Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101250 | sp|Q9SX85|SEC3A_ARATH | 83.502 | 891 | 134 | 6 | 1 | 882 | 1 | 887 | 0.0 | 1535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101250 | G7I5A3 | 98.194 | 886 | 10 | 3 | 1 | 882 | 1 | 884 | 0.0 | 1787 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028620 | Msa0101250 | 0.805433 | 1.338239e-49 | -8.615850e-47 |
| Msa0051040 | Msa0101250 | 0.932950 | 3.935473e-95 | -8.615850e-47 |
| Msa0101250 | Msa0189710 | 0.839099 | 1.939816e-57 | -8.615850e-47 |
| Msa0101250 | Msa0232020 | 0.836792 | 7.602728e-57 | -8.615850e-47 |
| Msa0101250 | Msa0232090 | 0.832593 | 8.652565e-56 | -8.615850e-47 |
| Msa0101250 | Msa0287870 | 0.849686 | 2.756818e-60 | -8.615850e-47 |
| Msa0101250 | Msa0310090 | 0.830988 | 2.152870e-55 | -8.615850e-47 |
| Msa0101250 | Msa0393430 | 0.815143 | 1.075013e-51 | -8.615850e-47 |
| Msa0101250 | Msa0403640 | 0.823989 | 1.028916e-53 | -8.615850e-47 |
| Msa0101250 | Msa0548120 | 0.807517 | 4.862783e-50 | -8.615850e-47 |
| Msa0101250 | Msa0623070 | 0.801536 | 8.596915e-49 | -8.615850e-47 |
| Msa0101250 | Msa0679020 | 0.800593 | 1.340123e-48 | -8.615850e-47 |
| Msa0101250 | Msa0697590 | 0.801304 | 9.589939e-49 | -8.615850e-47 |
| Msa0101250 | Msa0713510 | 0.819906 | 9.078397e-53 | -8.615850e-47 |
| Msa0101250 | Msa0733010 | 0.811388 | 7.179927e-51 | -8.615850e-47 |
| Msa0101250 | Msa0817460 | 0.800639 | 1.311568e-48 | -8.615850e-47 |
| Msa0101250 | Msa0881040 | 0.805776 | 1.133724e-49 | -8.615850e-47 |
| Msa0101250 | Msa0899970 | 0.845204 | 4.699892e-59 | -8.615850e-47 |
| Msa0101250 | Msa0965080 | 0.849516 | 3.075064e-60 | -8.615850e-47 |
| Msa0101250 | Msa0965290 | 0.843077 | 1.749260e-58 | -8.615850e-47 |
| Msa0101250 | Msa0999680 | 0.840896 | 6.595635e-58 | -8.615850e-47 |
| Msa0101250 | Msa1065430 | 0.804299 | 2.308814e-49 | -8.615850e-47 |
| Msa0101250 | Msa1114780 | 0.854855 | 9.319498e-62 | -8.615850e-47 |
| Msa0101250 | Msa1161810 | 0.811944 | 5.433137e-51 | -8.615850e-47 |
| Msa0101250 | Msa1183890 | 0.800294 | 1.541722e-48 | -8.615850e-47 |
| Msa0101250 | Msa1236440 | 0.821816 | 3.302109e-53 | -8.615850e-47 |
| Msa0101250 | Msa1238660 | 0.800028 | 1.746047e-48 | -8.615850e-47 |
| Msa0101250 | Msa1256060 | 0.803393 | 3.561220e-49 | -8.615850e-47 |
| Msa0101250 | Msa1277670 | 0.811880 | 5.611007e-51 | -8.615850e-47 |
| Msa0101250 | Msa1282440 | 0.801842 | 7.439618e-49 | -8.615850e-47 |
| Msa0101250 | Msa1319560 | 0.821913 | 3.135960e-53 | -8.615850e-47 |
| Msa0101250 | Msa1342380 | 0.800937 | 1.140264e-48 | -8.615850e-47 |
| Msa0101250 | Msa1352280 | -0.809723 | 1.643790e-50 | -8.615850e-47 |
| Msa0101250 | Msa1380220 | 0.804432 | 2.166021e-49 | -8.615850e-47 |
| Msa0101250 | Msa1442920 | 0.815809 | 7.640976e-52 | -8.615850e-47 |
| Msa0101250 | Msa1452710 | 0.808955 | 2.400872e-50 | -8.615850e-47 |
| Msa0101250 | Msa1458680 | 0.849696 | 2.739017e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101250 | MtrunA17_Chr1g0154401 | 98.194 | 886 | 10 | 3 | 1 | 882 | 1 | 884 | 0.0 | 1787 |
| Msa0101250 | MtrunA17_Chr3g0141311 | 78.403 | 889 | 174 | 7 | 1 | 882 | 1 | 878 | 0.0 | 1428 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0101250 | AT1G47550.1 | 83.502 | 891 | 134 | 6 | 1 | 882 | 1 | 887 | 0.0 | 1535 |
| Msa0101250 | AT1G47550.2 | 83.408 | 892 | 134 | 7 | 1 | 882 | 1 | 888 | 0.0 | 1530 |
| Msa0101250 | AT1G47560.1 | 81.145 | 891 | 155 | 6 | 1 | 882 | 1 | 887 | 0.0 | 1484 |
Find 172 sgRNAs with CRISPR-Local
Find 889 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCATCTCTAAAGATGTTT+TGG | 0.191387 | 1_3:-7847361 | Msa0101250:CDS |
| TAAAGGCTCGCTTTCTAAAA+TGG | 0.192233 | 1_3:+7844657 | None:intergenic |
| TGATGATGATTTGGGAATTA+TGG | 0.206606 | 1_3:-7840826 | Msa0101250:CDS |
| AGAGGACATGGAGGCTCTTT+TGG | 0.215755 | 1_3:-7846347 | Msa0101250:CDS |
| AGTAATACCTCATTTATTAA+AGG | 0.218040 | 1_3:+7844640 | None:intergenic |
| TCCTAAGATGCCGTGACTTT+TGG | 0.251356 | 1_3:+7849724 | None:intergenic |
| CGCATAAGTGAGGTCAATAT+TGG | 0.260424 | 1_3:+7842058 | None:intergenic |
| ATAACAGAACGATATCTTTC+TGG | 0.263028 | 1_3:-7838901 | Msa0101250:CDS |
| GAGAAATTACTTTGCTAGTT+TGG | 0.269162 | 1_3:-7841761 | Msa0101250:CDS |
| GTTCATTTCTTTCAATTTGA+TGG | 0.269204 | 1_3:+7838685 | None:intergenic |
| TGAATCACTTCAGGATTTAC+TGG | 0.296040 | 1_3:-7840093 | Msa0101250:CDS |
| GAGCCACACTTTGGCTTCTA+AGG | 0.298652 | 1_3:+7847549 | None:intergenic |
| AGTATATGATCATGCTAATA+TGG | 0.299003 | 1_3:+7836710 | None:intergenic |
| AAGAACTGTTACCTTCCTTA+TGG | 0.301508 | 1_3:-7835961 | Msa0101250:CDS |
| TGTTGTGGAGTTGGCTCTTT+GGG | 0.302230 | 1_3:-7847310 | Msa0101250:CDS |
| CCATGTCCTCTTCCTCTGCC+TGG | 0.306661 | 1_3:+7846359 | None:intergenic |
| TCAGGGACAGTCTAGGGATT+TGG | 0.331946 | 1_3:-7837489 | Msa0101250:CDS |
| TTTCTTATACATCGCATTGA+TGG | 0.332287 | 1_3:+7836006 | None:intergenic |
| AATCCAACTGTTTGGCTTGA+AGG | 0.341279 | 1_3:-7841121 | Msa0101250:CDS |
| ACAGATGTGAATGTCTCATT+AGG | 0.344916 | 1_3:+7835077 | None:intergenic |
| TAATACAAACTAACCTCTTC+AGG | 0.347914 | 1_3:+7836516 | None:intergenic |
| TTCAGATACCTTTCCAGCTT+GGG | 0.348314 | 1_3:-7836172 | Msa0101250:intron |
| CATTTGCTGCTTCCAGAGCC+TGG | 0.354262 | 1_3:+7844686 | None:intergenic |
| TCCAAAAGTCACGGCATCTT+AGG | 0.364442 | 1_3:-7849725 | Msa0101250:CDS |
| ACATTACTCTGAGTTGAAAC+AGG | 0.370628 | 1_3:+7846457 | None:intergenic |
| CCTCAATCCTTCGAGCAAAC+TGG | 0.370769 | 1_3:+7836559 | None:intergenic |
| ATGTTGTGGAGTTGGCTCTT+TGG | 0.371883 | 1_3:-7847311 | Msa0101250:CDS |
| CATTTGCAAGCTGTTATTAC+GGG | 0.376820 | 1_3:+7842343 | None:intergenic |
| GCATTTGCAAGCTGTTATTA+CGG | 0.384833 | 1_3:+7842342 | None:intergenic |
| TCGTATGGAGCAGTACATTC+AGG | 0.402425 | 1_3:-7837507 | Msa0101250:CDS |
| AACAAATGTTGTAGACGATA+TGG | 0.408324 | 1_3:-7843515 | Msa0101250:CDS |
| CATCTAGAAATCCAACTGTT+TGG | 0.408587 | 1_3:-7841129 | Msa0101250:CDS |
| AGAACTGTTACCTTCCTTAT+GGG | 0.409508 | 1_3:-7835960 | Msa0101250:CDS |
| TAGCGTAATGTTTGCAACCT+TGG | 0.411602 | 1_3:-7837007 | Msa0101250:CDS |
| AACAACAAACTCCGGCGAAA+TGG | 0.412068 | 1_3:-7849840 | Msa0101250:exon |
| GAAGAGAGAGCTCCAGGCTC+TGG | 0.412581 | 1_3:-7844698 | Msa0101250:CDS |
| TGTGTGTCGCAGGTGTTGTA+TGG | 0.421271 | 1_3:-7843550 | Msa0101250:intron |
| CCTCCAGGAGGTGTTGTTAA+CGG | 0.424284 | 1_3:-7840870 | Msa0101250:CDS |
| TACCTTGCATTTGTCCCATA+AGG | 0.425552 | 1_3:+7835946 | None:intergenic |
| ACGTCTTCTTCAGCATTTGA+AGG | 0.429611 | 1_3:-7841552 | Msa0101250:intron |
| GGCGAAATGGCGAAATCTAC+TGG | 0.433895 | 1_3:-7849827 | Msa0101250:exon |
| CTCTAAACTTGCTTCTTCGC+CGG | 0.440685 | 1_3:-7841387 | Msa0101250:CDS |
| AGCTTTAAATGAATCACTTC+AGG | 0.446554 | 1_3:-7840102 | Msa0101250:CDS |
| TGAACGGAATGTTCGCCAAA+TGG | 0.447886 | 1_3:-7838667 | Msa0101250:CDS |
| AGCTTGTTCATAGGCTTCAC+TGG | 0.449048 | 1_3:+7836741 | None:intergenic |
| TTTCAGATACCTTTCCAGCT+TGG | 0.449546 | 1_3:-7836173 | Msa0101250:intron |
| GGAGTTGGCTCTTTGGGCTA+AGG | 0.449911 | 1_3:-7847304 | Msa0101250:intron |
| AAGACTGAAGAGAGAGCTCC+AGG | 0.451275 | 1_3:-7844704 | Msa0101250:CDS |
| CATGTCCTCTTCCTCTGCCT+GGG | 0.452338 | 1_3:+7846360 | None:intergenic |
| GCGCGTGCAAGCTTGTTCAT+AGG | 0.452902 | 1_3:+7836732 | None:intergenic |
| ACTATGCTGCCTTTCAGAAT+AGG | 0.453773 | 1_3:-7836933 | Msa0101250:CDS |
| TCTAAACTTGCTTCTTCGCC+GGG | 0.459252 | 1_3:-7841386 | Msa0101250:CDS |
| TAGTTTGCAACGTGTTTGAC+AGG | 0.460366 | 1_3:-7842164 | Msa0101250:CDS |
| AGCCTTGACAAGAATTGCTT+GGG | 0.460705 | 1_3:-7841436 | Msa0101250:CDS |
| TACCGCAGGTCAGCATGATC+AGG | 0.461449 | 1_3:+7841593 | None:intergenic |
| TGCGATCCTTGCAACTCGTA+TGG | 0.462885 | 1_3:-7837522 | Msa0101250:CDS |
| CTTCCTCTGCCTGGGAGACA+AGG | 0.464656 | 1_3:+7846368 | None:intergenic |
| GATAAGATGATCTTCTGCTT+AGG | 0.468986 | 1_3:+7849758 | None:intergenic |
| TTGCCGTTAACAACACCTCC+TGG | 0.473791 | 1_3:+7840867 | None:intergenic |
| TATCCCACTTCTGGTGGATG+AGG | 0.473804 | 1_3:-7841020 | Msa0101250:intron |
| TCAGTCATAGCGGAAGCAAC+AGG | 0.474576 | 1_3:+7846421 | None:intergenic |
| GAGCCTTGACAAGAATTGCT+TGG | 0.477359 | 1_3:-7841437 | Msa0101250:CDS |
| ACATCTATACCAACGACCTT+AGG | 0.483257 | 1_3:+7847330 | None:intergenic |
| AGATGGTCAAGATGCAAAGA+AGG | 0.483558 | 1_3:+7847376 | None:intergenic |
| CAGATGTGAATGTCTCATTA+GGG | 0.490732 | 1_3:+7835078 | None:intergenic |
| GAACGGAATGTTCGCCAAAT+GGG | 0.491396 | 1_3:-7838666 | Msa0101250:CDS |
| TGCCAACATTGTGCCCACTT+TGG | 0.493261 | 1_3:-7836782 | Msa0101250:CDS |
| TGTAGGATAGAACACCCATT+TGG | 0.494048 | 1_3:+7838652 | None:intergenic |
| GCATAAGTGAGGTCAATATT+GGG | 0.495344 | 1_3:+7842059 | None:intergenic |
| TGTCTCCCAGGCAGAGGAAG+AGG | 0.497242 | 1_3:-7846365 | Msa0101250:CDS |
| CCAGGCAGAGGAAGAGGACA+TGG | 0.498118 | 1_3:-7846359 | Msa0101250:CDS |
| GGTCGCCTTCCTAAGGTCGT+TGG | 0.498133 | 1_3:-7847339 | Msa0101250:CDS |
| CCAGTTTGCTCGAAGGATTG+AGG | 0.499274 | 1_3:-7836559 | Msa0101250:CDS |
| TCGGCTTACCCCAGATAAGC+TGG | 0.499604 | 1_3:+7836115 | None:intergenic |
| AAATTACTTTGCTAGTTTGG+TGG | 0.505402 | 1_3:-7841758 | Msa0101250:CDS |
| TGCTTGGCGACCTAGAGTCT+CGG | 0.508432 | 1_3:-7838843 | Msa0101250:CDS |
| GTTGTTAACGGCAACAAAGC+TGG | 0.515692 | 1_3:-7840858 | Msa0101250:CDS |
| TAACAGCTTGCAAATGCAAT+CGG | 0.519484 | 1_3:-7842336 | Msa0101250:CDS |
| GTTCCTACACTTGTTCCTCC+AGG | 0.522078 | 1_3:-7840885 | Msa0101250:CDS |
| GGTCAGAAAGCTGATGCAGC+AGG | 0.525891 | 1_3:-7838880 | Msa0101250:CDS |
| CTAGAGAGAGCAAGAACCCT+AGG | 0.526198 | 1_3:+7849665 | None:intergenic |
| GAGGTTCATTTGATGAAGAT+CGG | 0.527546 | 1_3:-7842142 | Msa0101250:CDS |
| TTTACCTCATCCACCAGAAG+TGG | 0.528959 | 1_3:+7841016 | None:intergenic |
| CTGCAAAACTATACAAGCTA+AGG | 0.529157 | 1_3:-7847805 | Msa0101250:CDS |
| TGCATTGATATGCAGCGTAA+AGG | 0.531677 | 1_3:+7838928 | None:intergenic |
| CTATATCCTCTCTCATGTGC+CGG | 0.533397 | 1_3:+7843461 | None:intergenic |
| ATGATAAAACTTGGCCAAAG+TGG | 0.534570 | 1_3:+7836768 | None:intergenic |
| GGCCAAAGTGGGCACAATGT+TGG | 0.535297 | 1_3:+7836780 | None:intergenic |
| ATTGCGGAGGAGCCACACTT+TGG | 0.535826 | 1_3:+7847540 | None:intergenic |
| TTTGACAGCCCAAGCTGGAA+AGG | 0.535949 | 1_3:+7836164 | None:intergenic |
| AGTAGATTTCGCCATTTCGC+CGG | 0.537886 | 1_3:+7849829 | None:intergenic |
| AGTACATTCAGGGACAGTCT+AGG | 0.538864 | 1_3:-7837496 | Msa0101250:CDS |
| CGTATGGAGCAGTACATTCA+GGG | 0.540146 | 1_3:-7837506 | Msa0101250:CDS |
| ATCAGATACTGTAGAAGTAT+CGG | 0.542477 | 1_3:+7841069 | None:intergenic |
| GTGTGTCGCAGGTGTTGTAT+GGG | 0.543774 | 1_3:-7843549 | Msa0101250:intron |
| TTTCCTACAGCATTAACAAA+GGG | 0.545010 | 1_3:-7848101 | Msa0101250:intron |
| AAGCGAGCCTTTAATAAATG+AGG | 0.548321 | 1_3:-7844647 | Msa0101250:intron |
| ATGTCCTGCACTTGTACCGC+AGG | 0.550211 | 1_3:+7841579 | None:intergenic |
| TCTCAAAGTTTCTTTCAGAT+CGG | 0.551116 | 1_3:-7849866 | Msa0101250:five_prime_UTR |
| GAGCCTTCAAGCCAAACAGT+TGG | 0.551912 | 1_3:+7841118 | None:intergenic |
| GGTCGTTGGTATAGATGTTG+TGG | 0.552064 | 1_3:-7847325 | Msa0101250:CDS |
| GTACATTCAGGGACAGTCTA+GGG | 0.552198 | 1_3:-7837495 | Msa0101250:CDS |
| TGGTATAGATGTTGTGGAGT+TGG | 0.552996 | 1_3:-7847319 | Msa0101250:CDS |
| GTCGTCACATGGCTAAACCT+AGG | 0.553281 | 1_3:-7849682 | Msa0101250:CDS |
| ACTCAGAGTAATGTGAAAGA+TGG | 0.555269 | 1_3:-7846448 | Msa0101250:CDS |
| AGACCTTGTCTCCCAGGCAG+AGG | 0.555832 | 1_3:-7846371 | Msa0101250:CDS |
| GAGTTCGTTGGCAAACTCAC+GGG | 0.558303 | 1_3:+7841168 | None:intergenic |
| TCTAATGTGCAGGTATGTCA+TGG | 0.560159 | 1_3:-7844755 | Msa0101250:intron |
| CTGACCTGCGGTACAAGTGC+AGG | 0.560980 | 1_3:-7841583 | Msa0101250:CDS |
| GCATAGATATCCGAGACTCT+AGG | 0.561277 | 1_3:+7838833 | None:intergenic |
| GACGATATGGATGAATGGTT+AGG | 0.561367 | 1_3:-7843502 | Msa0101250:CDS |
| TGCAGGTATGTCATGGGTGT+TGG | 0.561387 | 1_3:-7844748 | Msa0101250:intron |
| CGATGCGAAATATTGATGAC+AGG | 0.564291 | 1_3:-7847514 | Msa0101250:intron |
| ACTGGCCTGATGATAAAACT+TGG | 0.564945 | 1_3:+7836759 | None:intergenic |
| TTTCGCATCGTCCATTGCGG+AGG | 0.565572 | 1_3:+7847527 | None:intergenic |
| GTGTTCTATCCTACATTCCC+AGG | 0.567457 | 1_3:-7838644 | Msa0101250:intron |
| TTCCTTATGGGACAAATGCA+AGG | 0.570541 | 1_3:-7835948 | Msa0101250:intron |
| AAAGTGTGGCTCCTCCGCAA+TGG | 0.571456 | 1_3:-7847538 | Msa0101250:CDS |
| GCGGTTGCGTGTACCTTCTG+AGG | 0.571549 | 1_3:-7842270 | Msa0101250:intron |
| TGTACTAGCACGGAGTTCGT+TGG | 0.571800 | 1_3:+7841156 | None:intergenic |
| GTTCACCGTTGCACCTGAAG+AGG | 0.573911 | 1_3:-7836529 | Msa0101250:intron |
| TCGTCACATGGCTAAACCTA+GGG | 0.575321 | 1_3:-7849681 | Msa0101250:CDS |
| GACCCAAGCAATTCTTGTCA+AGG | 0.576128 | 1_3:+7841434 | None:intergenic |
