AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1282440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1282440 MtrunA17_Chr8g0353501 96.567 466 6 1 1 456 1 466 0.0 919
Msa1282440 MtrunA17_Chr7g0256211 65.672 469 131 10 1 456 1 452 0.0 562
Msa1282440 MtrunA17_Chr5g0422771 66.782 289 84 3 179 456 177 464 4.12e-134 394
Msa1282440 MtrunA17_Chr1g0210151 59.654 347 108 5 135 456 1 340 7.01e-133 387
Msa1282440 MtrunA17_Chr1g0174701 60.261 307 99 3 168 455 203 505 5.25e-129 383
Msa1282440 MtrunA17_Chr7g0258321 56.598 341 124 5 134 455 127 462 7.35e-128 378
Msa1282440 MtrunA17_Chr2g0321431 63.194 288 86 4 179 456 192 469 1.30e-122 366
Msa1282440 MtrunA17_Chr3g0124601 56.442 326 116 3 150 456 43 361 5.56e-118 349
Msa1282440 MtrunA17_Chr4g0026401 59.155 284 101 2 179 456 187 461 4.70e-113 341
Msa1282440 MtrunA17_Chr3g0115371 50.987 304 126 5 169 456 53 349 2.36e-94 289
Msa1282440 MtrunA17_Chr8g0382861 51.525 295 121 3 176 456 70 356 1.42e-93 287
Msa1282440 MtrunA17_Chr5g0424861 52.778 288 114 4 181 453 67 347 2.04e-90 279
Msa1282440 MtrunA17_Chr3g0093451 56.684 187 58 3 160 323 23 209 1.42e-69 220
Msa1282440 MtrunA17_Chr5g0424851 49.099 222 105 3 233 453 8 222 1.17e-60 204
Msa1282440 MtrunA17_Chr5g0424851 45.370 216 111 2 229 444 218 426 1.14e-55 191
Msa1282440 MtrunA17_Chr1g0196951 33.333 207 108 5 248 449 59 240 2.24e-23 98.6
Msa1282440 MtrunA17_Chr8g0384821 27.848 237 143 4 236 444 12 248 1.71e-16 79.3
Msa1282440 MtrunA17_Chr7g0242651 24.171 211 157 2 239 446 9 219 1.31e-12 67.4
Msa1282440 MtrunA17_Chr2g0315631 22.581 217 127 3 239 435 4 199 3.44e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1282440 AT3G12250.6 78.313 332 60 3 135 456 1 330 6.84e-180 506
Msa1282440 AT3G12250.2 78.313 332 60 3 135 456 1 330 6.84e-180 506
Msa1282440 AT3G12250.7 78.313 332 60 3 135 456 1 330 6.84e-180 506
Msa1282440 AT3G12250.1 78.313 332 60 3 135 456 1 330 6.84e-180 506
Msa1282440 AT3G12250.4 73.109 357 59 4 135 456 1 355 1.59e-174 493
Msa1282440 AT3G12250.5 80.263 304 49 2 163 456 1 303 1.19e-169 479
Msa1282440 AT5G06950.2 73.761 343 56 4 135 456 1 330 2.88e-169 479
Msa1282440 AT5G06950.4 73.761 343 56 4 135 456 1 330 2.88e-169 479
Msa1282440 AT5G06950.1 73.761 343 56 4 135 456 1 330 2.88e-169 479
Msa1282440 AT5G06950.5 73.761 343 56 4 135 456 1 330 2.88e-169 479
Msa1282440 AT5G06950.3 73.761 343 56 4 135 456 1 330 2.88e-169 479
Msa1282440 AT3G12250.3 80.263 304 49 2 163 456 22 324 6.55e-169 478
Msa1282440 AT5G06960.2 75.904 332 68 3 135 456 1 330 1.94e-165 469
Msa1282440 AT5G06960.1 75.904 332 68 3 135 456 1 330 1.94e-165 469
Msa1282440 AT5G06960.3 78.472 288 51 2 179 456 24 310 2.13e-154 440
Msa1282440 AT1G68640.1 68.750 336 90 4 134 456 119 452 2.78e-140 410
Msa1282440 AT1G08320.2 64.808 287 83 2 179 456 52 329 4.17e-130 380
Msa1282440 AT1G08320.5 64.808 287 83 2 179 456 52 329 4.17e-130 380
Msa1282440 AT1G08320.1 64.808 287 83 2 179 456 176 453 1.22e-128 381
Msa1282440 AT1G08320.4 64.808 287 83 2 179 456 176 453 1.22e-128 381
Msa1282440 AT1G08320.3 64.808 287 83 2 179 456 176 453 1.22e-128 381
Msa1282440 AT5G06839.2 60.703 313 99 3 167 455 103 415 3.26e-127 375
Msa1282440 AT5G06839.1 60.577 312 100 3 167 455 103 414 1.76e-126 374
Msa1282440 AT5G06839.3 60.577 312 100 3 167 455 146 457 2.34e-126 375
Msa1282440 AT1G22070.1 53.731 335 131 3 136 456 58 382 4.35e-113 338
Msa1282440 AT5G10030.5 57.576 297 105 2 174 456 73 362 1.50e-112 336
Msa1282440 AT5G10030.3 57.576 297 105 2 174 456 73 362 1.50e-112 336
Msa1282440 AT5G10030.1 57.576 297 105 2 174 456 73 362 1.50e-112 336
Msa1282440 AT5G10030.4 57.576 297 105 2 174 456 73 362 1.50e-112 336
Msa1282440 AT5G10030.2 57.576 297 105 2 174 456 73 362 1.50e-112 336
Msa1282440 AT1G77920.1 54.328 335 132 5 137 456 38 366 4.88e-112 335
Msa1282440 AT5G65210.5 49.860 357 143 6 128 456 18 366 2.31e-107 323
Msa1282440 AT5G65210.7 49.860 357 143 6 128 456 18 366 2.31e-107 323
Msa1282440 AT5G65210.3 49.860 357 143 6 128 456 18 366 2.31e-107 323
Msa1282440 AT5G65210.1 49.860 357 143 6 128 456 18 366 2.31e-107 323
Msa1282440 AT5G65210.2 49.860 357 143 6 128 456 18 366 2.31e-107 323
Msa1282440 AT5G65210.4 49.860 357 143 6 128 456 18 366 2.31e-107 323
Msa1282440 AT5G65210.6 55.219 297 112 2 174 456 7 296 5.31e-107 319
Msa1282440 AT1G58330.1 24.887 221 158 4 233 446 4 223 4.27e-12 66.2
Msa1282440 AT3G14880.2 22.791 215 124 3 246 435 17 214 4.46e-12 66.2
Msa1282440 AT3G14880.1 24.390 205 140 3 246 435 17 221 3.35e-11 63.9

Find 150 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGTATGAACACTTAATA+TGG 0.220209 8_3:-22897240 None:intergenic
CTGCTGAAAGGTGTTTCTTA+TGG 0.270813 8_3:+22899812 Msa1282440:CDS
AACGACTACTTTCCAATTGT+TGG 0.295766 8_3:-22898799 None:intergenic
TTGCTCTTAACAAGTGTTCT+TGG 0.297430 8_3:+22901628 Msa1282440:three_prime_UTR
CGGCCATGGCAAATTCTTCC+TGG 0.301627 8_3:-22897265 None:intergenic
CAATGCATCTTCTGCTTGTT+GGG 0.319617 8_3:-22900960 None:intergenic
ACTACAATCATTTAATCTCT+TGG 0.339226 8_3:-22901538 None:intergenic
GGCTCTGCTTGGTTCGTCAA+TGG 0.351770 8_3:-22897167 None:intergenic
AATCAATCCCTTGCTGTTGC+GGG 0.351965 8_3:+22897794 Msa1282440:CDS
TAGTCAACCATATCGCTTAG+AGG 0.358339 8_3:+22896313 Msa1282440:CDS
GCATTTGTTGTAGTGTTTGC+TGG 0.361748 8_3:-22901417 None:intergenic
ACCTTCCTCATCTGGTTCCT+CGG 0.368179 8_3:+22901039 Msa1282440:CDS
GCTGAAGCTCTTGCTCTAGT+TGG 0.368756 8_3:-22898832 None:intergenic
TTGTACTTGTAGTCTTTGTA+AGG 0.376294 8_3:+22901653 Msa1282440:three_prime_UTR
ACAGCTTCTGGTAAATCAAT+TGG 0.378865 8_3:+22900886 Msa1282440:intron
TCAAGAGAACTGGTGTGAAC+AGG 0.383523 8_3:-22897005 None:intergenic
CCTTCCTCATCTGGTTCCTC+GGG 0.387610 8_3:+22901040 Msa1282440:CDS
TCCTTACTTTCTTTCTCAAT+CGG 0.389088 8_3:-22898002 None:intergenic
ACTGGTGCACCTTCCTCATC+TGG 0.390580 8_3:+22901031 Msa1282440:CDS
TATCATGACCAAAGTATTGA+TGG 0.401161 8_3:-22901601 None:intergenic
CAGGGCCAGGAGAAATTGTT+TGG 0.403898 8_3:-22896986 None:intergenic
GCTCTGCTTGGTTCGTCAAT+GGG 0.405147 8_3:-22897166 None:intergenic
ATAGGCCTATGTCCAACAAT+TGG 0.407086 8_3:+22898787 Msa1282440:intron
ACAATGCATCTTCTGCTTGT+TGG 0.407137 8_3:-22900961 None:intergenic
GCATAGTCTAGGAATGGAAT+TGG 0.407948 8_3:+22901701 Msa1282440:three_prime_UTR
AGCAAGAGCTTCAGCGAGCC+AGG 0.410136 8_3:+22898840 Msa1282440:CDS
AGAAAGGAGAGAGACTTGTA+TGG 0.410514 8_3:-22894140 None:intergenic
TCCACATGCCAGACAACAAA+TGG 0.411800 8_3:-22899783 None:intergenic
ATTGTCGTGTTGTCAATATT+CGG 0.418451 8_3:-22901441 None:intergenic
CGCTCTCAGCTCTCTCTGGT+TGG 0.422468 8_3:+22901510 Msa1282440:CDS
AGCAGAAGATGCATTGTCTC+AGG 0.422669 8_3:+22900967 Msa1282440:CDS
TCTCACTGAGCAGCAGTTGA+TGG 0.427305 8_3:+22900913 Msa1282440:CDS
TCACACCAGTTCTCTTGATA+AGG 0.429903 8_3:+22897010 Msa1282440:CDS
ACAGCATCCTCTAAGCGATA+TGG 0.434154 8_3:-22896320 None:intergenic
AATATTGACAACACGACAAT+CGG 0.436484 8_3:+22901444 Msa1282440:CDS
