AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1209460


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1209460 MtrunA17_Chr4g0058711 96.933 326 10 0 1 326 1 326 0.0 644
Msa1209460 MtrunA17_Chr3g0117171 69.811 318 91 3 1 317 1 314 9.42e-147 418
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1209460 AT3G54170.1 62.153 288 99 4 9 295 6 284 5.57e-119 346

Find 105 sgRNAs with CRISPR-Local

Find 582 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGGCTTGGTCTTGGGCT+TGG 0.160943 8_1:-67906976 None:intergenic
CTGAACAAAGAAATGAAAAT+TGG 0.191751 8_1:-67907000 None:intergenic
AAGGTAATTAATCACCAATT+TGG 0.198806 8_1:-67909143 None:intergenic
TACGATAGTTATAATTCTTA+TGG 0.214687 8_1:-67915838 None:intergenic
CTCAGCTTCTCTCCGATTCT+AGG 0.243687 8_1:+67907132 Msa1209460:five_prime_UTR
TTCGGCTTGGTCTTGGGCTT+GGG 0.252798 8_1:-67906975 None:intergenic
TGAAGAGTTTACGCGGTTAA+AGG 0.276638 8_1:+67912055 Msa1209460:CDS
ATGCTTTCTAGTACCCAAAT+TGG 0.286019 8_1:+67909129 Msa1209460:intron
CAACAGCAGGAATTTGATTT+CGG 0.289698 8_1:+67907269 Msa1209460:intron
ATTGGGCTTCGGCTTGGTCT+TGG 0.290145 8_1:-67906982 None:intergenic
CGATTTACCGGAACACGTTC+AGG 0.304950 8_1:+67907296 Msa1209460:CDS
TTCTACTTCAGCTGTCGTTT+TGG 0.332049 8_1:-67907580 None:intergenic
TTAACCGCGTAAACTCTTCA+TGG 0.336863 8_1:-67912052 None:intergenic
GAATTACGTCGTCGAGAGTT+GGG 0.342049 8_1:-67907180 None:intergenic
GCTTGAAAAGGCAAAGAAAA+AGG 0.349170 8_1:+67909306 Msa1209460:intron
GCAACTTCCCCATCTTGCTT+TGG 0.351234 8_1:-67913529 None:intergenic
TTGGGCTTCGGCTTGGTCTT+GGG 0.356924 8_1:-67906981 None:intergenic
ATTTGATCTTTCCACATCAT+TGG 0.357734 8_1:-67914860 None:intergenic
CAACTTCCCCATCTTGCTTT+GGG 0.360695 8_1:-67913528 None:intergenic
AGGTAATTAATCACCAATTT+GGG 0.361400 8_1:-67909142 None:intergenic
AGTAAAACCTGAACGTGTTC+CGG 0.389438 8_1:-67907303 None:intergenic
ATAGAATTTAGTTGCGGAAA+AGG 0.391098 8_1:+67913454 Msa1209460:intron
GAGCTCAGAAATCAATTTGA+AGG 0.391677 8_1:+67913974 Msa1209460:CDS
AAATAAAATGATAAACTAGT+AGG 0.395671 8_1:+67906897 None:intergenic
GCTGAAGTAGAAGCTGCTTC+TGG 0.396795 8_1:+67907591 Msa1209460:CDS
GATTCAGTCACGGTGGCGTA+TGG 0.400512 8_1:-67915869 None:intergenic
CTGATGATTTCAGTGCTTGA+AGG 0.408490 8_1:-67909162 None:intergenic
TACAGAGTTGCAGAAACATA+TGG 0.411106 8_1:+67914828 Msa1209460:intron
AGTAGGGTGGTCGAGAAGTA+TGG 0.415038 8_1:+67906914 Msa1209460:five_prime_UTR
CAAGAGGAAAATGAAGAGAT+TGG 0.415809 8_1:+67913575 Msa1209460:CDS
TGAACAAAGAAATGAAAATT+GGG 0.419985 8_1:-67906999 None:intergenic
AGTAGAGTCCTTAGCGGATC+AGG 0.430293 8_1:+67909183 Msa1209460:CDS
AGAATTACGTCGTCGAGAGT+TGG 0.443671 8_1:-67907181 None:intergenic
TTGGCTTGAGTTGAGCTTTG+AGG 0.443751 8_1:-67911029 None:intergenic
ATGAAAATTGGGCTTCGGCT+TGG 0.445291 8_1:-67906988 None:intergenic
ATTTGCTCTCCCGTTCTCTC+TGG 0.447211 8_1:-67915615 None:intergenic
CTGAGTGAAGTAGCTGTTGC+TGG 0.458633 8_1:-67907114 None:intergenic
TTTACTTCCCAAAGCAAGAT+GGG 0.460062 8_1:+67913521 Msa1209460:CDS
GATTTCGGAGAACGATTTAC+CGG 0.460869 8_1:+67907284 Msa1209460:CDS
AAGAAATGAAAATTGGGCTT+CGG 0.461713 8_1:-67906993 None:intergenic
TGGGGAAGACATGGTGAAGC+TGG 0.462098 8_1:-67907161 None:intergenic
CACAATACGAGATTCAGAAT+TGG 0.466801 8_1:+67908934 Msa1209460:CDS
AAGTAGCTGTTGCTGGTACT+TGG 0.471985 8_1:-67907107 None:intergenic
CAAATGCAGCACGTAATGCC+AGG 0.472508 8_1:+67915633 Msa1209460:exon
TCTTCTGCTGAATTTGATGA+TGG 0.474662 8_1:+67907428 Msa1209460:CDS
ACAATTTCAGTCTGCTGTAC+GGG 0.475571 8_1:+67911005 Msa1209460:intron
TTGCAGTCTTCAAGACTGTA+AGG 0.477309 8_1:+67907746 Msa1209460:intron
GCTGCTTCTGGTGTTACAAC+CGG 0.483880 8_1:+67907603 Msa1209460:CDS
AACAATTTCAGTCTGCTGTA+CGG 0.486423 8_1:+67911004 Msa1209460:intron
ATTTACTTCCCAAAGCAAGA+TGG 0.488868 8_1:+67913520 Msa1209460:CDS
GCGAAGAGACAAAATCATTC+CGG 0.489304 8_1:-67907622 None:intergenic
TCAGCTTCTCTCCGATTCTA+GGG 0.490433 8_1:+67907133 Msa1209460:five_prime_UTR
GATTGGGCTTCAAGCTTCTG+AGG 0.495982 8_1:+67913592 Msa1209460:CDS
CAAGATGGGGAAGTTGCTAA+TGG 0.504381 8_1:+67913535 Msa1209460:CDS
AAGAGGAAAATGAAGAGATT+GGG 0.505513 8_1:+67913576 Msa1209460:CDS
ATGTTCAACTCCATATGTTC+AGG 0.506370 8_1:+67915901 Msa1209460:three_prime_UTR
TAGATACTGTAAGTCATAAG+AGG 0.508307 8_1:+67907405 Msa1209460:intron
TAACCTGGTGTGGTCTCAGC+AGG 0.517448 8_1:-67908987 None:intergenic
TATGTTACCTTCTTTCCGTA+AGG 0.520035 8_1:-67907467 None:intergenic
AACAATACCTGCATTGATGT+TGG 0.525374 8_1:-67911048 None:intergenic
AATAAAATGATAAACTAGTA+GGG 0.529613 8_1:+67906898 None:intergenic
TATTTGTTATCAGCTTGAAA+AGG 0.532310 8_1:+67909294 Msa1209460:intron
GCTTCAAGCTTCTGAGGGAA+AGG 0.532560 8_1:+67913598 Msa1209460:CDS
TATATTTAAGAATGAACTTG+AGG 0.535382 8_1:+67908908 Msa1209460:intron
GTGGTCTCAGCAGGTATGAA+TGG 0.536045 8_1:-67908978 None:intergenic
GAAATGGTTAATTACTTCTG+TGG 0.537939 8_1:+67915723 Msa1209460:three_prime_UTR
TAATGATCCTTACGGAAAGA+AGG 0.539652 8_1:+67907460 Msa1209460:CDS
ATACCTGCTGAGACCACACC+AGG 0.539702 8_1:+67908984 Msa1209460:CDS
ATTCAGTCACGGTGGCGTAT+GGG 0.542914 8_1:-67915868 None:intergenic
AGTATCATCTCGTCAATCCC+TGG 0.546748 8_1:-67915651 None:intergenic
TATTTAAATTGCAGGCAAGA+AGG 0.559968 8_1:+67912009 Msa1209460:intron
AATTACGTCGTCGAGAGTTG+GGG 0.561904 8_1:-67907179 None:intergenic
TGTGGAAAGATCAAATGAAA+CGG 0.567946 8_1:+67914867 Msa1209460:CDS
GTAAACTCTTCATGGATCAC+TGG 0.570133 8_1:-67912044 None:intergenic
CTTGGGAGAGATGAAAATGA+GGG 0.573038 8_1:-67906958 None:intergenic
AGGGTGGTCGAGAAGTATGG+TGG 0.576529 8_1:+67906917 Msa1209460:five_prime_UTR
GGAAACGCTTGATTCGTGCT+TGG 0.577281 8_1:+67907767 Msa1209460:CDS
GCAAGGTAAATTAGACGAGA+AGG 0.580209 8_1:+67915546 Msa1209460:CDS
ATCATCAGTAGAGTCCTTAG+CGG 0.584514 8_1:+67909177 Msa1209460:CDS
GTTGCTGGTACTTGGAGTAG+AGG 0.585831 8_1:-67907099 None:intergenic
ATTGGGCTTCAAGCTTCTGA+GGG 0.585994 8_1:+67913593 Msa1209460:CDS
ACTCAAGCCAACATCAATGC+AGG 0.586843 8_1:+67911041 Msa1209460:CDS
CAGTCACGGTGGCGTATGGG+TGG 0.590923 8_1:-67915865 None:intergenic
GTCGAGAGTTGGGGAAGACA+TGG 0.592053 8_1:-67907170 None:intergenic
CTCATCATAGAATTTAGTTG+CGG 0.594727 8_1:+67913448 Msa1209460:intron
TAAATGTAAAACTCTGCAAG+AGG 0.603180 8_1:+67913559 Msa1209460:CDS
GGAAAAGGACACAAGACTAA+AGG 0.604232 8_1:+67913469 Msa1209460:CDS
TGGATTTGAGAAAATTGTTG+AGG 0.604732 8_1:+67915933 Msa1209460:three_prime_UTR
GGGTGGTCGAGAAGTATGGT+GGG 0.607491 8_1:+67906918 Msa1209460:five_prime_UTR
AACTGTGATTTACTATTGCT+AGG 0.621168 8_1:+67915811 Msa1209460:three_prime_UTR
GCTTGGGAGAGATGAAAATG+AGG 0.622456 8_1:-67906959 None:intergenic
TGAACATATGGAGTTGAACA+TGG 0.622874 8_1:-67915899 None:intergenic
GAGTTGCAGAAACATATGGA+TGG 0.624763 8_1:+67914832 Msa1209460:intron
ACGTACAAACTAACCTGGTG+TGG 0.625294 8_1:-67908997 None:intergenic
GGATGGATTGACCAATGATG+TGG 0.632932 8_1:+67914849 Msa1209460:CDS
GCAAGAGATAGCAAAGCTGA+AGG 0.638072 8_1:+67909363 Msa1209460:CDS
TTACTTCCCAAAGCAAGATG+GGG 0.638560 8_1:+67913522 Msa1209460:CDS
AAATGCAGCACGTAATGCCA+GGG 0.649838 8_1:+67915634 Msa1209460:exon
TTGGGAGAGATGAAAATGAG+GGG 0.653039 8_1:-67906957 None:intergenic
TGGGAGAGATGAAAATGAGG+GGG 0.656863 8_1:-67906956 None:intergenic
AAAATGATAAACTAGTAGGG+TGG 0.673724 8_1:+67906901 Msa1209460:five_prime_UTR
