenic | 35.0% | |
| TCAGTATCATGAGAGTAAGA+TGG | + | chr1_2:72299160-72299179 | None:intergenic | 35.0% | |
| TCTGCAACTCAATTCCTCTT+TGG | - | chr1_2:72292793-72292812 | Msa0090330:three_prime_UTR | 40.0% | |
| CAAGCAAAATGCGATTTGCA+GGG | + | chr1_2:72292825-72292844 | None:intergenic | 40.0% | |
| TCAAGCAAAATGCGATTTGC+AGG | + | chr1_2:72292826-72292845 | None:intergenic | 40.0% | |
| ATATGTGTGTGAACAATGCG+TGG | - | chr1_2:72293001-72293020 | Msa0090330:intron | 40.0% | |
| ! | AATGGTTTCTGAGAATTGGG+TGG | + | chr1_2:72293086-72293105 | None:intergenic | 40.0% |
| ACTTTGATCAAGCAGTTTGC+GGG | + | chr1_2:72293148-72293167 | None:intergenic | 40.0% | |
| TGTACCAATAGGAAGCTGAT+TGG | - | chr1_2:72293285-72293304 | Msa0090330:intron | 40.0% | |
| TTTGCCAATCAGCTTCCTAT+TGG | + | chr1_2:72293292-72293311 | None:intergenic | 40.0% | |
| TTTCCATGAACGCAAGACAT+TGG | + | chr1_2:72293489-72293508 | None:intergenic | 40.0% | |
| GATTTGAATGAGGTGGAGAA+AGG | - | chr1_2:72293743-72293762 | Msa0090330:CDS | 40.0% | |
| GAAAGGATCTTCATGGGAAT+TGG | - | chr1_2:72293760-72293779 | Msa0090330:CDS | 40.0% | |
| TCAATTCCATCGTCCAACAA+TGG | - | chr1_2:72294073-72294092 | Msa0090330:CDS | 40.0% | |
| !! | CACTGATTTGCTTCCATTGT+TGG | + | chr1_2:72294089-72294108 | None:intergenic | 40.0% |
| TACATAACCTCAAACCTTCG+GGG | - | chr1_2:72294133-72294152 | Msa0090330:CDS | 40.0% | |
| !! | CCTCTAAAACTGAAGAATGC+AGG | + | chr1_2:72294333-72294352 | None:intergenic | 40.0% |
| !! | CCTGCATTCTTCAGTTTTAG+AGG | - | chr1_2:72294330-72294349 | Msa0090330:five_prime_UTR | 40.0% |
| GAAGTTACGGTAATGAAGCA+TGG | - | chr1_2:72294510-72294529 | Msa0090330:five_prime_UTR | 40.0% | |
| CCGTTCCACTTAAATGTCAT+TGG | + | chr1_2:72294700-72294719 | None:intergenic | 40.0% | |
| TCAACTGAAACCCTTTGGTA+AGG | - | chr1_2:72294894-72294913 | Msa0090330:five_prime_UTR | 40.0% | |
| CAACTGAAACCCTTTGGTAA+GGG | - | chr1_2:72294895-72294914 | Msa0090330:five_prime_UTR | 40.0% | |
| AAGTGCAATCCCTTACCAAA+GGG | + | chr1_2:72294907-72294926 | None:intergenic | 40.0% | |
| ACTTGGATCGTCTAACTTTG+TGG | - | chr1_2:72294923-72294942 | Msa0090330:five_prime_UTR | 40.0% | |
| GCATATAAGCATTCAAAGGC+CGG | + | chr1_2:72294960-72294979 | None:intergenic | 40.0% | |
| ! | AGGGTTTAGGGTTTAGAAGA+TGG | + | chr1_2:72295066-72295085 | None:intergenic | 40.0% |
| ! | TGTCATTTGGGGTGAGTTTA+GGG | + | chr1_2:72295085-72295104 | None:intergenic | 40.0% |
| !! | AATGGTTTCTGAGACTTGAG+TGG | + | chr1_2:72295332-72295351 | None:intergenic | 40.0% |
| ! | TATTCCAACTCTCGTCGTTT+TGG | - | chr1_2:72295363-72295382 | Msa0090330:five_prime_UTR | 40.0% |
| !! | ATTCCAACTCTCGTCGTTTT+GGG | - | chr1_2:72295364-72295383 | Msa0090330:five_prime_UTR | 40.0% |
| TACTTTGATCAAGCAGGTTG+CGG | + | chr1_2:72295395-72295414 | None:intergenic | 40.0% | |
| GTTCAGTACTTTGATCAAGC+AGG | + | chr1_2:72293155-72293174 | None:intergenic | 40.0% | |
| !! | AACCAAGAACGGTTGTTTCT+TGG | - | chr1_2:72295418-72295437 | Msa0090330:five_prime_UTR | 40.0% |
| ATATCTCGCTACGTGCAAAA+TGG | - | chr1_2:72295450-72295469 | Msa0090330:five_prime_UTR | 40.0% | |