GCTTCAGCGAGCCAGGCAAC+AGG 0.437362 8_3:+22898847 Msa1282440:CDS
TGCGCGCTCTCAGCTCTCTC+TGG 0.437796 8_3:+22901506 Msa1282440:CDS
AGAAAGAGAGAAAGAGAGAA+AGG 0.437965 8_3:-22894156 None:intergenic
TTTAACTCACTTAAAGTAAG+TGG 0.445667 8_3:+22896963 Msa1282440:CDS
TGAATTTATGAATTAAGTAA+AGG 0.451962 8_3:-22894207 None:intergenic
CTGAAGCTCTTGCTCTAGTT+GGG 0.454588 8_3:-22898831 None:intergenic
ACAAGAAGACATCTAGAGAT+TGG 0.455189 8_3:+22894111 Msa1282440:five_prime_UTR
GAACTTCGCATGATTGTTGA+TGG 0.456225 8_3:+22899697 Msa1282440:CDS
ACTCACCTTATCAAGAGAAC+TGG 0.460871 8_3:-22897015 None:intergenic
TTTATCCTTTGATCTGTCAC+TGG 0.461119 8_3:-22897825 None:intergenic
TAATTGTCATGGAATGGCTT+TGG 0.463319 8_3:+22901773 Msa1282440:three_prime_UTR
ATGAATTAAGTAAAGGAATG+AGG 0.466028 8_3:-22894200 None:intergenic
GGCAAATTACATGGGTCAAA+TGG 0.469208 8_3:+22901069 Msa1282440:CDS
ATCAACAATCATGCGAAGTT+CGG 0.473485 8_3:-22899695 None:intergenic
GATGAGAAGGGAGCAGAAAG+AGG 0.473605 8_3:+22895080 Msa1282440:CDS
GGGGAATGTGGCAAATTACA+TGG 0.473681 8_3:+22901060 Msa1282440:CDS
GAAAGGTGTTTCTTATGGCT+TGG 0.475014 8_3:+22899817 Msa1282440:CDS
GGGTCAAATGGCTATGGCCA+TGG 0.476020 8_3:+22901081 Msa1282440:CDS
AGTTGGTGTTGAAGATGAGA+AGG 0.478818 8_3:+22895067 Msa1282440:CDS
ATCAATCACCATCAATACTT+TGG 0.479625 8_3:+22901593 Msa1282440:three_prime_UTR
AAATCAATCCCTTGCTGTTG+CGG 0.481055 8_3:+22897793 Msa1282440:CDS
GAACTGGTGTGAACAGGGCC+AGG 0.486580 8_3:-22896999 None:intergenic
GCAACCTATGTGGCTCTGCT+TGG 0.486642 8_3:-22897178 None:intergenic
GTACTTTGGGTTATATTTAG+CGG 0.487382 8_3:+22901810 Msa1282440:three_prime_UTR
GCTATGGCCATGGGTAAACT+TGG 0.487827 8_3:+22901091 Msa1282440:CDS
GCTGAAAGGTGTTGCAGCTA+AGG 0.488277 8_3:+22899750 Msa1282440:CDS
TGCAGAATATGCAAGGTGGC+TGG 0.488727 8_3:+22899612 Msa1282440:CDS
AGATGCATTGTCTCAGGGTA+TGG 0.491210 8_3:+22900973 Msa1282440:CDS
CCATGGCCGATGCCAGTCCT+AGG 0.497921 8_3:+22897279 Msa1282440:CDS
TCGGTCATCTGAACTTCTCA+AGG 0.499364 8_3:+22899846 Msa1282440:CDS
ATGAGAAGGGAGCAGAAAGA+GGG 0.507949 8_3:+22895081 Msa1282440:CDS
ATTGTCCATTGTAATTGTCA+TGG 0.508909 8_3:+22901762 Msa1282440:three_prime_UTR
CACCCGCTGATTCTTGTCAT+CGG 0.514566 8_3:-22897327 None:intergenic
TCTGTCGAAATATCAGTCCT+AGG 0.517561 8_3:-22897296 None:intergenic
ATCTGGTTCCTCGGGGAATG+TGG 0.518894 8_3:+22901048 Msa1282440:CDS
GCTTCAATTCCGACGATGCA+TGG 0.521925 8_3:+22895111 Msa1282440:CDS
CCATTGTAATTGTCATGGAA+TGG 0.528907 8_3:+22901767 Msa1282440:three_prime_UTR
GGGAGTCTTCATATCAAGCT+CGG 0.529762 8_3:+22899009 Msa1282440:intron
CCTAGGACTGGCATCGGCCA+TGG 0.532193 8_3:-22897279 None:intergenic
CTTGCAGAGACGTTGTCCAC+TGG 0.532862 8_3:+22901013 Msa1282440:CDS
CAAGTCCATTGGAAGGAAAG+TGG 0.532977 8_3:+22894077 None:intergenic
CTCACTGAGCAGCAGTTGAT+GGG 0.536958 8_3:+22900914 Msa1282440:CDS
AGGACTGATATTTCGACAGA+TGG 0.538631 8_3:+22897299 Msa1282440:CDS
TTTGTTAATTGCAACCTATG+TGG 0.539225 8_3:-22897188 None:intergenic
TCCATTTGTTGTCTGGCATG+TGG 0.541899 8_3:+22899782 Msa1282440:CDS
GTGATGGTGGGAGTGTTGCA+TGG 0.541903 8_3:+22895031 Msa1282440:exon
GAACACTCGAGGGCTTCATT+CGG 0.542555 8_3:+22901113 Msa1282440:CDS
TCCTAGAGTTCGCATAGTCT+AGG 0.547188 8_3:+22901690 Msa1282440:three_prime_UTR
ACTTTCCAATTGTTGGACAT+AGG 0.549896 8_3:-22898792 None:intergenic
TGATGGTGGGAGTGTTGCAT+GGG 0.549942 8_3:+22895032 Msa1282440:exon
AAAGGATAAATCAGATCAGA+AGG 0.550838 8_3:+22897838 Msa1282440:CDS
TGCATCTTCTGCTTGTTGGG+AGG 0.551942 8_3:-22900957 None:intergenic
GGTCAAATGGCTATGGCCAT+GGG 0.552555 8_3:+22901082 Msa1282440:CDS
ATCAGTCCTAGGACTGGCAT+CGG 0.552732 8_3:-22897285 None:intergenic
TTGAACTTATACTGAGAGGC+GGG 0.555275 8_3:-22901842 None:intergenic
GGAGTCTTCATATCAAGCTC+GGG 0.556167 8_3:+22899010 Msa1282440:CDS
CGAAATATCAGTCCTAGGAC+TGG 0.557940 8_3:-22897291 None:intergenic
AGGTGTTTCTTATGGCTTGG+TGG 0.558392 8_3:+22899820 Msa1282440:CDS
CATAAGAAACACCTTTCAGC+AGG 0.562302 8_3:-22899811 None:intergenic
AAGCTTCAATCATCAAATCC+AGG 0.562366 8_3:+22897209 Msa1282440:CDS
CGAACCAAGCAGAGCCACAT+AGG 0.562908 8_3:+22897174 Msa1282440:CDS
GTCAGAACCCGCAACAGCAA+GGG 0.563883 8_3:-22897801 None:intergenic
TTACATGGGTCAAATGGCTA+TGG 0.565231 8_3:+22901075 Msa1282440:CDS
CACGATTCTGAGCGAGCCTG+CGG 0.566544 8_3:-22897963 None:intergenic
ACTGAATCTAACCTGTTGCC+TGG 0.566777 8_3:-22898858 None:intergenic
ACTCGAGGGCTTCATTCGGC+AGG 0.567994 8_3:+22901117 Msa1282440:CDS
AGTGGCCAAACAATTTCTCC+TGG 0.570700 8_3:+22896981 Msa1282440:CDS
TCCTAGACTATGCGAACTCT+AGG 0.570967 8_3:-22901691 None:intergenic
CAAGAGAACTGGTGTGAACA+GGG 0.573772 8_3:-22897004 None:intergenic
ATGGATTTCAGCTATACAGA+TGG 0.574550 8_3:+22896248 Msa1282440:intron
TTGGGAGGATTGTTGCAAGT+TGG 0.576668 8_3:-22900942 None:intergenic
GAGTTCGCATAGTCTAGGAA+TGG 0.583797 8_3:+22901695 Msa1282440:three_prime_UTR
CAGTGGACAACGTCTCTGCA+AGG 0.586648 8_3:-22901012 None:intergenic
ATCAACTGCTGCTCAGTGAG+AGG 0.591227 8_3:-22900911 None:intergenic
AAAAGTAATCATGGATGGCA+AGG 0.591430 8_3:-22901477 None:intergenic
GCAGCCGTGAAAAGTAATCA+TGG 0.591691 8_3:-22901486 None:intergenic
GAGGATGCTGTTGTTCTGAG+TGG 0.593981 8_3:+22896332 Msa1282440:CDS
GGAATATGATGATGTGATGG+TGG 0.594577 8_3:+22895018 Msa1282440:five_prime_UTR
TATTATTGTAGACTCTCCGC+AGG 0.596692 8_3:+22897947 Msa1282440:intron
CAATCATCAAATCCAGGTAG+CGG 0.596748 8_3:+22897215 Msa1282440:CDS
CCGTGAAAAGTAATCATGGA+TGG 0.597749 8_3:-22901482 None:intergenic
CACCGATGACAAGAATCAGC+GGG 0.600003 8_3:+22897325 Msa1282440:CDS
GAGTGTTCCAAGTTTACCCA+TGG 0.600742 8_3:-22901098 None:intergenic
TGACTCCAGTGACAGATCAA+AGG 0.603790 8_3:+22897820 Msa1282440:CDS
AGTGGACAACGTCTCTGCAA+GGG 0.605477 8_3:-22901011 None:intergenic
AAGTGTTCATACAGAAAACC+AGG 0.608836 8_3:+22897247 Msa1282440:CDS
ATTCCCCGAGGAACCAGATG+AGG 0.609365 8_3:-22901044 None:intergenic
GCAGAAGATGCATTGTCTCA+GGG 0.610171 8_3:+22900968 Msa1282440:CDS
CATGATTGTTGATGGTGTAG+TGG 0.611316 8_3:+22899705 Msa1282440:CDS
TGGATTTCAGCTATACAGAT+GGG 0.613061 8_3:+22896249 Msa1282440:intron
AGTCAGAACCCGCAACAGCA+AGG 0.613696 8_3:-22897802 None:intergenic
AGATGAGGAAGGTGCACCAG+TGG 0.616659 8_3:-22901029 None:intergenic
GTTGGTGTTGAAGATGAGAA+GGG 0.617547 8_3:+22895068 Msa1282440:CDS
TTGATTGAACTTATACTGAG+AGG 0.618892 8_3:-22901846 None:intergenic
CCATTCCATGACAATTACAA+TGG 0.621913 8_3:-22901767 None:intergenic
AGAAATATACCATGCATCGT+CGG 0.626352 8_3:-22895120 None:intergenic
GGTAAACTTGGAACACTCGA+GGG 0.626928 8_3:+22901103 Msa1282440:CDS
GCATCGTCGGAATTGAAGCT+CGG 0.633427 8_3:-22895107 None:intergenic
TGTGGAAAACACCTGCTGAA+AGG 0.636597 8_3:+22899800 Msa1282440:CDS
ATTGAACTTATACTGAGAGG+CGG 0.637286 8_3:-22901843 None:intergenic
GGGTAAACTTGGAACACTCG+AGG 0.640334 8_3:+22901102 Msa1282440:CDS
ATGGGAAGTAGAATCAGAGT+TGG 0.641548 8_3:+22895050 Msa1282440:CDS
CCCGAGGAACCAGATGAGGA+AGG 0.644618 8_3:-22901040 None:intergenic
CAGGCTCGCTCAGAATCGTG+AGG 0.649410 8_3:+22897966 Msa1282440:CDS
AAACCAGGAAGAATTTGCCA+TGG 0.653768 8_3:+22897262 Msa1282440:CDS