| GGAGTTCGTTGGCAAACTCA+CGG | 0.578167 | 1_3:+7841167 | None:intergenic |
| CAAGCTTTCTAGTCGTCACA+TGG | 0.580101 | 1_3:-7849693 | Msa0101250:CDS |
| GGGCACTTCAAGACCGCGCA+AGG | 0.583310 | 1_3:+7842079 | None:intergenic |
| TGGCTTGAAGGCTCAACTAG+TGG | 0.583999 | 1_3:-7841109 | Msa0101250:CDS |
| CTAATGTGCAGGTATGTCAT+GGG | 0.585515 | 1_3:-7844754 | Msa0101250:intron |
| CGATAAGGGCATACCTCAGA+AGG | 0.586076 | 1_3:+7842257 | None:intergenic |
| TTGCATTTGTCCCATAAGGA+AGG | 0.588364 | 1_3:+7835950 | None:intergenic |
| ATCAAATTGAAAGAAATGAA+CGG | 0.588598 | 1_3:-7838683 | Msa0101250:CDS |
| CATTACTCTGAGTTGAAACA+GGG | 0.589470 | 1_3:+7846458 | None:intergenic |
| ATCCGTGTTTCCAAAAGTCA+CGG | 0.589908 | 1_3:-7849734 | Msa0101250:CDS |
| TGATAAAACTTGGCCAAAGT+GGG | 0.590443 | 1_3:+7836769 | None:intergenic |
| ACCCAAAACATCTTTAGAGA+TGG | 0.596278 | 1_3:+7847359 | None:intergenic |
| AAAATGTAGAAGCATGTGAA+TGG | 0.596677 | 1_3:-7842112 | Msa0101250:CDS |
| ATCGGAGAAACAACAAACTC+CGG | 0.596903 | 1_3:-7849848 | Msa0101250:five_prime_UTR |
| TCACTTCAGGATTTACTGGA+CGG | 0.597289 | 1_3:-7840089 | Msa0101250:CDS |
| CATGTGACGACTAGAAAGCT+TGG | 0.598169 | 1_3:+7849694 | None:intergenic |
| TTACGCTGCATATCAATGCA+TGG | 0.604703 | 1_3:-7838925 | Msa0101250:CDS |
| TTGTAGACGATATGGATGAA+TGG | 0.606497 | 1_3:-7843507 | Msa0101250:CDS |
| TTGCTGATTCACAAGCTCGC+CGG | 0.608321 | 1_3:+7849789 | None:intergenic |
| AAGTGGGCACAATGTTGGCA+AGG | 0.609563 | 1_3:+7836785 | None:intergenic |
| CCTCCTGGAGGAACAAGTGT+AGG | 0.612956 | 1_3:+7840882 | None:intergenic |
| AACAGCGGGGACAGTTGAAG+AGG | 0.617770 | 1_3:-7841616 | Msa0101250:intron |
| ATTTCCTACAGCATTAACAA+AGG | 0.620993 | 1_3:-7848102 | Msa0101250:intron |
| CAGAGTAATGTGAAAGATGG+TGG | 0.621486 | 1_3:-7846445 | Msa0101250:CDS |
| AAACTTGCTTCTTCGCCGGG+AGG | 0.622356 | 1_3:-7841383 | Msa0101250:intron |
| ACTAACCTCTTCAGGTGCAA+CGG | 0.625555 | 1_3:+7836524 | None:intergenic |
| CTATACCAACGACCTTAGGA+AGG | 0.627890 | 1_3:+7847334 | None:intergenic |
| TTACCTCATCCACCAGAAGT+GGG | 0.628965 | 1_3:+7841017 | None:intergenic |
| AAACACTTGCCTATTCTGAA+AGG | 0.631024 | 1_3:+7836924 | None:intergenic |
| TTTGCAACGTGTTTGACAGG+AGG | 0.631196 | 1_3:-7842161 | Msa0101250:CDS |
| CTCTCATGCTCGCATAAGTG+AGG | 0.634936 | 1_3:+7842048 | None:intergenic |
| GCACATTCAATGTTAAACTC+CGG | 0.636021 | 1_3:-7843480 | Msa0101250:CDS |
| CATGAGAGAGGATATAGCAT+CGG | 0.642742 | 1_3:-7843455 | Msa0101250:intron |
| ATATTTCGCATCGTCCATTG+CGG | 0.642787 | 1_3:+7847524 | None:intergenic |
| GGCCTGATCATGCTGACCTG+CGG | 0.645686 | 1_3:-7841595 | Msa0101250:CDS |
| TAGTGGATGTACATTTACAC+TGG | 0.646809 | 1_3:-7847747 | Msa0101250:intron |
| CCTACACTTGTTCCTCCAGG+AGG | 0.654770 | 1_3:-7840882 | Msa0101250:CDS |
| TAAACTCCGGCACATGAGAG+AGG | 0.656316 | 1_3:-7843467 | Msa0101250:CDS |
| AGCTTGATAAGCTTCTTGAG+CGG | 0.662867 | 1_3:-7842289 | Msa0101250:CDS |
| AGTGTAAATGTACATCCACT+AGG | 0.666732 | 1_3:+7847749 | None:intergenic |
| ACTGCTCCATACGAGTTGCA+AGG | 0.673914 | 1_3:+7837516 | None:intergenic |
| TAACCTTAGAAGCCAAAGTG+TGG | 0.674900 | 1_3:-7847552 | Msa0101250:CDS |
| GGCAGAGGAAGAGGACATGG+AGG | 0.686109 | 1_3:-7846356 | Msa0101250:CDS |
| CTGGCGACGATGTTGAACTC+CGG | 0.706984 | 1_3:-7849808 | Msa0101250:CDS |
| CAACTCTCTCTCAGTCATAG+CGG | 0.712038 | 1_3:+7846411 | None:intergenic |
| AAATAACAAATCTCTCATCG+AGG | 0.720933 | 1_3:-7842312 | Msa0101250:CDS |
| CCGTTAACAACACCTCCTGG+AGG | 0.723227 | 1_3:+7840870 | None:intergenic |
| TGGTTGACTAGTGCCTTGCG+CGG | 0.736160 | 1_3:-7842092 | Msa0101250:CDS |
| ATTACTCTGAGTTGAAACAG+GGG | 0.762722 | 1_3:+7846459 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAAAATTTAAAATTAT+AGG | + | chr1_3:7839438-7839457 | None:intergenic | 0.0% |
| !!! | ATTTTATATATATTTTTATT+TGG | - | chr1_3:7840544-7840563 | Msa0101250:intron | 0.0% |
| !! | AATTTATTATATAAAATTTA+AGG | - | chr1_3:7846884-7846903 | Msa0101250:intron | 0.0% |
| !! | TAATATTAATATGTTTGAAT+GGG | + | chr1_3:7837842-7837861 | None:intergenic | 10.0% |
| !! | ATAATATTAATATGTTTGAA+TGG | + | chr1_3:7837843-7837862 | None:intergenic | 10.0% |
| !! | CCTATATTATAAATAAAATT+TGG | + | chr1_3:7838581-7838600 | None:intergenic | 10.0% |
| !!! | CCAAATTTTATTTATAATAT+AGG | - | chr1_3:7838578-7838597 | Msa0101250:intron | 10.0% |
| !!! | AATATATGTATATTTTACAA+GGG | + | chr1_3:7838797-7838816 | None:intergenic | 10.0% |
| !!! | AAATATATGTATATTTTACA+AGG | + | chr1_3:7838798-7838817 | None:intergenic | 10.0% |
| !!! | AATATATGTATATTTTACAA+GGG | + | chr1_3:7838797-7838816 | None:intergenic | 10.0% |
| !!! | AAATATATGTATATTTTACA+AGG | + | chr1_3:7838798-7838817 | None:intergenic | 10.0% |
| !!! | TAACCATATTTTTAATTATA+AGG | - | chr1_3:7839019-7839038 | Msa0101250:intron | 10.0% |
| !!! | TCTTTTTTTTAATTAAAAAG+TGG | + | chr1_3:7840131-7840150 | None:intergenic | 10.0% |
| !!! | TATATTTTTATTTGGTTTAT+TGG | - | chr1_3:7840552-7840571 | Msa0101250:intron | 10.0% |
| !!! | AATATTATTTTAAACTCAAA+AGG | + | chr1_3:7842147-7842166 | None:intergenic | 10.0% |
| !! | AAAATAATATTACTTAGATT+TGG | - | chr1_3:7842156-7842175 | Msa0101250:CDS | 10.0% |
| !!! | ATATCTTTGAAAATAATTTA+TGG | - | chr1_3:7842182-7842201 | Msa0101250:intron | 10.0% |
| !!! | TTAATTTCTACAATTTTAAT+TGG | - | chr1_3:7842779-7842798 | Msa0101250:intron | 10.0% |
| !!! | TCTATAATTTTTTTTTTTGT+TGG | - | chr1_3:7844556-7844575 | Msa0101250:intron | 10.0% |
| !!! | GAAGTTTATTTATTTAATTT+TGG | - | chr1_3:7846436-7846455 | Msa0101250:CDS | 10.0% |
| !! | TATAATATCAACATATAATT+AGG | - | chr1_3:7847032-7847051 | Msa0101250:intron | 10.0% |
| !! | AAAATTAACTTTGATATGTT+TGG | - | chr1_3:7835732-7835751 | Msa0101250:intron | 15.0% |
| !!! | AAAGTGATTTTGTTTTATAA+GGG | - | chr1_3:7836506-7836525 | Msa0101250:intron | 15.0% |
| !! | ACAAAAACAAAAAATAAACA+CGG | + | chr1_3:7836861-7836880 | None:intergenic | 15.0% |
| !!! | GTTTATTTTTTGTTTTTGTT+TGG | - | chr1_3:7836862-7836881 | Msa0101250:intron | 15.0% |
| !! | AAATCAATTAAAAGTTAATG+AGG | + | chr1_3:7838042-7838061 | None:intergenic | 15.0% |
| !!! | TTTTTACAAAAATGTGAAAT+AGG | - | chr1_3:7838240-7838259 | Msa0101250:intron | 15.0% |
| !! | TTATTTATTTATTCAATTGC+TGG | - | chr1_3:7838494-7838513 | Msa0101250:intron | 15.0% |
| !! | TTATTTATAATATAGGTACA+TGG | - | chr1_3:7838585-7838604 | Msa0101250:intron | 15.0% |
| !! | TGTCCTTATAATTAAAAATA+TGG | + | chr1_3:7839025-7839044 | None:intergenic | 15.0% |
| !! | AAAAAAAACTTAAATCAGAA+GGG | + | chr1_3:7839349-7839368 | None:intergenic | 15.0% |
| !! | TAAAAAAAACTTAAATCAGA+AGG | + | chr1_3:7839350-7839369 | None:intergenic | 15.0% |
| !! | GTAAAATCTTAAATTTGAAT+TGG | - | chr1_3:7839381-7839400 | Msa0101250:intron | 15.0% |
| !!! | TTTGAAATTTTTTAGCAAAT+TGG | - | chr1_3:7839651-7839670 | Msa0101250:intron | 15.0% |
| !!! | TGTTTGTAATTTTTTTTCAA+GGG | - | chr1_3:7839702-7839721 | Msa0101250:intron | 15.0% |
| !! | TAAATAAAAAAATTGTCAGT+TGG | - | chr1_3:7839898-7839917 | Msa0101250:intron | 15.0% |
| !!! | CTTGTTACAAATTTTTTATT+TGG | + | chr1_3:7840964-7840983 | None:intergenic | 15.0% |
| !! | TTGCAAAATTTATACTTTAA+AGG | - | chr1_3:7841124-7841143 | Msa0101250:CDS | 15.0% |
| !! | GTAAAATAAGCAAATAAAAA+AGG | - | chr1_3:7842096-7842115 | Msa0101250:CDS | 15.0% |
| !!! | GATTAGAAATTTTAAAATAG+AGG | - | chr1_3:7842316-7842335 | Msa0101250:CDS | 15.0% |
| !! | AATTTCAAACATTTATTTAC+AGG | - | chr1_3:7843540-7843559 | Msa0101250:CDS | 15.0% |
| !! | AAAAAATTGTGTTGAAATAA+CGG | + | chr1_3:7843752-7843771 | None:intergenic | 15.0% |
| !! | ATAAAATGTATAATTCTTCA+TGG | - | chr1_3:7843778-7843797 | Msa0101250:intron | 15.0% |
| !!! | CATCTTTTAAAAATATCAAA+AGG | + | chr1_3:7844715-7844734 | None:intergenic | 15.0% |
| !!! | TATGAAGATATCATTTTATA+AGG | + | chr1_3:7845671-7845690 | None:intergenic | 15.0% |
| !!! | ATAATAAGAGATATTTTTCT+AGG | + | chr1_3:7846244-7846263 | None:intergenic | 15.0% |
| !!! | TATAATTTTTCCATCTATTT+TGG | - | chr1_3:7846602-7846621 | Msa0101250:intron | 15.0% |
| !! | TCAGAATTGTTAATTTAAAA+TGG | + | chr1_3:7846630-7846649 | None:intergenic | 15.0% |
| !!! | ATTTTAAATTAACAATTCTG+AGG | - | chr1_3:7846629-7846648 | Msa0101250:intron | 15.0% |
| !!! | AAATATTGACTTTTTAAAGT+AGG | + | chr1_3:7846656-7846675 | None:intergenic | 15.0% |
| !! | TTTAAATATATGATGAAAGT+TGG | - | chr1_3:7847007-7847026 | Msa0101250:intron | 15.0% |
| !! | TTAAATATATGATGAAAGTT+GGG | - | chr1_3:7847008-7847027 | Msa0101250:intron | 15.0% |
| !!! | TCTGAAATTGATAATATTTT+AGG | + | chr1_3:7848545-7848564 | None:intergenic | 15.0% |
| !! | ATTGTAAATTAAAACATGTT+GGG | - | chr1_3:7849436-7849455 | Msa0101250:intron | 15.0% |
| !!! | ATTTTTTTGTAAATACTTCT+AGG | - | chr1_3:7849485-7849504 | Msa0101250:intron | 15.0% |
| !!! | CTAAACAGTTATTATTTCTT+AGG | + | chr1_3:7835407-7835426 | None:intergenic | 20.0% |
| !! | CTAAGAAATAATAACTGTTT+AGG | - | chr1_3:7835405-7835424 | Msa0101250:intron | 20.0% |
| !! | TTAACAACTTACTATCAATT+TGG | + | chr1_3:7835947-7835966 | None:intergenic | 20.0% |
| !! | ATAGTAAGTTGTTAAAATAC+AGG | - | chr1_3:7835952-7835971 | Msa0101250:CDS | 20.0% |
| !! | TAGTAAGTTGTTAAAATACA+GGG | - | chr1_3:7835953-7835972 | Msa0101250:CDS | 20.0% |
| !!! | TTTTCGAAAATCTTTAACAA+CGG | - | chr1_3:7836394-7836413 | Msa0101250:intron | 20.0% |
| !!! | GAAAGTGATTTTGTTTTATA+AGG | - | chr1_3:7836505-7836524 | Msa0101250:intron | 20.0% |
| !! | TAATAATAACTTACTATGCA+TGG | - | chr1_3:7837546-7837565 | Msa0101250:intron | 20.0% |
| !! | GATTTACTCAAATTAAATCA+GGG | + | chr1_3:7837797-7837816 | None:intergenic | 20.0% |
| !! | TAGATTATAGATGTCTTAAT+TGG | - | chr1_3:7837862-7837881 | Msa0101250:intron | 20.0% |
| !!! | ACATATTTTGACAATTTTTG+TGG | + | chr1_3:7837951-7837970 | None:intergenic | 20.0% |
| !! | AAAAGTTAATGAGGTTAATT+TGG | + | chr1_3:7838033-7838052 | None:intergenic | 20.0% |
| !!! | CAAAAAATGACAATTGTTTT+AGG | - | chr1_3:7838165-7838184 | Msa0101250:intron | 20.0% |
| !! | ATTAAGTCCTTTAAATTCTA+GGG | - | chr1_3:7838517-7838536 | Msa0101250:intron | 20.0% |
| !! | TCAGATTAATTAAAAAAGAG+TGG | + | chr1_3:7839124-7839143 | None:intergenic | 20.0% |
| !!! | TGATATTTTAGTATCTATCA+AGG | - | chr1_3:7839612-7839631 | Msa0101250:intron | 20.0% |
| !!! | GTGTTTGTAATTTTTTTTCA+AGG | - | chr1_3:7839701-7839720 | Msa0101250:intron | 20.0% |
| !! | AGTAATACCTCATTTATTAA+AGG | + | chr1_3:7840094-7840113 | None:intergenic | 20.0% |
| !! | TAATAACAATCAAACAAAAG+TGG | + | chr1_3:7840166-7840185 | None:intergenic | 20.0% |
| !!! | AAAATTAAGAAGTACAAAAC+TGG | - | chr1_3:7840271-7840290 | Msa0101250:intron | 20.0% |
| !! | ATATATTGCATAGTGTATTT+AGG | + | chr1_3:7840511-7840530 | None:intergenic | 20.0% |
| !!! | TGTAAGATTTAAGATATTAC+AGG | + | chr1_3:7840628-7840647 | None:intergenic | 20.0% |
| !! | TTATTATCATAAATGTGAAG+TGG | + | chr1_3:7840800-7840819 | None:intergenic | 20.0% |
| !! | TGATAATAAATAAACACCAA+AGG | - | chr1_3:7840811-7840830 | Msa0101250:CDS | 20.0% |
| !! | ATATTATCCTTATTAACCTT+TGG | + | chr1_3:7840830-7840849 | None:intergenic | 20.0% |
| !!! | AGCATTTTTTATTTGTATGA+GGG | - | chr1_3:7841715-7841734 | Msa0101250:intron | 20.0% |
| !! | CAAAAGGAAGATATTAAAAA+GGG | + | chr1_3:7842131-7842150 | None:intergenic | 20.0% |
| !! | TCAAAAGGAAGATATTAAAA+AGG | + | chr1_3:7842132-7842151 | None:intergenic | 20.0% |
| !!! | TACTTTTTTGTTTGTTTTGA+TGG | - | chr1_3:7842345-7842364 | Msa0101250:CDS | 20.0% |
| !!! | AAATTGTATCTAATTTTAGC+TGG | - | chr1_3:7842499-7842518 | Msa0101250:intron | 20.0% |
| !! | ATCATTAAAATAAATAAGCC+AGG | + | chr1_3:7842534-7842553 | None:intergenic | 20.0% |
| !!! | TTTCTACAATTTTAATTGGT+TGG | - | chr1_3:7842783-7842802 | Msa0101250:intron | 20.0% |
| !! | AATCAAAATAGATGACTTTA+AGG | + | chr1_3:7842864-7842883 | None:intergenic | 20.0% |
| !!! | AATTAAAATCTACTTTTGTC+AGG | - | chr1_3:7842930-7842949 | Msa0101250:intron | 20.0% |
| !! | AATTCTTGGATTGAATTTAT+TGG | - | chr1_3:7843069-7843088 | Msa0101250:intron | 20.0% |
| !!! | TGATATTTTTAAAAGATGAG+AGG | - | chr1_3:7844717-7844736 | Msa0101250:CDS | 20.0% |
| !!! | GATATTTTTAAAAGATGAGA+GGG | - | chr1_3:7844718-7844737 | Msa0101250:CDS | 20.0% |
| !!! | TTTTCTTTAGAAATTATCGT+GGG | + | chr1_3:7844964-7844983 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTAGAAATTATCG+TGG | + | chr1_3:7844965-7844984 | None:intergenic | 20.0% |
| !! | ATCTTGAGATATACAAAATA+TGG | - | chr1_3:7845128-7845147 | Msa0101250:intron | 20.0% |
| !! | TTCTATATACAAAAAGACAT+AGG | - | chr1_3:7845480-7845499 | Msa0101250:intron | 20.0% |
| !!! | GTTTTCCAATTAAATGAATT+GGG | + | chr1_3:7846000-7846019 | None:intergenic | 20.0% |
| !!! | AGTTTTCCAATTAAATGAAT+TGG | + | chr1_3:7846001-7846020 | None:intergenic | 20.0% |
| !!! | TCATTTAATTGGAAAACTTT+TGG | - | chr1_3:7846003-7846022 | Msa0101250:intron | 20.0% |