TGGTACTCATGATTCAGTCA+CGG 0.682177 8_1:-67915879 None:intergenic
TGTGATTTACTATTGCTAGG+TGG 0.700981 8_1:+67915814 Msa1209460:three_prime_UTR
TGATCCATGAAGAGTTTACG+CGG 0.721511 8_1:+67912048 Msa1209460:CDS
TACTCATGATTCAGTCACGG+TGG 0.745180 8_1:-67915876 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATCTTTAAAATATATTG+TGG + chr8_1:67910152-67910171 Msa1209460:intron 10.0%
!!! TTAAATCAATTTTGATTTTT+TGG + chr8_1:67912111-67912130 Msa1209460:intron 10.0%
!! ATAAATTAATATATATGTAG+CGG - chr8_1:67912495-67912514 None:intergenic 10.0%
!! TATATTAATTTATTTACAGA+AGG + chr8_1:67912502-67912521 Msa1209460:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr8_1:67911343-67911362 Msa1209460:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr8_1:67911343-67911362 Msa1209460:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr8_1:67911343-67911362 Msa1209460:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr8_1:67911343-67911362 Msa1209460:intron 100.0%
!! TAAATTGAAAATTGTAATGT+TGG + chr8_1:67907544-67907563 Msa1209460:intron 15.0%
!!! CTTTTAAATTATGTTATTGA+AGG + chr8_1:67908055-67908074 Msa1209460:intron 15.0%
!! TAAAAAAGAAATAATTTCTC+AGG - chr8_1:67909110-67909129 None:intergenic 15.0%
!! ATAAATATGATCAATGTATA+AGG - chr8_1:67909256-67909275 None:intergenic 15.0%
!!! AAAATCATTTTTCATGTTTT+AGG + chr8_1:67909803-67909822 Msa1209460:intron 15.0%
!! ATAGTATTAGTATTTAGTAT+TGG - chr8_1:67910289-67910308 None:intergenic 15.0%
!! AAAAAGATTCAATTAAAACA+CGG - chr8_1:67910401-67910420 None:intergenic 15.0%
!! ACCATAAACATATATTTAAT+GGG - chr8_1:67911839-67911858 None:intergenic 15.0%
!! TACCATAAACATATATTTAA+TGG - chr8_1:67911840-67911859 None:intergenic 15.0%
!!! TGTATTTTGATTTTCATTTT+AGG - chr8_1:67912528-67912547 None:intergenic 15.0%
!!! AAGAAAAAACACTTTTATTT+AGG + chr8_1:67912845-67912864 Msa1209460:intron 15.0%
!! ATAAACAATATTGACAAATT+AGG - chr8_1:67913861-67913880 None:intergenic 15.0%
!! TCAATGTATGTTTAAAAAAA+GGG - chr8_1:67914351-67914370 None:intergenic 15.0%
!! ATCAAAGATAAAAATAATGA+CGG + chr8_1:67914500-67914519 Msa1209460:intron 15.0%
!! TATTAACTTAGTAATGATAA+AGG + chr8_1:67914599-67914618 Msa1209460:intron 15.0%
!!! ATTAAAAGTTATGCAATTTT+TGG + chr8_1:67914755-67914774 Msa1209460:intron 15.0%
!! TGAACAAAGAAATGAAAATT+GGG - chr8_1:67907002-67907021 None:intergenic 20.0%
!!! ATTAACATGTGAATTTTTTG+AGG - chr8_1:67907334-67907353 None:intergenic 20.0%
!! TTACAGTATCTAATTCATAA+CGG - chr8_1:67907397-67907416 None:intergenic 20.0%
!!! AATTTTGATAATGATCCTTA+CGG + chr8_1:67907452-67907471 Msa1209460:CDS 20.0%
!!! AAAAATCCAGTAAGAATTTT+AGG - chr8_1:67907711-67907730 None:intergenic 20.0%
!!! GACAGATTTTATATACTTTA+GGG - chr8_1:67907926-67907945 None:intergenic 20.0%
!!! TGACAGATTTTATATACTTT+AGG - chr8_1:67907927-67907946 None:intergenic 20.0%
!!! TGACGGATTTTATATAATTT+AGG + chr8_1:67907981-67908000 Msa1209460:intron 20.0%
!!! GACGGATTTTATATAATTTA+GGG + chr8_1:67907982-67908001 Msa1209460:intron 20.0%
!! AATTATGTTATTGAAGGAAA+TGG + chr8_1:67908061-67908080 Msa1209460:intron 20.0%
!! AAAAAAATAGAGAAAACAGA+GGG - chr8_1:67908430-67908449 None:intergenic 20.0%
!! GAAATAAATAGAGAAAATAG+AGG - chr8_1:67908512-67908531 None:intergenic 20.0%
!! TATATTTAAGAATGAACTTG+AGG + chr8_1:67908908-67908927 Msa1209460:intron 20.0%
!!! ATAGAATTTTAGATTCTGAA+TGG - chr8_1:67909214-67909233 None:intergenic 20.0%
!!! TTCTATTTTTTGCTTCAAAA+TGG + chr8_1:67909228-67909247 Msa1209460:intron 20.0%
!! TAACAAATATAAATGTCGAA+GGG - chr8_1:67909283-67909302 None:intergenic 20.0%
!! ATAACAAATATAAATGTCGA+AGG - chr8_1:67909284-67909303 None:intergenic 20.0%
!! TTAATTATATATTCTCTCCT+GGG - chr8_1:67909472-67909491 None:intergenic 20.0%
!! TTAACAGAATAAGAAGAAAT+TGG + chr8_1:67909488-67909507 Msa1209460:intron 20.0%
!! AACATTGTATTAGAATCATT+GGG - chr8_1:67910636-67910655 None:intergenic 20.0%
!! TAACATTGTATTAGAATCAT+TGG - chr8_1:67910637-67910656 None:intergenic 20.0%
!! TGAAATGTGTTGTAATAATA+GGG - chr8_1:67910706-67910725 None:intergenic 20.0%
!!! TATTATTTTACAGATGTTAG+TGG + chr8_1:67910920-67910939 Msa1209460:intron 20.0%
!! TATGTTGTATGACATTTAAT+AGG + chr8_1:67911244-67911263 Msa1209460:intron 20.0%
!! TCCCATTAAATATATGTTTA+TGG + chr8_1:67911835-67911854 Msa1209460:intron 20.0%
!! TCTAAAAAGTTATCAAATAG+CGG + chr8_1:67911876-67911895 Msa1209460:intron 20.0%
!! ATAGGAGCTTATTATATTTA+GGG + chr8_1:67912367-67912386 Msa1209460:intron 20.0%
!!! GACATATTTTTTCTTCAAAT+GGG + chr8_1:67912389-67912408 Msa1209460:intron 20.0%
!!! ACATATTTTTTCTTCAAATG+GGG + chr8_1:67912390-67912409 Msa1209460:intron 20.0%
!! ATTGCTAACGTAAAAAATAT+AGG + chr8_1:67912460-67912479 Msa1209460:intron 20.0%
!!! AGAAATATTTTTTTCTCTCT+TGG - chr8_1:67912745-67912764 None:intergenic 20.0%
!! TCTTTAATTAATATGAAGCA+CGG - chr8_1:67912954-67912973 None:intergenic 20.0%
!! TGCTTCATATTAATTAAAGA+CGG + chr8_1:67912954-67912973 Msa1209460:intron 20.0%
!! GCAAAAAGAAATAAAAAAGA+AGG - chr8_1:67913895-67913914 None:intergenic 20.0%
!!! CTTTTTTATTTCTTTTTGCT+TGG + chr8_1:67913896-67913915 Msa1209460:intron 20.0%
!! CTCAATGTATGTTTAAAAAA+AGG - chr8_1:67914352-67914371 None:intergenic 20.0%
!! GTGTTAGATAATAAAGTATA+GGG - chr8_1:67914639-67914658 None:intergenic 20.0%
!! AGTGTTAGATAATAAAGTAT+AGG - chr8_1:67914640-67914659 None:intergenic 20.0%
!! ACTTAATAGTATTATTGTGT+GGG + chr8_1:67914657-67914676 Msa1209460:intron 20.0%
!! ATGTTATAAGATTGAAAACT+AGG + chr8_1:67914731-67914750 Msa1209460:intron 20.0%
!! TGTTATAAGATTGAAAACTA+GGG + chr8_1:67914732-67914751 Msa1209460:intron 20.0%
!! AATACAATTAACAAAGCTTA+GGG - chr8_1:67915293-67915312 None:intergenic 20.0%
!! AAATACAATTAACAAAGCTT+AGG - chr8_1:67915294-67915313 None:intergenic 20.0%
!!! ATTGTATTTCGCATTTTTTA+TGG + chr8_1:67915305-67915324 Msa1209460:intron 20.0%
!! TACGATAGTTATAATTCTTA+TGG - chr8_1:67915841-67915860 None:intergenic 20.0%
! CTGAACAAAGAAATGAAAAT+TGG - chr8_1:67907003-67907022 None:intergenic 25.0%
!! ATTCCAATAAACCATTGATT+TGG + chr8_1:67907840-67907859 Msa1209460:intron 25.0%
! TACATAATTTAGGGACTAAA+TGG - chr8_1:67907888-67907907 None:intergenic 25.0%
!!! TATTTTAGGGACTAAATTGA+TGG + chr8_1:67908026-67908045 Msa1209460:intron 25.0%
! ATATGCACATTAAATTCCTT+AGG - chr8_1:67908167-67908186 None:intergenic 25.0%
! CAAAAAAATAGAGAAAACAG+AGG - chr8_1:67908431-67908450 None:intergenic 25.0%
! TCTTTCCTAAAATTGTTTAC+TGG + chr8_1:67908878-67908897 Msa1209460:intron 25.0%
!! ATGATCCAGTAAACAATTTT+AGG - chr8_1:67908886-67908905 None:intergenic 25.0%
! AGGTAATTAATCACCAATTT+GGG - chr8_1:67909145-67909164 None:intergenic 25.0%
! AAGGTAATTAATCACCAATT+TGG - chr8_1:67909146-67909165 None:intergenic 25.0%
!!! TATTTGTTATCAGCTTGAAA+AGG + chr8_1:67909294-67909313 Msa1209460:intron 25.0%
! AAACTGTTCTTTATAGTATC+TGG + chr8_1:67909399-67909418 Msa1209460:intron 25.0%
! TAATTATATATTCTCTCCTG+GGG - chr8_1:67909471-67909490 None:intergenic 25.0%
! GTTAATTATATATTCTCTCC+TGG - chr8_1:67909473-67909492 None:intergenic 25.0%
!!! GGTGTTTTTTTTTTTTTGAG+AGG + chr8_1:67909824-67909843 Msa1209460:intron 25.0%
! TTACACACAAAATGATTCTT+GGG - chr8_1:67909887-67909906 None:intergenic 25.0%
! ATTACACACAAAATGATTCT+TGG - chr8_1:67909888-67909907 None:intergenic 25.0%