AATTCGATGCAGAATATGCA+AGG 0.654839 8_3:+22899605 Msa1282440:CDS
TCTGATTATAGATTCAAACT+CGG 0.655868 8_3:+22896938 Msa1282440:intron
GAATATGATGATGTGATGGT+GGG 0.661147 8_3:+22895019 Msa1282440:five_prime_UTR
AGTGGAATATGATGATGTGA+TGG 0.663379 8_3:+22895015 Msa1282440:five_prime_UTR
GGGAATGTGGCAAATTACAT+GGG 0.666390 8_3:+22901061 Msa1282440:CDS
CTTCCTCATCTGGTTCCTCG+GGG 0.671637 8_3:+22901041 Msa1282440:CDS
ACACCGATGACAAGAATCAG+CGG 0.687622 8_3:+22897324 Msa1282440:CDS
GCTCGCTCAGAATCGTGAGG+CGG 0.692281 8_3:+22897969 Msa1282440:CDS
GTAATTTGCCACATTCCCCG+AGG 0.720922 8_3:-22901056 None:intergenic
TCGATGCAGAATATGCAAGG+TGG 0.769831 8_3:+22899608 Msa1282440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTATTATTTTATTTTA+TGG + chr8_3:22894318-22894337 Msa1282440:intron 0.0%
!!! GAAAATTGATTTAAATAAAT+TGG - chr8_3:22898642-22898661 None:intergenic 10.0%
!! TATTAAAAAAAGAATAGTAA+AGG + chr8_3:22900725-22900744 Msa1282440:intron 10.0%
!!! TAGTAAGATATTTTATAATA+GGG - chr8_3:22901354-22901373 None:intergenic 10.0%
!!! ATAGTAAGATATTTTATAAT+AGG - chr8_3:22901355-22901374 None:intergenic 10.0%
!! TATTATAAAATATCTTACTA+TGG + chr8_3:22901354-22901373 Msa1282440:intron 10.0%
!! TGAATTTATGAATTAAGTAA+AGG - chr8_3:22894210-22894229 None:intergenic 15.0%
!!! TTTTTATTTATTTTTGCATC+TGG + chr8_3:22894474-22894493 Msa1282440:intron 15.0%
!!! TTTTATTTATTTTTGCATCT+GGG + chr8_3:22894475-22894494 Msa1282440:intron 15.0%
!!! TTCAGTTTTTTTTTTTTTTC+AGG + chr8_3:22894709-22894728 Msa1282440:intron 15.0%
!!! TTTTTTTTTTTGTTTTGGTT+AGG + chr8_3:22894961-22894980 Msa1282440:intron 15.0%
!!! TTTTTTTTTTGTTTTGGTTA+GGG + chr8_3:22894962-22894981 Msa1282440:intron 15.0%
!!! TTTAACTTTCTTATATCTTT+TGG + chr8_3:22895533-22895552 Msa1282440:intron 15.0%
!! ATCAAAATATATGACATAAT+TGG + chr8_3:22895959-22895978 Msa1282440:intron 15.0%
!! TCAAAATATATGACATAATT+GGG + chr8_3:22895960-22895979 Msa1282440:intron 15.0%
!!! TTACCATTTTTCAAATAAAT+TGG + chr8_3:22896502-22896521 Msa1282440:intron 15.0%
!! ATATTAACAAATTTATTGCA+TGG + chr8_3:22897867-22897886 Msa1282440:intron 15.0%
!! TTAAAGATAATAAATATGGT+TGG - chr8_3:22898542-22898561 None:intergenic 15.0%
!!! TGATTTAAATAAATTGGTTT+TGG - chr8_3:22898636-22898655 None:intergenic 15.0%
!!! TAATTTTTTACAACTATCAT+AGG - chr8_3:22898705-22898724 None:intergenic 15.0%
!! AGAAAAAAATAAAAAAATCG+TGG - chr8_3:22900004-22900023 None:intergenic 15.0%
!! TCATCTTAAATTACAAATTA+AGG + chr8_3:22900437-22900456 Msa1282440:intron 15.0%
!! TCTATTGTGTATAAAATTTA+TGG - chr8_3:22900487-22900506 None:intergenic 15.0%
!! AAACTTGTGTTTAATTAATT+TGG + chr8_3:22901156-22901175 Msa1282440:intron 15.0%
!! AACACAAATATCTATGATAA+AGG - chr8_3:22894640-22894659 None:intergenic 20.0%
!! ATATTTGTGTTACAACTAAA+GGG + chr8_3:22894649-22894668 Msa1282440:intron 20.0%
!!! ATTTGTTTTGTACTATGTTT+TGG + chr8_3:22894755-22894774 Msa1282440:intron 20.0%
!!! AATTCACTTCATAGTTTTTA+AGG + chr8_3:22894814-22894833 Msa1282440:intron 20.0%
!!! TAAGGTTGAAATTTATGTTT+TGG + chr8_3:22894832-22894851 Msa1282440:intron 20.0%
!!! GTTGGTTTTTTTTTTTGTTT+TGG + chr8_3:22894956-22894975 Msa1282440:intron 20.0%
!!! TTTTAGATTGCAAGTTTTTT+TGG + chr8_3:22895163-22895182 Msa1282440:intron 20.0%
!!! CATTTTAAATGTATCATCAA+GGG - chr8_3:22895214-22895233 None:intergenic 20.0%
!!! TCATTTTAAATGTATCATCA+AGG - chr8_3:22895215-22895234 None:intergenic 20.0%
!!! TTTTCATATAAGATGTAAGT+CGG - chr8_3:22895510-22895529 None:intergenic 20.0%
!!! ATGTTAAATAGCTTTTCTAA+AGG - chr8_3:22895906-22895925 None:intergenic 20.0%
!!! AACAAGTTTTATGAGATTAT+TGG - chr8_3:22896449-22896468 None:intergenic 20.0%
!! GTTCCAATTTATTTGAAAAA+TGG - chr8_3:22896508-22896527 None:intergenic 20.0%
!! AATAAATTGGAACTATACAA+TGG + chr8_3:22896515-22896534 Msa1282440:intron 20.0%
!! TGTTATCATTTAAACAAGAA+GGG - chr8_3:22897381-22897400 None:intergenic 20.0%
!! ATGTTATCATTTAAACAAGA+AGG - chr8_3:22897382-22897401 None:intergenic 20.0%
!! ATGATAACAACATTTATATG+GGG - chr8_3:22898091-22898110 None:intergenic 20.0%
!! CATGATAACAACATTTATAT+GGG - chr8_3:22898092-22898111 None:intergenic 20.0%
!! ACATGATAACAACATTTATA+TGG - chr8_3:22898093-22898112 None:intergenic 20.0%
!!! CATAGTATATTCATTTTCAT+AGG + chr8_3:22898769-22898788 Msa1282440:intron 20.0%
!! AACAGAAACAAATTATACTA+TGG - chr8_3:22899504-22899523 None:intergenic 20.0%
!! ACACAATTAAATGATTGTTA+TGG - chr8_3:22899571-22899590 None:intergenic 20.0%
!! AAAATAAAAAAATCGTGGTT+GGG - chr8_3:22899999-22900018 None:intergenic 20.0%
!! AAAAATAAAAAAATCGTGGT+TGG - chr8_3:22900000-22900019 None:intergenic 20.0%
!! TAAGAAATTCTATTGATACT+AGG + chr8_3:22900042-22900061 Msa1282440:intron 20.0%
!! AATAGAAATAGACAAAGAAA+TGG + chr8_3:22900089-22900108 Msa1282440:intron 20.0%
!!! TTCTATGATTACTTGTTAAA+CGG + chr8_3:22900125-22900144 Msa1282440:intron 20.0%
!! AATTACAAATTAAGGTGATT+CGG + chr8_3:22900445-22900464 Msa1282440:intron 20.0%
!! ATAAAATTTATGGTTTCGAT+TGG - chr8_3:22900477-22900496 None:intergenic 20.0%
! ATGAATTAAGTAAAGGAATG+AGG - chr8_3:22894203-22894222 None:intergenic 25.0%
! AATAAAAACCATCATGTTCA+TGG + chr8_3:22894354-22894373 Msa1282440:intron 25.0%
! TTAGTTCAACTTAGTATAAC+AGG + chr8_3:22894383-22894402 Msa1282440:intron 25.0%
! GATATTTGTGTTACAACTAA+AGG + chr8_3:22894648-22894667 Msa1282440:intron 25.0%
!!! TCAGGTTGAAATTTATGTTT+TGG + chr8_3:22894727-22894746 Msa1282440:intron 25.0%
!!! TTGATTTGTTGAGATTTATG+AGG + chr8_3:22894879-22894898 Msa1282440:intron 25.0%
!!! AATTTTGCTGTTGAATTTGT+TGG + chr8_3:22894938-22894957 Msa1282440:intron 25.0%
! TAGTTGTGAAATGTAGATTT+AGG + chr8_3:22895340-22895359 Msa1282440:intron 25.0%
! AGTTGTGAAATGTAGATTTA+GGG + chr8_3:22895341-22895360 Msa1282440:intron 25.0%
! TTGCCCTAAATTTAGATTTA+GGG + chr8_3:22895384-22895403 Msa1282440:intron 25.0%
! AAGCCCTAAATCTAAATTTA+GGG - chr8_3:22895390-22895409 None:intergenic 25.0%
!!! CTTATTTTGCATAAATCTCT+AGG + chr8_3:22895471-22895490 Msa1282440:intron 25.0%
! GAAAAGCTATTTAACATACA+AGG + chr8_3:22895909-22895928 Msa1282440:intron 25.0%
!!! CAAGGAAATGTTTTATTTTG+AGG + chr8_3:22895927-22895946 Msa1282440:intron 25.0%
!!! GTTTTATTTTGAGGAGTATA+TGG + chr8_3:22895936-22895955 Msa1282440:intron 25.0%
!!! GAAAAGGTTTTGTTACTAAT+AGG + chr8_3:22896041-22896060 Msa1282440:intron 25.0%
!!! TAGATTTGTTGATCGAAATT+TGG + chr8_3:22896067-22896086 Msa1282440:intron 25.0%
! AGAGAAAAATTGCACAAAAA+CGG - chr8_3:22896187-22896206 None:intergenic 25.0%
! CTAAAATGAAATGTACGATT+TGG + chr8_3:22896205-22896224 Msa1282440:intron 25.0%
! ATCCTAATTCTGACAAAATA+TGG + chr8_3:22896229-22896248 Msa1282440:intron 25.0%
!! ATCCATATTTTGTCAGAATT+AGG - chr8_3:22896234-22896253 None:intergenic 25.0%
!!! AATTTTCATGTTTCTGACTT+TGG + chr8_3:22896284-22896303 Msa1282440:CDS 25.0%
!! ACAATTACTTGTTGATTACT+TGG + chr8_3:22896562-22896581 Msa1282440:intron 25.0%
! AAAGATAGACAATGATATCT+AGG - chr8_3:22896857-22896876 None:intergenic 25.0%