| !! | ATCAAATTGAAAGAAATGAA+CGG | - | chr1_3:7846048-7846067 | Msa0101250:intron | 20.0% |
| !! | ACAGCTAATTATATAAAGTT+TGG | - | chr1_3:7846207-7846226 | Msa0101250:intron | 20.0% |
| !!! | ATTATATAAAGTTTGGAACA+TGG | - | chr1_3:7846214-7846233 | Msa0101250:intron | 20.0% |
| !! | TATCTTTAATGAATACAAGA+TGG | + | chr1_3:7846287-7846306 | None:intergenic | 20.0% |
| !! | ATAAATAAACTTCACTCAAA+AGG | + | chr1_3:7846429-7846448 | None:intergenic | 20.0% |
| !! | TAAATATATGATGAAAGTTG+GGG | - | chr1_3:7847009-7847028 | Msa0101250:intron | 20.0% |
| !!! | TTACAAATTTTGTATATGCT+TGG | + | chr1_3:7847272-7847291 | None:intergenic | 20.0% |
| !! | TGAGAAAAAGATGAAAAATA+GGG | + | chr1_3:7848065-7848084 | None:intergenic | 20.0% |
| !! | TTGAGAAAAAGATGAAAAAT+AGG | + | chr1_3:7848066-7848085 | None:intergenic | 20.0% |
| !!! | AAAAAAAGTGATAATGAGTT+GGG | + | chr1_3:7848117-7848136 | None:intergenic | 20.0% |
| !!! | AAAAAAAAGTGATAATGAGT+TGG | + | chr1_3:7848118-7848137 | None:intergenic | 20.0% |
| !! | TTATACAAGAATTCTAGATA+TGG | + | chr1_3:7848287-7848306 | None:intergenic | 20.0% |
| !! | CTTAAAGTAAAATTCCTTAT+AGG | - | chr1_3:7848354-7848373 | Msa0101250:intron | 20.0% |
| !! | TATAAAACATACATCCTATA+AGG | + | chr1_3:7848371-7848390 | None:intergenic | 20.0% |
| !!! | GATAATATTTTAGGATTTTC+AGG | + | chr1_3:7848536-7848555 | None:intergenic | 20.0% |
| !! | TATTTAAAGAAGAAAAGAGT+CGG | + | chr1_3:7848638-7848657 | None:intergenic | 20.0% |
| !! | TAACTGAATTACTGTAAATA+AGG | + | chr1_3:7848845-7848864 | None:intergenic | 20.0% |
| !! | TTACAGTAATTCAGTTAATA+AGG | - | chr1_3:7848848-7848867 | Msa0101250:intron | 20.0% |
| !!! | CTAAGATAAATATGCAATTT+TGG | - | chr1_3:7848907-7848926 | Msa0101250:intron | 20.0% |
| !! | AATAGTTTCACCATATTATT+CGG | + | chr1_3:7849041-7849060 | None:intergenic | 20.0% |
| !! | GATTGTAAATTAAAACATGT+TGG | - | chr1_3:7849435-7849454 | Msa0101250:intron | 20.0% |
| !! | AACAAAAAAAGATTAGAAGA+TGG | + | chr1_3:7849748-7849767 | None:intergenic | 20.0% |
| !! | TCATTTTCTCAAATAACTAC+CGG | + | chr1_3:7835251-7835270 | None:intergenic | 25.0% |
| !! | GTTTTATAATGCATAAGCTA+TGG | - | chr1_3:7835427-7835446 | Msa0101250:intron | 25.0% |
| !!! | TACATCTCTAGAATCAAATA+TGG | + | chr1_3:7835713-7835732 | None:intergenic | 25.0% |
| ! | ACTCTAATAAAATGTCAAGT+TGG | + | chr1_3:7836014-7836033 | None:intergenic | 25.0% |
| ! | AACGGATAAAACTTTCAAAA+AGG | - | chr1_3:7836412-7836431 | Msa0101250:intron | 25.0% |
| ! | ACGGATAAAACTTTCAAAAA+GGG | - | chr1_3:7836413-7836432 | Msa0101250:intron | 25.0% |
| !!! | TGATTTTGTTTTATAAGGGA+TGG | - | chr1_3:7836510-7836529 | Msa0101250:intron | 25.0% |
| ! | GAAATTTAACAAATGATCAC+AGG | + | chr1_3:7836578-7836597 | None:intergenic | 25.0% |
| ! | TTTCACATTTCTGTTATTGT+TGG | - | chr1_3:7836594-7836613 | Msa0101250:intron | 25.0% |
| ! | CCAAATAAAAGAGAATAAAG+GGG | + | chr1_3:7836725-7836744 | None:intergenic | 25.0% |
| ! | CCCAAATAAAAGAGAATAAA+GGG | + | chr1_3:7836726-7836745 | None:intergenic | 25.0% |
| !!! | CCCTTTATTCTCTTTTATTT+GGG | - | chr1_3:7836723-7836742 | Msa0101250:CDS | 25.0% |
| ! | TCCCAAATAAAAGAGAATAA+AGG | + | chr1_3:7836727-7836746 | None:intergenic | 25.0% |
| ! | ACAAGAAACTAGTTAATAGA+AGG | + | chr1_3:7836897-7836916 | None:intergenic | 25.0% |
| ! | AGCATAAGATCTTTCATTTA+TGG | + | chr1_3:7837017-7837036 | None:intergenic | 25.0% |
| ! | AATTCAAGAAGCAAATGATT+AGG | + | chr1_3:7837129-7837148 | None:intergenic | 25.0% |
| !! | TCTAAGAGTGTATAATTTAG+TGG | - | chr1_3:7837261-7837280 | Msa0101250:intron | 25.0% |
| !!! | TGTTTTGAAATTTTGAGTAG+AGG | - | chr1_3:7837642-7837661 | Msa0101250:intron | 25.0% |
| !!! | GTTTTGAAATTTTGAGTAGA+GGG | - | chr1_3:7837643-7837662 | Msa0101250:intron | 25.0% |
| ! | CACTTAAAAACATCAAAACA+AGG | + | chr1_3:7837706-7837725 | None:intergenic | 25.0% |
| !!! | TGTTTTGATGTTTTTAAGTG+AGG | - | chr1_3:7837706-7837725 | Msa0101250:intron | 25.0% |
| ! | AATTTCTAACTCTCAAGTAA+GGG | + | chr1_3:7837752-7837771 | None:intergenic | 25.0% |
| ! | TAATTTCTAACTCTCAAGTA+AGG | + | chr1_3:7837753-7837772 | None:intergenic | 25.0% |
| ! | GGATTTACTCAAATTAAATC+AGG | + | chr1_3:7837798-7837817 | None:intergenic | 25.0% |
| !! | TTTTGACAATTTTTGTGGAA+TGG | + | chr1_3:7837946-7837965 | None:intergenic | 25.0% |
| !! | ATGTCATTTCACACAAATTA+AGG | - | chr1_3:7837967-7837986 | Msa0101250:intron | 25.0% |
| !!! | TATGACTTAGAAGGTATTAT+TGG | - | chr1_3:7838115-7838134 | Msa0101250:intron | 25.0% |
| ! | TGACAATTAATATGAGACAA+AGG | - | chr1_3:7838208-7838227 | Msa0101250:intron | 25.0% |
| ! | GACAATTAATATGAGACAAA+GGG | - | chr1_3:7838209-7838228 | Msa0101250:intron | 25.0% |
| ! | CTTTGACTCAAATGATATTA+AGG | - | chr1_3:7838426-7838445 | Msa0101250:intron | 25.0% |
| ! | GATTAAGTCCTTTAAATTCT+AGG | - | chr1_3:7838516-7838535 | Msa0101250:intron | 25.0% |
| ! | TTTGGCTAGAAATTGTATAA+AGG | + | chr1_3:7838563-7838582 | None:intergenic | 25.0% |
| !!! | TAAGGGTATAACTACAATTT+TGG | + | chr1_3:7838630-7838649 | None:intergenic | 25.0% |
| ! | AATTGTAGTTATACCCTTAT+TGG | - | chr1_3:7838631-7838650 | Msa0101250:intron | 25.0% |
| ! | ATTGTAGTTATACCCTTATT+GGG | - | chr1_3:7838632-7838651 | Msa0101250:intron | 25.0% |
| ! | AAACATTTATCTAATGCCAA+AGG | + | chr1_3:7838712-7838731 | None:intergenic | 25.0% |
| !!! | GGTGGTCAAAATTTTAATAA+GGG | - | chr1_3:7838949-7838968 | Msa0101250:CDS | 25.0% |
| ! | TTAGTCCATAAAACATTACA+CGG | + | chr1_3:7838991-7839010 | None:intergenic | 25.0% |
| ! | ATAGCATGTCTATATATTTG+TGG | - | chr1_3:7839093-7839112 | Msa0101250:intron | 25.0% |
| ! | TAAAATTATAGGACATAGCA+TGG | + | chr1_3:7839427-7839446 | None:intergenic | 25.0% |
| !! | AATTGGCATTTTCAATTCTT+AGG | - | chr1_3:7839668-7839687 | Msa0101250:intron | 25.0% |
| !! | ATTGGCATTTTCAATTCTTA+GGG | - | chr1_3:7839669-7839688 | Msa0101250:intron | 25.0% |
| !!! | TTTTTTTTCAAGGGTATCTT+TGG | - | chr1_3:7839711-7839730 | Msa0101250:intron | 25.0% |
| !!! | TTTTTTTCAAGGGTATCTTT+GGG | - | chr1_3:7839712-7839731 | Msa0101250:intron | 25.0% |
| !! | TAATATTTTCTCAAGAGTGA+AGG | + | chr1_3:7839738-7839757 | None:intergenic | 25.0% |
| !!! | CCAGAAAATTTTGATGATAA+GGG | + | chr1_3:7839775-7839794 | None:intergenic | 25.0% |
| !!! | TCCAGAAAATTTTGATGATA+AGG | + | chr1_3:7839776-7839795 | None:intergenic | 25.0% |
| ! | ACATATGAATTCTCTAAACT+AGG | + | chr1_3:7839824-7839843 | None:intergenic | 25.0% |
| !! | ATTAAGATTTTCTAATGTGC+AGG | - | chr1_3:7839966-7839985 | Msa0101250:intron | 25.0% |
| !! | ATTTTTAATGATCTCCAAGT+TGG | + | chr1_3:7840205-7840224 | None:intergenic | 25.0% |
| ! | TCAATTCTTGTTGCAAATTT+GGG | + | chr1_3:7840252-7840271 | None:intergenic | 25.0% |
| ! | TTCAATTCTTGTTGCAAATT+TGG | + | chr1_3:7840253-7840272 | None:intergenic | 25.0% |
| !! | CATCTTGAATGATCATATTT+TGG | + | chr1_3:7840314-7840333 | None:intergenic | 25.0% |
| ! | AAACTAAAGCTAGATTGATT+AGG | - | chr1_3:7840351-7840370 | Msa0101250:intron | 25.0% |
| ! | TAAGAACTGTAAAAGATAGA+GGG | - | chr1_3:7840381-7840400 | Msa0101250:intron | 25.0% |
| ! | TTGACCTTTATATTGTTAGA+TGG | - | chr1_3:7840449-7840468 | Msa0101250:intron | 25.0% |
| ! | TCATCCATCTAACAATATAA+AGG | + | chr1_3:7840456-7840475 | None:intergenic | 25.0% |
| ! | TTATATTGTTAGATGGATGA+TGG | - | chr1_3:7840456-7840475 | Msa0101250:intron | 25.0% |
| !! | TTGAAAATGACACTCTTTTT+GGG | + | chr1_3:7840697-7840716 | None:intergenic | 25.0% |
| !! | ATTGAAAATGACACTCTTTT+TGG | + | chr1_3:7840698-7840717 | None:intergenic | 25.0% |
| ! | TAACTAGACAATACAATTGA+GGG | + | chr1_3:7840745-7840764 | None:intergenic | 25.0% |
| ! | TTAACTAGACAATACAATTG+AGG | + | chr1_3:7840746-7840765 | None:intergenic | 25.0% |
| ! | GAAGTGGAAAATAATGATTT+GGG | + | chr1_3:7840784-7840803 | None:intergenic | 25.0% |
| ! | TGAAGTGGAAAATAATGATT+TGG | + | chr1_3:7840785-7840804 | None:intergenic | 25.0% |
| ! | ATAAACACCAAAGGTTAATA+AGG | - | chr1_3:7840820-7840839 | Msa0101250:CDS | 25.0% |
| ! | GATTAAGAAAAGATGACAAA+TGG | + | chr1_3:7840877-7840896 | None:intergenic | 25.0% |
| !! | TTTTCTTAATCTGTGTGAAA+TGG | - | chr1_3:7840886-7840905 | Msa0101250:CDS | 25.0% |
| ! | GTATAACAGAGAAAACAAAA+GGG | + | chr1_3:7841505-7841524 | None:intergenic | 25.0% |
| ! | AGTATAACAGAGAAAACAAA+AGG | + | chr1_3:7841506-7841525 | None:intergenic | 25.0% |
| ! | TATTTCCATTTCTGTTCTTA+AGG | + | chr1_3:7841571-7841590 | None:intergenic | 25.0% |
| !!! | TCTTTCTTTCAGTTTTAAAC+TGG | + | chr1_3:7841659-7841678 | None:intergenic | 25.0% |
| !!! | GAGCATTTTTTATTTGTATG+AGG | - | chr1_3:7841714-7841733 | Msa0101250:intron | 25.0% |
| !!! | GCATTTTTTATTTGTATGAG+GGG | - | chr1_3:7841716-7841735 | Msa0101250:intron | 25.0% |
| ! | AGAGTAAAATTCTCGTATTA+AGG | - | chr1_3:7841825-7841844 | Msa0101250:CDS | 25.0% |
| ! | GAGTAAAATTCTCGTATTAA+GGG | - | chr1_3:7841826-7841845 | Msa0101250:CDS | 25.0% |
| ! | TAGATACAATTTACCGATAA+GGG | + | chr1_3:7842491-7842510 | None:intergenic | 25.0% |
| ! | TTAGATACAATTTACCGATA+AGG | + | chr1_3:7842492-7842511 | None:intergenic | 25.0% |
| !!! | TTATTTTAATGATGCCTTTG+TGG | - | chr1_3:7842541-7842560 | Msa0101250:intron | 25.0% |
| !!! | TATTTTAATGATGCCTTTGT+GGG | - | chr1_3:7842542-7842561 | Msa0101250:intron | 25.0% |
| !!! | AATTGAGAGTACTATGAATA+TGG | - | chr1_3:7842810-7842829 | Msa0101250:intron | 25.0% |
| !! | ATACTCTGGAAAATTTGTAT+GGG | - | chr1_3:7842837-7842856 | Msa0101250:intron | 25.0% |
| !!! | TGATAAAAGTTACTTTTCTC+AGG | - | chr1_3:7843009-7843028 | Msa0101250:intron | 25.0% |
| !!! | AATCGTTACTTTTGAATTCT+TGG | - | chr1_3:7843055-7843074 | Msa0101250:intron | 25.0% |
| ! | AAGATAAAAAAAGCAAGTTG+TGG | + | chr1_3:7843431-7843450 | None:intergenic | 25.0% |
| !!! | ATGCTTTGCTTTTTATGTTT+TGG | - | chr1_3:7843496-7843515 | Msa0101250:CDS | 25.0% |
| ! | TTTATTGAGTGAAATCAATG+TGG | + | chr1_3:7844123-7844142 | None:intergenic | 25.0% |
| ! | CATTAGATATAACTTCAAAG+AGG | + | chr1_3:7844179-7844198 | None:intergenic | 25.0% |
| ! | AAAACCTTGTTGAATGTTTA+TGG | + | chr1_3:7844236-7844255 | None:intergenic | 25.0% |
| ! | TTAATCTAAATCTCCTGTAA+TGG | + | chr1_3:7844443-7844462 | None:intergenic | 25.0% |
| ! | TTAAACAGAGGTTTATTGTA+TGG | - | chr1_3:7844459-7844478 | Msa0101250:intron | 25.0% |
| !!! | CAGAATTTTTTCCTACAAAA+TGG | + | chr1_3:7844599-7844618 | None:intergenic | 25.0% |
| !! | TGGAAGAAGTTATTTCATTA+AGG | - | chr1_3:7844899-7844918 | Msa0101250:intron | 25.0% |
| ! | AAAATATTTAGAAGCCAAGT+GGG | - | chr1_3:7844980-7844999 | Msa0101250:intron | 25.0% |
| !!! | GATTGTTTGAGTTCATTTTT+GGG | + | chr1_3:7845111-7845130 | None:intergenic | 25.0% |
| !!! | AGATTGTTTGAGTTCATTTT+TGG | + | chr1_3:7845112-7845131 | None:intergenic | 25.0% |
| ! | ATATACAAAATATGGACAGA+GGG | - | chr1_3:7845136-7845155 | Msa0101250:intron | 25.0% |
| ! | ATACAAAAGTCCAATAATGT+TGG | + | chr1_3:7845624-7845643 | None:intergenic | 25.0% |
| ! | ATCTTTATAGCTGTAAAATC+TGG | + | chr1_3:7845724-7845743 | None:intergenic | 25.0% |
| ! | AAGATGCTTTATATGATTTC+AGG | - | chr1_3:7845739-7845758 | Msa0101250:intron | 25.0% |
| ! | AATAGTCTTCTTCAATATAC+CGG | + | chr1_3:7845943-7845962 | None:intergenic | 25.0% |
| ! | ACTAACCCAATTCATTTAAT+TGG | - | chr1_3:7845992-7846011 | Msa0101250:intron | 25.0% |
| ! | GTTCATTTCTTTCAATTTGA+TGG | + | chr1_3:7846049-7846068 | None:intergenic | 25.0% |
| ! | AAGAGGAAAAGTAGAAAATA+TGG | + | chr1_3:7846123-7846142 | None:intergenic | 25.0% |
| ! | AAAAGAACATCCTAATTCTT+TGG | + | chr1_3:7846155-7846174 | None:intergenic | 25.0% |
| ! | CTTTATATAATTAGCTGTGA+AGG | + | chr1_3:7846205-7846224 | None:intergenic | 25.0% |
| !! | TACATTTTTGTTCTAGTACT+CGG | - | chr1_3:7846316-7846335 | Msa0101250:intron | 25.0% |
| ! | TAATCCATTTCATGTTGTTA+TGG | + | chr1_3:7846544-7846563 | None:intergenic | 25.0% |
| ! | TGAGACACTTAATATTTGTA+AGG | - | chr1_3:7846769-7846788 | Msa0101250:intron | 25.0% |
| ! | ATCAAATCAAATGGATATCA+AGG | + | chr1_3:7846801-7846820 | None:intergenic | 25.0% |
| ! | GAATCACTTACAAAAAAAAC+AGG | + | chr1_3:7847316-7847335 | None:intergenic | 25.0% |
| !!! | TACTGTCTTGGTATTTTTAT+GGG | - | chr1_3:7847367-7847386 | Msa0101250:CDS | 25.0% |
| ! | CATTTAGTAATAGAGTAAAC+AGG | + | chr1_3:7847457-7847476 | None:intergenic | 25.0% |
| ! | ATCGAGAAAATTATAGTAGT+TGG | + | chr1_3:7847557-7847576 | None:intergenic | 25.0% |
| !! | TCAATCTACTGATTAACTAT+TGG | - | chr1_3:7847679-7847698 | Msa0101250:intron | 25.0% |
| ! | TTAACTATTGGCATAATGTT+TGG | - | chr1_3:7847691-7847710 | Msa0101250:intron | 25.0% |
| !!! | TGTTTGTGATATTTTTTCCA+AGG | + | chr1_3:7847744-7847763 | None:intergenic | 25.0% |
| ! | AGAAAAATATCTGCATACTT+TGG | + | chr1_3:7847770-7847789 | None:intergenic | 25.0% |
| ! | AGTATATGATCATGCTAATA+TGG | + | chr1_3:7848024-7848043 | None:intergenic | 25.0% |