| TATCTCGCTACGTGCAAAAT+GGG | - | chr1_2:72295451-72295470 | Msa0090330:five_prime_UTR | 40.0% | |
| !!! | TTTGGTATGATTTTGGAGCC+AGG | - | chr1_2:72295708-72295727 | Msa0090330:five_prime_UTR | 40.0% |
| TTGCACGTGACAAGAAAACA+AGG | + | chr1_2:72295751-72295770 | None:intergenic | 40.0% | |
| CATGTCCAAGCTTCATTAGA+AGG | + | chr1_2:72295914-72295933 | None:intergenic | 40.0% | |
| CTTCTAATGAAGCTTGGACA+TGG | - | chr1_2:72295912-72295931 | Msa0090330:five_prime_UTR | 40.0% | |
| AATGAAGCTTGGACATGGTT+TGG | - | chr1_2:72295917-72295936 | Msa0090330:five_prime_UTR | 40.0% | |
| ATATGTATGCAAAAGCAGGG+AGG | - | chr1_2:72295967-72295986 | Msa0090330:five_prime_UTR | 40.0% | |
| CATTCCAAGAAACAGTGTCT+GGG | + | chr1_2:72296031-72296050 | None:intergenic | 40.0% | |
| ! | CATTGCAGCACATGCTTTTA+AGG | + | chr1_2:72296162-72296181 | None:intergenic | 40.0% |
| ! | CTTAAAAGCATGTGCTGCAA+TGG | - | chr1_2:72296160-72296179 | Msa0090330:five_prime_UTR | 40.0% |
| ! | TAAAAGCATGTGCTGCAATG+GGG | - | chr1_2:72296162-72296181 | Msa0090330:five_prime_UTR | 40.0% |
| ! | TCAGATTTGTTTGTGGCTGT+TGG | - | chr1_2:72296239-72296258 | Msa0090330:five_prime_UTR | 40.0% |
| GTATTCCAAGTGTGAGATGA+TGG | - | chr1_2:72296274-72296293 | Msa0090330:five_prime_UTR | 40.0% | |
| ATCATCCATCATCTCACACT+TGG | + | chr1_2:72296282-72296301 | None:intergenic | 40.0% | |
| GAGCATTCCCTGCAATAATA+TGG | + | chr1_2:72296340-72296359 | None:intergenic | 40.0% | |
| !! | TACTTTGATTTGCTGCAAGC+TGG | + | chr1_2:72296483-72296502 | None:intergenic | 40.0% |
| CACACACTTTCCATCAAATG+TGG | - | chr1_2:72296515-72296534 | Msa0090330:five_prime_UTR | 40.0% | |
| AACAGTCTGCTTGACACTTA+TGG | - | chr1_2:72296563-72296582 | Msa0090330:five_prime_UTR | 40.0% | |
| ! | AAATATTCGAAGAGCGCACT+TGG | - | chr1_2:72296615-72296634 | Msa0090330:five_prime_UTR | 40.0% |
| ! | AATATTCGAAGAGCGCACTT+GGG | - | chr1_2:72296616-72296635 | Msa0090330:five_prime_UTR | 40.0% |
| AAATGCTTGCGCAAACTTGT+CGG | - | chr1_2:72296772-72296791 | Msa0090330:five_prime_UTR | 40.0% | |
| CATGTCCATGCCATTAAGTT+TGG | - | chr1_2:72296818-72296837 | Msa0090330:five_prime_UTR | 40.0% | |
| ! | TGCAAAATGTGGAAGCATAG+AGG | - | chr1_2:72296886-72296905 | Msa0090330:five_prime_UTR | 40.0% |
| TATACCTCTCTGTGGTATCT+CGG | + | chr1_2:72296930-72296949 | None:intergenic | 40.0% | |
| TCAACATGGTCATGGTAAAG+AGG | - | chr1_2:72296982-72297001 | Msa0090330:intron | 40.0% | |
| ATTGATCTCCTTGGAAGATC+AGG | - | chr1_2:72297181-72297200 | Msa0090330:intron | 40.0% | |
| TTGATCTCCTTGGAAGATCA+GGG | - | chr1_2:72297182-72297201 | Msa0090330:intron | 40.0% | |
| TTAGTTTCCCTGATCTTCCA+AGG | + | chr1_2:72297192-72297211 | None:intergenic | 40.0% | |
| AGGGAAACTAAATGAAGCAG+TGG | - | chr1_2:72297201-72297220 | Msa0090330:intron | 40.0% | |
| !! | ACAAGAGTACCAGATTTGTC+TGG | + | chr1_2:72297352-72297371 | None:intergenic | 40.0% |
| GCAAACATTTATGCATCAGC+AGG | - | chr1_2:72297379-72297398 | Msa0090330:intron | 40.0% | |
| GCAAAACAGCAATGTGAAGA+AGG | - | chr1_2:72297438-72297457 | Msa0090330:intron | 40.0% | |
| AGCGAACTTCTAAGTAAAGC+TGG | - | chr1_2:72297568-72297587 | Msa0090330:intron | 40.0% | |