! AAAATTCATTAGCAAAGGAA+AGG - chr8_3:22896918-22896937 None:intergenic 25.0%
! TCAGAAAAATTCATTAGCAA+AGG - chr8_3:22896923-22896942 None:intergenic 25.0%
! TCTGATTATAGATTCAAACT+CGG + chr8_3:22896938-22896957 Msa1282440:intron 25.0%
! TTTAACTCACTTAAAGTAAG+TGG + chr8_3:22896963-22896982 Msa1282440:CDS 25.0%
!!! ATGTTGAAGTTTTAGCATTA+CGG + chr8_3:22897082-22897101 Msa1282440:intron 25.0%
! TTCTGTATGAACACTTAATA+TGG - chr8_3:22897243-22897262 None:intergenic 25.0%
! TGTTACGTAAGTTTATAAAC+AGG + chr8_3:22897614-22897633 Msa1282440:intron 25.0%
! GTTACGTAAGTTTATAAACA+GGG + chr8_3:22897615-22897634 Msa1282440:intron 25.0%
! AGAGTCTACAATAATATTGA+AGG - chr8_3:22897943-22897962 None:intergenic 25.0%
! AGTTTGTACAAAAAGCTATT+CGG + chr8_3:22898147-22898166 Msa1282440:intron 25.0%
!!! AAGCCAATAATTTTAACATG+AGG + chr8_3:22898249-22898268 Msa1282440:intron 25.0%
!!! AGCCAATAATTTTAACATGA+GGG + chr8_3:22898250-22898269 Msa1282440:intron 25.0%
! AAACATGCATTAAACATTAC+AGG - chr8_3:22898379-22898398 None:intergenic 25.0%
!! CATGTTTGAATTATTTTCGA+GGG + chr8_3:22898392-22898411 Msa1282440:intron 25.0%
! AAGATAATAAATATGGTTGG+AGG - chr8_3:22898539-22898558 None:intergenic 25.0%
! AATGTAAAGTGATCTATGAT+TGG - chr8_3:22898599-22898618 None:intergenic 25.0%
! ACTTGTGTTTGATTAAATGA+TGG - chr8_3:22898666-22898685 None:intergenic 25.0%
! GAAAATGAATATACTATGTC+AGG - chr8_3:22898767-22898786 None:intergenic 25.0%
!! AATTTCTTGTTTCTTCTTGT+AGG + chr8_3:22898988-22899007 Msa1282440:intron 25.0%
!! ATTTCTTGTTTCTTCTTGTA+GGG + chr8_3:22898989-22899008 Msa1282440:intron 25.0%
! ATTATGTCTAATAGTCTATC+TGG + chr8_3:22899101-22899120 Msa1282440:intron 25.0%
! ACAGGAAAATGATTAAAATG+TGG + chr8_3:22899404-22899423 Msa1282440:intron 25.0%
! CAATCATTTAATTGTGTTTC+AGG + chr8_3:22899574-22899593 Msa1282440:intron 25.0%
!! CACATTATGATGAGATTTTT+AGG + chr8_3:22899728-22899747 Msa1282440:CDS 25.0%
! AATGTGATCCATATTGAAAA+GGG - chr8_3:22899886-22899905 None:intergenic 25.0%
! CAATAGAATTTCTTATTACG+AGG - chr8_3:22900037-22900056 None:intergenic 25.0%
! ATGAGGATTCAATAAAAGAA+GGG - chr8_3:22900176-22900195 None:intergenic 25.0%
! AATGAGGATTCAATAAAAGA+AGG - chr8_3:22900177-22900196 None:intergenic 25.0%
!! ACAATAACATTGATTGAATG+AGG - chr8_3:22900193-22900212 None:intergenic 25.0%
! CCTATTACTAGATATTTCAT+GGG - chr8_3:22900247-22900266 None:intergenic 25.0%
! ACCTATTACTAGATATTTCA+TGG - chr8_3:22900248-22900267 None:intergenic 25.0%
! AAAATCTAGCTATACAGTAA+CGG + chr8_3:22900278-22900297 Msa1282440:intron 25.0%
! ATTTAAGTATGAAGATTAGC+TGG + chr8_3:22900302-22900321 Msa1282440:intron 25.0%
!! TTTAAGTATGAAGATTAGCT+GGG + chr8_3:22900303-22900322 Msa1282440:intron 25.0%
! ACAAATAGTTATCCATTAAG+CGG - chr8_3:22900397-22900416 None:intergenic 25.0%
!! GATAACTATTTGTTACCAAT+GGG + chr8_3:22900404-22900423 Msa1282440:intron 25.0%
! TTAAGAACAAGAACTTTCTT+TGG + chr8_3:22900681-22900700 Msa1282440:intron 25.0%
!!! ACCGAGTTTTAATATTTTGA+AGG + chr8_3:22900803-22900822 Msa1282440:intron 25.0%
! GCCTTCAAAATATTAAAACT+CGG - chr8_3:22900807-22900826 None:intergenic 25.0%
!! ATTAATTTGGTACATTTGCA+TGG + chr8_3:22901169-22901188 Msa1282440:intron 25.0%
! AAATTCATAACCTAAAGTGT+CGG - chr8_3:22901240-22901259 None:intergenic 25.0%
!! ATTTCTGTGTATTTGTTACA+AGG + chr8_3:22901381-22901400 Msa1282440:intron 25.0%
! ACTACAATCATTTAATCTCT+TGG - chr8_3:22901541-22901560 None:intergenic 25.0%
! CATCGTCATCAAAATTTTCA+AGG + chr8_3:22894252-22894271 Msa1282440:five_prime_UTR 30.0%
!! GTCATCAAAATTTTCAAGGT+GGG + chr8_3:22894256-22894275 Msa1282440:intron 30.0%
AAAATTCACCATGAACATGA+TGG - chr8_3:22894365-22894384 None:intergenic 30.0%
!! TTTGATCTTGTTGATGATGT+TGG + chr8_3:22894419-22894438 Msa1282440:intron 30.0%
! TTGACTTTTGAGCACTTATT+TGG + chr8_3:22894549-22894568 Msa1282440:intron 30.0%
! TATGATAAAGGCACAAACTT+TGG - chr8_3:22894628-22894647 None:intergenic 30.0%
TTTCTTTGTGTTCTTGTGAT+TGG + chr8_3:22894684-22894703 Msa1282440:intron 30.0%
! TGTTTTGTGTTTTCTGTGAT+TGG + chr8_3:22894791-22894810 Msa1282440:intron 30.0%
!!! TTTGTTTTGGTTAGGGTTTT+TGG + chr8_3:22894969-22894988 Msa1282440:intron 30.0%
! TATATTTTGTTGAGAAGCAG+TGG + chr8_3:22894997-22895016 Msa1282440:five_prime_UTR 30.0%
!! TTGTTGCTTTGAATGAAGAA+TGG + chr8_3:22895259-22895278 Msa1282440:intron 30.0%
GTTGCCCTAAATTTAGATTT+AGG + chr8_3:22895383-22895402 Msa1282440:intron 30.0%
CAAGCCCTAAATCTAAATTT+AGG - chr8_3:22895391-22895410 None:intergenic 30.0%
! ATTTAGATTTAGGGCTTGTT+TGG + chr8_3:22895393-22895412 Msa1282440:intron 30.0%
! GTTTGGATTGACTTATTTAC+TGG + chr8_3:22895410-22895429 Msa1282440:intron 30.0%
AATAATTGTCATAGTCCAGT+TGG - chr8_3:22895654-22895673 None:intergenic 30.0%
GATAAGGTTTAACCTAGAAT+GGG - chr8_3:22895801-22895820 None:intergenic 30.0%
TGATAAGGTTTAACCTAGAA+TGG - chr8_3:22895802-22895821 None:intergenic 30.0%
TATACAATCTCCACATGATA+AGG - chr8_3:22895817-22895836 None:intergenic 30.0%
TCATTGTATAGTATGTAACG+TGG + chr8_3:22895857-22895876 Msa1282440:intron 30.0%
CATTGTATAGTATGTAACGT+GGG + chr8_3:22895858-22895877 Msa1282440:intron 30.0%
ATTGTATAGTATGTAACGTG+GGG + chr8_3:22895859-22895878 Msa1282440:intron 30.0%
! GTACTTGACATGTTTTCTTT+GGG + chr8_3:22896119-22896138 Msa1282440:intron 30.0%
! TACTTGACATGTTTTCTTTG+GGG + chr8_3:22896120-22896139 Msa1282440:intron 30.0%
ACTTGGCAAAGATAATGTTA+AGG + chr8_3:22896579-22896598 Msa1282440:intron 30.0%
TTGTCAAATGGAAACTATAG+TGG - chr8_3:22896718-22896737 None:intergenic 30.0%
!! AAGTACAAAGTGTTGTCAAA+TGG - chr8_3:22896730-22896749 None:intergenic 30.0%
! ATTCTAGTGTTGTTGAATAG+CGG - chr8_3:22896823-22896842 None:intergenic 30.0%
TTTGTTAATTGCAACCTATG+TGG - chr8_3:22897191-22897210 None:intergenic 30.0%
AAGTGCTTATGTATAAGCTA+CGG - chr8_3:22897641-22897660 None:intergenic 30.0%
CATCTTATTAAGGCTCTATT+TGG - chr8_3:22897709-22897728 None:intergenic 30.0%
CAATGCTACTCATCTTATTA+AGG - chr8_3:22897719-22897738 None:intergenic 30.0%
AAAGGATAAATCAGATCAGA+AGG + chr8_3:22897838-22897857 Msa1282440:CDS 30.0%
TCCTTACTTTCTTTCTCAAT+CGG - chr8_3:22898005-22898024 None:intergenic 30.0%
GTTTGTACAAAAAGCTATTC+GGG + chr8_3:22898148-22898167 Msa1282440:intron 30.0%
! ATGTCGGTTACAAAGTTATA+AGG - chr8_3:22898181-22898200 None:intergenic 30.0%
! CAAAAAGTGTAACTTCCTAT+TGG - chr8_3:22898207-22898226 None:intergenic 30.0%
! CAATAGGAAGTTACACTTTT+TGG + chr8_3:22898205-22898224 Msa1282440:intron 30.0%
!! GCCAATAATTTTAACATGAG+GGG + chr8_3:22898251-22898270 Msa1282440:intron 30.0%
!! CCAATAATTTTAACATGAGG+GGG + chr8_3:22898252-22898271 Msa1282440:intron 30.0%
!! CAATAATTTTAACATGAGGG+GGG + chr8_3:22898253-22898272 Msa1282440:intron 30.0%
!! AATAATTTTAACATGAGGGG+GGG + chr8_3:22898254-22898273 Msa1282440:intron 30.0%
! GCATGTTTGAATTATTTTCG+AGG + chr8_3:22898391-22898410 Msa1282440:intron 30.0%
AACACAAGTGTATACTTCTT+TGG + chr8_3:22898677-22898696 Msa1282440:intron 30.0%
CAAGAAGAAACAAGAAATTC+AGG - chr8_3:22898987-22899006 None:intergenic 30.0%