| ! | AGAAAAAGATGAAAAATAGG+GGG | + | chr1_3:7848063-7848082 | None:intergenic | 25.0% |
| ! | GAGAAAAAGATGAAAAATAG+GGG | + | chr1_3:7848064-7848083 | None:intergenic | 25.0% |
| ! | AGAATTCTTGTATAACAAAC+AGG | - | chr1_3:7848292-7848311 | Msa0101250:intron | 25.0% |
| ! | AAGTTGTACTTATTCCTTAT+TGG | - | chr1_3:7848807-7848826 | Msa0101250:intron | 25.0% |
| !! | TGTAAATAAGGTATCTTAGT+TGG | + | chr1_3:7848833-7848852 | None:intergenic | 25.0% |
| !! | ATTTTGGATACACATGTAAA+AGG | - | chr1_3:7848923-7848942 | Msa0101250:intron | 25.0% |
| ! | ACATGTAAAAGGCAATTAAT+TGG | - | chr1_3:7848934-7848953 | Msa0101250:intron | 25.0% |
| ! | AATGTGAGATATCATTCAAA+TGG | + | chr1_3:7849158-7849177 | None:intergenic | 25.0% |
| !! | TTAGAAATCCATTTTCACAT+TGG | + | chr1_3:7849214-7849233 | None:intergenic | 25.0% |
| !! | TCTAATATGCTGTATTTTGT+TGG | - | chr1_3:7849229-7849248 | Msa0101250:intron | 25.0% |
| !! | CTAATATGCTGTATTTTGTT+GGG | - | chr1_3:7849230-7849249 | Msa0101250:intron | 25.0% |
| !!! | TTACTCAGGTATTGAAATTT+AGG | + | chr1_3:7849272-7849291 | None:intergenic | 25.0% |
| !!! | AAGCATCAGCAATTTATTTT+GGG | + | chr1_3:7849334-7849353 | None:intergenic | 25.0% |
| !! | ATTTCTTTTACAAGTTGCTT+AGG | - | chr1_3:7849361-7849380 | Msa0101250:intron | 25.0% |
| TCTCAAAGTTTCTTTCAGAT+CGG | - | chr1_3:7834865-7834884 | Msa0101250:three_prime_UTR | 30.0% | |
| GCATAAGCAAAAGTGAAATT+AGG | + | chr1_3:7835098-7835117 | None:intergenic | 30.0% | |
| TTGACTGTTATTACATGTGT+CGG | - | chr1_3:7835276-7835295 | Msa0101250:intron | 30.0% | |
| ATTTGACGATGAAATGTAGA+AGG | - | chr1_3:7835355-7835374 | Msa0101250:intron | 30.0% | |
| ! | ACATACATTTAGGGTTTGTT+TGG | + | chr1_3:7835669-7835688 | None:intergenic | 30.0% |
| ACAAACCCTAAATGTATGTT+TGG | - | chr1_3:7835670-7835689 | Msa0101250:intron | 30.0% | |
| TGGAACCAAACATACATTTA+GGG | + | chr1_3:7835678-7835697 | None:intergenic | 30.0% | |
| ! | GAGACTAAATTGATAGTTAG+TGG | - | chr1_3:7835908-7835927 | Msa0101250:intron | 30.0% |
| ACAGTAAGTGGTTAAGTATA+GGG | - | chr1_3:7835987-7836006 | Msa0101250:CDS | 30.0% | |
| ! | TTTGAAATAGTCGTAATCTC+AGG | - | chr1_3:7836044-7836063 | Msa0101250:intron | 30.0% |
| TTGAAATAGTCGTAATCTCA+GGG | - | chr1_3:7836045-7836064 | Msa0101250:intron | 30.0% | |
| ! | AAATCAGTCTTTAACTTTGC+AGG | + | chr1_3:7836087-7836106 | None:intergenic | 30.0% |
| TGCAAAGTTAAAGACTGATT+TGG | - | chr1_3:7836086-7836105 | Msa0101250:intron | 30.0% | |
| !! | AAAGTTAAAGACTGATTTGG+CGG | - | chr1_3:7836089-7836108 | Msa0101250:intron | 30.0% |
| ! | ATTTTTGTGAGATAGCTAGT+TGG | - | chr1_3:7836151-7836170 | Msa0101250:CDS | 30.0% |
| ! | GACTTGTGATTGATTTCATT+TGG | - | chr1_3:7836545-7836564 | Msa0101250:CDS | 30.0% |
| ATTTCCTACAGCATTAACAA+AGG | - | chr1_3:7836629-7836648 | Msa0101250:intron | 30.0% | |
| TTTCCTACAGCATTAACAAA+GGG | - | chr1_3:7836630-7836649 | Msa0101250:intron | 30.0% | |
| !!! | TCGAGTTTTGAAGTATTCTA+CGG | - | chr1_3:7836674-7836693 | Msa0101250:intron | 30.0% |
| AATAAAAGAGAATAAAGGGG+TGG | + | chr1_3:7836722-7836741 | None:intergenic | 30.0% | |
| ! | CCCCTTTATTCTCTTTTATT+TGG | - | chr1_3:7836722-7836741 | Msa0101250:CDS | 30.0% |
| ATGAAAAACAACAGTCAAAG+AGG | + | chr1_3:7836837-7836856 | None:intergenic | 30.0% | |
| ATGAATGCATATGTCTTGTA+GGG | - | chr1_3:7837150-7837169 | Msa0101250:intron | 30.0% | |
| !! | ACCATCTCTAAAGATGTTTT+GGG | - | chr1_3:7837371-7837390 | Msa0101250:intron | 30.0% |
| !! | TAAAGAAGCACTTATAAGAC+TGG | + | chr1_3:7837471-7837490 | None:intergenic | 30.0% |
| TATTCATTAGAACAGAACCA+CGG | + | chr1_3:7837505-7837524 | None:intergenic | 30.0% | |
| !!! | TGTTTTTAAGTGAGGAAAGA+AGG | - | chr1_3:7837714-7837733 | Msa0101250:intron | 30.0% |
| TCAGTGGAAAATAATACCTT+CGG | - | chr1_3:7838078-7838097 | Msa0101250:intron | 30.0% | |
| TACACACAATATGACTTAGA+AGG | - | chr1_3:7838106-7838125 | Msa0101250:intron | 30.0% | |
| TACGATTAGTAAGAATATGC+TGG | - | chr1_3:7838458-7838477 | Msa0101250:intron | 30.0% | |
| ATAATATAGGTACATGGACA+AGG | - | chr1_3:7838591-7838610 | Msa0101250:intron | 30.0% | |
| TCCCTACCTTCTATAAAAAT+GGG | - | chr1_3:7838928-7838947 | Msa0101250:CDS | 30.0% | |
| !! | ACCCATTTTTATAGAAGGTA+GGG | + | chr1_3:7838932-7838951 | None:intergenic | 30.0% |
| !! | GGGTGGTCAAAATTTTAATA+AGG | - | chr1_3:7838948-7838967 | Msa0101250:CDS | 30.0% |
| ! | AAGATCCGTGTAATGTTTTA+TGG | - | chr1_3:7838983-7839002 | Msa0101250:intron | 30.0% |
| ! | GATCAGTTTCTTTTCAATAG+TGG | - | chr1_3:7839161-7839180 | Msa0101250:intron | 30.0% |
| !!! | TTTTTTTCCCACAAGACTAA+TGG | - | chr1_3:7839250-7839269 | Msa0101250:intron | 30.0% |
| !!! | TTTTTTCCCACAAGACTAAT+GGG | - | chr1_3:7839251-7839270 | Msa0101250:intron | 30.0% |
| ! | CCCTTATCATCAAAATTTTC+TGG | - | chr1_3:7839772-7839791 | Msa0101250:intron | 30.0% |
| ! | TAAACTAGGAAGTATGGATA+CGG | + | chr1_3:7839810-7839829 | None:intergenic | 30.0% |
| ATTCTCTAAACTAGGAAGTA+TGG | + | chr1_3:7839816-7839835 | None:intergenic | 30.0% | |
| TTCTTTGATATGATCCAACT+TGG | - | chr1_3:7840188-7840207 | Msa0101250:intron | 30.0% | |
| CTTGGAGATCATTAAAAATG+AGG | - | chr1_3:7840206-7840225 | Msa0101250:intron | 30.0% | |
| AAATTTGGGTACAAGTTGTA+CGG | + | chr1_3:7840238-7840257 | None:intergenic | 30.0% | |
| CTAAGAACTGTAAAAGATAG+AGG | - | chr1_3:7840380-7840399 | Msa0101250:intron | 30.0% | |
| ! | AAAGATAGAGGGTGTATAAT+AGG | - | chr1_3:7840392-7840411 | Msa0101250:intron | 30.0% |
| ! | AAGATAGAGGGTGTATAATA+GGG | - | chr1_3:7840393-7840412 | Msa0101250:intron | 30.0% |
| TATAATAGGGTGAACAAACA+GGG | - | chr1_3:7840406-7840425 | Msa0101250:intron | 30.0% | |
| AACTAGACAATACAATTGAG+GGG | + | chr1_3:7840744-7840763 | None:intergenic | 30.0% | |
| TCAAATGTGACAGTTATTGA+GGG | - | chr1_3:7840909-7840928 | Msa0101250:CDS | 30.0% | |
| GCTTAAAGCTTAATATGCTT+TGG | - | chr1_3:7840983-7841002 | Msa0101250:intron | 30.0% | |
| ATATATATTTAACCCTCCTC+AGG | + | chr1_3:7841009-7841028 | None:intergenic | 30.0% | |
| AACAAATGTTGTAGACGATA+TGG | - | chr1_3:7841216-7841235 | Msa0101250:intron | 30.0% | |
| GTACAACTTTGTGTTTGTAA+TGG | - | chr1_3:7841344-7841363 | Msa0101250:intron | 30.0% | |
| !! | TTTGTAATGGTAGTGTTTTC+TGG | - | chr1_3:7841357-7841376 | Msa0101250:intron | 30.0% |
| ! | TGCGTTGTGTTCAATTTTTA+TGG | - | chr1_3:7841454-7841473 | Msa0101250:intron | 30.0% |
| TTTCTGTTCTTAAGGACTTT+GGG | + | chr1_3:7841563-7841582 | None:intergenic | 30.0% | |
| ATTTCTGTTCTTAAGGACTT+TGG | + | chr1_3:7841564-7841583 | None:intergenic | 30.0% | |
| AAAGTCCTTAAGAACAGAAA+TGG | - | chr1_3:7841563-7841582 | Msa0101250:CDS | 30.0% | |
| AAAATGCTCCAAATTAAGCA+GGG | + | chr1_3:7841703-7841722 | None:intergenic | 30.0% | |
| AAAAATGCTCCAAATTAAGC+AGG | + | chr1_3:7841704-7841723 | None:intergenic | 30.0% | |
| AGTATTCAGCTGGAATAATA+AGG | - | chr1_3:7841749-7841768 | Msa0101250:CDS | 30.0% | |
| ACTTCTATCTTCAAAACAAG+AGG | + | chr1_3:7841863-7841882 | None:intergenic | 30.0% | |
| ! | AGATAAAACAGCATAATGGA+AGG | + | chr1_3:7842054-7842073 | None:intergenic | 30.0% |
| GGAAAGATAAAACAGCATAA+TGG | + | chr1_3:7842058-7842077 | None:intergenic | 30.0% | |
| TACAGAAAAGAAGAGAACTT+TGG | + | chr1_3:7842079-7842098 | None:intergenic | 30.0% | |
| !!! | GTTTAGAAGCAACCATTTTT+TGG | - | chr1_3:7842204-7842223 | Msa0101250:intron | 30.0% |
| AAATAACAAATCTCTCATCG+AGG | - | chr1_3:7842419-7842438 | Msa0101250:intron | 30.0% | |
| ! | AAAATGTAGAAGCATGTGAA+TGG | - | chr1_3:7842619-7842638 | Msa0101250:intron | 30.0% |
| TCTCTCTTTGTTAAATCATC+TGG | - | chr1_3:7842727-7842746 | Msa0101250:intron | 30.0% | |
| TTTGTTAAATCATCTGGCTA+AGG | - | chr1_3:7842733-7842752 | Msa0101250:intron | 30.0% | |
| ! | GATACTCTGGAAAATTTGTA+TGG | - | chr1_3:7842836-7842855 | Msa0101250:intron | 30.0% |
| GAGAAATTACTTTGCTAGTT+TGG | - | chr1_3:7842970-7842989 | Msa0101250:intron | 30.0% | |
| ! | AAATTACTTTGCTAGTTTGG+TGG | - | chr1_3:7842973-7842992 | Msa0101250:intron | 30.0% |
| CATTTGAAGGTTAAATACAG+AGG | - | chr1_3:7843192-7843211 | Msa0101250:intron | 30.0% | |
| CATGTAATAAGGTTACTTCT+CGG | + | chr1_3:7843461-7843480 | None:intergenic | 30.0% | |
| ! | ATCAGATACTGTAGAAGTAT+CGG | + | chr1_3:7843665-7843684 | None:intergenic | 30.0% |
| ! | TTACGATGATGATGATGATT+TGG | - | chr1_3:7843896-7843915 | Msa0101250:intron | 30.0% |
| ! | TACGATGATGATGATGATTT+GGG | - | chr1_3:7843897-7843916 | Msa0101250:intron | 30.0% |
| ! | TGATGATGATTTGGGAATTA+TGG | - | chr1_3:7843905-7843924 | Msa0101250:intron | 30.0% |
| TCAAACACTTCCTCTTTAAT+TGG | - | chr1_3:7844040-7844059 | Msa0101250:intron | 30.0% | |
| CAAACACTTCCTCTTTAATT+GGG | - | chr1_3:7844041-7844060 | Msa0101250:intron | 30.0% | |
| TATGTTTCACCCAATTAAAG+AGG | + | chr1_3:7844053-7844072 | None:intergenic | 30.0% | |
| GAAATGAGATCCAAATAAAG+TGG | + | chr1_3:7844087-7844106 | None:intergenic | 30.0% | |
| AATGCCATAAACATTCAACA+AGG | - | chr1_3:7844229-7844248 | Msa0101250:intron | 30.0% | |
| !!! | CATTCAACAAGGTTTTAGTT+TGG | - | chr1_3:7844240-7844259 | Msa0101250:intron | 30.0% |
| ACTATTGGACTATCATCTAT+TGG | + | chr1_3:7844389-7844408 | None:intergenic | 30.0% | |
| ACTATAACCTAAACCATTAC+AGG | - | chr1_3:7844427-7844446 | Msa0101250:intron | 30.0% | |
| TAAATCTCCTGTAATGGTTT+AGG | + | chr1_3:7844437-7844456 | None:intergenic | 30.0% | |
| AGGAGATTTAGATTAAACAG+AGG | - | chr1_3:7844447-7844466 | Msa0101250:intron | 30.0% | |
| ! | TTCTAGTTGTTGCATAATGT+AGG | - | chr1_3:7844530-7844549 | Msa0101250:intron | 30.0% |
| TTCCTACAAAATGGAAGAAA+TGG | + | chr1_3:7844590-7844609 | None:intergenic | 30.0% | |
| !! | AGCTTTAAATGAATCACTTC+AGG | - | chr1_3:7844629-7844648 | Msa0101250:intron | 30.0% |
| !! | TTTTAAAAGATGAGAGGGTT+TGG | - | chr1_3:7844723-7844742 | Msa0101250:CDS | 30.0% |
| TAAGGAAGAAAAGACACATA+CGG | - | chr1_3:7844917-7844936 | Msa0101250:intron | 30.0% | |
| GAAAATATTTAGAAGCCAAG+TGG | - | chr1_3:7844979-7844998 | Msa0101250:intron | 30.0% | |
| TTTACTCTGCTTTAACTACT+TGG | + | chr1_3:7845032-7845051 | None:intergenic | 30.0% | |
| GATATACAAAATATGGACAG+AGG | - | chr1_3:7845135-7845154 | Msa0101250:intron | 30.0% | |
| ACTAAGAACATAAACTACCA+TGG | - | chr1_3:7845246-7845265 | Msa0101250:intron | 30.0% | |
| ATAAACTACCATGGTAAAGA+GGG | - | chr1_3:7845255-7845274 | Msa0101250:intron | 30.0% | |
| CACTAATTTATCCTGGATTT+GGG | + | chr1_3:7845342-7845361 | None:intergenic | 30.0% | |
| TCACTAATTTATCCTGGATT+TGG | + | chr1_3:7845343-7845362 | None:intergenic | 30.0% | |
| ATCCAGGATAAATTAGTGAA+TGG | - | chr1_3:7845344-7845363 | Msa0101250:intron | 30.0% | |
| ATCCATTCACTAATTTATCC+TGG | + | chr1_3:7845349-7845368 | None:intergenic | 30.0% | |
| AAATTGATACCCATCACTAA+GGG | + | chr1_3:7845394-7845413 | None:intergenic | 30.0% | |
| ! | CAATATTTAAAACTAAGCCC+AGG | - | chr1_3:7845587-7845606 | Msa0101250:intron | 30.0% |
| ATGATATCTTCATAAACTGC+AGG | - | chr1_3:7845677-7845696 | Msa0101250:intron | 30.0% | |
| ATAACAGAACGATATCTTTC+TGG | - | chr1_3:7845830-7845849 | Msa0101250:intron | 30.0% | |
| CTCAATCTTCTAAATGTGTT+TGG | + | chr1_3:7845970-7845989 | None:intergenic | 30.0% | |
| ! | AATATGGATCCATTTTACCT+GGG | + | chr1_3:7846107-7846126 | None:intergenic | 30.0% |
| ! | AAATATGGATCCATTTTACC+TGG | + | chr1_3:7846108-7846127 | None:intergenic | 30.0% |
| TCTCTTATTATTGCAGTGAA+AGG | - | chr1_3:7846253-7846272 | Msa0101250:intron | 30.0% | |
| AATGAATACAAGATGGAGTT+GGG | + | chr1_3:7846280-7846299 | None:intergenic | 30.0% | |
| TAATGAATACAAGATGGAGT+TGG | + | chr1_3:7846281-7846300 | None:intergenic | 30.0% | |
| ACAAAAATCACGTATACTTC+AGG | + | chr1_3:7846386-7846405 | None:intergenic | 30.0% | |
| TAAAATGGCTCCAAAATAGA+TGG | + | chr1_3:7846615-7846634 | None:intergenic | 30.0% | |
| ! | AAATGGTTTCTCCTGATTTT+TGG | - | chr1_3:7846700-7846719 | Msa0101250:intron | 30.0% |
| GAACATTGAATCCAAAAATC+AGG | + | chr1_3:7846714-7846733 | None:intergenic | 30.0% | |
| !! | GATTTTTGGATTCAATGTTC+AGG | - | chr1_3:7846714-7846733 | Msa0101250:intron | 30.0% |
| CTCAATGCAATTAAGATGTA+TGG | + | chr1_3:7846753-7846772 | None:intergenic | 30.0% | |
| CAGTCTACAATCAAATCAAA+TGG | + | chr1_3:7846810-7846829 | None:intergenic | 30.0% | |
| ! | TGCATTTTTGCTAAAGTTGA+TGG | + | chr1_3:7846932-7846951 | None:intergenic | 30.0% |
| ! | AAAAATGCATGTCTGTTTTC+AGG | - | chr1_3:7846943-7846962 | Msa0101250:intron | 30.0% |
| ACAGTAGACATCATAAAAAC+AGG | + | chr1_3:7847353-7847372 | None:intergenic | 30.0% | |
| ! | TTTTATGATGTCTACTGTCT+TGG | - | chr1_3:7847355-7847374 | Msa0101250:CDS | 30.0% |
| !! | CTACTGTCTTGGTATTTTTA+TGG | - | chr1_3:7847366-7847385 | Msa0101250:CDS | 30.0% |
| ! | ATTTTTATCCTCTCCGTTTT+GGG | + | chr1_3:7847410-7847429 | None:intergenic | 30.0% |
| ! | TTTTTATCTGCATTCCAAAC+AGG | - | chr1_3:7847630-7847649 | Msa0101250:intron | 30.0% |