| TTTACTCTTATTGGAGCTCC+AGG | + | chr1_2:72297709-72297728 | None:intergenic | 40.0% | |
| AAAGATGGATCATGTTCCTG+TGG | - | chr1_2:72297835-72297854 | Msa0090330:five_prime_UTR | 40.0% | |
| CATGTTCCTGTGGTGATTAT+TGG | - | chr1_2:72297845-72297864 | Msa0090330:five_prime_UTR | 40.0% | |
| CTCAGCAACAACTGGAAATT+GGG | + | chr1_2:72298159-72298178 | None:intergenic | 40.0% | |
| TTACAAGCAATAGGGATGTG+TGG | + | chr1_2:72298404-72298423 | None:intergenic | 40.0% | |
| TTAATTTCCCACCTTCCTGT+AGG | - | chr1_2:72298575-72298594 | Msa0090330:intron | 40.0% | |
| ! | AGGGGTTTTTCTATCTGTCA+AGG | + | chr1_2:72298699-72298718 | None:intergenic | 40.0% |
| GACCATATTCCAACAAGATG+GGG | + | chr1_2:72298726-72298745 | None:intergenic | 40.0% | |
| GCATCAACCTACTAGAATCA+CGG | - | chr1_2:72298823-72298842 | Msa0090330:intron | 40.0% | |
| AAGAAAGCCGTGATTCTAGT+AGG | + | chr1_2:72298833-72298852 | None:intergenic | 40.0% | |
| ! | CTAGAATCACGGCTTTCTTT+TGG | - | chr1_2:72298834-72298853 | Msa0090330:intron | 40.0% |
| !! | CTTTTTGGAAACACTCAAGC+AGG | + | chr1_2:72298870-72298889 | None:intergenic | 40.0% |
| CTGCTTGAGTGTTTCCAAAA+AGG | - | chr1_2:72298868-72298887 | Msa0090330:five_prime_UTR | 40.0% | |
| CGAAAACTTCTCCTAGAACT+CGG | - | chr1_2:72299073-72299092 | Msa0090330:intron | 40.0% | |
| TTTCAGAGAAAGACTCTGAG+AGG | - | chr1_2:72299409-72299428 | Msa0090330:five_prime_UTR | 40.0% | |
| ! | TTCAGAGAAAGACTCTGAGA+GGG | - | chr1_2:72299410-72299429 | Msa0090330:five_prime_UTR | 40.0% |
| TGCTTCTCTCTCGTTCTCTT+TGG | - | chr1_2:72292747-72292766 | Msa0090330:three_prime_UTR | 45.0% | |
| TCACCAATGTCTTGCGTTCA+TGG | - | chr1_2:72293483-72293502 | Msa0090330:CDS | 45.0% | |
| AGGTGGAGAAAGGATCTTCA+TGG | - | chr1_2:72293753-72293772 | Msa0090330:CDS | 45.0% | |
| GGTGGAGAAAGGATCTTCAT+GGG | - | chr1_2:72293754-72293773 | Msa0090330:CDS | 45.0% | |
| AGGATCTTCATGGGAATTGG+AGG | - | chr1_2:72293763-72293782 | Msa0090330:CDS | 45.0% | |
| TTCATTCCAAGGAAGGTCCT+TGG | + | chr1_2:72293789-72293808 | None:intergenic | 45.0% | |
| AGGACCTTCCTTGGAATGAA+TGG | - | chr1_2:72293789-72293808 | Msa0090330:CDS | 45.0% | |
| TTGCTTCCATTGTTGGACGA+TGG | + | chr1_2:72294082-72294101 | None:intergenic | 45.0% | |
| ACATAACCTCAAACCTTCGG+GGG | - | chr1_2:72294134-72294153 | Msa0090330:CDS | 45.0% | |
| CACTTTCGTCCTACTGGTAT+TGG | - | chr1_2:72294537-72294556 | Msa0090330:five_prime_UTR | 45.0% | |
| GCATCAAAGCCAATACCAGT+AGG | + | chr1_2:72294549-72294568 | None:intergenic | 45.0% | |
| AATGTGCGGAGAAATCTGGA+GGG | + | chr1_2:72294804-72294823 | None:intergenic | 45.0% | |
| AAATGTGCGGAGAAATCTGG+AGG | + | chr1_2:72294805-72294824 | None:intergenic | 45.0% | |
| CAAGTGCAATCCCTTACCAA+AGG | + | chr1_2:72294908-72294927 | None:intergenic | 45.0% | |
| CTTTGGTAAGGGATTGCACT+TGG | - | chr1_2:72294906-72294925 | Msa0090330:five_prime_UTR | 45.0% | |
| CTTTGTGGCACCAAAGTTAC+CGG | - | chr1_2:72294938-72294957 | Msa0090330:five_prime_UTR | 45.0% | |
| CATTCAAAGGCCGGTAACTT+TGG | + | chr1_2:72294951-72294970 | None:intergenic | 45.0% | |
| ATGCCATAGGATGAAAGGAG+CGG | - | chr1_2:72294976-72294995 | Msa0090330:five_prime_UTR | 45.0% | |