!! AGTAGATTTGAGGTATTGTT+TGG + chr8_3:22899196-22899215 Msa1282440:intron 30.0%
!! TTTGAGGTATTGTTTGGTAT+AGG + chr8_3:22899202-22899221 Msa1282440:intron 30.0%
AATGAACCACCATTTATGAA+AGG + chr8_3:22899376-22899395 Msa1282440:intron 30.0%
ATGAACCACCATTTATGAAA+GGG + chr8_3:22899377-22899396 Msa1282440:intron 30.0%
GAATGTGATCCATATTGAAA+AGG - chr8_3:22899887-22899906 None:intergenic 30.0%
! TTCAATTGATTTCAAGGAAC+AGG - chr8_3:22899938-22899957 None:intergenic 30.0%
AGAAATAGACAAAGAAATGG+TGG + chr8_3:22900092-22900111 Msa1282440:intron 30.0%
GAAATAGACAAAGAAATGGT+GGG + chr8_3:22900093-22900112 Msa1282440:intron 30.0%
ACAAGTAATCATAGAAACGA+TGG - chr8_3:22900121-22900140 None:intergenic 30.0%
TGAGGATTCAATAAAAGAAG+GGG - chr8_3:22900175-22900194 None:intergenic 30.0%
CCCATGAAATATCTAGTAAT+AGG + chr8_3:22900244-22900263 Msa1282440:intron 30.0%
AGTCCGTTATTGCAAAATTT+AGG + chr8_3:22900340-22900359 Msa1282440:intron 30.0%
GTCCGTTATTGCAAAATTTA+GGG + chr8_3:22900341-22900360 Msa1282440:intron 30.0%
! TGCCCTAAATTTTGCAATAA+CGG - chr8_3:22900346-22900365 None:intergenic 30.0%
CAAATAGTTATCCATTAAGC+GGG - chr8_3:22900396-22900415 None:intergenic 30.0%
! GGATAACTATTTGTTACCAA+TGG + chr8_3:22900403-22900422 Msa1282440:intron 30.0%
GATGAAAAATACTTTCCCAT+TGG - chr8_3:22900422-22900441 None:intergenic 30.0%
! GATTTTGTTACATTTCGGAT+TGG + chr8_3:22900626-22900645 Msa1282440:intron 30.0%
CATGAAATAGTGAAAACACA+AGG - chr8_3:22901319-22901338 None:intergenic 30.0%
ATTGTCGTGTTGTCAATATT+CGG - chr8_3:22901444-22901463 None:intergenic 30.0%
AATATTGACAACACGACAAT+CGG + chr8_3:22901444-22901463 Msa1282440:CDS 30.0%
ATCAATCACCATCAATACTT+TGG + chr8_3:22901593-22901612 Msa1282440:three_prime_UTR 30.0%
!! TATCATGACCAAAGTATTGA+TGG - chr8_3:22901604-22901623 None:intergenic 30.0%
TTGTACTTGTAGTCTTTGTA+AGG + chr8_3:22901653-22901672 Msa1282440:three_prime_UTR 30.0%
ATTGTCCATTGTAATTGTCA+TGG + chr8_3:22901762-22901781 Msa1282440:three_prime_UTR 30.0%
!!! TTTTTCGAACAAAGGTACTT+TGG + chr8_3:22901796-22901815 Msa1282440:three_prime_UTR 30.0%
!!! TTTTCGAACAAAGGTACTTT+GGG + chr8_3:22901797-22901816 Msa1282440:three_prime_UTR 30.0%
! GTACTTTGGGTTATATTTAG+CGG + chr8_3:22901810-22901829 Msa1282440:three_prime_UTR 30.0%
ACAAGAAGACATCTAGAGAT+TGG + chr8_3:22894111-22894130 Msa1282440:five_prime_UTR 35.0%
AGAAAGAGAGAAAGAGAGAA+AGG - chr8_3:22894159-22894178 None:intergenic 35.0%
ATGAGGAAAAAGATAGACAG+AGG - chr8_3:22894186-22894205 None:intergenic 35.0%
!! CGTCATCAAAATTTTCAAGG+TGG + chr8_3:22894255-22894274 Msa1282440:intron 35.0%
!! CAAAATTTTCAAGGTGGGTT+TGG + chr8_3:22894261-22894280 Msa1282440:intron 35.0%
!! CTTGTTGATGATGTTGGATT+TGG + chr8_3:22894425-22894444 Msa1282440:intron 35.0%
!! TAACTGAGTTGGTGTCAAAT+TGG + chr8_3:22894500-22894519 Msa1282440:intron 35.0%
GTTGAGATTTATGAGGTTGT+TGG + chr8_3:22894886-22894905 Msa1282440:intron 35.0%
! GATTTATGAGGTTGTTGGTT+TGG + chr8_3:22894891-22894910 Msa1282440:intron 35.0%
! AGTGGAATATGATGATGTGA+TGG + chr8_3:22895015-22895034 Msa1282440:five_prime_UTR 35.0%
! GAATATGATGATGTGATGGT+GGG + chr8_3:22895019-22895038 Msa1282440:five_prime_UTR 35.0%
AGAAATATACCATGCATCGT+CGG - chr8_3:22895123-22895142 None:intergenic 35.0%
GAATGAAGAATGGATAGTGA+AGG + chr8_3:22895269-22895288 Msa1282440:intron 35.0%
TCACTGTGAATATCTTCCTT+GGG + chr8_3:22895745-22895764 Msa1282440:intron 35.0%
GTTTAACCTAGAATGGGAAA+TGG - chr8_3:22895795-22895814 None:intergenic 35.0%
CTAGGTTAAACCTTATCATG+TGG + chr8_3:22895804-22895823 Msa1282440:intron 35.0%
TTGTTGATCGAAATTTGGCA+TGG + chr8_3:22896072-22896091 Msa1282440:intron 35.0%
! GGTACTTGACATGTTTTCTT+TGG + chr8_3:22896118-22896137 Msa1282440:intron 35.0%
ATGGATTTCAGCTATACAGA+TGG + chr8_3:22896248-22896267 Msa1282440:intron 35.0%
TGGATTTCAGCTATACAGAT+GGG + chr8_3:22896249-22896268 Msa1282440:intron 35.0%
ACATGTAAACTTTGCCAAGT+CGG - chr8_3:22896377-22896396 None:intergenic 35.0%
TGTTGTATTATCTCGTGTCT+TGG + chr8_3:22896419-22896438 Msa1282440:intron 35.0%
TTGTACTTAATAGCGTATCG+TGG + chr8_3:22896742-22896761 Msa1282440:intron 35.0%
TTCATTAGCAAAGGAAAGGA+TGG - chr8_3:22896914-22896933 None:intergenic 35.0%
TTCTAACGAATTTCCTGCTT+CGG + chr8_3:22897054-22897073 Msa1282440:intron 35.0%
TTCAACATTTATACCGAAGC+AGG - chr8_3:22897070-22897089 None:intergenic 35.0%
CATTACGGAACATCTAATTG+CGG + chr8_3:22897097-22897116 Msa1282440:intron 35.0%
ATGTTGGCAACTAAAGAGAA+AGG - chr8_3:22897133-22897152 None:intergenic 35.0%
AAGCTTCAATCATCAAATCC+AGG + chr8_3:22897209-22897228 Msa1282440:CDS 35.0%
AAGTGTTCATACAGAAAACC+AGG + chr8_3:22897247-22897266 Msa1282440:CDS 35.0%
! AGAAGGGAGAAAAAGCATAA+AGG - chr8_3:22897365-22897384 None:intergenic 35.0%
TTGACAAGTTCAACTTGAAC+TGG - chr8_3:22897440-22897459 None:intergenic 35.0%
TTTATCCTTTGATCTGTCAC+TGG - chr8_3:22897828-22897847 None:intergenic 35.0%
AACTTCCTATTGGACAATGT+CGG - chr8_3:22898197-22898216 None:intergenic 35.0%
TGGTCTTCCTTCAGTTAAAT+TGG + chr8_3:22898225-22898244 Msa1282440:intron 35.0%
CCCCCTCATGTTAAAATTAT+TGG - chr8_3:22898255-22898274 None:intergenic 35.0%
!! ATAATTTTAACATGAGGGGG+GGG + chr8_3:22898255-22898274 Msa1282440:intron 35.0%
CAGGTCATATGATTCTTCAA+CGG - chr8_3:22898360-22898379 None:intergenic 35.0%
CTTCAAGTCAAAACTCATTC+TGG - chr8_3:22898497-22898516 None:intergenic 35.0%
TACAATTCAATGGTCAATCG+AGG - chr8_3:22898741-22898760 None:intergenic 35.0%
TGTCAGGTCTTACAATTCAA+TGG - chr8_3:22898751-22898770 None:intergenic 35.0%
ACTTTCCAATTGTTGGACAT+AGG - chr8_3:22898795-22898814 None:intergenic 35.0%
AACGACTACTTTCCAATTGT+TGG - chr8_3:22898802-22898821 None:intergenic 35.0%
AAAATAGAGTACGACTGCTA+CGG - chr8_3:22898961-22898980 None:intergenic 35.0%
GAAAGTAAGAAGAGAGAAGT+AGG + chr8_3:22899133-22899152 Msa1282440:intron 35.0%
TTGTACCCTTTCATAAATGG+TGG - chr8_3:22899385-22899404 None:intergenic 35.0%
CTGTTGTACCCTTTCATAAA+TGG - chr8_3:22899388-22899407 None:intergenic 35.0%
! CATTTATGAAAGGGTACAAC+AGG + chr8_3:22899386-22899405 Msa1282440:intron 35.0%
AATTCGATGCAGAATATGCA+AGG + chr8_3:22899605-22899624 Msa1282440:CDS 35.0%
ATCAACAATCATGCGAAGTT+CGG - chr8_3:22899698-22899717 None:intergenic 35.0%
!! GATGAGATTTTTAGGCTGAA+AGG + chr8_3:22899736-22899755 Msa1282440:CDS 35.0%
!!! GATGTTTTCCATTTGTTGTC+TGG + chr8_3:22899775-22899794 Msa1282440:CDS 35.0%
! TATGCTGACCCTTTTCAATA+TGG + chr8_3:22899875-22899894 Msa1282440:intron 35.0%
AGTCGAGTATCAGCATAAAA+AGG - chr8_3:22899909-22899928 None:intergenic 35.0%
AAAAGCCATTGGAAAGATTC+GGG - chr8_3:22899962-22899981 None:intergenic 35.0%
CAAAAGCCATTGGAAAGATT+CGG - chr8_3:22899963-22899982 None:intergenic 35.0%
TAAAAAAATCGTGGTTGGGA+AGG - chr8_3:22899995-22900014 None:intergenic 35.0%
! TGATTACTTGTTAAACGGTG+AGG + chr8_3:22900130-22900149 Msa1282440:intron 35.0%
ACTTGTACAGTTCACACTTA+TGG + chr8_3:22900215-22900234 Msa1282440:intron 35.0%
CTTGTACAGTTCACACTTAT+GGG + chr8_3:22900216-22900235 Msa1282440:intron 35.0%
!! TTTGCAATAACGGACTAAGA+GGG - chr8_3:22900336-22900355 None:intergenic 35.0%