| TGTATTTATTTCCACCTGTT+TGG | + | chr1_3:7847647-7847666 | None:intergenic | 30.0% | |
| !!! | ACTTTTTTTTTTCCTTCCCT+TGG | - | chr1_3:7848128-7848147 | Msa0101250:intron | 30.0% |
| TAATACAAACTAACCTCTTC+AGG | + | chr1_3:7848218-7848237 | None:intergenic | 30.0% | |
| AAATCCAGAACGAAAAGAAA+TGG | - | chr1_3:7848430-7848449 | Msa0101250:intron | 30.0% | |
| ! | TTTTCCATTTCTTTTCGTTC+TGG | + | chr1_3:7848437-7848456 | None:intergenic | 30.0% |
| CGAAAAGAAATGGAAAAACA+AGG | - | chr1_3:7848440-7848459 | Msa0101250:intron | 30.0% | |
| ATGTTAAAAACCAGCTTATC+TGG | - | chr1_3:7848606-7848625 | Msa0101250:intron | 30.0% | |
| TGTTAAAAACCAGCTTATCT+GGG | - | chr1_3:7848607-7848626 | Msa0101250:intron | 30.0% | |
| ATAAGCATGCAACAATACAA+AGG | + | chr1_3:7848662-7848681 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTGCTCTTCCACAT+AGG | - | chr1_3:7848693-7848712 | Msa0101250:intron | 30.0% |
| TTTCTTATACATCGCATTGA+TGG | + | chr1_3:7848728-7848747 | None:intergenic | 30.0% | |
| GCATATTTATCTTAGTGCAA+AGG | + | chr1_3:7848902-7848921 | None:intergenic | 30.0% | |
| AGTTTGACTACCGAATAATA+TGG | - | chr1_3:7849028-7849047 | Msa0101250:intron | 30.0% | |
| ! | ATCTCACATTTTGTATAGTG+AGG | - | chr1_3:7849168-7849187 | Msa0101250:intron | 30.0% |
| ! | AATCCATTTTCACATTGGAA+AGG | + | chr1_3:7849209-7849228 | None:intergenic | 30.0% |
| ! | GTATTTTGTTGGGAAAGAAA+AGG | - | chr1_3:7849240-7849259 | Msa0101250:intron | 30.0% |
| TCTTTCAATCAAGATTACTC+AGG | + | chr1_3:7849286-7849305 | None:intergenic | 30.0% | |
| TTGATTGAAAGATGATGTGA+AGG | - | chr1_3:7849294-7849313 | Msa0101250:intron | 30.0% | |
| TGATTGAAAGATGATGTGAA+GGG | - | chr1_3:7849295-7849314 | Msa0101250:intron | 30.0% | |
| !!! | AGCATCAGCAATTTATTTTG+GGG | + | chr1_3:7849333-7849352 | None:intergenic | 30.0% |
| ! | CAAGCATCAGCAATTTATTT+TGG | + | chr1_3:7849335-7849354 | None:intergenic | 30.0% |
| CTACTGTGTAGATTTGTAAA+AGG | - | chr1_3:7849409-7849428 | Msa0101250:intron | 30.0% | |
| GATAAGATGATCTTCTGCTT+AGG | + | chr1_3:7834976-7834995 | None:intergenic | 35.0% | |
| ATATGTATGAAGCACAGACA+CGG | - | chr1_3:7835203-7835222 | Msa0101250:intron | 35.0% | |
| TTTCTTAGGTGAATCAGCAT+AGG | + | chr1_3:7835393-7835412 | None:intergenic | 35.0% | |
| GTGGAACCAAACATACATTT+AGG | + | chr1_3:7835679-7835698 | None:intergenic | 35.0% | |
| AAATATGGTTTCTCCAAACG+TGG | + | chr1_3:7835698-7835717 | None:intergenic | 35.0% | |
| AAATTCATCCCTGACTTTGT+CGG | - | chr1_3:7835790-7835809 | Msa0101250:intron | 35.0% | |
| TTTAGTCTCTAGCATACTCT+CGG | + | chr1_3:7835897-7835916 | None:intergenic | 35.0% | |
| CACAGTAAGTGGTTAAGTAT+AGG | - | chr1_3:7835986-7836005 | Msa0101250:CDS | 35.0% | |
| TGAAATAGTCGTAATCTCAG+GGG | - | chr1_3:7836046-7836065 | Msa0101250:intron | 35.0% | |
| !! | GTTGGATCTTGAACTGATTT+TGG | - | chr1_3:7836169-7836188 | Msa0101250:CDS | 35.0% |
| !!! | CGAGTTTTGAAGTATTCTAC+GGG | - | chr1_3:7836675-7836694 | Msa0101250:intron | 35.0% |
| ! | CTTGATTTTGTAGTTTCCGT+GGG | - | chr1_3:7836751-7836770 | Msa0101250:CDS | 35.0% |
| AGATCATAAGATGAAACCCA+CGG | + | chr1_3:7836770-7836789 | None:intergenic | 35.0% | |
| !!! | CTTAGCTTGTATAGTTTTGC+AGG | + | chr1_3:7836928-7836947 | None:intergenic | 35.0% |
| CTGCAAAACTATACAAGCTA+AGG | - | chr1_3:7836926-7836945 | Msa0101250:intron | 35.0% | |
| !! | GTTTTAACAAACGATCCTAG+TGG | - | chr1_3:7836967-7836986 | Msa0101250:CDS | 35.0% |
| AGTGTAAATGTACATCCACT+AGG | + | chr1_3:7836985-7837004 | None:intergenic | 35.0% | |
| ! | TAGTGGATGTACATTTACAC+TGG | - | chr1_3:7836984-7837003 | Msa0101250:CDS | 35.0% |
| TACACAATGTTCTCAGTTTC+TGG | - | chr1_3:7837044-7837063 | Msa0101250:intron | 35.0% | |
| AAGAAACGACCATCAAAGTA+GGG | + | chr1_3:7837098-7837117 | None:intergenic | 35.0% | |
| TAAGAAACGACCATCAAAGT+AGG | + | chr1_3:7837099-7837118 | None:intergenic | 35.0% | |
| CAAGAAGCAAATGATTAGGA+AGG | + | chr1_3:7837125-7837144 | None:intergenic | 35.0% | |
| GATGAATGCATATGTCTTGT+AGG | - | chr1_3:7837149-7837168 | Msa0101250:intron | 35.0% | |
| !! | GACCATCTCTAAAGATGTTT+TGG | - | chr1_3:7837370-7837389 | Msa0101250:intron | 35.0% |
| ! | ACCCAAAACATCTTTAGAGA+TGG | + | chr1_3:7837375-7837394 | None:intergenic | 35.0% |
| TCTTTACAATCAAATAGCCG+TGG | - | chr1_3:7837485-7837504 | Msa0101250:CDS | 35.0% | |
| ! | AAGAGAGATAACATGATGGA+AGG | - | chr1_3:7837666-7837685 | Msa0101250:intron | 35.0% |
| TTTGAATGGGAGATAAGAAG+GGG | + | chr1_3:7837829-7837848 | None:intergenic | 35.0% | |
| GTTTGAATGGGAGATAAGAA+GGG | + | chr1_3:7837830-7837849 | None:intergenic | 35.0% | |
| TGTTTGAATGGGAGATAAGA+AGG | + | chr1_3:7837831-7837850 | None:intergenic | 35.0% | |
| ! | CATTTTGAACTTCACATCAG+TGG | - | chr1_3:7837897-7837916 | Msa0101250:intron | 35.0% |
| ! | GACAATTTTTGTGGAATGGA+GGG | + | chr1_3:7837942-7837961 | None:intergenic | 35.0% |
| ! | TGACAATTTTTGTGGAATGG+AGG | + | chr1_3:7837943-7837962 | None:intergenic | 35.0% |
| TCGATATCATAAATGCTCAG+TGG | - | chr1_3:7838062-7838081 | Msa0101250:intron | 35.0% | |
| ! | ATTACTCTGAGTTGAAACAG+GGG | + | chr1_3:7838275-7838294 | None:intergenic | 35.0% |
| ! | CATTACTCTGAGTTGAAACA+GGG | + | chr1_3:7838276-7838295 | None:intergenic | 35.0% |
| ! | ACATTACTCTGAGTTGAAAC+AGG | + | chr1_3:7838277-7838296 | None:intergenic | 35.0% |
| ACTCAGAGTAATGTGAAAGA+TGG | - | chr1_3:7838283-7838302 | Msa0101250:intron | 35.0% | |
| CATGAATATGTGCCCAATAA+GGG | + | chr1_3:7838647-7838666 | None:intergenic | 35.0% | |
| ACATGAATATGTGCCCAATA+AGG | + | chr1_3:7838648-7838667 | None:intergenic | 35.0% | |
| TATTGGGCACATATTCATGT+AGG | - | chr1_3:7838648-7838667 | Msa0101250:CDS | 35.0% | |
| TATTCATGTAGGACACTTAC+AGG | - | chr1_3:7838659-7838678 | Msa0101250:CDS | 35.0% | |
| ATTCATGTAGGACACTTACA+GGG | - | chr1_3:7838660-7838679 | Msa0101250:CDS | 35.0% | |
| GTCCCTACCTTCTATAAAAA+TGG | - | chr1_3:7838927-7838946 | Msa0101250:CDS | 35.0% | |
| !! | CACCCATTTTTATAGAAGGT+AGG | + | chr1_3:7838933-7838952 | None:intergenic | 35.0% |
| CTACCTTCTATAAAAATGGG+TGG | - | chr1_3:7838931-7838950 | Msa0101250:CDS | 35.0% | |
| !! | TGACCACCCATTTTTATAGA+AGG | + | chr1_3:7838937-7838956 | None:intergenic | 35.0% |
| TCCTTTCAATTACCTTAGCT+AGG | - | chr1_3:7839068-7839087 | Msa0101250:intron | 35.0% | |
| ACCTAGCTAAGGTAATTGAA+AGG | + | chr1_3:7839072-7839091 | None:intergenic | 35.0% | |
| ! | TGTCGTAAAGTTTTCTTGTG+GGG | + | chr1_3:7839526-7839545 | None:intergenic | 35.0% |
| ! | GTGTCGTAAAGTTTTCTTGT+GGG | + | chr1_3:7839527-7839546 | None:intergenic | 35.0% |
| ! | AAATTTTCTGGATTCATCCC+TGG | - | chr1_3:7839784-7839803 | Msa0101250:intron | 35.0% |
| ACAGAAAATGCTGAACGTAA+TGG | - | chr1_3:7839846-7839865 | Msa0101250:intron | 35.0% | |
| ! | TAAAGGCTCGCTTTCTAAAA+TGG | + | chr1_3:7840077-7840096 | None:intergenic | 35.0% |
| AAGCGAGCCTTTAATAAATG+AGG | - | chr1_3:7840084-7840103 | Msa0101250:CDS | 35.0% | |
| TTCAAGATGAAAAGAATCCG+TGG | - | chr1_3:7840325-7840344 | Msa0101250:intron | 35.0% | |
| !! | TCTAGCTTTAGTTTGATCCA+CGG | + | chr1_3:7840345-7840364 | None:intergenic | 35.0% |
| GTATAATAGGGTGAACAAAC+AGG | - | chr1_3:7840405-7840424 | Msa0101250:intron | 35.0% | |
| TGGTTTATTGGACGAAATGT+TGG | - | chr1_3:7840564-7840583 | Msa0101250:intron | 35.0% | |
| TTATTGGACGAAATGTTGGA+TGG | - | chr1_3:7840568-7840587 | Msa0101250:intron | 35.0% | |
| GCAAATGCGACAATTATCAT+GGG | + | chr1_3:7840659-7840678 | None:intergenic | 35.0% | |
| TGCAAATGCGACAATTATCA+TGG | + | chr1_3:7840660-7840679 | None:intergenic | 35.0% | |
| ACTAGACAATACAATTGAGG+GGG | + | chr1_3:7840743-7840762 | None:intergenic | 35.0% | |
| GACAAATGGAAGAAAGTGAA+TGG | + | chr1_3:7840863-7840882 | None:intergenic | 35.0% | |
| GTCAAATGTGACAGTTATTG+AGG | - | chr1_3:7840908-7840927 | Msa0101250:CDS | 35.0% | |
| TTGTAGACGATATGGATGAA+TGG | - | chr1_3:7841224-7841243 | Msa0101250:intron | 35.0% | |
| GCACATTCAATGTTAAACTC+CGG | - | chr1_3:7841251-7841270 | Msa0101250:intron | 35.0% | |
| CTTGTATCCTTCTTCAATCA+AGG | - | chr1_3:7841305-7841324 | Msa0101250:intron | 35.0% | |
| AATACAGCCTTGATTGAAGA+AGG | + | chr1_3:7841315-7841334 | None:intergenic | 35.0% | |
| !!! | TCAAGGCTGTATTTTTTCCT+TGG | - | chr1_3:7841322-7841341 | Msa0101250:intron | 35.0% |
| ACAAACACAAAGTTGTACCA+AGG | + | chr1_3:7841342-7841361 | None:intergenic | 35.0% | |
| GGAATAGCTACACATTTGTT+TGG | - | chr1_3:7841378-7841397 | Msa0101250:intron | 35.0% | |
| GTTTCTTTGTTCCTTTGTTC+AGG | - | chr1_3:7841400-7841419 | Msa0101250:CDS | 35.0% | |
| AGCATCAATAGAAATGAGGT+TGG | + | chr1_3:7841481-7841500 | None:intergenic | 35.0% | |
| ! | TCCTGATATTTCTGTTTGCT+TGG | - | chr1_3:7841604-7841623 | Msa0101250:CDS | 35.0% |
| TCCAAGCAAACAGAAATATC+AGG | + | chr1_3:7841608-7841627 | None:intergenic | 35.0% | |
| CTGAAAGAAAGAATCTCTAG+TGG | - | chr1_3:7841667-7841686 | Msa0101250:intron | 35.0% | |
| ! | AAAGAATCTCTAGTGGATCT+TGG | - | chr1_3:7841674-7841693 | Msa0101250:intron | 35.0% |
| ! | AAGAATCTCTAGTGGATCTT+GGG | - | chr1_3:7841675-7841694 | Msa0101250:intron | 35.0% |
| TTATTTGTATGAGGGGTTAG+CGG | - | chr1_3:7841723-7841742 | Msa0101250:CDS | 35.0% | |
| ACATCATCTCTTATCCTCTT+TGG | - | chr1_3:7841889-7841908 | Msa0101250:intron | 35.0% | |
| ! | TAAAACAGCATAATGGAAGG+TGG | + | chr1_3:7842051-7842070 | None:intergenic | 35.0% |
| TGTTATTACGGGTTTCTATC+TGG | + | chr1_3:7842380-7842399 | None:intergenic | 35.0% | |
| CATTTGCAAGCTGTTATTAC+GGG | + | chr1_3:7842391-7842410 | None:intergenic | 35.0% | |
| GCATTTGCAAGCTGTTATTA+CGG | + | chr1_3:7842392-7842411 | None:intergenic | 35.0% | |
| TAACAGCTTGCAAATGCAAT+CGG | - | chr1_3:7842395-7842414 | Msa0101250:intron | 35.0% | |
| GAGGTTCATTTGATGAAGAT+CGG | - | chr1_3:7842589-7842608 | Msa0101250:intron | 35.0% | |
| GCATAAGTGAGGTCAATATT+GGG | + | chr1_3:7842675-7842694 | None:intergenic | 35.0% | |
| ATATAATGTAACTGACCTCC+CGG | + | chr1_3:7843366-7843385 | None:intergenic | 35.0% | |
| ACCTTATTACATGTGAGTTC+TGG | - | chr1_3:7843468-7843487 | Msa0101250:CDS | 35.0% | |
| CCTTATTACATGTGAGTTCT+GGG | - | chr1_3:7843469-7843488 | Msa0101250:CDS | 35.0% | |
| ! | TAGATGCTTTTGTACTAGCA+CGG | + | chr1_3:7843588-7843607 | None:intergenic | 35.0% |
| CATCTAGAAATCCAACTGTT+TGG | - | chr1_3:7843602-7843621 | Msa0101250:intron | 35.0% | |
| ! | CACAATTTTTATCCCACTTC+TGG | - | chr1_3:7843702-7843721 | Msa0101250:intron | 35.0% |
| ! | AATTTTTATCCCACTTCTGG+TGG | - | chr1_3:7843705-7843724 | Msa0101250:intron | 35.0% |
| GATGAGAATGACAGTAAATC+TGG | - | chr1_3:7843933-7843952 | Msa0101250:intron | 35.0% | |
| !!! | GCCTGACTTTTTTCAAATAG+CGG | - | chr1_3:7843963-7843982 | Msa0101250:intron | 35.0% |
| !!! | CTTTTTTCAAATAGCGGCTT+TGG | - | chr1_3:7843969-7843988 | Msa0101250:intron | 35.0% |
| TGAGATCCAAATAAAGTGGT+GGG | + | chr1_3:7844083-7844102 | None:intergenic | 35.0% | |
| ATGAGATCCAAATAAAGTGG+TGG | + | chr1_3:7844084-7844103 | None:intergenic | 35.0% | |
| CATTACATAGAACAGATTGG+AGG | + | chr1_3:7844287-7844306 | None:intergenic | 35.0% | |
| GTGCATTACATAGAACAGAT+TGG | + | chr1_3:7844290-7844309 | None:intergenic | 35.0% | |
| CTGTTCTATGTAATGCACAT+AGG | - | chr1_3:7844292-7844311 | Msa0101250:intron | 35.0% | |
| AATGCACATAGGCATTCTTT+AGG | - | chr1_3:7844303-7844322 | Msa0101250:intron | 35.0% | |
| GATGATAGTCCAATAGTTAG+AGG | - | chr1_3:7844392-7844411 | Msa0101250:intron | 35.0% | |
| CTTCTTCTACCTCTAACTAT+TGG | + | chr1_3:7844404-7844423 | None:intergenic | 35.0% | |
| ACTGTACGTATTGGATCAAA+TGG | + | chr1_3:7844493-7844512 | None:intergenic | 35.0% | |
| ! | AACAACTAGAACCTTTTAGG+TGG | + | chr1_3:7844521-7844540 | None:intergenic | 35.0% |
| ! | TGCAACAACTAGAACCTTTT+AGG | + | chr1_3:7844524-7844543 | None:intergenic | 35.0% |
| ! | GACCATTTCTTCCATTTTGT+AGG | - | chr1_3:7844585-7844604 | Msa0101250:intron | 35.0% |
| TGAATCACTTCAGGATTTAC+TGG | - | chr1_3:7844638-7844657 | Msa0101250:intron | 35.0% | |
| !! | TGTGTGATTTCTTTTTCGTG+TGG | - | chr1_3:7844870-7844889 | Msa0101250:intron | 35.0% |
| !! | GTGTGATTTCTTTTTCGTGT+GGG | - | chr1_3:7844871-7844890 | Msa0101250:intron | 35.0% |
| !! | TGTGATTTCTTTTTCGTGTG+GGG | - | chr1_3:7844872-7844891 | Msa0101250:intron | 35.0% |
| !!! | TTTTGGGATTAAGACTGACA+AGG | + | chr1_3:7845095-7845114 | None:intergenic | 35.0% |
| CATAAACTACCATGGTAAAG+AGG | - | chr1_3:7845254-7845273 | Msa0101250:intron | 35.0% | |
| AATTGATACCCATCACTAAG+GGG | + | chr1_3:7845393-7845412 | None:intergenic | 35.0% | |
| GAAATTGATACCCATCACTA+AGG | + | chr1_3:7845395-7845414 | None:intergenic | 35.0% | |
| TTCATGTATTTGCACACTTC+TGG | - | chr1_3:7845412-7845431 | Msa0101250:intron | 35.0% | |
| TTATGTCGCAACTTTGTAGA+GGG | - | chr1_3:7845435-7845454 | Msa0101250:intron | 35.0% | |
| CAAAAAGACATAGGATAGCA+AGG | - | chr1_3:7845489-7845508 | Msa0101250:intron | 35.0% | |
| !! | CAATAATGTTGGCCTTTGAA+AGG | + | chr1_3:7845613-7845632 | None:intergenic | 35.0% |
| CTTTCAAAGGCCAACATTAT+TGG | - | chr1_3:7845611-7845630 | Msa0101250:intron | 35.0% | |
| !! | CATCCTAATTCTTTGGAGTT+TGG | + | chr1_3:7846148-7846167 | None:intergenic | 35.0% |
| ATGAATACAAGATGGAGTTG+GGG | + | chr1_3:7846279-7846298 | None:intergenic | 35.0% | |
| ! | TTTTGCAAATTGCACTGAGT+TGG | - | chr1_3:7846340-7846359 | Msa0101250:intron | 35.0% |
| ACAGCCATAACAACATGAAA+TGG | - | chr1_3:7846537-7846556 | Msa0101250:intron | 35.0% | |
| AAATTTGTGTTCCTCTGCTT+TGG | - | chr1_3:7846677-7846696 | Msa0101250:intron | 35.0% | |
| ! | GATTTTTATCCTCTCCGTTT+TGG | + | chr1_3:7847411-7847430 | None:intergenic | 35.0% |
| AATCATTGATCTCTCTTCCA+AGG | - | chr1_3:7847427-7847446 | Msa0101250:intron | 35.0% | |
| ATCATTGATCTCTCTTCCAA+GGG | - | chr1_3:7847428-7847447 | Msa0101250:intron | 35.0% | |
| ACAAGAATTGAGAGAATCGA+GGG | + | chr1_3:7847500-7847519 | None:intergenic | 35.0% | |
| TACAAGAATTGAGAGAATCG+AGG | + | chr1_3:7847501-7847520 | None:intergenic | 35.0% | |
| TACATCCTAACAGTTACTGT+GGG | - | chr1_3:7847579-7847598 | Msa0101250:intron | 35.0% | |
| AAACACTTGCCTATTCTGAA+AGG | + | chr1_3:7847810-7847829 | None:intergenic | 35.0% | |
| TGATAAAACTTGGCCAAAGT+GGG | + | chr1_3:7847965-7847984 | None:intergenic | 35.0% | |
| ATGATAAAACTTGGCCAAAG+TGG | + | chr1_3:7847966-7847985 | None:intergenic | 35.0% | |
| !! | TTTGGCCAAGTTTTATCATC+AGG | - | chr1_3:7847967-7847986 | Msa0101250:intron | 35.0% |
| ! | ATCTTTTTCTCAACCAACAC+TGG | - | chr1_3:7848073-7848092 | Msa0101250:CDS | 35.0% |
| ACGTTCAAATTGCTTTCCAA+GGG | + | chr1_3:7848147-7848166 | None:intergenic | 35.0% | |
| AGAGGCTATGAAGGATTAAA+AGG | + | chr1_3:7848247-7848266 | None:intergenic | 35.0% | |
| ! | TTTTAATCCTTCATAGCCTC+TGG | - | chr1_3:7848246-7848265 | Msa0101250:intron | 35.0% |
| GTTAAAAACCAGCTTATCTG+GGG | - | chr1_3:7848608-7848627 | Msa0101250:intron | 35.0% | |
| AAGAACTGTTACCTTCCTTA+TGG | - | chr1_3:7848770-7848789 | Msa0101250:intron | 35.0% | |
| AGAACTGTTACCTTCCTTAT+GGG | - | chr1_3:7848771-7848790 | Msa0101250:intron | 35.0% | |
| ATTGGAAAGGCCTTCAATAT+TGG | + | chr1_3:7849196-7849215 | None:intergenic | 35.0% | |
| ! | TTTTGTTGGGAAAGAAAAGG+AGG | - | chr1_3:7849243-7849262 | Msa0101250:intron | 35.0% |
| ! | TCTTTTACAAGTTGCTTAGG+TGG | - | chr1_3:7849364-7849383 | Msa0101250:intron | 35.0% |
| GTTGGGAAACGCTTAATTAT+AGG | - | chr1_3:7849453-7849472 | Msa0101250:intron | 35.0% | |
| CAGATGTGAATGTCTCATTA+GGG | + | chr1_3:7849656-7849675 | None:intergenic | 35.0% | |
| ACAGATGTGAATGTCTCATT+AGG | + | chr1_3:7849657-7849676 | None:intergenic | 35.0% | |
| ATCGGAGAAACAACAAACTC+CGG | - | chr1_3:7834883-7834902 | Msa0101250:three_prime_UTR | 40.0% | |
| ATCCGTGTTTCCAAAAGTCA+CGG | - | chr1_3:7834997-7835016 | Msa0101250:three_prime_UTR | 40.0% | |
| TTATTACATGTGTCGGACAC+CGG | - | chr1_3:7835283-7835302 | Msa0101250:intron | 40.0% | |
| ! | CTTCTGATCAAAAGCACATC+CGG | + | chr1_3:7835305-7835324 | None:intergenic | 40.0% |
| ! | TGTATGTTTGGTTCCACGTT+TGG | - | chr1_3:7835682-7835701 | Msa0101250:intron | 40.0% |
| GACAAAGTCAGGGATGAATT+TGG | + | chr1_3:7835791-7835810 | None:intergenic | 40.0% | |
| AATTCATCCCTGACTTTGTC+GGG | - | chr1_3:7835791-7835810 | Msa0101250:intron | 40.0% | |
| GATCTGATTGACACAGTAAG+TGG | - | chr1_3:7835975-7835994 | Msa0101250:CDS | 40.0% | |
| TGTCCCTTTGTTAATGCTGT+AGG | + | chr1_3:7836636-7836655 | None:intergenic | 40.0% | |
| !!! | GTTTTGAAGTATTCTACGGG+AGG | - | chr1_3:7836678-7836697 | Msa0101250:intron | 40.0% |
| ! | GCTTGATTTTGTAGTTTCCG+TGG | - | chr1_3:7836750-7836769 | Msa0101250:CDS | 40.0% |
| TCACTAGCTACTCTAAGCAT+TGG | + | chr1_3:7836812-7836831 | None:intergenic | 40.0% | |
| TAACCTTAGAAGCCAAAGTG+TGG | - | chr1_3:7837179-7837198 | Msa0101250:intron | 40.0% | |
| ATATTTCGCATCGTCCATTG+CGG | + | chr1_3:7837210-7837229 | None:intergenic | 40.0% | |
| ! | CGATGCGAAATATTGATGAC+AGG | - | chr1_3:7837217-7837236 | Msa0101250:intron | 40.0% |
| ! | TGATGACAGGTATTGTTGAG+AGG | - | chr1_3:7837230-7837249 | Msa0101250:intron | 40.0% |
| AGATGGTCAAGATGCAAAGA+AGG | + | chr1_3:7837358-7837377 | None:intergenic | 40.0% | |
| ACATCTATACCAACGACCTT+AGG | + | chr1_3:7837404-7837423 | None:intergenic | 40.0% | |
| TGGTATAGATGTTGTGGAGT+TGG | - | chr1_3:7837412-7837431 | Msa0101250:intron | 40.0% | |
| CTTACTATGCATGGAACCTT+TGG | - | chr1_3:7837555-7837574 | Msa0101250:intron | 40.0% | |
| ATAAGACTGTGACACTCCAA+AGG | + | chr1_3:7837574-7837593 | None:intergenic | 40.0% | |
| AGGGAAGAGAGATAACATGA+TGG | - | chr1_3:7837662-7837681 | Msa0101250:intron | 40.0% | |
| ! | AGAGATAACATGATGGAAGG+AGG | - | chr1_3:7837669-7837688 | Msa0101250:intron | 40.0% |
| TTGAATGGGAGATAAGAAGG+GGG | + | chr1_3:7837828-7837847 | None:intergenic | 40.0% | |
| CATCAGTGGTTAAATGCCAT+TGG | - | chr1_3:7837911-7837930 | Msa0101250:intron | 40.0% | |
| TATTGTGTGTATCACTCCGA+AGG | + | chr1_3:7838097-7838116 | None:intergenic | 40.0% | |
| CAGAGTAATGTGAAAGATGG+TGG | - | chr1_3:7838286-7838305 | Msa0101250:intron | 40.0% | |
| CCTGTGTCCCTAGAATTTAA+AGG | + | chr1_3:7838527-7838546 | None:intergenic | 40.0% | |
| ! | CCTTTAAATTCTAGGGACAC+AGG | - | chr1_3:7838524-7838543 | Msa0101250:intron | 40.0% |
| TTCATGTAGGACACTTACAG+GGG | - | chr1_3:7838661-7838680 | Msa0101250:CDS | 40.0% | |
| GGCGGATGATAATTATGACA+GGG | - | chr1_3:7838682-7838701 | Msa0101250:CDS | 40.0% | |
| GCGGATGATAATTATGACAG+GGG | - | chr1_3:7838683-7838702 | Msa0101250:CDS | 40.0% | |
| CGGATGATAATTATGACAGG+GGG | - | chr1_3:7838684-7838703 | Msa0101250:CDS | 40.0% | |
| !! | GTGTTTCCCATTAGTCTTGT+GGG | + | chr1_3:7839260-7839279 | None:intergenic | 40.0% |
| !! | AGTGTTTCCCATTAGTCTTG+TGG | + | chr1_3:7839261-7839280 | None:intergenic | 40.0% |
| AGATATGAGCACGACACAAA+GGG | + | chr1_3:7839465-7839484 | None:intergenic | 40.0% | |
| TAGATATGAGCACGACACAA+AGG | + | chr1_3:7839466-7839485 | None:intergenic | 40.0% | |
| GTCGTGCTCATATCTAAAGA+TGG | - | chr1_3:7839470-7839489 | Msa0101250:intron | 40.0% | |
| TAAAGATGGATCTATGTGCC+AGG | - | chr1_3:7839484-7839503 | Msa0101250:intron | 40.0% | |
| !! | GGTGTCGTAAAGTTTTCTTG+TGG | + | chr1_3:7839528-7839547 | None:intergenic | 40.0% |
| TCTAATGTGCAGGTATGTCA+TGG | - | chr1_3:7839976-7839995 | Msa0101250:intron | 40.0% | |
| CTAATGTGCAGGTATGTCAT+GGG | - | chr1_3:7839977-7839996 | Msa0101250:intron | 40.0% | |
| GACAATTATCATGGGACAGA+GGG | + | chr1_3:7840651-7840670 | None:intergenic | 40.0% | |
| TGACAGTTATTGAGGGACAA+AGG | - | chr1_3:7840916-7840935 | Msa0101250:CDS | 40.0% | |
| GACAGTTATTGAGGGACAAA+GGG | - | chr1_3:7840917-7840936 | Msa0101250:CDS | 40.0% | |
| GACGATATGGATGAATGGTT+AGG | - | chr1_3:7841229-7841248 | Msa0101250:intron | 40.0% | |
| CATGAGAGAGGATATAGCAT+CGG | - | chr1_3:7841276-7841295 | Msa0101250:intron | 40.0% | |
| !! | AGAGGATATAGCATCGGTAA+GGG | - | chr1_3:7841282-7841301 | Msa0101250:intron | 40.0% |
| TTTGTTCCTTTGTTCAGGCA+AGG | - | chr1_3:7841405-7841424 | Msa0101250:CDS | 40.0% | |
| GGGTAGCATCAATAGAAATG+AGG | + | chr1_3:7841485-7841504 | None:intergenic | 40.0% | |
| !! | TTAGCGGAAAAGTATTCAGC+TGG | - | chr1_3:7841739-7841758 | Msa0101250:CDS | 40.0% |
| TATACCAAAATGCCCTGATG+AGG | + | chr1_3:7841929-7841948 | None:intergenic | 40.0% | |
| !! | AGGGCATTTTGGTATAGAGA+GGG | - | chr1_3:7841933-7841952 | Msa0101250:intron | 40.0% |
| TTTGGTATAGAGAGGGATTG+TGG | - | chr1_3:7841940-7841959 | Msa0101250:intron | 40.0% | |
| TTGGTATAGAGAGGGATTGT+GGG | - | chr1_3:7841941-7841960 | Msa0101250:intron | 40.0% | |
| ! | TCTGGTGTGTGAATTAGTCT+TGG | - | chr1_3:7842007-7842026 | Msa0101250:intron | 40.0% |
| !! | CTGGTGTGTGAATTAGTCTT+GGG | - | chr1_3:7842008-7842027 | Msa0101250:intron | 40.0% |
| !! | TGGTGTGTGAATTAGTCTTG+GGG | - | chr1_3:7842009-7842028 | Msa0101250:intron | 40.0% |
| !!! | AAGCAACCATTTTTTGGTGC+TGG | - | chr1_3:7842210-7842229 | Msa0101250:intron | 40.0% |
| !!! | AGCAACCATTTTTTGGTGCT+GGG | - | chr1_3:7842211-7842230 | Msa0101250:intron | 40.0% |
| AGCTTGATAAGCTTCTTGAG+CGG | - | chr1_3:7842442-7842461 | Msa0101250:intron | 40.0% | |
| TTTAGCTGGATGAACTTACC+TGG | - | chr1_3:7842513-7842532 | Msa0101250:intron | 40.0% | |
| ! | TAGTTTGCAACGTGTTTGAC+AGG | - | chr1_3:7842567-7842586 | Msa0101250:intron | 40.0% |
| CGCATAAGTGAGGTCAATAT+TGG | + | chr1_3:7842676-7842695 | None:intergenic | 40.0% | |
| TGTCTGCTTACTCTAAACAG+CGG | - | chr1_3:7843100-7843119 | Msa0101250:intron | 40.0% | |
| ACGTCTTCTTCAGCATTTGA+AGG | - | chr1_3:7843179-7843198 | Msa0101250:intron | 40.0% | |
| CATACGCATGCAGGAATAAT+AGG | + | chr1_3:7843219-7843238 | None:intergenic | 40.0% | |
| ! | TTCCTGCATGCGTATGTTTT+TGG | - | chr1_3:7843223-7843242 | Msa0101250:intron | 40.0% |
| AGCCTTGACAAGAATTGCTT+GGG | - | chr1_3:7843295-7843314 | Msa0101250:intron | 40.0% | |
| ! | CTGCAATAAGCTTTTCTCAG+TGG | + | chr1_3:7843322-7843341 | None:intergenic | 40.0% |
| CCCAGAACTCACATGTAATA+AGG | + | chr1_3:7843472-7843491 | None:intergenic | 40.0% | |
| !! | AATCCAACTGTTTGGCTTGA+AGG | - | chr1_3:7843610-7843629 | Msa0101250:intron | 40.0% |
| GCCGCTATTTGAAAAAAGTC+AGG | + | chr1_3:7843967-7843986 | None:intergenic | 40.0% | |
| TGGATCTCATTTCCAATGTG+TGG | - | chr1_3:7844094-7844113 | Msa0101250:intron | 40.0% | |
| GGATCTCATTTCCAATGTGT+GGG | - | chr1_3:7844095-7844114 | Msa0101250:intron | 40.0% | |
| !! | CACCTATAGAAGCACTGTTA+AGG | - | chr1_3:7844355-7844374 | Msa0101250:intron | 40.0% |
| CTCCTTAACAGTGCTTCTAT+AGG | + | chr1_3:7844360-7844379 | None:intergenic | 40.0% | |
| !! | CTATAGAAGCACTGTTAAGG+AGG | - | chr1_3:7844358-7844377 | Msa0101250:intron | 40.0% |
| ! | TACAGTTGACTCCACCTAAA+AGG | - | chr1_3:7844507-7844526 | Msa0101250:intron | 40.0% |
| TCACTTCAGGATTTACTGGA+CGG | - | chr1_3:7844642-7844661 | Msa0101250:intron | 40.0% | |
| ! | AGATGAGAGGGTTTGGATTT+TGG | - | chr1_3:7844730-7844749 | Msa0101250:CDS | 40.0% |
| !! | GTGATTTCTTTTTCGTGTGG+GGG | - | chr1_3:7844873-7844892 | Msa0101250:intron | 40.0% |
| !! | TGATTTCTTTTTCGTGTGGG+GGG | - | chr1_3:7844874-7844893 | Msa0101250:intron | 40.0% |
| CAGAGTAAATCTCTGACTGT+TGG | - | chr1_3:7845043-7845062 | Msa0101250:intron | 40.0% | |
| AAGACTGACAAGGCTAAAAG+TGG | + | chr1_3:7845085-7845104 | None:intergenic | 40.0% | |
| GAATGACTTCTTGGAACCAA+AGG | + | chr1_3:7845164-7845183 | None:intergenic | 40.0% | |
| !! | TCATAATGGACTGGTTAAGG+GGG | + | chr1_3:7845206-7845225 | None:intergenic | 40.0% |
| !! | CTCATAATGGACTGGTTAAG+GGG | + | chr1_3:7845207-7845226 | None:intergenic | 40.0% |
| !! | GCTCATAATGGACTGGTTAA+GGG | + | chr1_3:7845208-7845227 | None:intergenic | 40.0% |
| !! | TGCTCATAATGGACTGGTTA+AGG | + | chr1_3:7845209-7845228 | None:intergenic | 40.0% |
| AGTTTATGTTCTTAGTCGCC+TGG | + | chr1_3:7845242-7845261 | None:intergenic | 40.0% | |
| GTACACTTGGGTATCATTAC+AGG | + | chr1_3:7845320-7845339 | None:intergenic | 40.0% | |
| GTTATGTCGCAACTTTGTAG+AGG | - | chr1_3:7845434-7845453 | Msa0101250:intron | 40.0% | |
| ! | ACTTTTATGCTGTCGTGGAT+TGG | - | chr1_3:7845765-7845784 | Msa0101250:intron | 40.0% |
| ! | CTTTTATGCTGTCGTGGATT+GGG | - | chr1_3:7845766-7845785 | Msa0101250:intron | 40.0% |
| ! | TGCATTGATATGCAGCGTAA+AGG | + | chr1_3:7845806-7845825 | None:intergenic | 40.0% |
| TTACGCTGCATATCAATGCA+TGG | - | chr1_3:7845806-7845825 | Msa0101250:intron | 40.0% | |
| ! | GGATTTGTACGTCTTTTGCT+TGG | - | chr1_3:7845872-7845891 | Msa0101250:intron | 40.0% |
| TGTAGGATAGAACACCCATT+TGG | + | chr1_3:7846082-7846101 | None:intergenic | 40.0% | |
| TCCTACATTCCCAGGTAAAA+TGG | - | chr1_3:7846095-7846114 | Msa0101250:intron | 40.0% | |
| ! | TCCATTTTACCTGGGAATGT+AGG | + | chr1_3:7846099-7846118 | None:intergenic | 40.0% |
| TCGCCAAACTCCAAAGAATT+AGG | - | chr1_3:7846142-7846161 | Msa0101250:intron | 40.0% | |
| TGACATAGTTGCTGATGTTG+TGG | - | chr1_3:7846508-7846527 | Msa0101250:intron | 40.0% | |
| TTAACACATGACTGCATGCA+AGG | + | chr1_3:7846579-7846598 | None:intergenic | 40.0% | |
| AGAAACCATTTCCAAAGCAG+AGG | + | chr1_3:7846691-7846710 | None:intergenic | 40.0% | |
| TAGAGTAAACAGGAAACCCT+TGG | + | chr1_3:7847447-7847466 | None:intergenic | 40.0% | |
| CTACATCCTAACAGTTACTG+TGG | - | chr1_3:7847578-7847597 | Msa0101250:intron | 40.0% | |
| TTATCTGCATTCCAAACAGG+TGG | - | chr1_3:7847633-7847652 | Msa0101250:intron | 40.0% | |
| TAGCGTAATGTTTGCAACCT+TGG | - | chr1_3:7847724-7847743 | Msa0101250:intron | 40.0% | |
| ACTATGCTGCCTTTCAGAAT+AGG | - | chr1_3:7847798-7847817 | Msa0101250:CDS | 40.0% | |
| CAATAACTGAAACAGCCTCT+TGG | + | chr1_3:7847847-7847866 | None:intergenic | 40.0% | |
| ! | ACTGGCCTGATGATAAAACT+TGG | + | chr1_3:7847975-7847994 | None:intergenic | 40.0% |
| AGGGATATGAATTCCAGTGT+TGG | + | chr1_3:7848089-7848108 | None:intergenic | 40.0% | |
| ACACTGGAATTCATATCCCT+TGG | - | chr1_3:7848089-7848108 | Msa0101250:CDS | 40.0% | |
| CACTGGAATTCATATCCCTT+GGG | - | chr1_3:7848090-7848109 | Msa0101250:CDS | 40.0% | |
| TCAAATTGCTTTCCAAGGGA+AGG | + | chr1_3:7848143-7848162 | None:intergenic | 40.0% | |
| GACGTTCAAATTGCTTTCCA+AGG | + | chr1_3:7848148-7848167 | None:intergenic | 40.0% | |
| TTTCAGATACCTTTCCAGCT+TGG | - | chr1_3:7848558-7848577 | Msa0101250:intron | 40.0% | |
| TTCAGATACCTTTCCAGCTT+GGG | - | chr1_3:7848559-7848578 | Msa0101250:intron | 40.0% | |
| TTGCATTTGTCCCATAAGGA+AGG | + | chr1_3:7848784-7848803 | None:intergenic | 40.0% | |
| TTCCTTATGGGACAAATGCA+AGG | - | chr1_3:7848783-7848802 | Msa0101250:intron | 40.0% | |
| TACCTTGCATTTGTCCCATA+AGG | + | chr1_3:7848788-7848807 | None:intergenic | 40.0% | |
| GGTATCTTAGTTGGCCAATA+AGG | + | chr1_3:7848824-7848843 | None:intergenic | 40.0% | |
| CTTGGAAGACACTTCAGATT+TGG | + | chr1_3:7848874-7848893 | None:intergenic | 40.0% | |
| TAGTGAGGCTCCAATATTGA+AGG | - | chr1_3:7849183-7849202 | Msa0101250:intron | 40.0% | |
| AGGCCTTTCCAATGTGAAAA+TGG | - | chr1_3:7849203-7849222 | Msa0101250:intron | 40.0% | |
| ! | CGAAAGTTTTGCTCAACTTG+TGG | - | chr1_3:7849620-7849639 | Msa0101250:intron | 40.0% |
| AACAACAAACTCCGGCGAAA+TGG | - | chr1_3:7834891-7834910 | Msa0101250:three_prime_UTR | 45.0% | |
| AGTAGATTTCGCCATTTCGC+CGG | + | chr1_3:7834905-7834924 | None:intergenic | 45.0% | |
| !! | TGCCGTGACTTTTGGAAACA+CGG | + | chr1_3:7835002-7835021 | None:intergenic | 45.0% |
| TCCAAAAGTCACGGCATCTT+AGG | - | chr1_3:7835006-7835025 | Msa0101250:three_prime_UTR | 45.0% | |
| ! | TCCTAAGATGCCGTGACTTT+TGG | + | chr1_3:7835010-7835029 | None:intergenic | 45.0% |
| CATGTGACGACTAGAAAGCT+TGG | + | chr1_3:7835040-7835059 | None:intergenic | 45.0% | |
| ! | CAAGCTTTCTAGTCGTCACA+TGG | - | chr1_3:7835038-7835057 | Msa0101250:exon | 45.0% |
| TCGTCACATGGCTAAACCTA+GGG | - | chr1_3:7835050-7835069 | Msa0101250:CDS | 45.0% | |
| !!! | GCGTCTTACAGCTTTTTTCG+TGG | + | chr1_3:7836469-7836488 | None:intergenic | 45.0% |
| ! | TTGGATCTTAAGAGCGTGGT+AGG | + | chr1_3:7836793-7836812 | None:intergenic | 45.0% |
| ! | AGCATTGGATCTTAAGAGCG+TGG | + | chr1_3:7836797-7836816 | None:intergenic | 45.0% |
| GCAACCATTCCCTACTTTGA+TGG | - | chr1_3:7837086-7837105 | Msa0101250:intron | 45.0% | |
| ACGACCATCAAAGTAGGGAA+TGG | + | chr1_3:7837093-7837112 | None:intergenic | 45.0% | |
| CTATACCAACGACCTTAGGA+AGG | + | chr1_3:7837400-7837419 | None:intergenic | 45.0% | |
| GGTCGTTGGTATAGATGTTG+TGG | - | chr1_3:7837406-7837425 | Msa0101250:intron | 45.0% | |
| ! | ATGTTGTGGAGTTGGCTCTT+TGG | - | chr1_3:7837420-7837439 | Msa0101250:intron | 45.0% |
| ! | TGTTGTGGAGTTGGCTCTTT+GGG | - | chr1_3:7837421-7837440 | Msa0101250:intron | 45.0% |
| CAACTCTCTCTCAGTCATAG+CGG | + | chr1_3:7838323-7838342 | None:intergenic | 45.0% | |
| TGAAAAAGACCTTGTCTCCC+AGG | - | chr1_3:7838354-7838373 | Msa0101250:intron | 45.0% | |
| GGGCGGATGATAATTATGAC+AGG | - | chr1_3:7838681-7838700 | Msa0101250:CDS | 45.0% | |
| GACATGCTATCACCTAGCTA+AGG | + | chr1_3:7839083-7839102 | None:intergenic | 45.0% | |
| CGACAATTATCATGGGACAG+AGG | + | chr1_3:7840652-7840671 | None:intergenic | 45.0% | |
| GCTTAATATGCTTTGGCCTG+AGG | - | chr1_3:7840990-7841009 | Msa0101250:intron | 45.0% | |
| TAATATGCTTTGGCCTGAGG+AGG | - | chr1_3:7840993-7841012 | Msa0101250:intron | 45.0% | |
| AATATGCTTTGGCCTGAGGA+GGG | - | chr1_3:7840994-7841013 | Msa0101250:intron | 45.0% | |
| CATACTAAGTTGTGTGTCGC+AGG | - | chr1_3:7841171-7841190 | Msa0101250:CDS | 45.0% | |
| CTATATCCTCTCTCATGTGC+CGG | + | chr1_3:7841273-7841292 | None:intergenic | 45.0% | |
| !! | GAGAGGATATAGCATCGGTA+AGG | - | chr1_3:7841281-7841300 | Msa0101250:intron | 45.0% |
| ! | CCTTTTCCTTGCCTGAACAA+AGG | + | chr1_3:7841414-7841433 | None:intergenic | 45.0% |
| CCTTTGTTCAGGCAAGGAAA+AGG | - | chr1_3:7841411-7841430 | Msa0101250:CDS | 45.0% | |
| CTTGGGTACCCTGCTTAATT+TGG | - | chr1_3:7841692-7841711 | Msa0101250:intron | 45.0% | |
| !! | CAGGGCATTTTGGTATAGAG+AGG | - | chr1_3:7841932-7841951 | Msa0101250:intron | 45.0% |
| AATTCACACACCAGAGAGAG+AGG | + | chr1_3:7842002-7842021 | None:intergenic | 45.0% | |
| !!! | CATTTTTTGGTGCTGGGAGT+GGG | - | chr1_3:7842217-7842236 | Msa0101250:intron | 45.0% |
| !! | CTTCTGAGGTATGCCCTTAT+CGG | - | chr1_3:7842475-7842494 | Msa0101250:intron | 45.0% |
| GTTGCAAACTACACCCACAA+AGG | + | chr1_3:7842558-7842577 | None:intergenic | 45.0% | |
| TTTGCAACGTGTTTGACAGG+AGG | - | chr1_3:7842570-7842589 | Msa0101250:intron | 45.0% | |
| GTCTGCTTACTCTAAACAGC+GGG | - | chr1_3:7843101-7843120 | Msa0101250:intron | 45.0% | |
| TCTGCTTACTCTAAACAGCG+GGG | - | chr1_3:7843102-7843121 | Msa0101250:intron | 45.0% | |
| CTCCAAAAACATACGCATGC+AGG | + | chr1_3:7843228-7843247 | None:intergenic | 45.0% | |
| GAGCCTTGACAAGAATTGCT+TGG | - | chr1_3:7843294-7843313 | Msa0101250:intron | 45.0% | |
| GACCCAAGCAATTCTTGTCA+AGG | + | chr1_3:7843300-7843319 | None:intergenic | 45.0% | |
| ! | CTCTAAACTTGCTTCTTCGC+CGG | - | chr1_3:7843344-7843363 | Msa0101250:intron | 45.0% |
| ! | TCTAAACTTGCTTCTTCGCC+GGG | - | chr1_3:7843345-7843364 | Msa0101250:intron | 45.0% |
| TTACCTCATCCACCAGAAGT+GGG | + | chr1_3:7843717-7843736 | None:intergenic | 45.0% | |
| TTTACCTCATCCACCAGAAG+TGG | + | chr1_3:7843718-7843737 | None:intergenic | 45.0% | |
| GTTGTTAACGGCAACAAAGC+TGG | - | chr1_3:7843873-7843892 | Msa0101250:intron | 45.0% | |
| TCAATGTGGATCCCACACAT+TGG | + | chr1_3:7844109-7844128 | None:intergenic | 45.0% | |
| GCACATAGGCATTCTTTAGG+TGG | - | chr1_3:7844306-7844325 | Msa0101250:intron | 45.0% | |
| GTGGAGTCAACTGTACGTAT+TGG | + | chr1_3:7844502-7844521 | None:intergenic | 45.0% | |
| CTCTGCTTTAACTACTTGGC+TGG | + | chr1_3:7845028-7845047 | None:intergenic | 45.0% | |
| AGGCTAAAAGTGGTAGAGCA+GGG | + | chr1_3:7845075-7845094 | None:intergenic | 45.0% | |
| AAGGCTAAAAGTGGTAGAGC+AGG | + | chr1_3:7845076-7845095 | None:intergenic | 45.0% | |
| !! | ATATGGACAGAGGGTACCTT+TGG | - | chr1_3:7845145-7845164 | Msa0101250:intron | 45.0% |
| GGCTGATGTGAATGACTTCT+TGG | + | chr1_3:7845173-7845192 | None:intergenic | 45.0% | |
| !! | AGTAGCTGCTCATAATGGAC+TGG | + | chr1_3:7845215-7845234 | None:intergenic | 45.0% |
| GTGTCAGTAGCTGCTCATAA+TGG | + | chr1_3:7845220-7845239 | None:intergenic | 45.0% | |
| AACTTCGACCCTCTTTACCA+TGG | + | chr1_3:7845266-7845285 | None:intergenic | 45.0% | |
| TCCTGGATTTGGGTACACTT+GGG | + | chr1_3:7845332-7845351 | None:intergenic | 45.0% | |
| ATCCTGGATTTGGGTACACT+TGG | + | chr1_3:7845333-7845352 | None:intergenic | 45.0% | |
| TCTATCCTTCCCCTTAGTGA+TGG | - | chr1_3:7845381-7845400 | Msa0101250:intron | 45.0% | |
| CTATCCTTCCCCTTAGTGAT+GGG | - | chr1_3:7845382-7845401 | Msa0101250:intron | 45.0% | |
| ! | GGAAGACTTTTATGCTGTCG+TGG | - | chr1_3:7845760-7845779 | Msa0101250:intron | 45.0% |
| GCATAGATATCCGAGACTCT+AGG | + | chr1_3:7845901-7845920 | None:intergenic | 45.0% | |
| CAATATACCGGTCACCTACA+CGG | + | chr1_3:7845931-7845950 | None:intergenic | 45.0% | |
| TGAACGGAATGTTCGCCAAA+TGG | - | chr1_3:7846064-7846083 | Msa0101250:intron | 45.0% | |
| GAACGGAATGTTCGCCAAAT+GGG | - | chr1_3:7846065-7846084 | Msa0101250:intron | 45.0% | |
| GTGTTCTATCCTACATTCCC+AGG | - | chr1_3:7846087-7846106 | Msa0101250:intron | 45.0% | |
| !! | TTCTTTGGAGTTTGGCGAAG+AGG | + | chr1_3:7846140-7846159 | None:intergenic | 45.0% |
| !! | GTGTTCCTCTGCTTTGGAAA+TGG | - | chr1_3:7846683-7846702 | Msa0101250:intron | 45.0% |
| TCGTATGGAGCAGTACATTC+AGG | - | chr1_3:7847224-7847243 | Msa0101250:intron | 45.0% | |
| CGTATGGAGCAGTACATTCA+GGG | - | chr1_3:7847225-7847244 | Msa0101250:intron | 45.0% | |
| AGTACATTCAGGGACAGTCT+AGG | - | chr1_3:7847235-7847254 | Msa0101250:intron | 45.0% | |
| GTACATTCAGGGACAGTCTA+GGG | - | chr1_3:7847236-7847255 | Msa0101250:intron | 45.0% | |
| CAAGCACTTGCTTCCCAAAA+CGG | - | chr1_3:7847394-7847413 | Msa0101250:intron | 45.0% | |
| GAAACAGCCTCTTGGAAGAA+GGG | + | chr1_3:7847839-7847858 | None:intergenic | 45.0% | |
| TGAAACAGCCTCTTGGAAGA+AGG | + | chr1_3:7847840-7847859 | None:intergenic | 45.0% | |
| ! | AGCTTGTTCATAGGCTTCAC+TGG | + | chr1_3:7847993-7848012 | None:intergenic | 45.0% |
| ! | GATAATGAGTTGGGACCCAA+GGG | + | chr1_3:7848108-7848127 | None:intergenic | 45.0% |
| ! | TGATAATGAGTTGGGACCCA+AGG | + | chr1_3:7848109-7848128 | None:intergenic | 45.0% |
| !! | GTCTTTTCCAGTTTGCTCGA+AGG | - | chr1_3:7848165-7848184 | Msa0101250:intron | 45.0% |
| ACTAACCTCTTCAGGTGCAA+CGG | + | chr1_3:7848210-7848229 | None:intergenic | 45.0% | |
| ! | GATGGACTTGTCAACCTATG+TGG | + | chr1_3:7848710-7848729 | None:intergenic | 45.0% |
| CTTAGTGCAAAGGCAACTCT+TGG | + | chr1_3:7848892-7848911 | None:intergenic | 45.0% | |
| !!! | ACATTATAAATATTTTTAAA+AGG | - | chr1_3:7835834-7835853 | Msa0101250:intron | 5.0% |
| !!! | TTTTTATTTTTTTATTTTGT+AGG | - | chr1_3:7837324-7837343 | Msa0101250:intron | 5.0% |
| !!! | AAATAAAATTTTAGTAAATA+TGG | + | chr1_3:7839549-7839568 | None:intergenic | 5.0% |
| GGCGAAATGGCGAAATCTAC+TGG | - | chr1_3:7834904-7834923 | Msa0101250:three_prime_UTR | 50.0% | |
| !! | TTGCTGATTCACAAGCTCGC+CGG | + | chr1_3:7834945-7834964 | None:intergenic | 50.0% |
| GTCGTCACATGGCTAAACCT+AGG | - | chr1_3:7835049-7835068 | Msa0101250:CDS | 50.0% | |
| CTAGAGAGAGCAAGAACCCT+AGG | + | chr1_3:7835069-7835088 | None:intergenic | 50.0% | |
| ! | GAGCCACACTTTGGCTTCTA+AGG | + | chr1_3:7837185-7837204 | None:intergenic | 50.0% |
| ! | GTGGTTGAGTTGTACGTGAG+AGG | - | chr1_3:7837280-7837299 | Msa0101250:intron | 50.0% |
| ! | GTTGAGTTGTACGTGAGAGG+AGG | - | chr1_3:7837283-7837302 | Msa0101250:intron | 50.0% |
| !! | TGTTTTGGGTCGCCTTCCTA+AGG | - | chr1_3:7837385-7837404 | Msa0101250:intron | 50.0% |
| AAGTCCACGACTTCAAGCTG+AGG | - | chr1_3:7837602-7837621 | Msa0101250:intron | 50.0% | |
| AGATCCTCAGCTTGAAGTCG+TGG | + | chr1_3:7837609-7837628 | None:intergenic | 50.0% | |
| AGATAAGAAGGGGGAAGGCA+AGG | + | chr1_3:7837819-7837838 | None:intergenic | 50.0% | |
| ATGGGAGATAAGAAGGGGGA+AGG | + | chr1_3:7837824-7837843 | None:intergenic | 50.0% | |
| !! | GGAATGGAGGGAGTATCCAA+TGG | + | chr1_3:7837930-7837949 | None:intergenic | 50.0% |
| ! | TCAGTCATAGCGGAAGCAAC+AGG | + | chr1_3:7838313-7838332 | None:intergenic | 50.0% |
| ! | AGAGGACATGGAGGCTCTTT+TGG | - | chr1_3:7838384-7838403 | Msa0101250:intron | 50.0% |
| ! | GAGGACATGGAGGCTCTTTT+GGG | - | chr1_3:7838385-7838404 | Msa0101250:intron | 50.0% |
| ATGTAGGACACTTACAGGGG+CGG | - | chr1_3:7838664-7838683 | Msa0101250:CDS | 50.0% | |
| ATTATGACAGGGGGAGCCTT+TGG | - | chr1_3:7838693-7838712 | Msa0101250:CDS | 50.0% | |
| GATCTATGTGCCAGGCAGTA+GGG | - | chr1_3:7839492-7839511 | Msa0101250:intron | 50.0% | |
| ! | AGGAAGTATGGATACGGCCA+GGG | + | chr1_3:7839804-7839823 | None:intergenic | 50.0% |
| ! | TAGGAAGTATGGATACGGCC+AGG | + | chr1_3:7839805-7839824 | None:intergenic | 50.0% |
| TGCAGGTATGTCATGGGTGT+TGG | - | chr1_3:7839983-7840002 | Msa0101250:intron | 50.0% | |
| AAGACTGAAGAGAGAGCTCC+AGG | - | chr1_3:7840027-7840046 | Msa0101250:intron | 50.0% | |
| ! | TGTGTGTCGCAGGTGTTGTA+TGG | - | chr1_3:7841181-7841200 | Msa0101250:intron | 50.0% |
| ! | GTGTGTCGCAGGTGTTGTAT+GGG | - | chr1_3:7841182-7841201 | Msa0101250:intron | 50.0% |
| TAAACTCCGGCACATGAGAG+AGG | - | chr1_3:7841264-7841283 | Msa0101250:intron | 50.0% | |
| CCACAGGACAAACTCCAAAG+AGG | + | chr1_3:7841906-7841925 | None:intergenic | 50.0% | |
| !! | CCTCTTTGGAGTTTGTCCTG+TGG | - | chr1_3:7841903-7841922 | Msa0101250:intron | 50.0% |
| TTTGTCCTGTGGCCTCATCA+GGG | - | chr1_3:7841914-7841933 | Msa0101250:intron | 50.0% | |
| CCACTCCCAGCACCAAAAAA+TGG | + | chr1_3:7842219-7842238 | None:intergenic | 50.0% | |
| !!! | CCATTTTTTGGTGCTGGGAG+TGG | - | chr1_3:7842216-7842235 | Msa0101250:intron | 50.0% |
| ! | CGATAAGGGCATACCTCAGA+AGG | + | chr1_3:7842477-7842496 | None:intergenic | 50.0% |
| CTCTCATGCTCGCATAAGTG+AGG | + | chr1_3:7842686-7842705 | None:intergenic | 50.0% | |
| GATTGCTCGTTGTGCTCTAC+AGG | - | chr1_3:7842880-7842899 | Msa0101250:intron | 50.0% | |
| TCAAGGCTCTGCAAGTGTGT+AGG | + | chr1_3:7843283-7843302 | None:intergenic | 50.0% | |
| GAGTTCGTTGGCAAACTCAC+GGG | + | chr1_3:7843566-7843585 | None:intergenic | 50.0% | |
| GGAGTTCGTTGGCAAACTCA+CGG | + | chr1_3:7843567-7843586 | None:intergenic | 50.0% | |
| TGTACTAGCACGGAGTTCGT+TGG | + | chr1_3:7843578-7843597 | None:intergenic | 50.0% | |
| GAGCCTTCAAGCCAAACAGT+TGG | + | chr1_3:7843616-7843635 | None:intergenic | 50.0% | |
| TGGCTTGAAGGCTCAACTAG+TGG | - | chr1_3:7843622-7843641 | Msa0101250:intron | 50.0% | |