!! CATAAAAGAATGCTTTTAAC+AGG - chr8_1:67910038-67910057 None:intergenic 25.0%
!! TTTCAATTTGTCATTTATCG+AGG + chr8_1:67910175-67910194 Msa1209460:intron 25.0%
! TATTTGATTCTGTATTCAGT+TGG + chr8_1:67910237-67910256 Msa1209460:intron 25.0%
! ATTTGATTCTGTATTCAGTT+GGG + chr8_1:67910238-67910257 Msa1209460:intron 25.0%
!! CTTTTGTAATGACTAATAGT+TGG - chr8_1:67910340-67910359 None:intergenic 25.0%
! TTTGTTCAAAACTGTGTTAT+GGG - chr8_1:67910437-67910456 None:intergenic 25.0%
! ATTTGTTCAAAACTGTGTTA+TGG - chr8_1:67910438-67910457 None:intergenic 25.0%
!!! TTAGACAAGTTTTGATAACA+TGG + chr8_1:67910499-67910518 Msa1209460:intron 25.0%
! TAATAATAGGGTTTAGATAG+AGG - chr8_1:67910694-67910713 None:intergenic 25.0%
! GTGAAATGTGTTGTAATAAT+AGG - chr8_1:67910707-67910726 None:intergenic 25.0%
!!! ATTTTGAAACCAATTCATTC+TGG + chr8_1:67910766-67910785 Msa1209460:intron 25.0%
!! TCATGCATATTAATTTGAGA+AGG + chr8_1:67911135-67911154 Msa1209460:intron 25.0%
!! CATGCATATTAATTTGAGAA+GGG + chr8_1:67911136-67911155 Msa1209460:intron 25.0%
! AGTCATAAACAATATCTAAG+TGG - chr8_1:67911189-67911208 None:intergenic 25.0%
! AAGTGATTGCACAATATTAT+TGG + chr8_1:67911269-67911288 Msa1209460:intron 25.0%
! TGTGGTTGTTATCAATATTA+AGG + chr8_1:67911408-67911427 Msa1209460:intron 25.0%
!!! AACATTCATTTGAGTTTTGT+TGG + chr8_1:67911730-67911749 Msa1209460:intron 25.0%
! AAACATAAGGCAATAATTTC+GGG - chr8_1:67911983-67912002 None:intergenic 25.0%
! CAAACATAAGGCAATAATTT+CGG - chr8_1:67911984-67912003 None:intergenic 25.0%
! TTAAATAGCAACCAAACATA+AGG - chr8_1:67911996-67912015 None:intergenic 25.0%
! ATCAAATGGTCTAACATTAA+AGG - chr8_1:67912246-67912265 None:intergenic 25.0%
! AATAAGAACCCCAAATTAAA+GGG - chr8_1:67912285-67912304 None:intergenic 25.0%
! TAATAAGAACCCCAAATTAA+AGG - chr8_1:67912286-67912305 None:intergenic 25.0%
!!! TTTAATTTGGGGTTCTTATT+AGG + chr8_1:67912285-67912304 Msa1209460:intron 25.0%
!! TTAATTTGGGGTTCTTATTA+GGG + chr8_1:67912286-67912305 Msa1209460:intron 25.0%
! CATAGGAGCTTATTATATTT+AGG + chr8_1:67912366-67912385 Msa1209460:intron 25.0%
!!! GGACATATTTTTTCTTCAAA+TGG + chr8_1:67912388-67912407 Msa1209460:intron 25.0%
! TTCATATTAATTAAAGACGG+AGG + chr8_1:67912957-67912976 Msa1209460:intron 25.0%
! TCATATTAATTAAAGACGGA+GGG + chr8_1:67912958-67912977 Msa1209460:intron 25.0%
!! TTTTTGCGAAAAAAAGAGAA+AGG + chr8_1:67913012-67913031 Msa1209460:intron 25.0%
!! AGTTATCATTTTCATCTGTA+TGG - chr8_1:67913089-67913108 None:intergenic 25.0%
! AGATGAAAATGATAACTTCT+AGG + chr8_1:67913092-67913111 Msa1209460:intron 25.0%
!! CTTTAATTTCAGTGATGAAT+CGG + chr8_1:67913168-67913187 Msa1209460:intron 25.0%
! CTAATATATGTAGGAAATTG+GGG - chr8_1:67913353-67913372 None:intergenic 25.0%
! CCTAATATATGTAGGAAATT+GGG - chr8_1:67913354-67913373 None:intergenic 25.0%
! TCCTAATATATGTAGGAAAT+TGG - chr8_1:67913355-67913374 None:intergenic 25.0%
! TTCCTACATATATTAGGAAT+TGG + chr8_1:67913357-67913376 Msa1209460:intron 25.0%
! AACCAATTCCTAATATATGT+AGG - chr8_1:67913362-67913381 None:intergenic 25.0%
! AACTGAGAAAACAAAGTTTA+TGG + chr8_1:67913775-67913794 Msa1209460:intron 25.0%
! AGTTTATGGTATTTATTGAC+TGG + chr8_1:67913789-67913808 Msa1209460:intron 25.0%
! TAGCCATGTAATGATATAAA+GGG - chr8_1:67914053-67914072 None:intergenic 25.0%
! TGTTTCTTCTGTTACTATAT+TGG + chr8_1:67914086-67914105 Msa1209460:intron 25.0%
! TAAACATACATTGAGAATAG+AGG + chr8_1:67914155-67914174 Msa1209460:intron 25.0%
! AAACATACATTGAGAATAGA+GGG + chr8_1:67914156-67914175 Msa1209460:intron 25.0%
! TATTGAGAAAATTACATGTG+TGG + chr8_1:67914403-67914422 Msa1209460:intron 25.0%
! ATTGAGAAAATTACATGTGT+GGG + chr8_1:67914404-67914423 Msa1209460:intron 25.0%
! CAATAGCTTAATACTACAAA+AGG + chr8_1:67914544-67914563 Msa1209460:intron 25.0%
! TACTAAGTTAATAGTCTGTT+AGG - chr8_1:67914592-67914611 None:intergenic 25.0%
! CACTTAATAGTATTATTGTG+TGG + chr8_1:67914656-67914675 Msa1209460:intron 25.0%
! CACAGTAAAATATGAAAGTA+GGG - chr8_1:67914904-67914923 None:intergenic 25.0%
! TCACAGTAAAATATGAAAGT+AGG - chr8_1:67914905-67914924 None:intergenic 25.0%
!!! ATGAAGATAAGCATTGTTTT+AGG + chr8_1:67915004-67915023 Msa1209460:intron 25.0%
!! TCAACAAAACTTTTGTCTTA+GGG + chr8_1:67915043-67915062 Msa1209460:intron 25.0%
! TTTGAGTGATAAGAAAATCA+TGG + chr8_1:67915171-67915190 Msa1209460:intron 25.0%
! TTGAGTGATAAGAAAATCAT+GGG + chr8_1:67915172-67915191 Msa1209460:intron 25.0%
! ATACAATTAACAAAGCTTAG+GGG - chr8_1:67915292-67915311 None:intergenic 25.0%
! ATGTTTGTATTGTGTAAATG+TGG + chr8_1:67915336-67915355 Msa1209460:intron 25.0%
!!! TTTTATGCCGTTATTTTTCA+AGG + chr8_1:67915371-67915390 Msa1209460:intron 25.0%
!!! TTTATGCCGTTATTTTTCAA+GGG + chr8_1:67915372-67915391 Msa1209460:intron 25.0%
! ACAATTAAACAAGAATACGA+TGG - chr8_1:67915473-67915492 None:intergenic 25.0%
!! TATTCTTGTTTAATTGTCCA+AGG + chr8_1:67915476-67915495 Msa1209460:intron 25.0%
!! AGATTTTAAACAGATATCAC+TGG + chr8_1:67915679-67915698 Msa1209460:three_prime_UTR 25.0%
!!! GACTTCAATTTTTTTGTTGT+CGG + chr8_1:67915701-67915720 Msa1209460:three_prime_UTR 25.0%
!!! AATTTTTTTGTTGTCGGAAA+TGG + chr8_1:67915707-67915726 Msa1209460:three_prime_UTR 25.0%
AAAATGATAAACTAGTAGGG+TGG + chr8_1:67906901-67906920 Msa1209460:five_prime_UTR 30.0%
AAGAAATGAAAATTGGGCTT+CGG - chr8_1:67906996-67907015 None:intergenic 30.0%
TATCTAATTCATAACGGTGA+AGG - chr8_1:67907391-67907410 None:intergenic 30.0%
TAGATACTGTAAGTCATAAG+AGG + chr8_1:67907405-67907424 Msa1209460:intron 30.0%
TTTCAGCCTAAAATTCTTAC+TGG + chr8_1:67907702-67907721 Msa1209460:intron 30.0%
! ATAGTTTAGGACCAAATCAA+TGG - chr8_1:67907854-67907873 None:intergenic 30.0%
GATGTTAAGGACTAAATTGA+CGG + chr8_1:67907964-67907983 Msa1209460:intron 30.0%
TAGATGAATCTAACCCTAAA+TGG - chr8_1:67908218-67908237 None:intergenic 30.0%
! TTTAGGGTTAGATTCATCTA+TGG + chr8_1:67908218-67908237 Msa1209460:intron 30.0%
CGAAAAAACAGAGAAAATAG+AGG - chr8_1:67908471-67908490 None:intergenic 30.0%
!!! ATTTTCTCTGTTTTTTCGCT+CGG + chr8_1:67908473-67908492 Msa1209460:intron 30.0%
AGTTACATGTATAACAGTCT+AGG + chr8_1:67908708-67908727 Msa1209460:intron 30.0%
GGAAAGAAAAAGCTATAACT+AGG - chr8_1:67908865-67908884 None:intergenic 30.0%
AATTATATATTCTCTCCTGG+GGG - chr8_1:67909470-67909489 None:intergenic 30.0%
GTATTGCTTGAAAGATAAGA+TGG - chr8_1:67909956-67909975 None:intergenic 30.0%
AATATAAGCTCCGTAAAACA+TGG - chr8_1:67909999-67910018 None:intergenic 30.0%
AATACTATAACCAGTACTCT+AGG + chr8_1:67910301-67910320 Msa1209460:intron 30.0%
AAGATTCAATTAAAACACGG+TGG - chr8_1:67910398-67910417 None:intergenic 30.0%
CACATTTCACAATTCGTTAT+AGG + chr8_1:67910717-67910736 Msa1209460:intron 30.0%
AATTCGTTATAGGAACTGTA+TGG + chr8_1:67910727-67910746 Msa1209460:intron 30.0%
ATCAAGACTCAACAATCATA+TGG - chr8_1:67910811-67910830 None:intergenic 30.0%
! ACTTTCATTTTCCATATGTC+AGG + chr8_1:67910847-67910866 Msa1209460:intron 30.0%
AAATACAAACACCTGACATA+TGG - chr8_1:67910861-67910880 None:intergenic 30.0%
GATACACTCAAATACTTGTA+TGG - chr8_1:67911076-67911095 None:intergenic 30.0%
TTATTGGATGATTTCATGCT+AGG + chr8_1:67911285-67911304 Msa1209460:intron 30.0%
!!! CGCTTATTTTATTCTTGTCT+TGG - chr8_1:67911379-67911398 None:intergenic 30.0%
TCAAATGAATGTTCTAGCAT+GGG - chr8_1:67911723-67911742 None:intergenic 30.0%