!!! TTTTGCAATAACGGACTAAG+AGG - chr8_3:22900337-22900356 None:intergenic 35.0%
! ATTGGATTTTTCCCGCTTAA+TGG + chr8_3:22900382-22900401 Msa1282440:intron 35.0%
! CGGGAGATTTTGTTACATTT+CGG + chr8_3:22900621-22900640 Msa1282440:intron 35.0%
TGTATTTAACAGCAGGCTTA+GGG - chr8_3:22900765-22900784 None:intergenic 35.0%
ATGTATTTAACAGCAGGCTT+AGG - chr8_3:22900766-22900785 None:intergenic 35.0%
TGAGACATGTATTTAACAGC+AGG - chr8_3:22900772-22900791 None:intergenic 35.0%
TTGACTTAGTGTGACAAATG+TGG + chr8_3:22900861-22900880 Msa1282440:intron 35.0%
ACAGCTTCTGGTAAATCAAT+TGG + chr8_3:22900886-22900905 Msa1282440:intron 35.0%
! TGGTACATTTGCATGGTTTT+TGG + chr8_3:22901176-22901195 Msa1282440:intron 35.0%
AAAAGTAATCATGGATGGCA+AGG - chr8_3:22901480-22901499 None:intergenic 35.0%
!! CCATCCATGATTACTTTTCA+CGG + chr8_3:22901482-22901501 Msa1282440:CDS 35.0%
TTGCTCTTAACAAGTGTTCT+TGG + chr8_3:22901628-22901647 Msa1282440:three_prime_UTR 35.0%
CCATTCCATGACAATTACAA+TGG - chr8_3:22901770-22901789 None:intergenic 35.0%
CCATTGTAATTGTCATGGAA+TGG + chr8_3:22901767-22901786 Msa1282440:three_prime_UTR 35.0%
TAATTGTCATGGAATGGCTT+TGG + chr8_3:22901773-22901792 Msa1282440:three_prime_UTR 35.0%
ATTGAACTTATACTGAGAGG+CGG - chr8_3:22901846-22901865 None:intergenic 35.0%
AGAAAGGAGAGAGACTTGTA+TGG - chr8_3:22894143-22894162 None:intergenic 40.0%
!!! GTTCTTGTTTTGCGTGTGTT+TGG + chr8_3:22894580-22894599 Msa1282440:intron 40.0%
!!! TTTTGCGTGTGTTTGGTTTG+TGG + chr8_3:22894587-22894606 Msa1282440:intron 40.0%
!! TTTGCGTGTGTTTGGTTTGT+GGG + chr8_3:22894588-22894607 Msa1282440:intron 40.0%
! GGAATATGATGATGTGATGG+TGG + chr8_3:22895018-22895037 Msa1282440:five_prime_UTR 40.0%
ATGGGAAGTAGAATCAGAGT+TGG + chr8_3:22895050-22895069 Msa1282440:CDS 40.0%
!! AGTTGGTGTTGAAGATGAGA+AGG + chr8_3:22895067-22895086 Msa1282440:CDS 40.0%
!! GTTGGTGTTGAAGATGAGAA+GGG + chr8_3:22895068-22895087 Msa1282440:CDS 40.0%
TAGTCCAGTTGGTCCATATA+AGG - chr8_3:22895643-22895662 None:intergenic 40.0%
GTCACTGTGAATATCTTCCT+TGG + chr8_3:22895744-22895763 Msa1282440:intron 40.0%
ACACTTCCATTTCCCATTCT+AGG + chr8_3:22895786-22895805 Msa1282440:intron 40.0%
! ACATAATTGGGCTCTAGTCT+TGG + chr8_3:22895972-22895991 Msa1282440:intron 40.0%
TATGCAGCTAGTTGTATGAC+AGG + chr8_3:22896019-22896038 Msa1282440:intron 40.0%
GCTAGTTGTATGACAGGAAA+AGG + chr8_3:22896025-22896044 Msa1282440:intron 40.0%
TCGAAATTTGGCATGGTTCA+TGG + chr8_3:22896079-22896098 Msa1282440:intron 40.0%
TAGTCAACCATATCGCTTAG+AGG + chr8_3:22896313-22896332 Msa1282440:CDS 40.0%
AGTCTTCTTGTAATCCGACT+TGG + chr8_3:22896360-22896379 Msa1282440:intron 40.0%
TTGCAGATCGCAGAAAATAG+TGG + chr8_3:22896656-22896675 Msa1282440:intron 40.0%
TGCAGATCGCAGAAAATAGT+GGG + chr8_3:22896657-22896676 Msa1282440:intron 40.0%
TCACACCAGTTCTCTTGATA+AGG + chr8_3:22897010-22897029 Msa1282440:CDS 40.0%
ACTCACCTTATCAAGAGAAC+TGG - chr8_3:22897018-22897037 None:intergenic 40.0%
CAATCATCAAATCCAGGTAG+CGG + chr8_3:22897215-22897234 Msa1282440:CDS 40.0%
AAACCAGGAAGAATTTGCCA+TGG + chr8_3:22897262-22897281 Msa1282440:CDS 40.0%
TCTGTCGAAATATCAGTCCT+AGG - chr8_3:22897299-22897318 None:intergenic 40.0%
AGGACTGATATTTCGACAGA+TGG + chr8_3:22897299-22897318 Msa1282440:CDS 40.0%
AGATGTGCAAATGCAGGATA+GGG - chr8_3:22897412-22897431 None:intergenic 40.0%
! AAGCTATGTTGCAGAGCTTT+TGG - chr8_3:22897507-22897526 None:intergenic 40.0%
!! AAATCAATCCCTTGCTGTTG+CGG + chr8_3:22897793-22897812 Msa1282440:CDS 40.0%
TATTATTGTAGACTCTCCGC+AGG + chr8_3:22897947-22897966 Msa1282440:intron 40.0%
GCCGATTGAGAAAGAAAGTA+AGG + chr8_3:22898001-22898020 Msa1282440:intron 40.0%
TGTAACCGACATTGTCCAAT+AGG + chr8_3:22898189-22898208 Msa1282440:intron 40.0%
! TGGCTTGCCAATTTAACTGA+AGG - chr8_3:22898235-22898254 None:intergenic 40.0%
!! TAATTTTAACATGAGGGGGG+GGG + chr8_3:22898256-22898275 Msa1282440:intron 40.0%
CAAGTCAAAACTCATTCTGG+AGG - chr8_3:22898494-22898513 None:intergenic 40.0%
ATAGGCCTATGTCCAACAAT+TGG + chr8_3:22898787-22898806 Msa1282440:intron 40.0%
ACTGGTGCAATCTAATTGCA+AGG - chr8_3:22898888-22898907 None:intergenic 40.0%
CGTGTCGCACAAAAATCAAA+AGG - chr8_3:22898935-22898954 None:intergenic 40.0%
GAACAAACACATTCACTGAG+TGG + chr8_3:22899034-22899053 Msa1282440:intron 40.0%
ACACATTCACTGAGTGGAAA+TGG + chr8_3:22899040-22899059 Msa1282440:intron 40.0%
TGAGCAGTGTAGTAGATTTG+AGG + chr8_3:22899186-22899205 Msa1282440:intron 40.0%
! ACTATGGTGTTTTACGCTGA+TGG - chr8_3:22899488-22899507 None:intergenic 40.0%
GAACTTCGCATGATTGTTGA+TGG + chr8_3:22899697-22899716 Msa1282440:CDS 40.0%
!! CATGATTGTTGATGGTGTAG+TGG + chr8_3:22899705-22899724 Msa1282440:CDS 40.0%
CATAAGAAACACCTTTCAGC+AGG - chr8_3:22899814-22899833 None:intergenic 40.0%
!! CTGCTGAAAGGTGTTTCTTA+TGG + chr8_3:22899812-22899831 Msa1282440:CDS 40.0%
!! GAAAGGTGTTTCTTATGGCT+TGG + chr8_3:22899817-22899836 Msa1282440:CDS 40.0%
!!! TCTTATGGCTTGGTGGTTTT+CGG + chr8_3:22899827-22899846 Msa1282440:CDS 40.0%
! TCGGGGTTCAATTGATTTCA+AGG - chr8_3:22899944-22899963 None:intergenic 40.0%
AAAGCCATTGGAAAGATTCG+GGG - chr8_3:22899961-22899980 None:intergenic 40.0%
GTTATAGCAGCAAAAGCCAT+TGG - chr8_3:22899973-22899992 None:intergenic 40.0%
TTCAATAAAAGAAGGGGCTC+CGG - chr8_3:22900169-22900188 None:intergenic 40.0%
TAACAAAATCTCCCGCTCTT+CGG - chr8_3:22900616-22900635 None:intergenic 40.0%
AACAAGAACTTTCTTTGGCG+TGG + chr8_3:22900686-22900705 Msa1282440:intron 40.0%
ACAAATGTGGTTACAGCTTC+TGG + chr8_3:22900874-22900893 Msa1282440:intron 40.0%
CAATGCATCTTCTGCTTGTT+GGG - chr8_3:22900963-22900982 None:intergenic 40.0%
ACAATGCATCTTCTGCTTGT+TGG - chr8_3:22900964-22900983 None:intergenic 40.0%
GGGAATGTGGCAAATTACAT+GGG + chr8_3:22901061-22901080 Msa1282440:CDS 40.0%
GGCAAATTACATGGGTCAAA+TGG + chr8_3:22901069-22901088 Msa1282440:CDS 40.0%
TTACATGGGTCAAATGGCTA+TGG + chr8_3:22901075-22901094 Msa1282440:CDS 40.0%
!! GCATTTGTTGTAGTGTTTGC+TGG - chr8_3:22901420-22901439 None:intergenic 40.0%
CCGTGAAAAGTAATCATGGA+TGG - chr8_3:22901485-22901504 None:intergenic 40.0%
GCATAGTCTAGGAATGGAAT+TGG + chr8_3:22901701-22901720 Msa1282440:three_prime_UTR 40.0%
!!! GGCTTTGGTTTTTCGAACAA+AGG + chr8_3:22901788-22901807 Msa1282440:three_prime_UTR 40.0%
TTGAACTTATACTGAGAGGC+GGG - chr8_3:22901845-22901864 None:intergenic 40.0%
!! GTTTGGTTTGTGGGTACACA+TGG + chr8_3:22894597-22894616 Msa1282440:intron 45.0%
ATGAGAAGGGAGCAGAAAGA+GGG + chr8_3:22895081-22895100 Msa1282440:CDS 45.0%
CAGCTTACAAACAGTCTCAC+AGG - chr8_3:22895444-22895463 None:intergenic 45.0%
CAAAACCGCTCTGCCTTATA+TGG + chr8_3:22895627-22895646 Msa1282440:intron 45.0%
TTGGTCCATATAAGGCAGAG+CGG - chr8_3:22895635-22895654 None:intergenic 45.0%
TCTGCCTTATATGGACCAAC+TGG + chr8_3:22895636-22895655 Msa1282440:intron 45.0%
CTGTGAATATCTTCCTTGGG+TGG + chr8_3:22895748-22895767 Msa1282440:intron 45.0%
TCATGGTGTATCGTGTTCAC+TGG + chr8_3:22896096-22896115 Msa1282440:intron 45.0%