| AAACCGCTCCTTTCATCCTA+TGG | + | chr1_2:72294982-72295001 | None:intergenic | 45.0% | |
| ! | TGGGGTGAGTTTAGGGTTTA+GGG | + | chr1_2:72295078-72295097 | None:intergenic | 45.0% |
| ! | TTGGGGTGAGTTTAGGGTTT+AGG | + | chr1_2:72295079-72295098 | None:intergenic | 45.0% |
| ! | CTGTCATTTGGGGTGAGTTT+AGG | + | chr1_2:72295086-72295105 | None:intergenic | 45.0% |
| CAAACTTGATCAAGTGGGTG+TGG | + | chr1_2:72295299-72295318 | None:intergenic | 45.0% | |
| CACACCCACTTGATCAAGTT+TGG | - | chr1_2:72295297-72295316 | Msa0090330:five_prime_UTR | 45.0% | |
| ATACCCAAAACGACGAGAGT+TGG | + | chr1_2:72293124-72293143 | None:intergenic | 45.0% | |
| GACCAAGAAACAACCGTTCT+TGG | + | chr1_2:72295423-72295442 | None:intergenic | 45.0% | |
| AAAGGTTCATGCCATGACTG+TGG | - | chr1_2:72295596-72295615 | Msa0090330:five_prime_UTR | 45.0% | |
| ATCACTAAACTGCCCGCATT+TGG | + | chr1_2:72295676-72295695 | None:intergenic | 45.0% | |
| CATGGCCTTCTAATGAAGCT+TGG | - | chr1_2:72295906-72295925 | Msa0090330:five_prime_UTR | 45.0% | |
| ! | TTCACCCAGACACTGTTTCT+TGG | - | chr1_2:72296024-72296043 | Msa0090330:five_prime_UTR | 45.0% |
| GCATTCCAAGAAACAGTGTC+TGG | + | chr1_2:72296032-72296051 | None:intergenic | 45.0% | |
| TGCAATGGGGTTGAAGGATT+TGG | - | chr1_2:72296175-72296194 | Msa0090330:five_prime_UTR | 45.0% | |
| GCAATGGGGTTGAAGGATTT+GGG | - | chr1_2:72296176-72296195 | Msa0090330:five_prime_UTR | 45.0% | |
| CAATGGGGTTGAAGGATTTG+GGG | - | chr1_2:72296177-72296196 | Msa0090330:five_prime_UTR | 45.0% | |
| AACTTGTCGGCATATGAGCA+AGG | - | chr1_2:72296785-72296804 | Msa0090330:five_prime_UTR | 45.0% | |
| ACTTGTCGGCATATGAGCAA+GGG | - | chr1_2:72296786-72296805 | Msa0090330:five_prime_UTR | 45.0% | |
| TCTCTGTGGTATCTCGGAAA+AGG | + | chr1_2:72296924-72296943 | None:intergenic | 45.0% | |
| ! | TTTTCCGAGATACCACAGAG+AGG | - | chr1_2:72296923-72296942 | Msa0090330:five_prime_UTR | 45.0% |
| CATGAGACTATACCTCTCTG+TGG | + | chr1_2:72296938-72296957 | None:intergenic | 45.0% | |
| ! | CACAGAGAGGTATAGTCTCA+TGG | - | chr1_2:72296936-72296955 | Msa0090330:five_prime_UTR | 45.0% |
| GTCTCATGGTCTGCAATGAT+TGG | - | chr1_2:72296950-72296969 | Msa0090330:five_prime_UTR | 45.0% | |
| TCATGGTCTGCAATGATTGG+AGG | - | chr1_2:72296953-72296972 | Msa0090330:five_prime_UTR | 45.0% | |
| CATGGTCTGCAATGATTGGA+GGG | - | chr1_2:72296954-72296973 | Msa0090330:five_prime_UTR | 45.0% | |
| ! | TGCATGTAATCACGCTGGTT+TGG | - | chr1_2:72297078-72297097 | Msa0090330:intron | 45.0% |
| !! | TCACGCTGGTTTGGTAAATG+AGG | - | chr1_2:72297087-72297106 | Msa0090330:intron | 45.0% |
| !! | CACGCTGGTTTGGTAAATGA+GGG | - | chr1_2:72297088-72297107 | Msa0090330:intron | 45.0% |
| !! | ACGCTGGTTTGGTAAATGAG+GGG | - | chr1_2:72297089-72297108 | Msa0090330:intron | 45.0% |
| CAAGCATAGTGCTCTTGTGT+TGG | + | chr1_2:72297157-72297176 | None:intergenic | 45.0% | |
| GCTTGCATGATTGATCTCCT+TGG | - | chr1_2:72297172-72297191 | Msa0090330:intron | 45.0% | |
| ! | TCCATTCCATTTGAAGCCGA+TGG | - | chr1_2:72297235-72297254 | Msa0090330:intron | 45.0% |
| !! | TCCATCGGCTTCAAATGGAA+TGG | + | chr1_2:72297239-72297258 | None:intergenic | 45.0% |
| !! | ACTCTAGAGCCAGACAAATC+TGG | - | chr1_2:72297340-72297359 | Msa0090330:intron | 45.0% |