CGAAATTATTGCCTTATGTT+TGG + chr8_1:67911982-67912001 Msa1209460:intron 30.0%
!! TTGGTTGCTATTTAAATTGC+AGG + chr8_1:67912001-67912020 Msa1209460:intron 30.0%
TATTTAAATTGCAGGCAAGA+AGG + chr8_1:67912009-67912028 Msa1209460:intron 30.0%
!!! TTGATTTTTTGGCATGAAGT+CGG + chr8_1:67912122-67912141 Msa1209460:intron 30.0%
!!! TCGGGTAAATGTTTTAATTC+AGG + chr8_1:67912141-67912160 Msa1209460:intron 30.0%
ATAAAACTATGACGACAACA+TGG - chr8_1:67912188-67912207 None:intergenic 30.0%
TAATGTTAGACCATTTGATG+AGG + chr8_1:67912247-67912266 Msa1209460:intron 30.0%
AATGTTAGACCATTTGATGA+GGG + chr8_1:67912248-67912267 Msa1209460:intron 30.0%
! TAATTTGGGGTTCTTATTAG+GGG + chr8_1:67912287-67912306 Msa1209460:intron 30.0%
CAAACATAGCCCTTATTAAT+GGG - chr8_1:67912315-67912334 None:intergenic 30.0%
TAATATATATGTAGCGGTGT+CGG - chr8_1:67912489-67912508 None:intergenic 30.0%
TTGAGAAACGTTGATCAATT+AGG - chr8_1:67912689-67912708 None:intergenic 30.0%
ACATATGTATCTCGTGTATA+CGG + chr8_1:67912710-67912729 Msa1209460:intron 30.0%
TATGAGTGTTATATAGGTGT+CGG + chr8_1:67912797-67912816 Msa1209460:intron 30.0%
AAAAAAGAGAAAGGTGGAAA+TGG + chr8_1:67913021-67913040 Msa1209460:intron 30.0%
AAAAAGAGAAAGGTGGAAAT+GGG + chr8_1:67913022-67913041 Msa1209460:intron 30.0%
! TTCTCTCTAGTTTGATTATC+TGG + chr8_1:67913051-67913070 Msa1209460:intron 30.0%
AAATGATAACTTCTAGGTGT+TGG + chr8_1:67913098-67913117 Msa1209460:intron 30.0%
AATGATAACTTCTAGGTGTT+GGG + chr8_1:67913099-67913118 Msa1209460:intron 30.0%
ATAAGTTTCTGAGTTGTGTT+TGG + chr8_1:67913202-67913221 Msa1209460:intron 30.0%
CCCAATTTCCTACATATATT+AGG + chr8_1:67913351-67913370 Msa1209460:intron 30.0%
TATAGACGCATTATTCACAT+TGG + chr8_1:67913390-67913409 Msa1209460:intron 30.0%
! GAAGTCTTGTAAAAAAGAGT+TGG - chr8_1:67913424-67913443 None:intergenic 30.0%
CTCATCATAGAATTTAGTTG+CGG + chr8_1:67913448-67913467 Msa1209460:intron 30.0%
ATAGAATTTAGTTGCGGAAA+AGG + chr8_1:67913454-67913473 Msa1209460:intron 30.0%
TAAATGTAAAACTCTGCAAG+AGG + chr8_1:67913559-67913578 Msa1209460:CDS 30.0%
AAGAGGAAAATGAAGAGATT+GGG + chr8_1:67913576-67913595 Msa1209460:CDS 30.0%
TACCTCATTCATTTCAAAGT+TGG + chr8_1:67913679-67913698 Msa1209460:intron 30.0%
!! AACCAACTTTGAAATGAATG+AGG - chr8_1:67913684-67913703 None:intergenic 30.0%
ACAGCAGATATATAGAATGT+GGG - chr8_1:67913715-67913734 None:intergenic 30.0%
TACAGCAGATATATAGAATG+TGG - chr8_1:67913716-67913735 None:intergenic 30.0%
TGAGTGATTTCATCACATTA+TGG + chr8_1:67914005-67914024 Msa1209460:intron 30.0%
GATTTCATCACATTATGGTT+TGG + chr8_1:67914010-67914029 Msa1209460:intron 30.0%
TGACCCTTTATATCATTACA+TGG + chr8_1:67914047-67914066 Msa1209460:intron 30.0%
GTAGCCATGTAATGATATAA+AGG - chr8_1:67914054-67914073 None:intergenic 30.0%
TATATCATTACATGGCTACT+TGG + chr8_1:67914055-67914074 Msa1209460:intron 30.0%
CTATATTGGATTCATCAAAC+AGG + chr8_1:67914100-67914119 Msa1209460:intron 30.0%
AACATACATTGAGAATAGAG+GGG + chr8_1:67914157-67914176 Msa1209460:intron 30.0%
AGATAAAAATAATGACGGCT+AGG + chr8_1:67914505-67914524 Msa1209460:intron 30.0%
GATAAAAATAATGACGGCTA+GGG + chr8_1:67914506-67914525 Msa1209460:intron 30.0%
CAAAATGTTAAATGTTCTGC+AGG + chr8_1:67914693-67914712 Msa1209460:intron 30.0%
AACTCTGTAGAAAATGCTAA+GGG - chr8_1:67914817-67914836 None:intergenic 30.0%
ATTTGATCTTTCCACATCAT+TGG - chr8_1:67914863-67914882 None:intergenic 30.0%
TGTGGAAAGATCAAATGAAA+CGG + chr8_1:67914867-67914886 Msa1209460:CDS 30.0%
!!! TTGTTTTAGGAAACCCTTTA+AGG + chr8_1:67915017-67915036 Msa1209460:intron 30.0%
!!! CTAAGACAAAAGTTTTGTTG+AGG - chr8_1:67915044-67915063 None:intergenic 30.0%
! CTCAACAAAACTTTTGTCTT+AGG + chr8_1:67915042-67915061 Msa1209460:intron 30.0%
! AAACTTTTGTCTTAGGGAAA+AGG + chr8_1:67915049-67915068 Msa1209460:intron 30.0%
CACAGATGCTAATATGAAAT+AGG + chr8_1:67915083-67915102 Msa1209460:intron 30.0%
!! TTTGTTATTATTTCGCCAGA+GGG - chr8_1:67915208-67915227 None:intergenic 30.0%
AAGTGCTTGTGTAGATAATA+TGG + chr8_1:67915226-67915245 Msa1209460:intron 30.0%
GAAATGGTTAATTACTTCTG+TGG + chr8_1:67915723-67915742 Msa1209460:three_prime_UTR 30.0%
AACTGTGATTTACTATTGCT+AGG + chr8_1:67915811-67915830 Msa1209460:three_prime_UTR 30.0%
AGCAAAAAATCCTGAACATA+TGG - chr8_1:67915914-67915933 None:intergenic 30.0%
!!! ATATGTTCAGGATTTTTTGC+TGG + chr8_1:67915913-67915932 Msa1209460:three_prime_UTR 30.0%
! CAACAGCAGGAATTTGATTT+CGG + chr8_1:67907269-67907288 Msa1209460:intron 35.0%
TCTTCTGCTGAATTTGATGA+TGG + chr8_1:67907428-67907447 Msa1209460:CDS 35.0%
TAATGATCCTTACGGAAAGA+AGG + chr8_1:67907460-67907479 Msa1209460:CDS 35.0%
TATGTTACCTTCTTTCCGTA+AGG - chr8_1:67907470-67907489 None:intergenic 35.0%
!!! GTAATGTTGGCTCATGTTTT+AGG + chr8_1:67907557-67907576 Msa1209460:intron 35.0%
GGACCAAATCAATGGTTTAT+TGG - chr8_1:67907846-67907865 None:intergenic 35.0%
GGAAGTGAATGTGATAGTTT+AGG - chr8_1:67907867-67907886 None:intergenic 35.0%
AGTCCTTCTGTAAGATGTTA+AGG + chr8_1:67907951-67907970 Msa1209460:intron 35.0%
AGTCCTTAACATCTTACAGA+AGG - chr8_1:67907957-67907976 None:intergenic 35.0%
TTAGGGACTGAATTAGAGAA+AGG + chr8_1:67907999-67908018 Msa1209460:intron 35.0%
TAGGGACTGAATTAGAGAAA+GGG + chr8_1:67908000-67908019 Msa1209460:intron 35.0%
! TAGAGAAAGGGTGGTATTTT+AGG + chr8_1:67908012-67908031 Msa1209460:intron 35.0%
! AGAGAAAGGGTGGTATTTTA+GGG + chr8_1:67908013-67908032 Msa1209460:intron 35.0%
! CAAAACATGTTTGTTGCCTA+AGG + chr8_1:67908148-67908167 Msa1209460:intron 35.0%
CTCGAAATGTCAATACAAAC+AGG + chr8_1:67908192-67908211 Msa1209460:intron 35.0%
TCAATACAAACAGGCCATTT+AGG + chr8_1:67908201-67908220 Msa1209460:intron 35.0%
CAATACAAACAGGCCATTTA+GGG + chr8_1:67908202-67908221 Msa1209460:intron 35.0%
TGTGAACTCTATGAATCATG+TGG + chr8_1:67908262-67908281 Msa1209460:intron 35.0%
GTGAACTCTATGAATCATGT+GGG + chr8_1:67908263-67908282 Msa1209460:intron 35.0%
AGCAAAAAACAGAGGAAACA+GGG - chr8_1:67908402-67908421 None:intergenic 35.0%
GAGAAAATAGAGGAAAACAG+AGG - chr8_1:67908461-67908480 None:intergenic 35.0%
GAGTTCACGTAACTAATTGT+TGG + chr8_1:67908668-67908687 Msa1209460:intron 35.0%
AGGTGTAAACATATCCTCTA+CGG + chr8_1:67908728-67908747 Msa1209460:intron 35.0%
! AGATAATTTTCCAACCGTAG+AGG - chr8_1:67908745-67908764 None:intergenic 35.0%
CACAATACGAGATTCAGAAT+TGG + chr8_1:67908934-67908953 Msa1209460:CDS 35.0%
AATTCACGTACAAACTAACC+TGG - chr8_1:67909005-67909024 None:intergenic 35.0%
! ATGCTTTCTAGTACCCAAAT+TGG + chr8_1:67909129-67909148 Msa1209460:intron 35.0%
GCTTGAAAAGGCAAAGAAAA+AGG + chr8_1:67909306-67909325 Msa1209460:intron 35.0%
AGAAGAAATTGGAGTGTAGT+TGG + chr8_1:67909499-67909518 Msa1209460:intron 35.0%
! TGCTAAAGCAACGCTTATTT+TGG - chr8_1:67909660-67909679 None:intergenic 35.0%
AAGTAAAACGACACTTGTCT+GGG - chr8_1:67909696-67909715 None:intergenic 35.0%
AAAGTAAAACGACACTTGTC+TGG - chr8_1:67909697-67909716 None:intergenic 35.0%
TGTTATACTAACTAGCACCT+CGG + chr8_1:67909913-67909932 Msa1209460:intron 35.0%
! TACTTTCCAGCCATGTTTTA+CGG + chr8_1:67909986-67910005 Msa1209460:intron 35.0%
TGAGCTTAAATCATAAGCAG+TGG + chr8_1:67910059-67910078 Msa1209460:intron 35.0%
!! TAAAACACGGTGGTTACTTT+TGG - chr8_1:67910388-67910407 None:intergenic 35.0%
GTTTCAAAATTCCTGACTCT+TGG - chr8_1:67910756-67910775 None:intergenic 35.0%
GACTCAACAATCATATGGAA+AGG - chr8_1:67910806-67910825 None:intergenic 35.0%
AACAATTTCAGTCTGCTGTA+CGG + chr8_1:67911004-67911023 Msa1209460:intron 35.0%
! AACAATACCTGCATTGATGT+TGG - chr8_1:67911051-67911070 None:intergenic 35.0%
CTAAGTGGATCAACAAAGTT+TGG - chr8_1:67911174-67911193 None:intergenic 35.0%
! ATTGATAACAACCACATCTC+TGG - chr8_1:67911404-67911423 None:intergenic 35.0%
AGCACCTATTGTAGAAAAGA+TGG + chr8_1:67911444-67911463 Msa1209460:intron 35.0%
! CCTACCATCTTTTCTACAAT+AGG - chr8_1:67911451-67911470 None:intergenic 35.0%
CCTATTGTAGAAAAGATGGT+AGG + chr8_1:67911448-67911467 Msa1209460:intron 35.0%
TAGAAAAGATGGTAGGAACT+CGG + chr8_1:67911455-67911474 Msa1209460:intron 35.0%
AGGATCTAGAGATTAATGAG+TGG + chr8_1:67911607-67911626 Msa1209460:intron 35.0%
GGATCTAGAGATTAATGAGT+GGG + chr8_1:67911608-67911627 Msa1209460:intron 35.0%
CTCAAATGAATGTTCTAGCA+TGG - chr8_1:67911724-67911743 None:intergenic 35.0%
TATGTGTTCATCAAGACTTG+TGG + chr8_1:67911762-67911781 Msa1209460:intron 35.0%
! ACCAAGCTTTTATTCCCTTA+TGG + chr8_1:67911954-67911973 Msa1209460:intron 35.0%
! CCAAGCTTTTATTCCCTTAT+GGG + chr8_1:67911955-67911974 Msa1209460:intron 35.0%
!!! TGATTTTTTGGCATGAAGTC+GGG + chr8_1:67912123-67912142 Msa1209460:intron 35.0%
TGTTTCTTCACTGTATCTCT+GGG - chr8_1:67912214-67912233 None:intergenic 35.0%
ATGTTTCTTCACTGTATCTC+TGG - chr8_1:67912215-67912234 None:intergenic 35.0%
! GTCTATGGTCCCTTTAATTT+GGG + chr8_1:67912273-67912292 Msa1209460:intron 35.0%
!! TCTATGGTCCCTTTAATTTG+GGG + chr8_1:67912274-67912293 Msa1209460:intron 35.0%
CCAAACATAGCCCTTATTAA+TGG - chr8_1:67912316-67912335 None:intergenic 35.0%
CCATTAATAAGGGCTATGTT+TGG + chr8_1:67912313-67912332 Msa1209460:intron 35.0%
AAGCTCCTATGCAAATTACT+AGG - chr8_1:67912357-67912376 None:intergenic 35.0%
AGAAACGTTGATCAATTAGG+AGG - chr8_1:67912686-67912705 None:intergenic 35.0%
GGCTCATATGAGTGTTATAT+AGG + chr8_1:67912791-67912810 Msa1209460:intron 35.0%
GAGTACATTAGAGAAGGAAA+TGG + chr8_1:67912980-67912999 Msa1209460:intron 35.0%
TTGCGAAAAAAAGAGAAAGG+TGG + chr8_1:67913015-67913034 Msa1209460:intron 35.0%
! ATGATAACTTCTAGGTGTTG+GGG + chr8_1:67913100-67913119 Msa1209460:intron 35.0%
! GGTGGTGTTAAATGTATAAC+AGG + chr8_1:67913121-67913140 Msa1209460:intron 35.0%
AATTTCAGTGATGAATCGGA+AGG + chr8_1:67913172-67913191 Msa1209460:intron 35.0%
AATCGAGACACAGTAAATGT+GGG - chr8_1:67913262-67913281 None:intergenic 35.0%
AAATCGAGACACAGTAAATG+TGG - chr8_1:67913263-67913282 None:intergenic 35.0%
! GTCTCGATTTCTTTTTCTTG+TGG + chr8_1:67913273-67913292 Msa1209460:intron 35.0%
ATTTACTTCCCAAAGCAAGA+TGG + chr8_1:67913520-67913539 Msa1209460:CDS 35.0%
TTTACTTCCCAAAGCAAGAT+GGG + chr8_1:67913521-67913540 Msa1209460:CDS 35.0%
CAAGAGGAAAATGAAGAGAT+TGG + chr8_1:67913575-67913594 Msa1209460:CDS 35.0%
AGATATATAGAATGTGGGGA+GGG - chr8_1:67913710-67913729 None:intergenic 35.0%
CAGCAGATATATAGAATGTG+GGG - chr8_1:67913714-67913733 None:intergenic 35.0%
GAGCTCAGAAATCAATTTGA+AGG + chr8_1:67913974-67913993 Msa1209460:CDS 35.0%
TGTTTAAAAAAAGGGCAACC+CGG - chr8_1:67914343-67914362 None:intergenic 35.0%
GGGAAATAATTCCCTATTAG+AGG - chr8_1:67914432-67914451 None:intergenic 35.0%
AGCAATACACTCTAAACTCT+GGG - chr8_1:67914452-67914471 None:intergenic 35.0%
TAGCAATACACTCTAAACTC+TGG - chr8_1:67914453-67914472 None:intergenic 35.0%
AGTATAGGGCTTAAGCTATT+GGG - chr8_1:67914625-67914644 None:intergenic 35.0%
AAGTATAGGGCTTAAGCTAT+TGG - chr8_1:67914626-67914645 None:intergenic 35.0%
TAGTATTATTGTGTGGGACT+TGG + chr8_1:67914663-67914682 Msa1209460:intron 35.0%
AGTATTATTGTGTGGGACTT+GGG + chr8_1:67914664-67914683 Msa1209460:intron 35.0%
CAACTCTGTAGAAAATGCTA+AGG - chr8_1:67914818-67914837 None:intergenic 35.0%
TACAGAGTTGCAGAAACATA+TGG + chr8_1:67914828-67914847 Msa1209460:intron 35.0%
!! GTTTTGTTGAGGTCCTTAAA+GGG - chr8_1:67915033-67915052 None:intergenic 35.0%
!!! AGTTTTGTTGAGGTCCTTAA+AGG - chr8_1:67915034-67915053 None:intergenic 35.0%
CTTAGGGAAAAGGCTTATAT+TGG + chr8_1:67915059-67915078 Msa1209460:intron 35.0%
TGCAGATACAGAGTGATATA+AGG + chr8_1:67915117-67915136 Msa1209460:intron 35.0%
! TTGTTATTATTTCGCCAGAG+GGG - chr8_1:67915207-67915226 None:intergenic 35.0%
!! CTTTGTTATTATTTCGCCAG+AGG - chr8_1:67915209-67915228 None:intergenic 35.0%
!!! TTCGCATTTTTTATGGCGTT+AGG + chr8_1:67915312-67915331 Msa1209460:intron 35.0%
ACGAAGCCCTTGAAAAATAA+CGG - chr8_1:67915381-67915400 None:intergenic 35.0%
TGTATGTGTGTCTTAGTCAT+TGG + chr8_1:67915500-67915519 Msa1209460:intron 35.0%
GTATGTGTGTCTTAGTCATT+GGG + chr8_1:67915501-67915520 Msa1209460:intron 35.0%
AAAAAAAGCTCCAGAGAGAA+CGG + chr8_1:67915605-67915624 Msa1209460:CDS 35.0%
TGTGATTTACTATTGCTAGG+TGG + chr8_1:67915814-67915833 Msa1209460:three_prime_UTR 35.0%
TGAACATATGGAGTTGAACA+TGG - chr8_1:67915902-67915921 None:intergenic 35.0%
ATGTTCAACTCCATATGTTC+AGG + chr8_1:67915901-67915920 Msa1209460:three_prime_UTR 35.0%
TTGGGAGAGATGAAAATGAG+GGG - chr8_1:67906960-67906979 None:intergenic 40.0%
CTTGGGAGAGATGAAAATGA+GGG - chr8_1:67906961-67906980 None:intergenic 40.0%
TCTGACGCGAAGTTGAAAAA+CGG - chr8_1:67907075-67907094 None:intergenic 40.0%
AGCTGGAAAAACCCTAGAAT+CGG - chr8_1:67907147-67907166 None:intergenic 40.0%
GAGTGAAGTGTGAATGAGAA+AGG - chr8_1:67907220-67907239 None:intergenic 40.0%
CTTTCATTCTTCTCAACAGC+AGG + chr8_1:67907256-67907275 Msa1209460:intron 40.0%
GATTTCGGAGAACGATTTAC+CGG + chr8_1:67907284-67907303 Msa1209460:CDS 40.0%
AGTAAAACCTGAACGTGTTC+CGG - chr8_1:67907306-67907325 None:intergenic 40.0%
!! TTCTACTTCAGCTGTCGTTT+TGG - chr8_1:67907583-67907602 None:intergenic 40.0%
GCGAAGAGACAAAATCATTC+CGG - chr8_1:67907625-67907644 None:intergenic 40.0%
TTGCAGTCTTCAAGACTGTA+AGG + chr8_1:67907746-67907765 Msa1209460:intron 40.0%
CAGCAAAAAACAGAGGAAAC+AGG - chr8_1:67908403-67908422 None:intergenic 40.0%
GGGAAAACAGCAAAAAACAG+AGG - chr8_1:67908410-67908429 None:intergenic 40.0%
ACACGGTTCGTAAATAGGAT+CGG - chr8_1:67908557-67908576 None:intergenic 40.0%
ACGTAACACGGTTCGTAAAT+AGG - chr8_1:67908562-67908581 None:intergenic 40.0%
AAAACACGAGGAACGTAACA+CGG - chr8_1:67908574-67908593 None:intergenic 40.0%
GTAAACATATCCTCTACGGT+TGG + chr8_1:67908732-67908751 Msa1209460:intron 40.0%
CTGATGATTTCAGTGCTTGA+AGG - chr8_1:67909165-67909184 None:intergenic 40.0%
ATCATCAGTAGAGTCCTTAG+CGG + chr8_1:67909177-67909196 Msa1209460:CDS 40.0%
! ATAGTAAATCCTTTTCCCCC+AGG + chr8_1:67909452-67909471 Msa1209460:intron 40.0%
CTCAAGTAGACAACGTGTTT+GGG - chr8_1:67909600-67909619 None:intergenic 40.0%
ACTCAAGTAGACAACGTGTT+TGG - chr8_1:67909601-67909620 None:intergenic 40.0%
!!! AACGCTTATTTTGGACTGGA+GGG - chr8_1:67909651-67909670 None:intergenic 40.0%
!!! AAGCAACGCTTATTTTGGAC+TGG - chr8_1:67909655-67909674 None:intergenic 40.0%
TAGAACAACTCCTAGAGTAC+TGG - chr8_1:67910314-67910333 None:intergenic 40.0%
GAGAGAGAGAGAGAGAAAAA+AGG - chr8_1:67910667-67910686 None:intergenic 40.0%
ATGCTGAGACCAGAATGAAT+TGG - chr8_1:67910778-67910797 None:intergenic 40.0%
ACAATTTCAGTCTGCTGTAC+GGG + chr8_1:67911005-67911024 Msa1209460:intron 40.0%
AAATAAGCGTACCAGAGATG+TGG + chr8_1:67911390-67911409 Msa1209460:intron 40.0%
AGACCTCTAGCTATGTATTG+AGG + chr8_1:67911505-67911524 Msa1209460:intron 40.0%
TCTCCTCAATACATAGCTAG+AGG - chr8_1:67911511-67911530 None:intergenic 40.0%
TGTATTGAGGAGAGTAGATC+CGG + chr8_1:67911518-67911537 Msa1209460:intron 40.0%