| ! | TATCCCACTTCTGGTGGATG+AGG | - | chr1_3:7843711-7843730 | Msa0101250:intron | 50.0% |
| GTTCCTACACTTGTTCCTCC+AGG | - | chr1_3:7843846-7843865 | Msa0101250:intron | 50.0% | |
| !! | CCTCCAGGAGGTGTTGTTAA+CGG | - | chr1_3:7843861-7843880 | Msa0101250:intron | 50.0% |
| TTGCCGTTAACAACACCTCC+TGG | + | chr1_3:7843867-7843886 | None:intergenic | 50.0% | |
| GCGTGTCCCACCACTTTATT+TGG | - | chr1_3:7844074-7844093 | Msa0101250:intron | 50.0% | |
| !! | TCTTTTTCGTGTGGGGGGTT+TGG | - | chr1_3:7844879-7844898 | Msa0101250:intron | 50.0% |
| CCAAGTGGGAAGCCATTGAA+GGG | - | chr1_3:7844994-7845013 | Msa0101250:intron | 50.0% | |
| CAAGTGGGAAGCCATTGAAG+GGG | - | chr1_3:7844995-7845014 | Msa0101250:intron | 50.0% | |
| CTGGATGTCAACCCCTTCAA+TGG | + | chr1_3:7845009-7845028 | None:intergenic | 50.0% | |
| GGCTAAAAGTGGTAGAGCAG+GGG | + | chr1_3:7845074-7845093 | None:intergenic | 50.0% | |
| GGTTAAGGGGGTTCGATTAG+AGG | + | chr1_3:7845194-7845213 | None:intergenic | 50.0% | |
| TATGAGCAGCTACTGACACC+AGG | - | chr1_3:7845221-7845240 | Msa0101250:intron | 50.0% | |
| ACCCAAGTGTACCCAAATCC+AGG | - | chr1_3:7845328-7845347 | Msa0101250:intron | 50.0% | |
| GATACCCATCACTAAGGGGA+AGG | + | chr1_3:7845389-7845408 | None:intergenic | 50.0% | |
| ACTAAGCCCAGGCCTTTCAA+AGG | - | chr1_3:7845598-7845617 | Msa0101250:intron | 50.0% | |
| !! | TGTTGGCCTTTGAAAGGCCT+GGG | + | chr1_3:7845607-7845626 | None:intergenic | 50.0% |
| !! | ATGTTGGCCTTTGAAAGGCC+TGG | + | chr1_3:7845608-7845627 | None:intergenic | 50.0% |
| TCTATGCAGTTCAGCCGTGT+AGG | - | chr1_3:7845914-7845933 | Msa0101250:intron | 50.0% | |
| TGCGATCCTTGCAACTCGTA+TGG | - | chr1_3:7847209-7847228 | Msa0101250:intron | 50.0% | |
| ACTGCTCCATACGAGTTGCA+AGG | + | chr1_3:7847218-7847237 | None:intergenic | 50.0% | |
| TCAGGGACAGTCTAGGGATT+TGG | - | chr1_3:7847242-7847261 | Msa0101250:intron | 50.0% | |
| ACTTGCTTCCCAAAACGGAG+AGG | - | chr1_3:7847399-7847418 | Msa0101250:intron | 50.0% | |
| GAGTGCCCACAGTAACTGTT+AGG | + | chr1_3:7847587-7847606 | None:intergenic | 50.0% | |
| ! | GGCATAATGTTTGGCTCGAC+AGG | - | chr1_3:7847700-7847719 | Msa0101250:intron | 50.0% |
| TCTCTAGCCCTTCTTCCAAG+AGG | - | chr1_3:7847829-7847848 | Msa0101250:intron | 50.0% | |
| AAGTGGGCACAATGTTGGCA+AGG | + | chr1_3:7847949-7847968 | None:intergenic | 50.0% | |
| TGCCAACATTGTGCCCACTT+TGG | - | chr1_3:7847949-7847968 | Msa0101250:intron | 50.0% | |
| CCTCAATCCTTCGAGCAAAC+TGG | + | chr1_3:7848175-7848194 | None:intergenic | 50.0% | |
| ! | CCAGTTTGCTCGAAGGATTG+AGG | - | chr1_3:7848172-7848191 | Msa0101250:intron | 50.0% |
| TGTGTAGCCAGAGGCTATGA+AGG | + | chr1_3:7848256-7848275 | None:intergenic | 50.0% | |
| GTGAGATACTGTGTAGCCAG+AGG | + | chr1_3:7848265-7848284 | None:intergenic | 50.0% | |
| TTTGACAGCCCAAGCTGGAA+AGG | + | chr1_3:7848570-7848589 | None:intergenic | 50.0% | |
| !! | CCATTTTTGACAGCCCAAGC+TGG | + | chr1_3:7848575-7848594 | None:intergenic | 50.0% |
| CCAGCTTGGGCTGTCAAAAA+TGG | - | chr1_3:7848572-7848591 | Msa0101250:intron | 50.0% | |
| CTGGCGACGATGTTGAACTC+CGG | - | chr1_3:7834923-7834942 | Msa0101250:three_prime_UTR | 55.0% | |
| CGACACTGATACGTCGACAC+CGG | - | chr1_3:7835229-7835248 | Msa0101250:intron | 55.0% | |
| ATTGCGGAGGAGCCACACTT+TGG | + | chr1_3:7837194-7837213 | None:intergenic | 55.0% | |
| AAAGTGTGGCTCCTCCGCAA+TGG | - | chr1_3:7837193-7837212 | Msa0101250:intron | 55.0% | |
| TTTCGCATCGTCCATTGCGG+AGG | + | chr1_3:7837207-7837226 | None:intergenic | 55.0% | |
| ! | GGAGTTGGCTCTTTGGGCTA+AGG | - | chr1_3:7837427-7837446 | Msa0101250:intron | 55.0% |
| GCTCTTTGGGCTAAGGTGCA+TGG | - | chr1_3:7837434-7837453 | Msa0101250:intron | 55.0% | |
| CATGTCCTCTTCCTCTGCCT+GGG | + | chr1_3:7838374-7838393 | None:intergenic | 55.0% | |
| GGATCTATGTGCCAGGCAGT+AGG | - | chr1_3:7839491-7839510 | Msa0101250:intron | 55.0% | |
| GGACAATTGTCCCTACTGCC+TGG | + | chr1_3:7839505-7839524 | None:intergenic | 55.0% | |
| ! | CATTTGCTGCTTCCAGAGCC+TGG | + | chr1_3:7840048-7840067 | None:intergenic | 55.0% |
| GTTTGTCCTGTGGCCTCATC+AGG | - | chr1_3:7841913-7841932 | Msa0101250:intron | 55.0% | |
| AAATGCCCTGATGAGGCCAC+AGG | + | chr1_3:7841922-7841941 | None:intergenic | 55.0% | |
| !! | GTGGCCTCATCAGGGCATTT+TGG | - | chr1_3:7841922-7841941 | Msa0101250:intron | 55.0% |
| TCTGCCAACACCTCTCTCTC+TGG | - | chr1_3:7841989-7842008 | Msa0101250:intron | 55.0% | |
| ! | CACACCAGAGAGAGAGGTGT+TGG | + | chr1_3:7841996-7842015 | None:intergenic | 55.0% |
| TGGTTGACTAGTGCCTTGCG+CGG | - | chr1_3:7842639-7842658 | Msa0101250:intron | 55.0% | |
| AACAGCGGGGACAGTTGAAG+AGG | - | chr1_3:7843115-7843134 | Msa0101250:intron | 55.0% | |
| TACCGCAGGTCAGCATGATC+AGG | + | chr1_3:7843141-7843160 | None:intergenic | 55.0% | |
| ATGTCCTGCACTTGTACCGC+AGG | + | chr1_3:7843155-7843174 | None:intergenic | 55.0% | |
| ! | AAACTTGCTTCTTCGCCGGG+AGG | - | chr1_3:7843348-7843367 | Msa0101250:intron | 55.0% |
| CCTCCTGGAGGAACAAGTGT+AGG | + | chr1_3:7843852-7843871 | None:intergenic | 55.0% | |
| CCTACACTTGTTCCTCCAGG+AGG | - | chr1_3:7843849-7843868 | Msa0101250:intron | 55.0% | |
| CCGTTAACAACACCTCCTGG+AGG | + | chr1_3:7843864-7843883 | None:intergenic | 55.0% | |
| GCCAAGTGGGAAGCCATTGA+AGG | - | chr1_3:7844993-7845012 | Msa0101250:intron | 55.0% | |
| CCCTTCAATGGCTTCCCACT+TGG | + | chr1_3:7844997-7845016 | None:intergenic | 55.0% | |
| GGTCAGAAAGCTGATGCAGC+AGG | - | chr1_3:7845851-7845870 | Msa0101250:intron | 55.0% | |
| TGCTTGGCGACCTAGAGTCT+CGG | - | chr1_3:7845888-7845907 | Msa0101250:intron | 55.0% | |
| AGTTCAGCCGTGTAGGTGAC+CGG | - | chr1_3:7845921-7845940 | Msa0101250:intron | 55.0% | |
| GGCCAAAGTGGGCACAATGT+TGG | + | chr1_3:7847954-7847973 | None:intergenic | 55.0% | |
| ! | GCGCGTGCAAGCTTGTTCAT+AGG | + | chr1_3:7848002-7848021 | None:intergenic | 55.0% |
| GTTCACCGTTGCACCTGAAG+AGG | - | chr1_3:7848202-7848221 | Msa0101250:intron | 55.0% | |
| TCGGCTTACCCCAGATAAGC+TGG | + | chr1_3:7848619-7848638 | None:intergenic | 55.0% | |
| !! | GAGAGCGCCCGACAAAGTCA+GGG | + | chr1_3:7835801-7835820 | None:intergenic | 60.0% |
| !! | TGAGAGCGCCCGACAAAGTC+AGG | + | chr1_3:7835802-7835821 | None:intergenic | 60.0% |
| GGTCGCCTTCCTAAGGTCGT+TGG | - | chr1_3:7837392-7837411 | Msa0101250:intron | 60.0% | |
| AGACCTTGTCTCCCAGGCAG+AGG | - | chr1_3:7838360-7838379 | Msa0101250:intron | 60.0% | |
| CTTCCTCTGCCTGGGAGACA+AGG | + | chr1_3:7838366-7838385 | None:intergenic | 60.0% | |
| TGTCTCCCAGGCAGAGGAAG+AGG | - | chr1_3:7838366-7838385 | Msa0101250:intron | 60.0% | |
| CCATGTCCTCTTCCTCTGCC+TGG | + | chr1_3:7838375-7838394 | None:intergenic | 60.0% | |
| CCAGGCAGAGGAAGAGGACA+TGG | - | chr1_3:7838372-7838391 | Msa0101250:intron | 60.0% | |
| GGCAGAGGAAGAGGACATGG+AGG | - | chr1_3:7838375-7838394 | Msa0101250:intron | 60.0% | |
| GAAGAGAGAGCTCCAGGCTC+TGG | - | chr1_3:7840033-7840052 | Msa0101250:intron | 60.0% | |
| GCGGTTGCGTGTACCTTCTG+AGG | - | chr1_3:7842461-7842480 | Msa0101250:intron | 60.0% | |
| GGCCTGATCATGCTGACCTG+CGG | - | chr1_3:7843136-7843155 | Msa0101250:intron | 60.0% | |
| CTGACCTGCGGTACAAGTGC+AGG | - | chr1_3:7843148-7843167 | Msa0101250:intron | 60.0% | |
| GGGCACTTCAAGACCGCGCA+AGG | + | chr1_3:7842655-7842674 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 7834834 | 7849919 | 7834834 | ID=Msa0101250;Name=Msa0101250 |
| chr1_3 | mRNA | 7834834 | 7849919 | 7834834 | ID=Msa0101250-mRNA-1;Parent=Msa0101250;Name=Msa0101250-mRNA-1;_AED=0.11;_eAED=0.11;_QI=76|0.91|0.92|1|0.91|0.92|25|209|882 |
| chr1_3 | exon | 7834834 | 7835153 | 7834834 | ID=Msa0101250-mRNA-1:exon:3113;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7835949 | 7836038 | 7835949 | ID=Msa0101250-mRNA-1:exon:3112;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7836124 | 7836189 | 7836124 | ID=Msa0101250-mRNA-1:exon:3111;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7836530 | 7836598 | 7836530 | ID=Msa0101250-mRNA-1:exon:3110;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7836708 | 7836816 | 7836708 | ID=Msa0101250-mRNA-1:exon:3109;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7836928 | 7837031 | 7836928 | ID=Msa0101250-mRNA-1:exon:3108;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7837466 | 7837547 | 7837466 | ID=Msa0101250-mRNA-1:exon:3107;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7838645 | 7838724 | 7838645 | ID=Msa0101250-mRNA-1:exon:3106;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7838822 | 7838992 | 7838822 | ID=Msa0101250-mRNA-1:exon:3105;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7840082 | 7840146 | 7840082 | ID=Msa0101250-mRNA-1:exon:3104;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7840808 | 7840940 | 7840808 | ID=Msa0101250-mRNA-1:exon:3103;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7841021 | 7841191 | 7841021 | ID=Msa0101250-mRNA-1:exon:3102;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7841384 | 7841458 | 7841384 | ID=Msa0101250-mRNA-1:exon:3101;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7841553 | 7841633 | 7841553 | ID=Msa0101250-mRNA-1:exon:3100;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7841723 | 7841851 | 7841723 | ID=Msa0101250-mRNA-1:exon:3099;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7842046 | 7842183 | 7842046 | ID=Msa0101250-mRNA-1:exon:3098;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7842271 | 7842372 | 7842271 | ID=Msa0101250-mRNA-1:exon:3097;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7843456 | 7843560 | 7843456 | ID=Msa0101250-mRNA-1:exon:3096;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7844648 | 7844765 | 7844648 | ID=Msa0101250-mRNA-1:exon:3095;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7846343 | 7846491 | 7846343 | ID=Msa0101250-mRNA-1:exon:3094;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7847305 | 7847407 | 7847305 | ID=Msa0101250-mRNA-1:exon:3093;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7847515 | 7847582 | 7847515 | ID=Msa0101250-mRNA-1:exon:3092;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7847748 | 7847828 | 7847748 | ID=Msa0101250-mRNA-1:exon:3091;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7848043 | 7848113 | 7848043 | ID=Msa0101250-mRNA-1:exon:3090;Parent=Msa0101250-mRNA-1 |
| chr1_3 | exon | 7849666 | 7849919 | 7849666 | ID=Msa0101250-mRNA-1:exon:3089;Parent=Msa0101250-mRNA-1 |
| chr1_3 | five_prime_UTR | 7849844 | 7849919 | 7849844 | ID=Msa0101250-mRNA-1:five_prime_utr;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7849666 | 7849843 | 7849666 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7848043 | 7848113 | 7848043 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7847748 | 7847828 | 7847748 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7847515 | 7847582 | 7847515 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7847305 | 7847407 | 7847305 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7846343 | 7846491 | 7846343 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7844648 | 7844765 | 7844648 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7843456 | 7843560 | 7843456 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7842271 | 7842372 | 7842271 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7842046 | 7842183 | 7842046 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7841723 | 7841851 | 7841723 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7841553 | 7841633 | 7841553 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7841384 | 7841458 | 7841384 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7841021 | 7841191 | 7841021 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7840808 | 7840940 | 7840808 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7840082 | 7840146 | 7840082 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7838822 | 7838992 | 7838822 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7838645 | 7838724 | 7838645 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7837466 | 7837547 | 7837466 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7836928 | 7837031 | 7836928 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7836708 | 7836816 | 7836708 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7836530 | 7836598 | 7836530 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7836124 | 7836189 | 7836124 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7835949 | 7836038 | 7835949 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | CDS | 7835043 | 7835153 | 7835043 | ID=Msa0101250-mRNA-1:cds;Parent=Msa0101250-mRNA-1 |
| chr1_3 | three_prime_UTR | 7834834 | 7835042 | 7834834 | ID=Msa0101250-mRNA-1:three_prime_utr;Parent=Msa0101250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