| TTTATGCATCAGCAGGGATG+TGG | - | chr1_2:72297386-72297405 | Msa0090330:intron | 45.0% | |
| TTATGCATCAGCAGGGATGT+GGG | - | chr1_2:72297387-72297406 | Msa0090330:intron | 45.0% | |
| AGCAATGTGAAGAAGGAACC+TGG | - | chr1_2:72297445-72297464 | Msa0090330:intron | 45.0% | |
| AGAAGGAACCTGGAATGAGT+TGG | - | chr1_2:72297455-72297474 | Msa0090330:intron | 45.0% | |
| ! | ACCTGGAATGAGTTGGATTG+AGG | - | chr1_2:72297462-72297481 | Msa0090330:intron | 45.0% |
| ACCTCAATCCAACTCATTCC+AGG | + | chr1_2:72297466-72297485 | None:intergenic | 45.0% | |
| GTTGGATTGAGGTCAAAGAC+AGG | - | chr1_2:72297473-72297492 | Msa0090330:intron | 45.0% | |
| !! | TCACAGTGAGAAACTTGCTG+TGG | - | chr1_2:72297660-72297679 | Msa0090330:intron | 45.0% |
| !!! | GAGAAACTTGCTGTGGCTTT+TGG | - | chr1_2:72297667-72297686 | Msa0090330:intron | 45.0% |
| ! | GGATATGTTGTCGTGATGGA+GGG | + | chr1_2:72298100-72298119 | None:intergenic | 45.0% |
| TGGATATGTTGTCGTGATGG+AGG | + | chr1_2:72298101-72298120 | None:intergenic | 45.0% | |
| GGTTGGATATGTTGTCGTGA+TGG | + | chr1_2:72298104-72298123 | None:intergenic | 45.0% | |
| GACAACATATCCAACCTCAC+TGG | - | chr1_2:72298108-72298127 | Msa0090330:five_prime_UTR | 45.0% | |
| CCTCAGCAACAACTGGAAAT+TGG | + | chr1_2:72298160-72298179 | None:intergenic | 45.0% | |
| CCAATTTCCAGTTGTTGCTG+AGG | - | chr1_2:72298157-72298176 | Msa0090330:five_prime_UTR | 45.0% | |
| CAACAATCCTCAGCAACAAC+TGG | + | chr1_2:72298167-72298186 | None:intergenic | 45.0% | |
| AGCAGTTCTGTTGTCCCTTT+AGG | - | chr1_2:72298224-72298243 | Msa0090330:intron | 45.0% | |
| ! | GTTCAATAGCTTGTGATCGG+AGG | - | chr1_2:72298441-72298460 | Msa0090330:five_prime_UTR | 45.0% |
| GAGACAGTGTGGTCTAGATA+TGG | + | chr1_2:72298471-72298490 | None:intergenic | 45.0% | |
| TCCAACAAGATGGGGTGAAA+GGG | + | chr1_2:72298718-72298737 | None:intergenic | 45.0% | |
| TTCCAACAAGATGGGGTGAA+AGG | + | chr1_2:72298719-72298738 | None:intergenic | 45.0% | |
| CACCCCATCTTGTTGGAATA+TGG | - | chr1_2:72298721-72298740 | Msa0090330:intron | 45.0% | |
| GAAAGAAGAGATCGCAGAAG+TGG | - | chr1_2:72298771-72298790 | Msa0090330:intron | 45.0% | |
| ! | AGTGGAGCAATGGATGGATT+TGG | - | chr1_2:72298789-72298808 | Msa0090330:intron | 45.0% |
| ! | GAGCAATGGATGGATTTGGA+TGG | - | chr1_2:72298793-72298812 | Msa0090330:intron | 45.0% |
| TTGCAGGGAAAGAGCCAAAG+AGG | + | chr1_2:72292810-72292829 | None:intergenic | 50.0% | |
| ! | GTTTCTGAGAATTGGGTGGC+GGG | + | chr1_2:72293082-72293101 | None:intergenic | 50.0% |
| ! | GGTTTCTGAGAATTGGGTGG+CGG | + | chr1_2:72293083-72293102 | None:intergenic | 50.0% |
| TTCATGGGAATTGGAGGCCA+AGG | - | chr1_2:72293769-72293788 | Msa0090330:CDS | 50.0% | |
| TAAGGTCAGATCAGGCAACG+TGG | - | chr1_2:72294367-72294386 | Msa0090330:five_prime_UTR | 50.0% | |
| ! | TTACTGAAAGTGTGGGGTGC+TGG | - | chr1_2:72294417-72294436 | Msa0090330:five_prime_UTR | 50.0% |
| GGGTTACACTTTCGTCCTAC+TGG | - | chr1_2:72294531-72294550 | Msa0090330:five_prime_UTR | 50.0% | |
| GCAGAGAAGTTAGAGTCGCA+GGG | + | chr1_2:72295121-72295140 | None:intergenic | 50.0% | |