TTATGCCATCGTTTGATCCA+TGG + chr8_1:67911649-67911668 Msa1209460:intron 40.0%
AAAAGTGGGATAGCGTTAGT+GGG - chr8_1:67911906-67911925 None:intergenic 40.0%
!! ACTAACGCTATCCCACTTTT+GGG + chr8_1:67911906-67911925 Msa1209460:intron 40.0%
! AAAGCTTGGTAGTCAAATCC+CGG - chr8_1:67911944-67911963 None:intergenic 40.0%
CCCATAAGGGAATAAAAGCT+TGG - chr8_1:67911958-67911977 None:intergenic 40.0%
ATAATTTCGGGAGCCCATAA+GGG - chr8_1:67911971-67911990 None:intergenic 40.0%
AATAATTTCGGGAGCCCATA+AGG - chr8_1:67911972-67911991 None:intergenic 40.0%
GTAAACTCTTCATGGATCAC+TGG - chr8_1:67912047-67912066 None:intergenic 40.0%
TGATCCATGAAGAGTTTACG+CGG + chr8_1:67912048-67912067 Msa1209460:CDS 40.0%
TTAACCGCGTAAACTCTTCA+TGG - chr8_1:67912055-67912074 None:intergenic 40.0%
TGAAGAGTTTACGCGGTTAA+AGG + chr8_1:67912055-67912074 Msa1209460:CDS 40.0%
CGTCTATGGTCCCTTTAATT+TGG + chr8_1:67912272-67912291 Msa1209460:intron 40.0%
ATTAGGGGCTCCCATTAATA+AGG + chr8_1:67912302-67912321 Msa1209460:intron 40.0%
TTAGGGGCTCCCATTAATAA+GGG + chr8_1:67912303-67912322 Msa1209460:intron 40.0%
! ACGCACCTAGTAATTTGCAT+AGG + chr8_1:67912349-67912368 Msa1209460:intron 40.0%
TATCTCGTGTATACGGTGTA+TGG + chr8_1:67912717-67912736 Msa1209460:intron 40.0%
TTTGTATGAGTTGTCCGACA+CGG + chr8_1:67912770-67912789 Msa1209460:intron 40.0%
!!! TCTGAGTTGTGTTTGGCTTT+TGG + chr8_1:67913209-67913228 Msa1209460:intron 40.0%
!! GCTATGAAGGCGTCAATATT+AGG - chr8_1:67913240-67913259 None:intergenic 40.0%
! ACAGTAAATGTGGGCTATGA+AGG - chr8_1:67913253-67913272 None:intergenic 40.0%
GGAAAAGGACACAAGACTAA+AGG + chr8_1:67913469-67913488 Msa1209460:CDS 40.0%
TTACTTCCCAAAGCAAGATG+GGG + chr8_1:67913522-67913541 Msa1209460:CDS 40.0%
GATATATAGAATGTGGGGAG+GGG - chr8_1:67913709-67913728 None:intergenic 40.0%
CAGATATATAGAATGTGGGG+AGG - chr8_1:67913711-67913730 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr8_1:67914202-67914221 Msa1209460:intron 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + chr8_1:67914245-67914264 Msa1209460:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + chr8_1:67914246-67914265 Msa1209460:intron 40.0%
! CTTACCCTGTTTTACACAAG+AGG - chr8_1:67914253-67914272 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + chr8_1:67914251-67914270 Msa1209460:intron 40.0%
GATGCGTACAATACACCAAA+TGG + chr8_1:67914273-67914292 Msa1209460:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr8_1:67914277-67914296 Msa1209460:intron 40.0%
ATGTGTGGGTACCTCTAATA+GGG + chr8_1:67914418-67914437 Msa1209460:intron 40.0%
GAGTTGCAGAAACATATGGA+TGG + chr8_1:67914832-67914851 Msa1209460:intron 40.0%
CAGAGTGATATAAGGTGACT+TGG + chr8_1:67915125-67915144 Msa1209460:intron 40.0%
! AGTGATATAAGGTGACTTGG+TGG + chr8_1:67915128-67915147 Msa1209460:intron 40.0%
!! TATAAGGTGACTTGGTGGTT+TGG + chr8_1:67915133-67915152 Msa1209460:intron 40.0%
!! ATAAGGTGACTTGGTGGTTT+GGG + chr8_1:67915134-67915153 Msa1209460:intron 40.0%
CTAAGACACACATACAACCT+TGG - chr8_1:67915496-67915515 None:intergenic 40.0%
! TAGTCATTGGGTTTTCTTGC+AGG + chr8_1:67915513-67915532 Msa1209460:intron 40.0%
GCAAGGTAAATTAGACGAGA+AGG + chr8_1:67915546-67915565 Msa1209460:CDS 40.0%
AAAAAAGCTCCAGAGAGAAC+GGG + chr8_1:67915606-67915625 Msa1209460:CDS 40.0%
TGGTACTCATGATTCAGTCA+CGG - chr8_1:67915882-67915901 None:intergenic 40.0%
TGGGAGAGATGAAAATGAGG+GGG - chr8_1:67906959-67906978 None:intergenic 45.0%
GCTTGGGAGAGATGAAAATG+AGG - chr8_1:67906962-67906981 None:intergenic 45.0%
ATGAAAATTGGGCTTCGGCT+TGG - chr8_1:67906991-67907010 None:intergenic 45.0%
AAGTAGCTGTTGCTGGTACT+TGG - chr8_1:67907110-67907129 None:intergenic 45.0%
TCAGCTTCTCTCCGATTCTA+GGG + chr8_1:67907133-67907152 Msa1209460:five_prime_UTR 45.0%
AATTACGTCGTCGAGAGTTG+GGG - chr8_1:67907182-67907201 None:intergenic 45.0%
GAATTACGTCGTCGAGAGTT+GGG - chr8_1:67907183-67907202 None:intergenic 45.0%
AGAATTACGTCGTCGAGAGT+TGG - chr8_1:67907184-67907203 None:intergenic 45.0%
! TGATTTTGTCTCTTCGCGAG+AGG + chr8_1:67907628-67907647 Msa1209460:CDS 45.0%
GGACTGAATTAGAGAAAGGG+TGG + chr8_1:67908003-67908022 Msa1209460:intron 45.0%
TGCTCCTAGACATTGTAGTC+AGG + chr8_1:67908292-67908311 Msa1209460:intron 45.0%
CGATCCTGACTACAATGTCT+AGG - chr8_1:67908299-67908318 None:intergenic 45.0%
GTAAAGTCTAAGCACGGTCA+AGG - chr8_1:67908364-67908383 None:intergenic 45.0%
ACCGTGCTTAGACTTTACTC+CGG + chr8_1:67908366-67908385 Msa1209460:intron 45.0%
ACCGGAGTAAAGTCTAAGCA+CGG - chr8_1:67908370-67908389 None:intergenic 45.0%
GGTTCGTAAATAGGATCGGT+AGG - chr8_1:67908553-67908572 None:intergenic 45.0%
GTGAACGAACGTAAAACACG+AGG - chr8_1:67908586-67908605 None:intergenic 45.0%
! CGTGTTTTACGTTCGTTCAC+CGG + chr8_1:67908586-67908605 Msa1209460:intron 45.0%
ATCGAGATCCTACGTAGGAT+CGG - chr8_1:67908616-67908635 None:intergenic 45.0%
CTCTCTCTCTCAATGTAGTC+AGG - chr8_1:67908639-67908658 None:intergenic 45.0%
ACGTACAAACTAACCTGGTG+TGG - chr8_1:67909000-67909019 None:intergenic 45.0%
GCAAGAGATAGCAAAGCTGA+AGG + chr8_1:67909363-67909382 Msa1209460:CDS 45.0%
ATATTCTCTCCTGGGGGAAA+AGG - chr8_1:67909464-67909483 None:intergenic 45.0%
!!! CAACGCTTATTTTGGACTGG+AGG - chr8_1:67909652-67909671 None:intergenic 45.0%
TAAGCTCCGTAAAACATGGC+TGG - chr8_1:67909995-67910014 None:intergenic 45.0%
!! TTGGCTTGAGTTGAGCTTTG+AGG - chr8_1:67911032-67911051 None:intergenic 45.0%
ACTCAAGCCAACATCAATGC+AGG + chr8_1:67911041-67911060 Msa1209460:CDS 45.0%
GGATGATTTCATGCTAGGAC+CGG + chr8_1:67911290-67911309 Msa1209460:intron 45.0%
GAGGGTAGTGAAATCACTAG+AGG + chr8_1:67911543-67911562 Msa1209460:intron 45.0%
ATGTCTTATCCCACCAAGTG+GGG - chr8_1:67911681-67911700 None:intergenic 45.0%
CATGTCTTATCCCACCAAGT+GGG - chr8_1:67911682-67911701 None:intergenic 45.0%
CAAAAGTGGGATAGCGTTAG+TGG - chr8_1:67911907-67911926 None:intergenic 45.0%
! CACTAACGCTATCCCACTTT+TGG + chr8_1:67911905-67911924 Msa1209460:intron 45.0%
!! CTAACGCTATCCCACTTTTG+GGG + chr8_1:67911907-67911926 Msa1209460:intron 45.0%
CATAGACGACCCTCATCAAA+TGG - chr8_1:67912260-67912279 None:intergenic 45.0%
CATTTGATGAGGGTCGTCTA+TGG + chr8_1:67912258-67912277 Msa1209460:intron 45.0%
AACACTCATATGAGCCGTGT+CGG - chr8_1:67912787-67912806 None:intergenic 45.0%
!! GTTATATAGGTGTCGGACAC+CGG + chr8_1:67912804-67912823 Msa1209460:intron 45.0%
TTACTTCGACACTCCTAGAC+CGG - chr8_1:67912826-67912845 None:intergenic 45.0%
! TACGAGTGTCATAGGAGTGT+CGG + chr8_1:67912898-67912917 Msa1209460:intron 45.0%
TATGAAGCACGGAAACCTCT+AGG - chr8_1:67912943-67912962 None:intergenic 45.0%
!! ATAACTTCTAGGTGTTGGGG+TGG + chr8_1:67913103-67913122 Msa1209460:intron 45.0%
CAACTTCCCCATCTTGCTTT+GGG - chr8_1:67913531-67913550 None:intergenic 45.0%
CAAGATGGGGAAGTTGCTAA+TGG + chr8_1:67913535-67913554 Msa1209460:CDS 45.0%
ATTGGGCTTCAAGCTTCTGA+GGG + chr8_1:67913593-67913612 Msa1209460:CDS 45.0%
TGAGAATAGAGGGGTAACCT+TGG + chr8_1:67914166-67914185 Msa1209460:intron 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr8_1:67914208-67914227 Msa1209460:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr8_1:67914209-67914228 Msa1209460:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr8_1:67914242-67914261 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr8_1:67914276-67914295 Msa1209460:intron 45.0%