CATGGTGTATCGTGTTCACT+GGG + chr8_3:22896097-22896116 Msa1282440:intron 45.0%
ACAGCATCCTCTAAGCGATA+TGG - chr8_3:22896323-22896342 None:intergenic 45.0%
AGTGGCCAAACAATTTCTCC+TGG + chr8_3:22896981-22897000 Msa1282440:CDS 45.0%
CAAGAGAACTGGTGTGAACA+GGG - chr8_3:22897007-22897026 None:intergenic 45.0%
TCAAGAGAACTGGTGTGAAC+AGG - chr8_3:22897008-22897027 None:intergenic 45.0%
! GGGCTTTTATCACGTGATGT+TGG - chr8_3:22897149-22897168 None:intergenic 45.0%
CTTAATATGGTACCGCTACC+TGG - chr8_3:22897230-22897249 None:intergenic 45.0%
CGAAATATCAGTCCTAGGAC+TGG - chr8_3:22897294-22897313 None:intergenic 45.0%
ACACCGATGACAAGAATCAG+CGG + chr8_3:22897324-22897343 Msa1282440:CDS 45.0%
CAGATGTGCAAATGCAGGAT+AGG - chr8_3:22897413-22897432 None:intergenic 45.0%
CTATCCTGCATTTGCACATC+TGG + chr8_3:22897411-22897430 Msa1282440:intron 45.0%
GTTTCCAGATGTGCAAATGC+AGG - chr8_3:22897418-22897437 None:intergenic 45.0%
!! AATCAATCCCTTGCTGTTGC+GGG + chr8_3:22897794-22897813 Msa1282440:CDS 45.0%
TGACTCCAGTGACAGATCAA+AGG + chr8_3:22897820-22897839 Msa1282440:CDS 45.0%
!! AATTTTAACATGAGGGGGGG+GGG + chr8_3:22898257-22898276 Msa1282440:intron 45.0%
CTGAAGCTCTTGCTCTAGTT+GGG - chr8_3:22898834-22898853 None:intergenic 45.0%
ACTGAATCTAACCTGTTGCC+TGG - chr8_3:22898861-22898880 None:intergenic 45.0%
AGAAAGAGAGAGCAGACAAC+TGG - chr8_3:22898906-22898925 None:intergenic 45.0%
GGGAGTCTTCATATCAAGCT+CGG + chr8_3:22899009-22899028 Msa1282440:intron 45.0%
GGAGTCTTCATATCAAGCTC+GGG + chr8_3:22899010-22899029 Msa1282440:CDS 45.0%
! TGGTGTTTTACGCTGATGGT+GGG - chr8_3:22899484-22899503 None:intergenic 45.0%
! ATGGTGTTTTACGCTGATGG+TGG - chr8_3:22899485-22899504 None:intergenic 45.0%
TCGATGCAGAATATGCAAGG+TGG + chr8_3:22899608-22899627 Msa1282440:CDS 45.0%
!! TCCATTTGTTGTCTGGCATG+TGG + chr8_3:22899782-22899801 Msa1282440:CDS 45.0%
TCCACATGCCAGACAACAAA+TGG - chr8_3:22899786-22899805 None:intergenic 45.0%
TGTGGAAAACACCTGCTGAA+AGG + chr8_3:22899800-22899819 Msa1282440:CDS 45.0%
! AGGTGTTTCTTATGGCTTGG+TGG + chr8_3:22899820-22899839 Msa1282440:CDS 45.0%
TCGGTCATCTGAACTTCTCA+AGG + chr8_3:22899846-22899865 Msa1282440:CDS 45.0%
CATCTGAACTTCTCAAGGTG+AGG + chr8_3:22899851-22899870 Msa1282440:intron 45.0%
TGAACCCCGAATCTTTCCAA+TGG + chr8_3:22899954-22899973 Msa1282440:intron 45.0%
ACACCCTAGTACATGTTCCT+CGG + chr8_3:22900576-22900595 Msa1282440:intron 45.0%
AACAAAATCTCCCGCTCTTC+GGG - chr8_3:22900615-22900634 None:intergenic 45.0%
TTGGGAGGATTGTTGCAAGT+TGG - chr8_3:22900945-22900964 None:intergenic 45.0%
AGCAGAAGATGCATTGTCTC+AGG + chr8_3:22900967-22900986 Msa1282440:CDS 45.0%
GCAGAAGATGCATTGTCTCA+GGG + chr8_3:22900968-22900987 Msa1282440:CDS 45.0%
AGATGCATTGTCTCAGGGTA+TGG + chr8_3:22900973-22900992 Msa1282440:CDS 45.0%
GGGGAATGTGGCAAATTACA+TGG + chr8_3:22901060-22901079 Msa1282440:CDS 45.0%
GAGTGTTCCAAGTTTACCCA+TGG - chr8_3:22901101-22901120 None:intergenic 45.0%
GGTAAACTTGGAACACTCGA+GGG + chr8_3:22901103-22901122 Msa1282440:CDS 45.0%
!! CTATGTAGCACCGACACTTT+AGG + chr8_3:22901227-22901246 Msa1282440:intron 45.0%
GCAGCCGTGAAAAGTAATCA+TGG - chr8_3:22901489-22901508 None:intergenic 45.0%
TCCTAGAGTTCGCATAGTCT+AGG + chr8_3:22901690-22901709 Msa1282440:three_prime_UTR 45.0%
TCCTAGACTATGCGAACTCT+AGG - chr8_3:22901694-22901713 None:intergenic 45.0%
GAGTTCGCATAGTCTAGGAA+TGG + chr8_3:22901695-22901714 Msa1282440:three_prime_UTR 45.0%
!! AAATTTAAAGATAATAAATA+TGG - chr8_3:22898546-22898565 None:intergenic 5.0%
!!! CATAATTTTTTATTTAAAAT+TGG + chr8_3:22900364-22900383 Msa1282440:intron 5.0%
GCATCTGGGTCTAACTGAGT+TGG + chr8_3:22894489-22894508 Msa1282440:intron 50.0%
!! TGATGGTGGGAGTGTTGCAT+GGG + chr8_3:22895032-22895051 Msa1282440:exon 50.0%
GATGAGAAGGGAGCAGAAAG+AGG + chr8_3:22895080-22895099 Msa1282440:CDS 50.0%
GCATCGTCGGAATTGAAGCT+CGG - chr8_3:22895110-22895129 None:intergenic 50.0%
GCTTCAATTCCGACGATGCA+TGG + chr8_3:22895111-22895130 Msa1282440:CDS 50.0%
! GCAGAGCGGTTTTGCATAGA+GGG - chr8_3:22895621-22895640 None:intergenic 50.0%
TTCCTTGGGTGGTTAGAGTG+AGG + chr8_3:22895759-22895778 Msa1282440:intron 50.0%
!! GCTCTAGTCTTGGAGAGCAT+CGG + chr8_3:22895982-22896001 Msa1282440:intron 50.0%
! GAGGATGCTGTTGTTCTGAG+TGG + chr8_3:22896332-22896351 Msa1282440:CDS 50.0%
CAGGGCCAGGAGAAATTGTT+TGG - chr8_3:22896989-22897008 None:intergenic 50.0%
! GCTCTGCTTGGTTCGTCAAT+GGG - chr8_3:22897169-22897188 None:intergenic 50.0%
! ATCAGTCCTAGGACTGGCAT+CGG - chr8_3:22897288-22897307 None:intergenic 50.0%
CACCGATGACAAGAATCAGC+GGG + chr8_3:22897325-22897344 Msa1282440:CDS 50.0%
!! CACCCGCTGATTCTTGTCAT+CGG - chr8_3:22897330-22897349 None:intergenic 50.0%
!! ATTTTAACATGAGGGGGGGG+GGG + chr8_3:22898258-22898277 Msa1282440:intron 50.0%
GCTGAAGCTCTTGCTCTAGT+TGG - chr8_3:22898835-22898854 None:intergenic 50.0%
CTTCGCAGCTGAGAGAAGAA+AGG + chr8_3:22899445-22899464 Msa1282440:intron 50.0%
TGCAGAATATGCAAGGTGGC+TGG + chr8_3:22899612-22899631 Msa1282440:CDS 50.0%
!! GCTGAAAGGTGTTGCAGCTA+AGG + chr8_3:22899750-22899769 Msa1282440:CDS 50.0%
GTGAGGTCCTCTCTATACAC+CGG + chr8_3:22900147-22900166 Msa1282440:intron 50.0%
ACAAAATCTCCCGCTCTTCG+GGG - chr8_3:22900614-22900633 None:intergenic 50.0%
GAACTTTCTTTGGCGTGGCA+TGG + chr8_3:22900691-22900710 Msa1282440:intron 50.0%
TTTCTTTGGCGTGGCATGGT+GGG + chr8_3:22900695-22900714 Msa1282440:intron 50.0%
ATCAACTGCTGCTCAGTGAG+AGG - chr8_3:22900914-22900933 None:intergenic 50.0%
TCTCACTGAGCAGCAGTTGA+TGG + chr8_3:22900913-22900932 Msa1282440:CDS 50.0%
CTCACTGAGCAGCAGTTGAT+GGG + chr8_3:22900914-22900933 Msa1282440:CDS 50.0%
! TGCATCTTCTGCTTGTTGGG+AGG - chr8_3:22900960-22900979 None:intergenic 50.0%
AGTGGACAACGTCTCTGCAA+GGG - chr8_3:22901014-22901033 None:intergenic 50.0%
! ACCTTCCTCATCTGGTTCCT+CGG + chr8_3:22901039-22901058 Msa1282440:CDS 50.0%
! GTAATTTGCCACATTCCCCG+AGG - chr8_3:22901059-22901078 None:intergenic 50.0%
GGTCAAATGGCTATGGCCAT+GGG + chr8_3:22901082-22901101 Msa1282440:CDS 50.0%
GCTATGGCCATGGGTAAACT+TGG + chr8_3:22901091-22901110 Msa1282440:CDS 50.0%
GGGTAAACTTGGAACACTCG+AGG + chr8_3:22901102-22901121 Msa1282440:CDS 50.0%
GAACACTCGAGGGCTTCATT+CGG + chr8_3:22901113-22901132 Msa1282440:CDS 50.0%
!! GTGATGGTGGGAGTGTTGCA+TGG + chr8_3:22895031-22895050 Msa1282440:exon 55.0%
! GGCAGAGCGGTTTTGCATAG+AGG - chr8_3:22895622-22895641 None:intergenic 55.0%
AGCCTCACTCTAACCACCCA+AGG - chr8_3:22895764-22895783 None:intergenic 55.0%
! GGCTCTGCTTGGTTCGTCAA+TGG - chr8_3:22897170-22897189 None:intergenic 55.0%
CGAACCAAGCAGAGCCACAT+AGG + chr8_3:22897174-22897193 Msa1282440:CDS 55.0%
! GCAACCTATGTGGCTCTGCT+TGG - chr8_3:22897181-22897200 None:intergenic 55.0%
CGGCCATGGCAAATTCTTCC+TGG - chr8_3:22897268-22897287 None:intergenic 55.0%
GTCAGAACCCGCAACAGCAA+GGG - chr8_3:22897804-22897823 None:intergenic 55.0%
AGTCAGAACCCGCAACAGCA+AGG - chr8_3:22897805-22897824 None:intergenic 55.0%
! TTTTAACATGAGGGGGGGGG+GGG + chr8_3:22898259-22898278 Msa1282440:intron 55.0%
GCGCCGAGGAACATGTACTA+GGG - chr8_3:22900582-22900601 None:intergenic 55.0%