| AGCAGAGAAGTTAGAGTCGC+AGG | + | chr1_2:72295122-72295141 | None:intergenic | 50.0% | |
| !! | GTTTCTGAGACTTGAGTGGC+GGG | + | chr1_2:72295328-72295347 | None:intergenic | 50.0% |
| !! | GGTTTCTGAGACTTGAGTGG+CGG | + | chr1_2:72295329-72295348 | None:intergenic | 50.0% |
| ATGCCATGACTGTGGTCTCA+GGG | - | chr1_2:72295604-72295623 | Msa0090330:five_prime_UTR | 50.0% | |
| AAACCCTGAGACCACAGTCA+TGG | + | chr1_2:72295610-72295629 | None:intergenic | 50.0% | |
| TGAATGCCTGTGCTGGATTG+CGG | - | chr1_2:72295859-72295878 | Msa0090330:five_prime_UTR | 50.0% | |
| ATGTGCTGCAATGGGGTTGA+AGG | - | chr1_2:72296169-72296188 | Msa0090330:five_prime_UTR | 50.0% | |
| ATCTCTGGTTACTCGCAGTG+TGG | - | chr1_2:72296362-72296381 | Msa0090330:five_prime_UTR | 50.0% | |
| AGAGCGCACTTGGGAAGATT+TGG | - | chr1_2:72296625-72296644 | Msa0090330:five_prime_UTR | 50.0% | |
| TCAACATGGGGATGCAGAAG+AGG | - | chr1_2:72296679-72296698 | Msa0090330:five_prime_UTR | 50.0% | |
| GAACTGCAGACAAACGGATC+AGG | + | chr1_2:72296746-72296765 | None:intergenic | 50.0% | |
| GTCTGCAATGATTGGAGGGT+TGG | - | chr1_2:72296958-72296977 | Msa0090330:five_prime_UTR | 50.0% | |
| !! | ATTGGAGGGTTGGCTCAACA+TGG | - | chr1_2:72296968-72296987 | Msa0090330:five_prime_UTR | 50.0% |
| CTCTGTGCATGTAATCACGC+TGG | - | chr1_2:72297073-72297092 | Msa0090330:intron | 50.0% | |
| !! | ACGGATCCATCGGCTTCAAA+TGG | + | chr1_2:72297244-72297263 | None:intergenic | 50.0% |
| TTGAAGCCGATGGATCCGTT+TGG | - | chr1_2:72297245-72297264 | Msa0090330:intron | 50.0% | |
| TGAAGCCGATGGATCCGTTT+GGG | - | chr1_2:72297246-72297265 | Msa0090330:intron | 50.0% | |
| TTGGTGAGAAAGCTGCAGAG+AGG | - | chr1_2:72297311-72297330 | Msa0090330:intron | 50.0% | |
| GGATTAATTGCCACACCACC+TGG | - | chr1_2:72297688-72297707 | Msa0090330:intron | 50.0% | |
| ACTCTTATTGGAGCTCCAGG+TGG | + | chr1_2:72297706-72297725 | None:intergenic | 50.0% | |
| ACGAATGACACGGTAATCCG+TGG | - | chr1_2:72297950-72297969 | Msa0090330:intron | 50.0% | |
| ! | GTTGTCGTGATGGAGGGATA+TGG | + | chr1_2:72298094-72298113 | None:intergenic | 50.0% |
| CCATCGTCTTCACAACGGAA+AGG | + | chr1_2:72298134-72298153 | None:intergenic | 50.0% | |
| CCTTTCCGTTGTGAAGACGA+TGG | - | chr1_2:72298131-72298150 | Msa0090330:five_prime_UTR | 50.0% | |
| TGGAGGCAGTGATCGTTACT+TGG | - | chr1_2:72298201-72298220 | Msa0090330:intron | 50.0% | |
| TCTGAGCGACGAAGAAACGA+CGG | - | chr1_2:72298251-72298270 | Msa0090330:intron | 50.0% | |
| CTAGACCACACTGTCTCTTC+AGG | - | chr1_2:72298474-72298493 | Msa0090330:five_prime_UTR | 50.0% | |
| ! | ATTGGCCTGAAGAGACAGTG+TGG | + | chr1_2:72298482-72298501 | None:intergenic | 50.0% |
| CATTGGTCCTACAGGAAGGT+GGG | + | chr1_2:72298585-72298604 | None:intergenic | 50.0% | |
| ! | TGTGCATTGGTCCTACAGGA+AGG | + | chr1_2:72298589-72298608 | None:intergenic | 50.0% |
| ! | ACTGTGTGCATTGGTCCTAC+AGG | + | chr1_2:72298593-72298612 | None:intergenic | 50.0% |
| CCAACAAGATGGGGTGAAAG+GGG | + | chr1_2:72298717-72298736 | None:intergenic | 50.0% | |
| TGGCAGCAGTTATGCAGCAA+AGG | - | chr1_2:72298749-72298768 | Msa0090330:intron | 50.0% | |
| AGATCGCAGAAGTGGAGCAA+TGG | - | chr1_2:72298779-72298798 | Msa0090330:intron | 50.0% | |
| TTGGAACCGAGAGTCTCGTG+CGG | - | chr1_2:72292766-72292785 | Msa0090330:three_prime_UTR | 55.0% | |
| GAGAAACCGCACGAGACTCT+CGG | + | chr1_2:72292775-72292794 | None:intergenic | 55.0% | |
| AATACCTTCTCAGCCCCCGA+AGG | + | chr1_2:72294150-72294169 | None:intergenic | 55.0% | |
| CATGCCATGACTGTGGTCTC+AGG | - | chr1_2:72295603-72295622 | Msa0090330:five_prime_UTR | 55.0% | |
| GCATTCCACGAAACAACGCC+TGG | + | chr1_2:72295729-72295748 | None:intergenic | 55.0% | |
| GAATGCCTGTGCTGGATTGC+GGG | - | chr1_2:72295860-72295879 | Msa0090330:five_prime_UTR | 55.0% | |
| ! | GGATTGCGGGATGGAGGTAT+CGG | - | chr1_2:72295873-72295892 | Msa0090330:five_prime_UTR | 55.0% |
| !! | GGATGGAGGTATCGGAAGGA+CGG | - | chr1_2:72295881-72295900 | Msa0090330:five_prime_UTR | 55.0% |
| ! | GGTATCGGAAGGACGGTTCA+TGG | - | chr1_2:72295888-72295907 | Msa0090330:five_prime_UTR | 55.0% |
| GCAGGGAATGCTCTGATCTC+TGG | - | chr1_2:72296347-72296366 | Msa0090330:five_prime_UTR | 55.0% | |
| GCGCACTTGGGAAGATTTGG+TGG | - | chr1_2:72296628-72296647 | Msa0090330:five_prime_UTR | 55.0% | |
| !! | GGGTTGGCTCAACATGGTCA+TGG | - | chr1_2:72296974-72296993 | Msa0090330:intron | 55.0% |
| GAAGCCGATGGATCCGTTTG+GGG | - | chr1_2:72297247-72297266 | Msa0090330:intron | 55.0% | |
| AAGCCGATGGATCCGTTTGG+GGG | - | chr1_2:72297248-72297267 | Msa0090330:intron | 55.0% | |
| TATTGGAGCTCCAGGTGGTG+TGG | + | chr1_2:72297701-72297720 | None:intergenic | 55.0% | |
| AACGGAAAGGCCAGTGAGGT+TGG | + | chr1_2:72298121-72298140 | None:intergenic | 55.0% | |
| TCACAACGGAAAGGCCAGTG+AGG | + | chr1_2:72298125-72298144 | None:intergenic | 55.0% | |
| GGGCACCATCGTCTTCACAA+CGG | + | chr1_2:72298139-72298158 | None:intergenic | 55.0% | |
| GTCGCTCAGAGGCTCCTAAA+GGG | + | chr1_2:72298241-72298260 | None:intergenic | 55.0% | |
| GTCGTTTCTTCGTCGCTCAG+AGG | + | chr1_2:72298252-72298271 | None:intergenic | 55.0% | |
| ACGAAGAAACGACGGCTGTG+AGG | - | chr1_2:72298259-72298278 | Msa0090330:intron | 55.0% | |
| CGAAGAAACGACGGCTGTGA+GGG | - | chr1_2:72298260-72298279 | Msa0090330:intron | 55.0% | |
| ! | GCATTGGTCCTACAGGAAGG+TGG | + | chr1_2:72298586-72298605 | None:intergenic | 55.0% |
| CCCCTTTCACCCCATCTTGT+TGG | - | chr1_2:72298714-72298733 | Msa0090330:intron | 55.0% | |
| CGCAGAAGTGGAGCAATGGA+TGG | - | chr1_2:72298783-72298802 | Msa0090330:intron | 55.0% | |
| TGGAGGCCAAGGACCTTCCT+TGG | - | chr1_2:72293780-72293799 | Msa0090330:CDS | 60.0% | |
| TCTCAGCCCCCGAAGGTTTG+AGG | + | chr1_2:72294143-72294162 | None:intergenic | 60.0% | |
| CAAACCTTCGGGGGCTGAGA+AGG | - | chr1_2:72294143-72294162 | Msa0090330:CDS | 60.0% | |
| !! | TGAAAGTGTGGGGTGCTGGC+TGG | - | chr1_2:72294421-72294440 | Msa0090330:five_prime_UTR | 60.0% |
| ! | TGGAGCCAGGCGTTGTTTCG+TGG | - | chr1_2:72295721-72295740 | Msa0090330:five_prime_UTR | 60.0% |
| TCCATCCCGCAATCCAGCAC+AGG | + | chr1_2:72295868-72295887 | None:intergenic | 60.0% | |
| TGTGCTGGATTGCGGGATGG+AGG | - | chr1_2:72295867-72295886 | Msa0090330:five_prime_UTR | 60.0% | |
| !! | TGCGGGATGGAGGTATCGGA+AGG | - | chr1_2:72295877-72295896 | Msa0090330:five_prime_UTR | 60.0% |
| AGCCGATGGATCCGTTTGGG+GGG | - | chr1_2:72297249-72297268 | Msa0090330:intron | 60.0% | |
| !! | ACCAAGAAGCGCCCCCCAAA+CGG | + | chr1_2:72297263-72297282 | None:intergenic | 60.0% |
| CGTCGCTCAGAGGCTCCTAA+AGG | + | chr1_2:72298242-72298261 | None:intergenic | 60.0% | |
| GCCTGTGCTGGATTGCGGGA+TGG | - | chr1_2:72295864-72295883 | Msa0090330:five_prime_UTR | 65.0% | |
| CGCCCCCCAAACGGATCCAT+CGG | + | chr1_2:72297254-72297273 | None:intergenic | 65.0% | |
| !! | TCCGTTTGGGGGGCGCTTCT+TGG | - | chr1_2:72297259-72297278 | Msa0090330:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 72292715 | 72299520 | 72292715 | ID=Msa0090330;Name=Msa0090330 |
| chr1_2 | mRNA | 72292715 | 72299520 | 72292715 | ID=Msa0090330-mRNA-1;Parent=Msa0090330;Name=Msa0090330-mRNA-1;_AED=0.05;_eAED=0.05;_QI=3356|0.75|0.88|1|0.12|0.11|9|138|226 |
| chr1_2 | exon | 72292715 | 72292858 | 72292715 | ID=Msa0090330-mRNA-1:exon:25140;Parent=Msa0090330-mRNA-1 |
| chr1_2 | exon | 72293346 | 72293562 | 72293346 | ID=Msa0090330-mRNA-1:exon:25139;Parent=Msa0090330-mRNA-1 |
| chr1_2 | exon | 72293734 | 72293870 | 72293734 | ID=Msa0090330-mRNA-1:exon:25138;Parent=Msa0090330-mRNA-1 |
| chr1_2 | exon | 72293937 | 72296990 | 72293937 | ID=Msa0090330-mRNA-1:exon:25137;Parent=Msa0090330-mRNA-1 |
| chr1_2 | exon | 72297752 | 72297905 | 72297752 | ID=Msa0090330-mRNA-1:exon:25136;Parent=Msa0090330-mRNA-1 |
| chr1_2 | exon | 72298071 | 72298211 | 72298071 | ID=Msa0090330-mRNA-1:exon:25135;Parent=Msa0090330-mRNA-1 |
| chr1_2 | exon | 72298412 | 72298517 | 72298412 | ID=Msa0090330-mRNA-1:exon:25134;Parent=Msa0090330-mRNA-1 |
| chr1_2 | exon | 72298853 | 72298939 | 72298853 | ID=Msa0090330-mRNA-1:exon:25133;Parent=Msa0090330-mRNA-1 |
| chr1_2 | exon | 72299386 | 72299520 | 72299386 | ID=Msa0090330-mRNA-1:exon:25132;Parent=Msa0090330-mRNA-1 |
| chr1_2 | five_prime_UTR | 72299386 | 72299520 | 72299386 | ID=Msa0090330-mRNA-1:five_prime_utr;Parent=Msa0090330-mRNA-1 |
| chr1_2 | five_prime_UTR | 72298853 | 72298939 | 72298853 | ID=Msa0090330-mRNA-1:five_prime_utr;Parent=Msa0090330-mRNA-1 |
| chr1_2 | five_prime_UTR | 72298412 | 72298517 | 72298412 | ID=Msa0090330-mRNA-1:five_prime_utr;Parent=Msa0090330-mRNA-1 |
| chr1_2 | five_prime_UTR | 72298071 | 72298211 | 72298071 | ID=Msa0090330-mRNA-1:five_prime_utr;Parent=Msa0090330-mRNA-1 |
| chr1_2 | five_prime_UTR | 72297752 | 72297905 | 72297752 | ID=Msa0090330-mRNA-1:five_prime_utr;Parent=Msa0090330-mRNA-1 |
| chr1_2 | five_prime_UTR | 72294258 | 72296990 | 72294258 | ID=Msa0090330-mRNA-1:five_prime_utr;Parent=Msa0090330-mRNA-1 |
| chr1_2 | CDS | 72293937 | 72294257 | 72293937 | ID=Msa0090330-mRNA-1:cds;Parent=Msa0090330-mRNA-1 |
| chr1_2 | CDS | 72293734 | 72293870 | 72293734 | ID=Msa0090330-mRNA-1:cds;Parent=Msa0090330-mRNA-1 |
| chr1_2 | CDS | 72293346 | 72293562 | 72293346 | ID=Msa0090330-mRNA-1:cds;Parent=Msa0090330-mRNA-1 |
| chr1_2 | CDS | 72292853 | 72292858 | 72292853 | ID=Msa0090330-mRNA-1:cds;Parent=Msa0090330-mRNA-1 |
| chr1_2 | three_prime_UTR | 72292715 | 72292852 | 72292715 | ID=Msa0090330-mRNA-1:three_prime_utr;Parent=Msa0090330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