CATGTGTGGGTACCTCTAAT+AGG + chr8_1:67914417-67914436 Msa1209460:intron 45.0%
!! GGATGGATTGACCAATGATG+TGG + chr8_1:67914849-67914868 Msa1209460:CDS 45.0%
!! TAAGGTGACTTGGTGGTTTG+GGG + chr8_1:67915135-67915154 Msa1209460:intron 45.0%
! TTGCAGGTTTTCATGCTGCA+AGG + chr8_1:67915529-67915548 Msa1209460:intron 45.0%
AAATGCAGCACGTAATGCCA+GGG + chr8_1:67915634-67915653 Msa1209460:exon 45.0%
AGTATCATCTCGTCAATCCC+TGG - chr8_1:67915654-67915673 None:intergenic 45.0%
TACTCATGATTCAGTCACGG+TGG - chr8_1:67915879-67915898 None:intergenic 45.0%
!!! TATTTTATTTACATAATTTA+GGG - chr8_1:67907897-67907916 None:intergenic 5.0%
!!! TTATTTTATTTACATAATTT+AGG - chr8_1:67907898-67907917 None:intergenic 5.0%
AGTAGGGTGGTCGAGAAGTA+TGG + chr8_1:67906914-67906933 Msa1209460:five_prime_UTR 50.0%
GTTGCTGGTACTTGGAGTAG+AGG - chr8_1:67907102-67907121 None:intergenic 50.0%
CTGAGTGAAGTAGCTGTTGC+TGG - chr8_1:67907117-67907136 None:intergenic 50.0%
CTCAGCTTCTCTCCGATTCT+AGG + chr8_1:67907132-67907151 Msa1209460:five_prime_UTR 50.0%
CGATTTACCGGAACACGTTC+AGG + chr8_1:67907296-67907315 Msa1209460:CDS 50.0%
GCTGAAGTAGAAGCTGCTTC+TGG + chr8_1:67907591-67907610 Msa1209460:CDS 50.0%
!! GCTGCTTCTGGTGTTACAAC+CGG + chr8_1:67907603-67907622 Msa1209460:CDS 50.0%
! GGAAACGCTTGATTCGTGCT+TGG + chr8_1:67907767-67907786 Msa1209460:CDS 50.0%
! AAGCACGGTCAAGGTGCTTT+AGG - chr8_1:67908355-67908374 None:intergenic 50.0%
GAAACAGGGCAAAGACGAAC+CGG - chr8_1:67908388-67908407 None:intergenic 50.0%
AGATCCTACGTAGGATCGGT+CGG - chr8_1:67908612-67908631 None:intergenic 50.0%
TCAGGATCGAGATCCTACGT+AGG - chr8_1:67908621-67908640 None:intergenic 50.0%
GTGGTCTCAGCAGGTATGAA+TGG - chr8_1:67908981-67909000 None:intergenic 50.0%
! AGTAGAGTCCTTAGCGGATC+AGG + chr8_1:67909183-67909202 Msa1209460:CDS 50.0%
ATTGAATGCACACTACGCCG+AGG - chr8_1:67909933-67909952 None:intergenic 50.0%
TGGGATGACCAGCGAAATGA+CGG - chr8_1:67910617-67910636 None:intergenic 50.0%
CTGTATGGAGTCCAAGAGTC+AGG + chr8_1:67910742-67910761 Msa1209460:intron 50.0%
AGATGGTAGGAACTCGGCTT+AGG + chr8_1:67911461-67911480 Msa1209460:intron 50.0%
GAACTCGGCTTAGGTGGTTT+GGG + chr8_1:67911470-67911489 Msa1209460:intron 50.0%
ATTGAGGAGAGTAGATCCGG+TGG + chr8_1:67911521-67911540 Msa1209460:intron 50.0%
GTGATTTCACTACCCTCCAC+CGG - chr8_1:67911540-67911559 None:intergenic 50.0%
TGGCTCCATGGATCAAACGA+TGG - chr8_1:67911657-67911676 None:intergenic 50.0%
CCATGTCTTATCCCACCAAG+TGG - chr8_1:67911683-67911702 None:intergenic 50.0%
! CCACTTGGTGGGATAAGACA+TGG + chr8_1:67911680-67911699 Msa1209460:intron 50.0%
ACGTGTCGTACGAGTGTCAT+AGG + chr8_1:67912890-67912909 Msa1209460:intron 50.0%
TGCGACACTCTTAGTCCTAG+AGG + chr8_1:67912925-67912944 Msa1209460:intron 50.0%
! CGGAGGGAGTACATTAGAGA+AGG + chr8_1:67912974-67912993 Msa1209460:intron 50.0%
GCAACTTCCCCATCTTGCTT+TGG - chr8_1:67913532-67913551 None:intergenic 50.0%
GATTGGGCTTCAAGCTTCTG+AGG + chr8_1:67913592-67913611 Msa1209460:CDS 50.0%
! GCTTCAAGCTTCTGAGGGAA+AGG + chr8_1:67913598-67913617 Msa1209460:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr8_1:67914186-67914205 None:intergenic 50.0%
!! AAGGTGACTTGGTGGTTTGG+GGG + chr8_1:67915136-67915155 Msa1209460:intron 50.0%
ATGGGTTCAACTTACCCCTC+TGG + chr8_1:67915190-67915209 Msa1209460:intron 50.0%
ACAAAGCTTAGGGGCAGCAT+TGG - chr8_1:67915283-67915302 None:intergenic 50.0%
ATTTGCTCTCCCGTTCTCTC+TGG - chr8_1:67915618-67915637 None:intergenic 50.0%
CAAATGCAGCACGTAATGCC+AGG + chr8_1:67915633-67915652 Msa1209460:exon 50.0%
ATTCAGTCACGGTGGCGTAT+GGG - chr8_1:67915871-67915890 None:intergenic 50.0%
! AGGGTGGTCGAGAAGTATGG+TGG + chr8_1:67906917-67906936 Msa1209460:five_prime_UTR 55.0%
! GGGTGGTCGAGAAGTATGGT+GGG + chr8_1:67906918-67906937 Msa1209460:five_prime_UTR 55.0%
!! TTCGGCTTGGTCTTGGGCTT+GGG - chr8_1:67906978-67906997 None:intergenic 55.0%
!! TTGGGCTTCGGCTTGGTCTT+GGG - chr8_1:67906984-67907003 None:intergenic 55.0%
!! ATTGGGCTTCGGCTTGGTCT+TGG - chr8_1:67906985-67907004 None:intergenic 55.0%
TGGGGAAGACATGGTGAAGC+TGG - chr8_1:67907164-67907183 None:intergenic 55.0%
GTCGAGAGTTGGGGAAGACA+TGG - chr8_1:67907173-67907192 None:intergenic 55.0%
!! AGGATCGAGTGCTGACTCGT+AGG + chr8_1:67908312-67908331 Msa1209460:intron 55.0%
ATACCTGCTGAGACCACACC+AGG + chr8_1:67908984-67909003 Msa1209460:CDS 55.0%
TAACCTGGTGTGGTCTCAGC+AGG - chr8_1:67908990-67909009 None:intergenic 55.0%
TGGCTGAACCTGATCCGCTA+AGG - chr8_1:67909194-67909213 None:intergenic 55.0%
TAACGTGCCCGTCATTTCGC+TGG + chr8_1:67910606-67910625 Msa1209460:intron 55.0%
GGGATGACCAGCGAAATGAC+GGG - chr8_1:67910616-67910635 None:intergenic 55.0%
TAGGACCGGTGATGTTGCGT+GGG + chr8_1:67911304-67911323 Msa1209460:intron 55.0%
TGGTAGGAACTCGGCTTAGG+TGG + chr8_1:67911464-67911483 Msa1209460:intron 55.0%
GGAACTCGGCTTAGGTGGTT+TGG + chr8_1:67911469-67911488 Msa1209460:intron 55.0%
AGGAGAGTAGATCCGGTGGA+GGG + chr8_1:67911525-67911544 Msa1209460:intron 55.0%
CTTATCCCACCAAGTGGGGT+TGG - chr8_1:67911677-67911696 None:intergenic 55.0%
GGTAGTCAAATCCCGGACAG+CGG - chr8_1:67911937-67911956 None:intergenic 55.0%
GACACTCGTACGACACGTGT+CGG - chr8_1:67912888-67912907 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr8_1:67914221-67914240 Msa1209460:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr8_1:67914316-67914335 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - chr8_1:67914317-67914336 None:intergenic 55.0%
GATTCAGTCACGGTGGCGTA+TGG - chr8_1:67915872-67915891 None:intergenic 55.0%
!! CTTCGGCTTGGTCTTGGGCT+TGG - chr8_1:67906979-67906998 None:intergenic 60.0%
CTAGGACCGGTGATGTTGCG+TGG + chr8_1:67911303-67911322 Msa1209460:intron 60.0%
ACCGGTGATGTTGCGTGGGA+CGG + chr8_1:67911308-67911327 Msa1209460:intron 60.0%
GAGGAGAGTAGATCCGGTGG+AGG + chr8_1:67911524-67911543 Msa1209460:intron 60.0%
TCCATGGAGCCAACCCCACT+TGG + chr8_1:67911665-67911684 Msa1209460:intron 60.0%
!! ACCAAGTGGGGTTGGCTCCA+TGG - chr8_1:67911669-67911688 None:intergenic 60.0%
ATGGAGCCAACCCCACTTGG+TGG + chr8_1:67911668-67911687 Msa1209460:intron 60.0%
TGGAGCCAACCCCACTTGGT+GGG + chr8_1:67911669-67911688 Msa1209460:intron 60.0%
!!! CGCTATCCCACTTTTGGGGC+CGG + chr8_1:67911911-67911930 Msa1209460:intron 60.0%
!! TAGGTGTCGGACACCGGTCT+AGG + chr8_1:67912810-67912829 Msa1209460:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr8_1:67914175-67914194 Msa1209460:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr8_1:67914289-67914308 Msa1209460:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr8_1:67914304-67914323 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr8_1:67914305-67914324 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr8_1:67914304-67914323 Msa1209460:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr8_1:67914305-67914324 Msa1209460:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + chr8_1:67914321-67914340 Msa1209460:intron 60.0%
!! GTGACTTGGTGGTTTGGGGG+AGG + chr8_1:67915139-67915158 Msa1209460:intron 60.0%
CCTACGTAGGATCGGTCGGC+CGG - chr8_1:67908608-67908627 None:intergenic 65.0%
CCCGTCCCACGCAACATCAC+CGG - chr8_1:67911312-67911331 None:intergenic 65.0%
CCGGTGATGTTGCGTGGGAC+GGG + chr8_1:67911309-67911328 Msa1209460:intron 65.0%
CGGTGATGTTGCGTGGGACG+GGG + chr8_1:67911310-67911329 Msa1209460:intron 65.0%
GATGTTGCGTGGGACGGGGA+CGG + chr8_1:67911314-67911333 Msa1209460:intron 65.0%
! TGGGACGGGGACGGAGTGTT+GGG + chr8_1:67911323-67911342 Msa1209460:intron 65.0%
GTCAAATCCCGGACAGCGGC+CGG - chr8_1:67911933-67911952 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr8_1:67914291-67914310 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr8_1:67914306-67914325 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr8_1:67914310-67914329 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr8_1:67914311-67914330 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + chr8_1:67914322-67914341 Msa1209460:intron 65.0%
CAGTCACGGTGGCGTATGGG+TGG - chr8_1:67915868-67915887 None:intergenic 65.0%
CCGGCCGACCGATCCTACGT+AGG + chr8_1:67908605-67908624 Msa1209460:intron 70.0%
GTGGGACGGGGACGGAGTGT+TGG + chr8_1:67911322-67911341 Msa1209460:intron 70.0%
!! GGGACGGGGACGGAGTGTTG+GGG + chr8_1:67911324-67911343 Msa1209460:intron 70.0%
!! GGACGGGGACGGAGTGTTGG+GGG + chr8_1:67911325-67911344 Msa1209460:intron 70.0%
!! GACGGGGACGGAGTGTTGGG+GGG + chr8_1:67911326-67911345 Msa1209460:intron 70.0%
!! ACGGGGACGGAGTGTTGGGG+GGG + chr8_1:67911327-67911346 Msa1209460:intron 70.0%
CAGCGGCCGGCCCCAAAAGT+GGG - chr8_1:67911920-67911939 None:intergenic 70.0%
ACAGCGGCCGGCCCCAAAAG+TGG - chr8_1:67911921-67911940 None:intergenic 70.0%
!!! TTTTGGGGCCGGCCGCTGTC+CGG + chr8_1:67911922-67911941 Msa1209460:intron 70.0%
!! CGGGGACGGAGTGTTGGGGG+GGG + chr8_1:67911328-67911347 Msa1209460:intron 75.0%
!! GGGGACGGAGTGTTGGGGGG+GGG + chr8_1:67911329-67911348 Msa1209460:intron 75.0%
!! GGGACGGAGTGTTGGGGGGG+GGG + chr8_1:67911330-67911349 Msa1209460:intron 75.0%
!! GGACGGAGTGTTGGGGGGGG+GGG + chr8_1:67911331-67911350 Msa1209460:intron 75.0%
!! GACGGAGTGTTGGGGGGGGG+GGG + chr8_1:67911332-67911351 Msa1209460:intron 75.0%
!! ACGGAGTGTTGGGGGGGGGG+GGG + chr8_1:67911333-67911352 Msa1209460:intron 75.0%
! TTTGGGGCCGGCCGCTGTCC+GGG + chr8_1:67911923-67911942 Msa1209460:intron 75.0%
!!! CGGAGTGTTGGGGGGGGGGG+GGG + chr8_1:67911334-67911353 Msa1209460:intron 80.0%
!!! GGAGTGTTGGGGGGGGGGGG+GGG + chr8_1:67911335-67911354 Msa1209460:intron 80.0%
!!! GAGTGTTGGGGGGGGGGGGG+GGG + chr8_1:67911336-67911355 Msa1209460:intron 80.0%
!! AGTGTTGGGGGGGGGGGGGG+GGG + chr8_1:67911337-67911356 Msa1209460:intron 80.0%
! GTGTTGGGGGGGGGGGGGGG+GGG + chr8_1:67911338-67911357 Msa1209460:intron 85.0%
! TGTTGGGGGGGGGGGGGGGG+GGG + chr8_1:67911339-67911358 Msa1209460:intron 85.0%
! GTTGGGGGGGGGGGGGGGGG+GGG + chr8_1:67911340-67911359 Msa1209460:intron 90.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr8_1:67911341-67911360 Msa1209460:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr8_1:67911342-67911361 Msa1209460:intron 95.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 67906901 67915955 67906901 ID=Msa1209460;Name=Msa1209460
chr8_1 mRNA 67906901 67915955 67906901 ID=Msa1209460-mRNA-1;Parent=Msa1209460;Name=Msa1209460-mRNA-1;_AED=0.13;_eAED=0.13;_QI=271|1|1|1|1|1|14|307|327
chr8_1 exon 67906901 67907195 67906901 ID=Msa1209460-mRNA-1:exon:22560;Parent=Msa1209460-mRNA-1
chr8_1 exon 67907275 67907317 67907275 ID=Msa1209460-mRNA-1:exon:22561;Parent=Msa1209460-mRNA-1
chr8_1 exon 67907408 67907481 67907408 ID=Msa1209460-mRNA-1:exon:22562;Parent=Msa1209460-mRNA-1
chr8_1 exon 67907579 67907649 67907579 ID=Msa1209460-mRNA-1:exon:22563;Parent=Msa1209460-mRNA-1
chr8_1 exon 67907752 67907788 67907752 ID=Msa1209460-mRNA-1:exon:22564;Parent=Msa1209460-mRNA-1
chr8_1 exon 67908918 67909005 67908918 ID=Msa1209460-mRNA-1:exon:22565;Parent=Msa1209460-mRNA-1
chr8_1 exon 67909140 67909204 67909140 ID=Msa1209460-mRNA-1:exon:22566;Parent=Msa1209460-mRNA-1
chr8_1 exon 67909307 67909384 67909307 ID=Msa1209460-mRNA-1:exon:22567;Parent=Msa1209460-mRNA-1
chr8_1 exon 67911015 67911062 67911015 ID=Msa1209460-mRNA-1:exon:22568;Parent=Msa1209460-mRNA-1
chr8_1 exon 67912023 67912076 67912023 ID=Msa1209460-mRNA-1:exon:22569;Parent=Msa1209460-mRNA-1
chr8_1 exon 67913458 67913619 67913458 ID=Msa1209460-mRNA-1:exon:22570;Parent=Msa1209460-mRNA-1
chr8_1 exon 67913926 67913995 67913926 ID=Msa1209460-mRNA-1:exon:22571;Parent=Msa1209460-mRNA-1
chr8_1 exon 67914833 67914888 67914833 ID=Msa1209460-mRNA-1:exon:22572;Parent=Msa1209460-mRNA-1
chr8_1 exon 67915535 67915955 67915535 ID=Msa1209460-mRNA-1:exon:22573;Parent=Msa1209460-mRNA-1
chr8_1 five_prime_UTR 67906901 67907171 67906901 ID=Msa1209460-mRNA-1:five_prime_utr;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67907172 67907195 67907172 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67907275 67907317 67907275 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67907408 67907481 67907408 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67907579 67907649 67907579 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67907752 67907788 67907752 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67908918 67909005 67908918 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67909140 67909204 67909140 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67909307 67909384 67909307 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67911015 67911062 67911015 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67912023 67912076 67912023 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67913458 67913619 67913458 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67913926 67913995 67913926 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67914833 67914888 67914833 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 CDS 67915535 67915648 67915535 ID=Msa1209460-mRNA-1:cds;Parent=Msa1209460-mRNA-1
chr8_1 three_prime_UTR 67915649 67915955 67915649 ID=Msa1209460-mRNA-1:three_prime_utr;Parent=Msa1209460-mRNA-1
Gene Sequence

>Msa1209460

ATGTCTTCCCCAACTCTCGACGACCAGGAATTTGATTTCGGAGAACGATTTACCGGAACACGTTCAGATACTGTAAGTCATAAGAGGTCTTCTGCTGAATTTGATGATGGAAATTTTGATAATGATCCTTACGGAAAGAAGGCCAAAACGACAGCTGAAGTAGAAGCTGCTTCTGGTGTTACAACCGGAATGATTTTGTCTCTTCGCGAGAGTCTTCAAGACTGTAAGGAAACGCTTGATTCGTGCTTGAATGAACTTGAGGATGCACAATACGAGATTCAGAATTGGCGCTCTGCATTTCAAAATGCACCATTCATACCTGCTGAGACCACACCAGTACCCAAATTGGTGATTAATTACCTTCAAGCACTGAAATCATCAGTAGAGTCCTTAGCGGATCAGCTTGAAAAGGCAAAGAAAAAGGAAGTTGCATTCATTGTGACATTTGCTAAACGTGAGCAAGAGATAGCAAAGCTGAAGTCTGCTGTACGGGACCTCAAAGCTCAACTCAAGCCAACATCAATGCAGGCAAGAAGGTTCTTATTAGATCCAGTGATCCATGAAGAGTTTACGCGGTTAAAGAATTTAGTTGCGGAAAAGGACACAAGACTAAAGGAGTTGCAAGATCAAATGTCTGCTGTAAAATTTACTTCCCAAAGCAAGATGGGGAAGTTGCTAATGGCTAAATGTAAAACTCTGCAAGAGGAAAATGAAGAGATTGGGCTTCAAGCTTCTGAGGGAAAGATGCATGAATTAGCAATGAAACTTTCATTGCAGAAAGATCAGAATTCAGAGCTCAGAAATCAATTTGAAGAGTTGCAGAAACATATGGATGGATTGACCAATGATGTGGAAAGATCAAATGAAACGGTTTTCATGCTGCAAGGTAAATTAGACGAGAAGGATTTAGAGATTGAAAGACTGAAAGATGCGTTGCAACAAAAAAAGCTCCAGAGAGAACGGGAGAGCAAATGCAGCACGTAA

Protein sequence

>Msa1209460

MSSPTLDDQEFDFGERFTGTRSDTVSHKRSSAEFDDGNFDNDPYGKKAKTTAEVEAASGVTTGMILSLRESLQDCKETLDSCLNELEDAQYEIQNWRSAFQNAPFIPAETTPVPKLVINYLQALKSSVESLADQLEKAKKKEVAFIVTFAKREQEIAKLKSAVRDLKAQLKPTSMQARRFLLDPVIHEEFTRLKNLVAEKDTRLKELQDQMSAVKFTSQSKMGKLLMAKCKTLQEENEEIGLQASEGKMHELAMKLSLQKDQNSELRNQFEELQKHMDGLTNDVERSNETVFMLQGKLDEKDLEIERLKDALQQKKLQRERESKCST*