! AGCGCCGAGGAACATGTACT+AGG - chr8_3:22900583-22900602 None:intergenic 55.0%
! TACATGTTCCTCGGCGCTGA+GGG + chr8_3:22900585-22900604 Msa1282440:intron 55.0%
CTTTCTTTGGCGTGGCATGG+TGG + chr8_3:22900694-22900713 Msa1282440:intron 55.0%
CAGTGGACAACGTCTCTGCA+AGG - chr8_3:22901015-22901034 None:intergenic 55.0%
CTTGCAGAGACGTTGTCCAC+TGG + chr8_3:22901013-22901032 Msa1282440:CDS 55.0%
! AGATGAGGAAGGTGCACCAG+TGG - chr8_3:22901032-22901051 None:intergenic 55.0%
ACTGGTGCACCTTCCTCATC+TGG + chr8_3:22901031-22901050 Msa1282440:CDS 55.0%
! CCTTCCTCATCTGGTTCCTC+GGG + chr8_3:22901040-22901059 Msa1282440:CDS 55.0%
! CTTCCTCATCTGGTTCCTCG+GGG + chr8_3:22901041-22901060 Msa1282440:CDS 55.0%
ATTCCCCGAGGAACCAGATG+AGG - chr8_3:22901047-22901066 None:intergenic 55.0%
! ATCTGGTTCCTCGGGGAATG+TGG + chr8_3:22901048-22901067 Msa1282440:CDS 55.0%
GGGTCAAATGGCTATGGCCA+TGG + chr8_3:22901081-22901100 Msa1282440:CDS 55.0%
GAACTGGTGTGAACAGGGCC+AGG - chr8_3:22897002-22897021 None:intergenic 60.0%
CACGATTCTGAGCGAGCCTG+CGG - chr8_3:22897966-22897985 None:intergenic 60.0%
CAGGCTCGCTCAGAATCGTG+AGG + chr8_3:22897966-22897985 Msa1282440:CDS 60.0%
GCTCGCTCAGAATCGTGAGG+CGG + chr8_3:22897969-22897988 Msa1282440:CDS 60.0%
AGCAAGAGCTTCAGCGAGCC+AGG + chr8_3:22898840-22898859 Msa1282440:CDS 60.0%
AGGGGCTCCGGTGTATAGAG+AGG - chr8_3:22900157-22900176 None:intergenic 60.0%
GTACATGTTCCTCGGCGCTG+AGG + chr8_3:22900584-22900603 Msa1282440:intron 60.0%
CCCGAGGAACCAGATGAGGA+AGG - chr8_3:22901043-22901062 None:intergenic 60.0%
ACTCGAGGGCTTCATTCGGC+AGG + chr8_3:22901117-22901136 Msa1282440:CDS 60.0%
CGCTCTCAGCTCTCTCTGGT+TGG + chr8_3:22901510-22901529 Msa1282440:CDS 60.0%
!! CCTAGGACTGGCATCGGCCA+TGG - chr8_3:22897282-22897301 None:intergenic 65.0%
CCATGGCCGATGCCAGTCCT+AGG + chr8_3:22897279-22897298 Msa1282440:CDS 65.0%
GCTTCAGCGAGCCAGGCAAC+AGG + chr8_3:22898847-22898866 Msa1282440:CDS 65.0%
!! CTGAGGGCATCCCCGAAGAG+CGG + chr8_3:22900601-22900620 Msa1282440:intron 65.0%
!! TGAGGGCATCCCCGAAGAGC+GGG + chr8_3:22900602-22900621 Msa1282440:intron 65.0%
TGCGCGCTCTCAGCTCTCTC+TGG + chr8_3:22901506-22901525 Msa1282440:CDS 65.0%
!! TGAGGGGGGGGGGGGTGCTT+AGG + chr8_3:22898267-22898286 Msa1282440:intron 75.0%
! CGGGGATGCCCTCAGCGCCG+AGG - chr8_3:22900596-22900615 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 22894091 22901866 22894091 ID=Msa1282440;Name=Msa1282440
chr8_3 mRNA 22894091 22901866 22894091 ID=Msa1282440-mRNA-1;Parent=Msa1282440;Name=Msa1282440-mRNA-1;_AED=0.14;_eAED=0.14;_QI=250|0.90|0.91|1|0.90|0.83|12|317|456
chr8_3 exon 22894091 22894273 22894091 ID=Msa1282440-mRNA-1:exon:8166;Parent=Msa1282440-mRNA-1
chr8_3 exon 22894983 22895132 22894983 ID=Msa1282440-mRNA-1:exon:8167;Parent=Msa1282440-mRNA-1
chr8_3 exon 22896259 22896356 22896259 ID=Msa1282440-mRNA-1:exon:8168;Parent=Msa1282440-mRNA-1
chr8_3 exon 22896949 22897031 22896949 ID=Msa1282440-mRNA-1:exon:8169;Parent=Msa1282440-mRNA-1
chr8_3 exon 22897143 22897346 22897143 ID=Msa1282440-mRNA-1:exon:8170;Parent=Msa1282440-mRNA-1
chr8_3 exon 22897785 22897859 22897785 ID=Msa1282440-mRNA-1:exon:8171;Parent=Msa1282440-mRNA-1
chr8_3 exon 22897958 22898017 22897958 ID=Msa1282440-mRNA-1:exon:8172;Parent=Msa1282440-mRNA-1
chr8_3 exon 22898791 22898868 22898791 ID=Msa1282440-mRNA-1:exon:8173;Parent=Msa1282440-mRNA-1
chr8_3 exon 22899010 22899031 22899010 ID=Msa1282440-mRNA-1:exon:8174;Parent=Msa1282440-mRNA-1
chr8_3 exon 22899596 22899867 22899596 ID=Msa1282440-mRNA-1:exon:8175;Parent=Msa1282440-mRNA-1
chr8_3 exon 22900890 22901138 22900890 ID=Msa1282440-mRNA-1:exon:8176;Parent=Msa1282440-mRNA-1
chr8_3 exon 22901403 22901866 22901403 ID=Msa1282440-mRNA-1:exon:8177;Parent=Msa1282440-mRNA-1
chr8_3 five_prime_UTR 22894091 22894273 22894091 ID=Msa1282440-mRNA-1:five_prime_utr;Parent=Msa1282440-mRNA-1
chr8_3 five_prime_UTR 22894983 22895049 22894983 ID=Msa1282440-mRNA-1:five_prime_utr;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22895050 22895132 22895050 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22896259 22896356 22896259 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22896949 22897031 22896949 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22897143 22897346 22897143 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22897785 22897859 22897785 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22897958 22898017 22897958 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22898791 22898868 22898791 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22899010 22899031 22899010 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22899596 22899867 22899596 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22900890 22901138 22900890 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 CDS 22901403 22901549 22901403 ID=Msa1282440-mRNA-1:cds;Parent=Msa1282440-mRNA-1
chr8_3 three_prime_UTR 22901550 22901866 22901550 ID=Msa1282440-mRNA-1:three_prime_utr;Parent=Msa1282440-mRNA-1
Gene Sequence

>Msa1282440

ATGGGAAGTAGAATCAGAGTTGGTGTTGAAGATGAGAAGGGAGCAGAAAGAGGGATGCCGAGCTTCAATTCCGACGATGCATGCTATACAGATGGGAACACAATTGATAATTTTCATGTTTCTGACTTTGGAGCATTTAGTCAACCATATCGCTTAGAGGATGCTGTTGTTCTGAGTGGAAATTCAAACTCGGTTTTTAACTCACTTAAAGTAAGTGGCCAAACAATTTCTCCTGGCCCTGTTCACACCAGTTCTCTTGATAAGTTGCCAACATCACGTGATAAAAGCCCATTGACGAACCAAGCAGAGCCACATAGGTTGCAATTAACAAAGCTTCAATCATCAAATCCAGGTAGCGGTACCATATTAAGTGTTCATACAGAAAACCAGGAAGAATTTGCCATGGCCGATGCCAGTCCTAGGACTGATATTTCGACAGATGGAGACACCGATGACAAGAATCAGCGGTTTGATAGAAATCAATCCCTTGCTGTTGCGGGTTCTGACTCCAGTGACAGATCAAAGGATAAATCAGATCAGAAGACTCTCCGCAGGCTCGCTCAGAATCGTGAGGCGGCAAGAAAAAGCCGATTGAGAAAGAAAGCCTATGTCCAACAATTGGAAAGTAGTCGTTTGAAGCTGACCCAACTAGAGCAAGAGCTTCAGCGAGCCAGGCAACAGGGAGTCTTCATATCAAGCTCGGGAGCAATGCAATTCGATGCAGAATATGCAAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAGCTGAGAGCAGCTGTAAATTCTCATGCAAGTGATACCGAACTTCGCATGATTGTTGATGGTGTAGTGGCACATTATGATGAGATTTTTAGGCTGAAAGGTGTTGCAGCTAAGGCTGATGTTTTCCATTTGTTGTCTGGCATGTGGAAAACACCTGCTGAAAGGTGTTTCTTATGGCTTGGTGGTTTTCGGTCATCTGAACTTCTCAAGCTTCTGGTAAATCAATTGGAACCTCTCACTGAGCAGCAGTTGATGGGTATTACCAACTTGCAACAATCCTCCCAACAAGCAGAAGATGCATTGTCTCAGGGTATGGAAGCATTACAACAGTCCCTTGCAGAGACGTTGTCCACTGGTGCACCTTCCTCATCTGGTTCCTCGGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAACTTGGAACACTCGAGGGCTTCATTCGGCAGGCTGACAATCTGCGCCAGCAAACACTACAACAAATGCACCGAATATTGACAACACGACAATCGGCTCGTGCACTCCTTGCCATCCATGATTACTTTTCACGGCTGCGCGCTCTCAGCTCTCTCTGGTTGGCTCGTCCAAGAGATTAA
Protein sequence

>Msa1282440

MGSRIRVGVEDEKGAERGMPSFNSDDACYTDGNTIDNFHVSDFGAFSQPYRLEDAVVLSGNSNSVFNSLKVSGQTISPGPVHTSSLDKLPTSRDKSPLTNQAEPHRLQLTKLQSSNPGSGTILSVHTENQEEFAMADASPRTDISTDGDTDDKNQRFDRNQSLAVAGSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGVFISSSGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGVVAHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPSSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD*