Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238660 | XP_003627627.1 | 81.746 | 126 | 23 | 0 | 135 | 260 | 23 | 148 | 5.08e-70 | 222 |
| Msa1238660 | XP_003627627.1 | 88.356 | 146 | 6 | 1 | 1 | 135 | 1 | 146 | 6.71e-85 | 260 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238660 | sp|Q0JBH9|ERG3_ORYSJ | 51.034 | 145 | 59 | 2 | 1 | 134 | 1 | 144 | 1.63e-45 | 152 |
| Msa1238660 | sp|Q0JBH9|ERG3_ORYSJ | 52.066 | 121 | 57 | 1 | 137 | 257 | 25 | 144 | 1.68e-39 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1238660 | 0.803004 | 4.287576e-49 | -8.615850e-47 |
| Msa0005380 | Msa1238660 | 0.839336 | 1.684539e-57 | -8.615850e-47 |
| Msa0009640 | Msa1238660 | 0.815624 | 8.402737e-52 | -8.615850e-47 |
| Msa0028620 | Msa1238660 | 0.810576 | 1.076256e-50 | -8.615850e-47 |
| Msa0030700 | Msa1238660 | 0.837719 | 4.402944e-57 | -8.615850e-47 |
| Msa0038290 | Msa1238660 | -0.805664 | 1.197014e-49 | -8.615850e-47 |
| Msa0060670 | Msa1238660 | 0.801603 | 8.329563e-49 | -8.615850e-47 |
| Msa0075160 | Msa1238660 | -0.817440 | 3.293534e-52 | -8.615850e-47 |
| Msa0078120 | Msa1238660 | 0.826868 | 2.141835e-54 | -8.615850e-47 |
| Msa0081020 | Msa1238660 | 0.816167 | 6.358192e-52 | -8.615850e-47 |
| Msa0095940 | Msa1238660 | 0.800216 | 1.599290e-48 | -8.615850e-47 |
| Msa0101250 | Msa1238660 | 0.800028 | 1.746047e-48 | -8.615850e-47 |
| Msa0105410 | Msa1238660 | 0.850287 | 1.871752e-60 | -8.615850e-47 |
| Msa0108410 | Msa1238660 | 0.805238 | 1.470145e-49 | -8.615850e-47 |
| Msa0613420 | Msa1238660 | 0.814478 | 1.509438e-51 | -8.615850e-47 |
| Msa0635270 | Msa1238660 | 0.801537 | 8.591902e-49 | -8.615850e-47 |
| Msa0641130 | Msa1238660 | 0.828864 | 7.091972e-55 | -8.615850e-47 |
| Msa0646240 | Msa1238660 | 0.832476 | 9.248615e-56 | -8.615850e-47 |
| Msa0659420 | Msa1238660 | 0.803193 | 3.918522e-49 | -8.615850e-47 |
| Msa0702720 | Msa1238660 | 0.834257 | 3.328459e-56 | -8.615850e-47 |
| Msa0733010 | Msa1238660 | 0.853530 | 2.248380e-61 | -8.615850e-47 |
| Msa0743930 | Msa1238660 | 0.841178 | 5.563783e-58 | -8.615850e-47 |
| Msa0773990 | Msa1238660 | 0.828385 | 9.260899e-55 | -8.615850e-47 |
| Msa0778570 | Msa1238660 | 0.804991 | 1.655820e-49 | -8.615850e-47 |
| Msa0787870 | Msa1238660 | 0.811853 | 5.686941e-51 | -8.615850e-47 |
| Msa0814600 | Msa1238660 | 0.807212 | 5.643462e-50 | -8.615850e-47 |
| Msa0816130 | Msa1238660 | 0.812940 | 3.291969e-51 | -8.615850e-47 |
| Msa0823540 | Msa1238660 | 0.801385 | 9.231023e-49 | -8.615850e-47 |
| Msa0828950 | Msa1238660 | 0.800942 | 1.137604e-48 | -8.615850e-47 |
| Msa0833270 | Msa1238660 | 0.805525 | 1.280069e-49 | -8.615850e-47 |
| Msa0833530 | Msa1238660 | 0.811282 | 7.566817e-51 | -8.615850e-47 |
| Msa0123000 | Msa1238660 | -0.810629 | 1.048137e-50 | -8.615850e-47 |
| Msa0124320 | Msa1238660 | 0.802822 | 4.674449e-49 | -8.615850e-47 |
| Msa0152850 | Msa1238660 | 0.808235 | 3.421192e-50 | -8.615850e-47 |
| Msa0168310 | Msa1238660 | 0.806489 | 8.025889e-50 | -8.615850e-47 |
| Msa0168410 | Msa1238660 | -0.815948 | 7.116678e-52 | -8.615850e-47 |
| Msa0187540 | Msa1238660 | 0.835335 | 1.781889e-56 | -8.615850e-47 |
| Msa0189600 | Msa1238660 | 0.803526 | 3.341833e-49 | -8.615850e-47 |
| Msa0189710 | Msa1238660 | 0.808807 | 2.582439e-50 | -8.615850e-47 |
| Msa0206450 | Msa1238660 | 0.805631 | 1.216112e-49 | -8.615850e-47 |
| Msa0217060 | Msa1238660 | 0.816379 | 5.700367e-52 | -8.615850e-47 |
| Msa0220400 | Msa1238660 | -0.832865 | 7.407471e-56 | -8.615850e-47 |
| Msa0222150 | Msa1238660 | 0.802801 | 4.722119e-49 | -8.615850e-47 |
| Msa0232020 | Msa1238660 | 0.811293 | 7.528817e-51 | -8.615850e-47 |
| Msa0232090 | Msa1238660 | 0.811504 | 6.772978e-51 | -8.615850e-47 |
| Msa0235290 | Msa1238660 | 0.809376 | 1.950852e-50 | -8.615850e-47 |
| Msa1225860 | Msa1238660 | -0.815913 | 7.246816e-52 | -8.615850e-47 |
| Msa1232700 | Msa1238660 | 0.810551 | 1.089829e-50 | -8.615850e-47 |
| Msa1236440 | Msa1238660 | 0.808590 | 2.874705e-50 | -8.615850e-47 |
| Msa1238600 | Msa1238660 | 0.923073 | 4.289019e-89 | -8.615850e-47 |
| Msa1238660 | Msa1245440 | 0.809896 | 1.508636e-50 | -8.615850e-47 |
| Msa1238660 | Msa1255210 | 0.813564 | 2.400916e-51 | -8.615850e-47 |
| Msa1238660 | Msa1256060 | 0.837360 | 5.441342e-57 | -8.615850e-47 |
| Msa1238660 | Msa1271130 | 0.821617 | 3.670766e-53 | -8.615850e-47 |
| Msa1238660 | Msa1275600 | 0.802230 | 6.192004e-49 | -8.615850e-47 |
| Msa1238660 | Msa1277670 | 0.802032 | 6.799031e-49 | -8.615850e-47 |
| Msa1238660 | Msa1289050 | 0.818362 | 2.039469e-52 | -8.615850e-47 |
| Msa1238660 | Msa1289090 | 0.824570 | 7.513265e-54 | -8.615850e-47 |
| Msa1238660 | Msa1295650 | 0.802537 | 5.352245e-49 | -8.615850e-47 |
| Msa1238660 | Msa1299400 | -0.803755 | 2.995537e-49 | -8.615850e-47 |
| Msa1238660 | Msa1306960 | 0.802559 | 5.298037e-49 | -8.615850e-47 |
| Msa1238660 | Msa1319560 | 0.980611 | 1.279674e-150 | -8.615850e-47 |
| Msa1238660 | Msa1325410 | -0.836928 | 7.018517e-57 | -8.615850e-47 |
| Msa1238660 | Msa1330920 | 0.805777 | 1.133198e-49 | -8.615850e-47 |
| Msa1238660 | Msa1340200 | 0.808380 | 3.187356e-50 | -8.615850e-47 |
| Msa1238660 | Msa1341840 | 0.850982 | 1.193697e-60 | -8.615850e-47 |
| Msa1238660 | Msa1358500 | 0.810080 | 1.377171e-50 | -8.615850e-47 |
| Msa1238660 | Msa1364350 | -0.809378 | 1.949039e-50 | -8.615850e-47 |
| Msa1238660 | Msa1380220 | 0.813381 | 2.634790e-51 | -8.615850e-47 |
| Msa1238660 | Msa1386890 | 0.805189 | 1.505440e-49 | -8.615850e-47 |
| Msa1238660 | Msa1407760 | 0.800176 | 1.629780e-48 | -8.615850e-47 |
| Msa1238660 | Msa1437730 | 0.807143 | 5.836084e-50 | -8.615850e-47 |
| Msa1238660 | Msa1442920 | 0.846182 | 2.550535e-59 | -8.615850e-47 |
| Msa1238660 | Msa1452710 | 0.828674 | 7.882906e-55 | -8.615850e-47 |
| Msa1238660 | Msa1458680 | 0.854696 | 1.036088e-61 | -8.615850e-47 |
| Msa1238660 | Msa1461370 | 0.826765 | 2.267027e-54 | -8.615850e-47 |
| Msa0365210 | Msa1238660 | 0.819945 | 8.894991e-53 | -8.615850e-47 |
| Msa0372300 | Msa1238660 | 0.819703 | 1.010538e-52 | -8.615850e-47 |
| Msa0374870 | Msa1238660 | 0.806986 | 6.302496e-50 | -8.615850e-47 |
| Msa0374890 | Msa1238660 | 0.803746 | 3.008890e-49 | -8.615850e-47 |
| Msa0375330 | Msa1238660 | -0.802131 | 6.490002e-49 | -8.615850e-47 |
| Msa0403640 | Msa1238660 | 0.806442 | 8.211102e-50 | -8.615850e-47 |
| Msa0420610 | Msa1238660 | 0.805052 | 1.608330e-49 | -8.615850e-47 |
| Msa0423550 | Msa1238660 | 0.804489 | 2.108414e-49 | -8.615850e-47 |
| Msa0450400 | Msa1238660 | -0.809135 | 2.197547e-50 | -8.615850e-47 |
| Msa0465500 | Msa1238660 | 0.811018 | 8.634997e-51 | -8.615850e-47 |
| Msa0465820 | Msa1238660 | 0.809281 | 2.044962e-50 | -8.615850e-47 |
| Msa0470880 | Msa1238660 | 0.817425 | 3.319405e-52 | -8.615850e-47 |
| Msa0481630 | Msa1238660 | 0.845624 | 3.616169e-59 | -8.615850e-47 |
| Msa0993190 | Msa1238660 | 0.804694 | 1.910092e-49 | -8.615850e-47 |
| Msa0999680 | Msa1238660 | 0.821682 | 3.546886e-53 | -8.615850e-47 |
| Msa1012710 | Msa1238660 | 0.802776 | 4.778195e-49 | -8.615850e-47 |
| Msa1026480 | Msa1238660 | 0.807654 | 4.548783e-50 | -8.615850e-47 |
| Msa1030810 | Msa1238660 | 0.818700 | 1.709161e-52 | -8.615850e-47 |
| Msa1048220 | Msa1238660 | 0.810224 | 1.281647e-50 | -8.615850e-47 |
| Msa1068600 | Msa1238660 | 0.832637 | 8.438532e-56 | -8.615850e-47 |
| Msa1069890 | Msa1238660 | 0.816603 | 5.078183e-52 | -8.615850e-47 |
| Msa1092310 | Msa1238660 | 0.805681 | 1.186854e-49 | -8.615850e-47 |
| Msa0244640 | Msa1238660 | 0.808783 | 2.613840e-50 | -8.615850e-47 |
| Msa0256920 | Msa1238660 | 0.819577 | 1.079388e-52 | -8.615850e-47 |
| Msa0271540 | Msa1238660 | 0.813803 | 2.127822e-51 | -8.615850e-47 |
| Msa0282780 | Msa1238660 | 0.801178 | 1.017591e-48 | -8.615850e-47 |
| Msa0282960 | Msa1238660 | 0.802483 | 5.492300e-49 | -8.615850e-47 |
| Msa0287870 | Msa1238660 | 0.854359 | 1.297417e-61 | -8.615850e-47 |
| Msa0296870 | Msa1238660 | 0.815975 | 7.017688e-52 | -8.615850e-47 |
| Msa0299530 | Msa1238660 | -0.800426 | 1.449013e-48 | -8.615850e-47 |
| Msa0308470 | Msa1238660 | 0.800020 | 1.753160e-48 | -8.615850e-47 |
| Msa0310090 | Msa1238660 | 0.802743 | 4.854151e-49 | -8.615850e-47 |
| Msa0319270 | Msa1238660 | 0.805763 | 1.140648e-49 | -8.615850e-47 |
| Msa0343210 | Msa1238660 | 0.817186 | 3.758232e-52 | -8.615850e-47 |
| Msa1114780 | Msa1238660 | 0.806450 | 8.179532e-50 | -8.615850e-47 |
| Msa1129330 | Msa1238660 | 0.852690 | 3.912256e-61 | -8.615850e-47 |
| Msa1132470 | Msa1238660 | 0.814135 | 1.797709e-51 | -8.615850e-47 |
| Msa1140540 | Msa1238660 | 0.813816 | 2.112970e-51 | -8.615850e-47 |
| Msa1150280 | Msa1238660 | 0.806446 | 8.194554e-50 | -8.615850e-47 |
| Msa1175100 | Msa1238660 | 0.809314 | 2.011370e-50 | -8.615850e-47 |
| Msa1184690 | Msa1238660 | 0.806787 | 6.942721e-50 | -8.615850e-47 |
| Msa1212050 | Msa1238660 | 0.813823 | 2.105687e-51 | -8.615850e-47 |
| Msa1213890 | Msa1238660 | 0.810957 | 8.901002e-51 | -8.615850e-47 |
| Msa1213980 | Msa1238660 | 0.847384 | 1.196924e-59 | -8.615850e-47 |
| Msa0511440 | Msa1238660 | 0.801581 | 8.414421e-49 | -8.615850e-47 |
| Msa0512630 | Msa1238660 | 0.810712 | 1.005797e-50 | -8.615850e-47 |
| Msa0530730 | Msa1238660 | 0.818130 | 2.301583e-52 | -8.615850e-47 |
| Msa0544490 | Msa1238660 | 0.821848 | 3.246391e-53 | -8.615850e-47 |
| Msa0545050 | Msa1238660 | 0.825617 | 4.251280e-54 | -8.615850e-47 |
| Msa0559650 | Msa1238660 | -0.800566 | 1.357006e-48 | -8.615850e-47 |
| Msa0570120 | Msa1238660 | 0.801655 | 8.129089e-49 | -8.615850e-47 |
| Msa0575320 | Msa1238660 | 0.846666 | 1.881629e-59 | -8.615850e-47 |
| Msa0583360 | Msa1238660 | -0.817729 | 2.835536e-52 | -8.615850e-47 |
| Msa0587120 | Msa1238660 | 0.840756 | 7.179092e-58 | -8.615850e-47 |
| Msa0600590 | Msa1238660 | 0.810537 | 1.097390e-50 | -8.615850e-47 |
| Msa0846860 | Msa1238660 | 0.819724 | 9.992224e-53 | -8.615850e-47 |
| Msa0855870 | Msa1238660 | 0.827586 | 1.441588e-54 | -8.615850e-47 |
| Msa0862620 | Msa1238660 | 0.806217 | 9.158567e-50 | -8.615850e-47 |
| Msa0867010 | Msa1238660 | 0.833413 | 5.411074e-56 | -8.615850e-47 |
| Msa0870510 | Msa1238660 | 0.831051 | 2.077536e-55 | -8.615850e-47 |
| Msa0878220 | Msa1238660 | 0.807256 | 5.524879e-50 | -8.615850e-47 |
| Msa0879930 | Msa1238660 | 0.824418 | 8.158215e-54 | -8.615850e-47 |
| Msa0881040 | Msa1238660 | 0.829518 | 4.921489e-55 | -8.615850e-47 |
| Msa0899970 | Msa1238660 | 0.813301 | 2.743907e-51 | -8.615850e-47 |
| Msa0930270 | Msa1238660 | 0.833711 | 4.557238e-56 | -8.615850e-47 |
| Msa0940910 | Msa1238660 | 0.808847 | 2.533262e-50 | -8.615850e-47 |
| Msa0943970 | Msa1238660 | 0.839332 | 1.688670e-57 | -8.615850e-47 |
| Msa0944020 | Msa1238660 | 0.819705 | 1.009337e-52 | -8.615850e-47 |
| Msa0965080 | Msa1238660 | 0.817637 | 2.974228e-52 | -8.615850e-47 |
| Msa0965290 | Msa1238660 | 0.823898 | 1.080843e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238660 | MtrunA17_Chr8g0350031 | 88.356 | 146 | 6 | 1 | 1 | 135 | 1 | 146 | 6.17e-89 | 260 |
| Msa1238660 | MtrunA17_Chr8g0350031 | 81.746 | 126 | 23 | 0 | 135 | 260 | 23 | 148 | 4.67e-74 | 222 |
| Msa1238660 | MtrunA17_Chr8g0350021 | 96.825 | 126 | 4 | 0 | 135 | 260 | 23 | 148 | 6.58e-87 | 255 |
| Msa1238660 | MtrunA17_Chr8g0350021 | 80.000 | 145 | 18 | 1 | 1 | 134 | 1 | 145 | 1.34e-80 | 239 |
| Msa1238660 | MtrunA17_Chr5g0435251 | 38.710 | 155 | 69 | 4 | 1 | 133 | 1 | 151 | 1.14e-31 | 114 |
| Msa1238660 | MtrunA17_Chr5g0435251 | 40.458 | 131 | 63 | 5 | 137 | 256 | 25 | 151 | 8.08e-26 | 99.4 |
| Msa1238660 | MtrunA17_Chr5g0435261 | 38.509 | 161 | 72 | 5 | 1 | 137 | 1 | 158 | 2.46e-28 | 105 |
| Msa1238660 | MtrunA17_Chr5g0435261 | 39.394 | 132 | 65 | 4 | 138 | 257 | 27 | 155 | 1.08e-25 | 99.0 |
| Msa1238660 | MtrunA17_Chr1g0147471 | 69.355 | 62 | 19 | 0 | 137 | 198 | 1 | 62 | 8.79e-28 | 101 |
| Msa1238660 | MtrunA17_Chr1g0147471 | 66.129 | 62 | 21 | 0 | 25 | 86 | 1 | 62 | 5.47e-26 | 97.1 |
| Msa1238660 | MtrunA17_Chr7g0246521 | 60.377 | 53 | 21 | 0 | 137 | 189 | 1 | 53 | 7.77e-19 | 78.2 |
| Msa1238660 | MtrunA17_Chr7g0246521 | 56.604 | 53 | 23 | 0 | 25 | 77 | 1 | 53 | 2.33e-17 | 74.3 |
| Msa1238660 | MtrunA17_Chr1g0199571 | 26.277 | 274 | 142 | 11 | 2 | 219 | 259 | 528 | 1.38e-15 | 75.9 |
| Msa1238660 | MtrunA17_Chr8g0348941 | 30.612 | 147 | 79 | 4 | 1 | 124 | 1 | 147 | 8.92e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238660 | AT1G63220.1 | 52.381 | 147 | 58 | 2 | 1 | 136 | 1 | 146 | 7.07e-45 | 148 |
| Msa1238660 | AT1G63220.1 | 53.226 | 124 | 57 | 1 | 137 | 260 | 25 | 147 | 3.91e-39 | 134 |
| Msa1238660 | AT1G63220.2 | 48.299 | 147 | 50 | 3 | 1 | 136 | 1 | 132 | 1.71e-36 | 126 |
| Msa1238660 | AT1G63220.2 | 52.252 | 111 | 52 | 1 | 150 | 260 | 24 | 133 | 7.46e-33 | 117 |
| Msa1238660 | AT3G55470.2 | 34.839 | 155 | 76 | 4 | 1 | 133 | 1 | 152 | 4.87e-21 | 87.0 |
| Msa1238660 | AT3G55470.2 | 29.851 | 134 | 80 | 5 | 137 | 259 | 25 | 155 | 1.22e-12 | 64.3 |
| Msa1238660 | AT3G55470.1 | 35.256 | 156 | 75 | 5 | 1 | 133 | 1 | 153 | 4.45e-20 | 84.7 |
| Msa1238660 | AT3G55470.1 | 30.370 | 135 | 79 | 6 | 137 | 259 | 25 | 156 | 9.43e-12 | 62.0 |
| Msa1238660 | AT5G04220.1 | 25.373 | 268 | 148 | 10 | 2 | 219 | 37 | 302 | 9.38e-15 | 73.2 |
| Msa1238660 | AT5G04220.3 | 25.373 | 268 | 148 | 10 | 2 | 219 | 197 | 462 | 2.97e-14 | 72.4 |
| Msa1238660 | AT5G04220.2 | 25.373 | 268 | 148 | 10 | 2 | 219 | 259 | 524 | 5.85e-14 | 71.6 |
| Msa1238660 | AT4G00467.2 | 29.104 | 134 | 73 | 3 | 1 | 112 | 1 | 134 | 2.11e-12 | 64.7 |
| Msa1238660 | AT4G00467.1 | 29.104 | 134 | 73 | 3 | 1 | 112 | 1 | 134 | 3.56e-12 | 64.3 |
| Msa1238660 | AT5G47710.1 | 41.379 | 87 | 49 | 2 | 2 | 88 | 4 | 88 | 8.36e-12 | 62.4 |
| Msa1238660 | AT5G47710.2 | 41.379 | 87 | 49 | 2 | 2 | 88 | 4 | 88 | 8.36e-12 | 62.4 |
| Msa1238660 | AT5G47710.3 | 41.379 | 87 | 49 | 2 | 2 | 88 | 4 | 88 | 8.36e-12 | 62.4 |
| Msa1238660 | AT5G47710.4 | 41.379 | 87 | 49 | 2 | 2 | 88 | 4 | 88 | 8.36e-12 | 62.4 |
Find 62 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGCATCTTTCTTTGATTT+TGG | 0.121617 | 8_2:+19232688 | None:intergenic |
| TATAATAATGATGATAATAT+TGG | 0.281672 | 8_2:-19231960 | Msa1238660:CDS |
| GTTTGGATACAAATTCTAAA+TGG | 0.283341 | 8_2:+19232718 | None:intergenic |
| CATCCATGTAATTCTTGATT+TGG | 0.286987 | 8_2:+19226381 | None:intergenic |
| AGAATATTGTGGAGAGATTA+AGG | 0.301540 | 8_2:-19231408 | Msa1238660:CDS |
| CTTATGTGATCCTCACTTAC+AGG | 0.307271 | 8_2:-19227289 | Msa1238660:CDS |
| TGAGCTCAATCTAAAGATAA+TGG | 0.346296 | 8_2:-19227076 | Msa1238660:CDS |
| TGAGCTGAATCTAAAGATAA+TGG | 0.346296 | 8_2:-19231994 | Msa1238660:CDS |
| GCTCCTGTGCACTGTAACTA+AGG | 0.366774 | 8_2:+19232194 | None:intergenic |
| ACAAGTTTGTAAGAATTCTC+TGG | 0.370783 | 8_2:+19226653 | None:intergenic |
| AAAATATTGTGGAGAGGTTA+AGG | 0.388006 | 8_2:-19226621 | Msa1238660:CDS |
| ACAAGATTGTATGAATTCTC+TGG | 0.390251 | 8_2:+19231440 | None:intergenic |
| TATAGTGCAGATGATAATCT+TGG | 0.427029 | 8_2:-19227042 | Msa1238660:CDS |
| AATGATGGATATTTACATAT+CGG | 0.437759 | 8_2:-19226404 | Msa1238660:three_prime_UTR |
| GTTTCTTAAAGTTGAAGTAA+AGG | 0.443076 | 8_2:+19232784 | None:intergenic |
| GTTGAATTATTGACCAGAAA+AGG | 0.443412 | 8_2:+19232806 | None:intergenic |
| ATAACATAGTTTATGTCAAA+AGG | 0.450984 | 8_2:+19226277 | None:intergenic |
| GAAATGTCTCGTTCCATTGA+GGG | 0.455490 | 8_2:+19227124 | None:intergenic |
| GAAAAGTCTCATTCCATTGT+GGG | 0.465952 | 8_2:+19232042 | None:intergenic |
| CGGCCAAATCAAGAATTACA+TGG | 0.484667 | 8_2:-19226384 | Msa1238660:three_prime_UTR |
| CAATCTAAAGATAATGGAAA+AGG | 0.492449 | 8_2:-19227070 | Msa1238660:CDS |
| GAATCTAAAGATAATGGAAA+AGG | 0.493781 | 8_2:-19231988 | Msa1238660:CDS |
| TCTTGAATCACTGTCTCTAA+AGG | 0.495815 | 8_2:+19226686 | None:intergenic |
| GTGCTGGATCCAACCCTCAA+TGG | 0.515422 | 8_2:-19227137 | Msa1238660:CDS |
| AGAAATGTCTCGTTCCATTG+AGG | 0.518131 | 8_2:+19227123 | None:intergenic |
| AAGAGGAGGAGACTGGTGGA+TGG | 0.524498 | 8_2:-19231237 | Msa1238660:CDS |
| GGGACTATTGAAGTGAATGA+TGG | 0.534532 | 8_2:-19226419 | Msa1238660:exon |
| TACAATGAAGAGGAGGAGAC+TGG | 0.545609 | 8_2:-19231244 | Msa1238660:CDS |
| CTGTAAGTGAGGATCACATA+AGG | 0.549620 | 8_2:+19227290 | None:intergenic |
| GTGGATGGAAACAATCGGCT+AGG | 0.550623 | 8_2:-19226440 | Msa1238660:CDS |
| CACAAGAGTGCTGTTCAAGA+AGG | 0.553199 | 8_2:-19232172 | Msa1238660:intron |
| AGAAAAGTCTCATTCCATTG+TGG | 0.555092 | 8_2:+19232041 | None:intergenic |
| TACAATCAAGAGGAGGAGAC+TGG | 0.557679 | 8_2:-19226462 | Msa1238660:CDS |
| AAGAGGAGGAGACTGGTGGA+TGG | 0.563015 | 8_2:-19226455 | Msa1238660:CDS |
| GACTGGTGGATGGAAACAAT+CGG | 0.565129 | 8_2:-19226445 | Msa1238660:CDS |
| CTGTAACTAAGGATCACATA+AGG | 0.576082 | 8_2:+19232205 | None:intergenic |
| CACAAGAGTACTGTGCAAGA+AGG | 0.586322 | 8_2:-19227257 | Msa1238660:intron |
| GATCCTTAGTTACAGTGCAC+AGG | 0.590583 | 8_2:-19232197 | Msa1238660:CDS |
| TGTCTCGTTCCATTGAGGGT+TGG | 0.592028 | 8_2:+19227128 | None:intergenic |
| GTGAAGGATGAAGAATATTG+TGG | 0.592520 | 8_2:-19231419 | Msa1238660:CDS |
| GCTCCTGTGCCCTGTAAGTG+AGG | 0.593685 | 8_2:+19227279 | None:intergenic |
| GAATTCTTACAAACTTGTGA+AGG | 0.595780 | 8_2:-19226648 | Msa1238660:CDS |
| TGGATGGAAACAATCGGCTA+GGG | 0.602214 | 8_2:-19226439 | Msa1238660:CDS |
| TGATCAGAGTTACAATGAAG+AGG | 0.605643 | 8_2:-19231254 | Msa1238660:CDS |
| GATCCTCACTTACAGGGCAC+AGG | 0.607717 | 8_2:-19227282 | Msa1238660:CDS |
| TCAGAGTTACAATGAAGAGG+AGG | 0.621822 | 8_2:-19231251 | Msa1238660:CDS |
| AATCAAGAGGAGGAGACTGG+TGG | 0.628097 | 8_2:-19226459 | Msa1238660:CDS |
| TTTAGAGACAGTGATTCAAG+AGG | 0.636421 | 8_2:-19226684 | Msa1238660:CDS |
| TGAACGGAGTTACAATCAAG+AGG | 0.638924 | 8_2:-19226472 | Msa1238660:CDS |
| TTATGTGATCCTCACTTACA+GGG | 0.640482 | 8_2:-19227288 | Msa1238660:CDS |
| TTAGAGACAGTGATTCAAGA+GGG | 0.640617 | 8_2:-19226683 | Msa1238660:CDS |
| AATGAAGAGGAGGAGACTGG+TGG | 0.640663 | 8_2:-19231241 | Msa1238660:CDS |
| TGGGGATCGATGTGATTGTG+AGG | 0.641837 | 8_2:-19226192 | None:intergenic |
| GAATTCATACAATCTTGTGA+AGG | 0.646669 | 8_2:-19231435 | Msa1238660:CDS |
| GATTGTATGAATTCTCTGGA+AGG | 0.649094 | 8_2:+19231444 | None:intergenic |
| AATCAAAGAAAGATGCCTCG+TGG | 0.675663 | 8_2:-19232684 | Msa1238660:exon |
| GGTTGCAGAGAAACTATGAA+CGG | 0.677708 | 8_2:-19226488 | Msa1238660:intron |
| GTGCTGGATCTAACCCACAA+TGG | 0.679425 | 8_2:-19232055 | Msa1238660:CDS |
| ATATTGTGGAGAGGTTAAGG+TGG | 0.690996 | 8_2:-19226618 | Msa1238660:CDS |
| ACGGAGTTACAATCAAGAGG+AGG | 0.705054 | 8_2:-19226469 | Msa1238660:CDS |
| ATATTGTGGAGAGATTAAGG+TGG | 0.788819 | 8_2:-19231405 | Msa1238660:CDS |
| ATAACTTCAAGAGTTCCACG+AGG | 0.830018 | 8_2:+19232669 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAATCAAATTATTTTTC+AGG | + | chr8_2:19226592-19226611 | None:intergenic | 10.0% |
| !! | TACAATTTAATTAGTTAAAT+TGG | + | chr8_2:19226799-19226818 | None:intergenic | 10.0% |
| !! | TATAATAATGATGATAATAT+TGG | - | chr8_2:19227119-19227138 | Msa1238660:CDS | 10.0% |
| !!! | TTTTTTTTTAGAACTAATTA+TGG | + | chr8_2:19227941-19227960 | None:intergenic | 10.0% |
| !!! | TTCTAAAAAAATTTAAAACT+TGG | + | chr8_2:19228929-19228948 | None:intergenic | 10.0% |
| !! | AACAACTAATAAAAAAAAAT+TGG | - | chr8_2:19229835-19229854 | Msa1238660:intron | 10.0% |
| !! | ATGAATGTAATTATTATATA+AGG | - | chr8_2:19230281-19230300 | Msa1238660:intron | 10.0% |
| !! | ATTTATATAAAATAAAATGG+TGG | - | chr8_2:19230739-19230758 | Msa1238660:intron | 10.0% |
| !!! | TTTTTTTTTGTTGAAAAAAA+GGG | + | chr8_2:19231663-19231682 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTGTTGAAAAAA+AGG | + | chr8_2:19231664-19231683 | None:intergenic | 10.0% |
| !!! | TAATTATTTTTTACTGATTC+AGG | - | chr8_2:19226250-19226269 | Msa1238660:three_prime_UTR | 15.0% |
| !!! | ATCTTTTTATGAATAATATC+AGG | - | chr8_2:19227002-19227021 | Msa1238660:intron | 15.0% |
| !!! | ATTGATAGTACATTTTAATA+GGG | + | chr8_2:19227785-19227804 | None:intergenic | 15.0% |
| !!! | AATTGATAGTACATTTTAAT+AGG | + | chr8_2:19227786-19227805 | None:intergenic | 15.0% |
| !! | TAAAATGTACTATCAATTAT+TGG | - | chr8_2:19227788-19227807 | Msa1238660:intron | 15.0% |
| !! | AAATTAATTCACAATTGATA+CGG | + | chr8_2:19228863-19228882 | None:intergenic | 15.0% |
| !!! | AATTGTGAATTAATTTTACA+AGG | - | chr8_2:19228867-19228886 | Msa1238660:intron | 15.0% |
| !!! | AATTATTCATAACACTTTTT+TGG | + | chr8_2:19230000-19230019 | None:intergenic | 15.0% |
| !! | TGTTATGAATAATTATGTTA+GGG | - | chr8_2:19230006-19230025 | Msa1238660:intron | 15.0% |
| !! | GTAAGTAATTAAAGTAATTA+AGG | + | chr8_2:19230095-19230114 | None:intergenic | 15.0% |
| !!! | ACATTTGTATTTTTATAAGA+AGG | - | chr8_2:19230402-19230421 | Msa1238660:intron | 15.0% |
| !!! | AGAGTTTTTTTTTTTTTTTG+AGG | + | chr8_2:19230547-19230566 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAAAACTCTC+TGG | - | chr8_2:19230548-19230567 | Msa1238660:intron | 15.0% |
| !!! | ATCTAAATTTTATTTATCCT+TGG | + | chr8_2:19230611-19230630 | None:intergenic | 15.0% |
| !! | GATAAAAATTATTCTAATTG+TGG | - | chr8_2:19230628-19230647 | Msa1238660:intron | 15.0% |
| !! | ATAATAGTATTAAATTGAGT+TGG | + | chr8_2:19230882-19230901 | None:intergenic | 15.0% |
| !!! | AACAATTTTAATAGTCAAAT+TGG | + | chr8_2:19231712-19231731 | None:intergenic | 15.0% |
| !!! | AAAGTTATAATTTGTAATGT+TGG | - | chr8_2:19232347-19232366 | Msa1238660:intron | 15.0% |
| !!! | ATTGATAGTACATTTTAAAA+GGG | + | chr8_2:19232567-19232586 | None:intergenic | 15.0% |
| !!! | AATTGATAGTACATTTTAAA+AGG | + | chr8_2:19232568-19232587 | None:intergenic | 15.0% |
| !! | TAAAATGTACTATCAATTAT+TGG | - | chr8_2:19227788-19227807 | Msa1238660:intron | 15.0% |
| !! | ATTATATATTCATGCTAAGT+TGG | - | chr8_2:19226622-19226641 | Msa1238660:CDS | 20.0% |
| !!! | TTTTTGCTTATATTTCATTC+TGG | + | chr8_2:19227271-19227290 | None:intergenic | 20.0% |
| !! | TGAAATATAAGCAAAAAAGT+AGG | - | chr8_2:19227274-19227293 | Msa1238660:CDS | 20.0% |
| !!! | ATAGTAGACTAAATTTTTAG+CGG | - | chr8_2:19227300-19227319 | Msa1238660:CDS | 20.0% |
| !! | GAATGAAATATAAACAAAAG+TGG | + | chr8_2:19227347-19227366 | None:intergenic | 20.0% |
| !!! | CTTTTGTTTATATTTCATTC+CGG | - | chr8_2:19227347-19227366 | Msa1238660:intron | 20.0% |
| !! | GTTTAAAAATTTACACCTAA+AGG | - | chr8_2:19227426-19227445 | Msa1238660:intron | 20.0% |
| !!! | AGTATATTTTGAGAACATTT+AGG | - | chr8_2:19227960-19227979 | Msa1238660:intron | 20.0% |
| !!! | ACTTTAATTATTGTGTTTTC+TGG | - | chr8_2:19227984-19228003 | Msa1238660:intron | 20.0% |
| !!! | GATATTTATTGAGTTTTCTT+GGG | + | chr8_2:19228127-19228146 | None:intergenic | 20.0% |
| !!! | AGATATTTATTGAGTTTTCT+TGG | + | chr8_2:19228128-19228147 | None:intergenic | 20.0% |
| !!! | TTTTTAGTCAATTAGTATAG+TGG | - | chr8_2:19228760-19228779 | Msa1238660:intron | 20.0% |
| !!! | AATACAACCATTTAATTTCA+TGG | - | chr8_2:19229461-19229480 | Msa1238660:intron | 20.0% |
| !! | TAGTTGAAATGTTACATTAA+AGG | - | chr8_2:19229672-19229691 | Msa1238660:intron | 20.0% |
| !! | GAATAAGTGTATTATGTAAA+AGG | - | chr8_2:19229897-19229916 | Msa1238660:intron | 20.0% |
| !!! | TCACTAGAAAAATTTTTCAT+TGG | - | chr8_2:19229939-19229958 | Msa1238660:intron | 20.0% |
| !!! | TTTCTAGTAAGATTTTAATG+AGG | - | chr8_2:19229967-19229986 | Msa1238660:intron | 20.0% |
| !! | GTGTTATGAATAATTATGTT+AGG | - | chr8_2:19230005-19230024 | Msa1238660:intron | 20.0% |
| !! | GTTATGAATAATTATGTTAG+GGG | - | chr8_2:19230007-19230026 | Msa1238660:intron | 20.0% |
| !!! | AACATATGAGTCTTATTTAT+AGG | + | chr8_2:19230133-19230152 | None:intergenic | 20.0% |
| !! | TATAAATAAGACTCATATGT+TGG | - | chr8_2:19230132-19230151 | Msa1238660:intron | 20.0% |
| !! | GAAACTAAAACTAAAGAATA+TGG | + | chr8_2:19230222-19230241 | None:intergenic | 20.0% |
| !!! | GGAGTAAGATTTTTATAAAA+GGG | + | chr8_2:19230244-19230263 | None:intergenic | 20.0% |
| !!! | TGGAGTAAGATTTTTATAAA+AGG | + | chr8_2:19230245-19230264 | None:intergenic | 20.0% |
| !! | ATTGATGAACTTCAATAAAT+CGG | + | chr8_2:19230674-19230693 | None:intergenic | 20.0% |
| !! | AATAATGACATAAGCTATTT+AGG | - | chr8_2:19230777-19230796 | Msa1238660:intron | 20.0% |
| !! | ATAATGACATAAGCTATTTA+GGG | - | chr8_2:19230778-19230797 | Msa1238660:intron | 20.0% |
| !! | ACATTTAAAAGGAAAAAAGT+TGG | - | chr8_2:19230849-19230868 | Msa1238660:intron | 20.0% |
| !!! | TATTATATATACACTGATTC+AGG | - | chr8_2:19230896-19230915 | Msa1238660:intron | 20.0% |
| !!! | TCTGGATTATTATTTCTAAA+AGG | + | chr8_2:19230949-19230968 | None:intergenic | 20.0% |
| !! | CTGATTTCAAAAATTCTAAA+TGG | + | chr8_2:19230987-19231006 | None:intergenic | 20.0% |
| !!! | GAAATTTTTTGATCTTAAGT+TGG | - | chr8_2:19231169-19231188 | Msa1238660:intron | 20.0% |
| !! | ATAATATGATAAAACCAAAC+CGG | + | chr8_2:19231509-19231528 | None:intergenic | 20.0% |
| !! | AAAACATAAAAACGAAAAAC+AGG | + | chr8_2:19231595-19231614 | None:intergenic | 20.0% |
| !! | ATTGTATCATGAATAATATC+AGG | - | chr8_2:19231920-19231939 | Msa1238660:intron | 20.0% |
| !! | TTGCAATATAAAAGTTCTTA+TGG | + | chr8_2:19232203-19232222 | None:intergenic | 20.0% |
| !!! | ATAAGAACTTTTATATTGCA+AGG | - | chr8_2:19232202-19232221 | Msa1238660:CDS | 20.0% |
| !!! | AATGATGGATATTTACATAT+CGG | - | chr8_2:19232675-19232694 | Msa1238660:CDS | 20.0% |
| !!! | ATTTTAATCTCTGTATTTTC+TGG | - | chr8_2:19232749-19232768 | Msa1238660:intron | 20.0% |
| !! | ATAACATAGTTTATGTCAAA+AGG | + | chr8_2:19232805-19232824 | None:intergenic | 20.0% |
| !!! | ATAAGCCATGTTATATTTTT+GGG | - | chr8_2:19232868-19232887 | Msa1238660:five_prime_UTR | 20.0% |
| ! | GTTTCTTAAAGTTGAAGTAA+AGG | + | chr8_2:19226298-19226317 | None:intergenic | 25.0% |
| ! | GTTTGGATACAAATTCTAAA+TGG | + | chr8_2:19226364-19226383 | None:intergenic | 25.0% |
| !!! | TTGATTTTGGAATTGTAGTT+TGG | + | chr8_2:19226381-19226400 | None:intergenic | 25.0% |
| ! | AAAATTGAAAGTCAAACTCT+TGG | + | chr8_2:19226549-19226568 | None:intergenic | 25.0% |
| !!! | TTTGTTATTTTGTTCTCTAG+TGG | - | chr8_2:19226968-19226987 | Msa1238660:intron | 25.0% |
| !!! | GAATCTAAAGATAATGGAAA+AGG | - | chr8_2:19227091-19227110 | Msa1238660:CDS | 25.0% |
| !! | TGTCTTTGATTCATCTTTTT+AGG | - | chr8_2:19227182-19227201 | Msa1238660:intron | 25.0% |
| ! | TAAAAATTTACACCTAAAGG+AGG | - | chr8_2:19227429-19227448 | Msa1238660:intron | 25.0% |
| ! | AAAAATTTACACCTAAAGGA+GGG | - | chr8_2:19227430-19227449 | Msa1238660:intron | 25.0% |
| !! | TAGTAATAGGTTGAACAAAA+TGG | + | chr8_2:19228155-19228174 | None:intergenic | 25.0% |
| !!! | ACAACCAAGGTTTTAAAAAA+CGG | - | chr8_2:19228174-19228193 | Msa1238660:intron | 25.0% |
| !! | TTTTGTTCACTCTGTAAAAA+CGG | + | chr8_2:19228261-19228280 | None:intergenic | 25.0% |
| ! | ACTTAAACTAGAGAAAGATT+TGG | + | chr8_2:19228462-19228481 | None:intergenic | 25.0% |
| ! | ATGAAATGACAATAGTCATT+AGG | - | chr8_2:19228951-19228970 | Msa1238660:intron | 25.0% |
| !!! | GTTTTTTTTTGGTGAAGAAA+CGG | + | chr8_2:19229224-19229243 | None:intergenic | 25.0% |
| ! | CCAAAAAAAAACTTATTGTG+CGG | - | chr8_2:19229232-19229251 | Msa1238660:intron | 25.0% |
| ! | ATGATCTCCATGAAATTAAA+TGG | + | chr8_2:19229471-19229490 | None:intergenic | 25.0% |
| !!! | ATTTGATGATGTTGCTATTA+TGG | + | chr8_2:19229506-19229525 | None:intergenic | 25.0% |
| ! | AACTATTCATTCACTAATTG+AGG | + | chr8_2:19230066-19230085 | None:intergenic | 25.0% |
| ! | ATTAGTGAATGAATAGTTAG+TGG | - | chr8_2:19230068-19230087 | Msa1238660:intron | 25.0% |
| ! | AAACTAACGTATGTTTATGT+TGG | + | chr8_2:19230445-19230464 | None:intergenic | 25.0% |
| !! | AATAAAATGGTGGAATGAAT+TGG | - | chr8_2:19230749-19230768 | Msa1238660:intron | 25.0% |
| ! | AAAGAGACTCAACATTTAAA+AGG | - | chr8_2:19230838-19230857 | Msa1238660:intron | 25.0% |
| !!! | AGTATTAAATTGAGTTGGAT+TGG | + | chr8_2:19230877-19230896 | None:intergenic | 25.0% |
| ! | AAAGAAAATCATTGTCTTCA+AGG | + | chr8_2:19231060-19231079 | None:intergenic | 25.0% |
| ! | TAAATTTCTGCATCAAACAA+TGG | - | chr8_2:19231107-19231126 | Msa1238660:intron | 25.0% |
| !! | ATCACAAGATTTCATACTTT+TGG | + | chr8_2:19231135-19231154 | None:intergenic | 25.0% |
| ! | GGAACAACAAATATATAGAT+CGG | + | chr8_2:19231196-19231215 | None:intergenic | 25.0% |
| ! | AGACTCAATTATCAATCTTT+AGG | + | chr8_2:19231217-19231236 | None:intergenic | 25.0% |
| ! | GATCTTTCAATATGAATCAA+AGG | + | chr8_2:19231416-19231435 | None:intergenic | 25.0% |
| ! | AATGTTGACAGCTAAATTAT+TGG | + | chr8_2:19231463-19231482 | None:intergenic | 25.0% |
| ! | TCGTTGTATGCTATTAAAAT+GGG | - | chr8_2:19231543-19231562 | Msa1238660:intron | 25.0% |
| ! | AACAAAGATCAAAACTTTAG+AGG | + | chr8_2:19231746-19231765 | None:intergenic | 25.0% |
| !!! | CAATCTAAAGATAATGGAAA+AGG | - | chr8_2:19232009-19232028 | Msa1238660:CDS | 25.0% |
| ! | TTAAATTGCAGTAAGAAAGT+TGG | + | chr8_2:19232232-19232251 | None:intergenic | 25.0% |
| !! | ATAACTGAAAAGTTGATTGT+TGG | - | chr8_2:19232253-19232272 | Msa1238660:intron | 25.0% |
| !! | ACTAGTTTACACTTAAAAGA+AGG | - | chr8_2:19232320-19232339 | Msa1238660:intron | 25.0% |
| ! | GAAGAAAAATAACAGAAAAC+AGG | + | chr8_2:19232522-19232541 | None:intergenic | 25.0% |
| !! | GATAAGCCATGTTATATTTT+TGG | - | chr8_2:19232867-19232886 | Msa1238660:five_prime_UTR | 25.0% |
| !!! | TAAGCCATGTTATATTTTTG+GGG | - | chr8_2:19232869-19232888 | Msa1238660:five_prime_UTR | 25.0% |
| GTTGAATTATTGACCAGAAA+AGG | + | chr8_2:19226276-19226295 | None:intergenic | 30.0% | |
| !!! | GTTATTTTGATCAGTGCTAA+AGG | - | chr8_2:19226428-19226447 | Msa1238660:exon | 30.0% |
| TCATGTATTGCATATGTTGA+TGG | - | chr8_2:19226483-19226502 | Msa1238660:CDS | 30.0% | |
| GAAATTTCTGCATGAAACAA+TGG | - | chr8_2:19226521-19226540 | Msa1238660:intron | 30.0% | |
| TTATGAATAATATCAGGTGC+TGG | - | chr8_2:19227008-19227027 | Msa1238660:intron | 30.0% | |
| TGAGCTGAATCTAAAGATAA+TGG | - | chr8_2:19227085-19227104 | Msa1238660:CDS | 30.0% | |
| TTGCTTATATTTCATTCTGG+AGG | + | chr8_2:19227268-19227287 | None:intergenic | 30.0% | |
| ACTTTAACACTTACTTTCTC+CGG | + | chr8_2:19227369-19227388 | None:intergenic | 30.0% | |
| GAGAAAGTAAGTGTTAAAGT+TGG | - | chr8_2:19227369-19227388 | Msa1238660:intron | 30.0% | |
| GTTGGATTCTCATTGAAAAT+TGG | - | chr8_2:19227387-19227406 | Msa1238660:intron | 30.0% | |
| GTTTGACTATGTAACTTCAA+AGG | + | chr8_2:19227520-19227539 | None:intergenic | 30.0% | |
| AAAATTGAATGAGATGTCAG+TGG | + | chr8_2:19227548-19227567 | None:intergenic | 30.0% | |
| ! | ACTGACATCTCATTCAATTT+TGG | - | chr8_2:19227547-19227566 | Msa1238660:intron | 30.0% |
| ACAAGATTGTATGAATTCTC+TGG | + | chr8_2:19227642-19227661 | None:intergenic | 30.0% | |
| GAATTCATACAATCTTGTGA+AGG | - | chr8_2:19227644-19227663 | Msa1238660:intron | 30.0% | |
| AGAATATTGTGGAGAGATTA+AGG | - | chr8_2:19227671-19227690 | Msa1238660:intron | 30.0% | |
| !! | TTATATAGCCTTATTACCTC+AGG | + | chr8_2:19227714-19227733 | None:intergenic | 30.0% |
| GAAGTTTACTTGAACACAAT+GGG | + | chr8_2:19228046-19228065 | None:intergenic | 30.0% | |
| AGAAGTTTACTTGAACACAA+TGG | + | chr8_2:19228047-19228066 | None:intergenic | 30.0% | |
| AAAACCTTGGTTGTAGTAAT+AGG | + | chr8_2:19228168-19228187 | None:intergenic | 30.0% | |
| TCTGTAAAAACGGTGAAAAA+CGG | + | chr8_2:19228251-19228270 | None:intergenic | 30.0% | |
| TCTATGTCTATTGTCATGAA+CGG | + | chr8_2:19228342-19228361 | None:intergenic | 30.0% | |
| CTTATAGGATTTCGCAATTT+CGG | + | chr8_2:19228578-19228597 | None:intergenic | 30.0% | |
| !! | GTAGTCAAGGTTCTAAATAA+CGG | + | chr8_2:19228610-19228629 | None:intergenic | 30.0% |
| CAAGAACTTGATTGTTAATG+AGG | + | chr8_2:19228638-19228657 | None:intergenic | 30.0% | |
| !! | TGTCACAATTTGTTAAACAC+CGG | + | chr8_2:19228695-19228714 | None:intergenic | 30.0% |
| !! | TTTGGAAAAGTGTTGCATTA+CGG | - | chr8_2:19228803-19228822 | Msa1238660:intron | 30.0% |
| ! | TTGCATTACGGATTTGAAAT+TGG | - | chr8_2:19228815-19228834 | Msa1238660:intron | 30.0% |
| ! | TGCATTACGGATTTGAAATT+GGG | - | chr8_2:19228816-19228835 | Msa1238660:intron | 30.0% |
| !!! | GGTGAGTTCTAGATTATTTT+TGG | - | chr8_2:19228888-19228907 | Msa1238660:intron | 30.0% |
| !! | TCAGATTGGTTTGTTTAGTT+TGG | + | chr8_2:19229111-19229130 | None:intergenic | 30.0% |
| !! | TTTGTTGTTGTGTTTCAGAT+TGG | + | chr8_2:19229125-19229144 | None:intergenic | 30.0% |
| !!! | CCGCACAATAAGTTTTTTTT+TGG | + | chr8_2:19229235-19229254 | None:intergenic | 30.0% |
| ! | TATCGACTGAATATAAGATC+AGG | - | chr8_2:19229279-19229298 | Msa1238660:intron | 30.0% |
| TAATTGAGGTTATATGAAGG+TGG | + | chr8_2:19230052-19230071 | None:intergenic | 30.0% | |
| CACTAATTGAGGTTATATGA+AGG | + | chr8_2:19230055-19230074 | None:intergenic | 30.0% | |
| GGAAATAGTAACATGAAGTT+TGG | - | chr8_2:19230584-19230603 | Msa1238660:intron | 30.0% | |
| !!! | CTGATTCAGGCTTTTTTTTT+TGG | - | chr8_2:19230909-19230928 | Msa1238660:intron | 30.0% |
| GTCGTTGTATGCTATTAAAA+TGG | - | chr8_2:19231542-19231561 | Msa1238660:intron | 30.0% | |
| TGAGCTCAATCTAAAGATAA+TGG | - | chr8_2:19232003-19232022 | Msa1238660:CDS | 30.0% | |
| TATAGTGCAGATGATAATCT+TGG | - | chr8_2:19232037-19232056 | Msa1238660:CDS | 30.0% | |
| ACAAGTTTGTAAGAATTCTC+TGG | + | chr8_2:19232429-19232448 | None:intergenic | 30.0% | |
| GAATTCTTACAAACTTGTGA+AGG | - | chr8_2:19232431-19232450 | Msa1238660:intron | 30.0% | |
| GTGAAGGATGAAAAATATTG+TGG | - | chr8_2:19232447-19232466 | Msa1238660:intron | 30.0% | |
| AAAATATTGTGGAGAGGTTA+AGG | - | chr8_2:19232458-19232477 | Msa1238660:intron | 30.0% | |
| CATCCATGTAATTCTTGATT+TGG | + | chr8_2:19232701-19232720 | None:intergenic | 30.0% | |
| !! | GAGGCATCTTTCTTTGATTT+TGG | + | chr8_2:19226394-19226413 | None:intergenic | 35.0% |
| CTGTAACTAAGGATCACATA+AGG | + | chr8_2:19226877-19226896 | None:intergenic | 35.0% | |
| GAAAAGTCTCATTCCATTGT+GGG | + | chr8_2:19227040-19227059 | None:intergenic | 35.0% | |
| AGAAAAGTCTCATTCCATTG+TGG | + | chr8_2:19227041-19227060 | None:intergenic | 35.0% | |
| TCTTCAAACACTGCTTCTAA+AGG | + | chr8_2:19227609-19227628 | None:intergenic | 35.0% | |
| TTTAGAAGCAGTGTTTGAAG+AGG | - | chr8_2:19227608-19227627 | Msa1238660:intron | 35.0% | |
| TTAGAAGCAGTGTTTGAAGA+GGG | - | chr8_2:19227609-19227628 | Msa1238660:intron | 35.0% | |
| GATTGTATGAATTCTCTGGA+AGG | + | chr8_2:19227638-19227657 | None:intergenic | 35.0% | |
| GTGAAGGATGAAGAATATTG+TGG | - | chr8_2:19227660-19227679 | Msa1238660:intron | 35.0% | |
| ATATTGTGGAGAGATTAAGG+TGG | - | chr8_2:19227674-19227693 | Msa1238660:intron | 35.0% | |
| ! | CTTTTACACCTGAGGTAATA+AGG | - | chr8_2:19227703-19227722 | Msa1238660:intron | 35.0% |
| TGATCAGAGTTACAATGAAG+AGG | - | chr8_2:19227825-19227844 | Msa1238660:intron | 35.0% | |
| !!! | GACTTTTGAAGTGAATGAAG+AGG | - | chr8_2:19227880-19227899 | Msa1238660:intron | 35.0% |
| TCAACCTATTACTACAACCA+AGG | - | chr8_2:19228161-19228180 | Msa1238660:intron | 35.0% | |
| !!! | CTGACCGTTTTTTAAAACCT+TGG | + | chr8_2:19228181-19228200 | None:intergenic | 35.0% |
| TAATGAGGTTGTTGTAGTCA+AGG | + | chr8_2:19228623-19228642 | None:intergenic | 35.0% | |
| CAACCAAACACTGATATTTC+CGG | - | chr8_2:19228673-19228692 | Msa1238660:intron | 35.0% | |
| AATTGTTATACCGAACGTCT+TGG | + | chr8_2:19229021-19229040 | None:intergenic | 35.0% | |
| GACTGAATATAAGATCAGGA+TGG | - | chr8_2:19229283-19229302 | Msa1238660:intron | 35.0% | |
| TGAATATAAGATCAGGATGG+CGG | - | chr8_2:19229286-19229305 | Msa1238660:intron | 35.0% | |
| ! | GTTTTCTTGAATGCAGAGAA+GGG | + | chr8_2:19229389-19229408 | None:intergenic | 35.0% |
| ! | AGTTTTCTTGAATGCAGAGA+AGG | + | chr8_2:19229390-19229409 | None:intergenic | 35.0% |
| TTACAATGTTATGCTGATGC+AGG | - | chr8_2:19229414-19229433 | Msa1238660:intron | 35.0% | |
| GTCAAGAATGTGTTTCGTTA+AGG | - | chr8_2:19229557-19229576 | Msa1238660:intron | 35.0% | |
| ACTCATGATCTTCAGAAGAA+TGG | - | chr8_2:19229732-19229751 | Msa1238660:intron | 35.0% | |
| GTTGTTCAAAAACTCTGCTT+GGG | + | chr8_2:19229821-19229840 | None:intergenic | 35.0% | |
| AGTTGTTCAAAAACTCTGCT+TGG | + | chr8_2:19229822-19229841 | None:intergenic | 35.0% | |
| AAAGATGGTTGAATTGTCGA+GGG | - | chr8_2:19229871-19229890 | Msa1238660:intron | 35.0% | |
| TATATGAAGGTGGAAGACTA+CGG | + | chr8_2:19230042-19230061 | None:intergenic | 35.0% | |
| TCATTGAATCATTGCAAGAG+TGG | + | chr8_2:19230265-19230284 | None:intergenic | 35.0% | |
| CATTGCTTATCATATCTAGG+TGG | + | chr8_2:19230313-19230332 | None:intergenic | 35.0% | |
| CACCTAGATATGATAAGCAA+TGG | - | chr8_2:19230311-19230330 | Msa1238660:intron | 35.0% | |
| GTCCATTGCTTATCATATCT+AGG | + | chr8_2:19230316-19230335 | None:intergenic | 35.0% | |
| GACAATTTGCCAAAAACACA+TGG | - | chr8_2:19230333-19230352 | Msa1238660:intron | 35.0% | |
| ! | ACTCTCTGGTTCATAAAGAA+AGG | - | chr8_2:19230562-19230581 | Msa1238660:intron | 35.0% |
| ! | CTCTCTGGTTCATAAAGAAA+GGG | - | chr8_2:19230563-19230582 | Msa1238660:intron | 35.0% |
| TGAACTTCAATAAATCGGCT+GGG | + | chr8_2:19230669-19230688 | None:intergenic | 35.0% | |
| ATGAACTTCAATAAATCGGC+TGG | + | chr8_2:19230670-19230689 | None:intergenic | 35.0% | |
| !! | TGGTTAAGAGCTTTTGATTC+TGG | + | chr8_2:19230967-19230986 | None:intergenic | 35.0% |
| !!! | GTTGTTTTGATCAGTGCAAA+AGG | - | chr8_2:19231034-19231053 | Msa1238660:intron | 35.0% |
| ! | CTGAATTGATTCACTGAATC+AGG | + | chr8_2:19231250-19231269 | None:intergenic | 35.0% |
| CTGATTCAGTGAATCAATTC+AGG | - | chr8_2:19231248-19231267 | Msa1238660:CDS | 35.0% | |
| TAATAGTCCAATTCACGAGT+CGG | - | chr8_2:19231329-19231348 | Msa1238660:intron | 35.0% | |
| !! | TGCAACGTTGTTTGATTTTC+CGG | - | chr8_2:19231376-19231395 | Msa1238660:intron | 35.0% |
| AAAGGAACACTATAACAAGC+CGG | + | chr8_2:19231398-19231417 | None:intergenic | 35.0% | |
| TTATGTGATCCTCACTTACA+GGG | - | chr8_2:19231791-19231810 | Msa1238660:intron | 35.0% | |
| TCATGAATAATATCAGGTGC+TGG | - | chr8_2:19231926-19231945 | Msa1238660:intron | 35.0% | |
| !! | TCGTCTTCTTTCGAGTTAAA+TGG | - | chr8_2:19232110-19232129 | Msa1238660:intron | 35.0% |
| TCTTGAATCACTGTCTCTAA+AGG | + | chr8_2:19232396-19232415 | None:intergenic | 35.0% | |
| TTTAGAGACAGTGATTCAAG+AGG | - | chr8_2:19232395-19232414 | Msa1238660:intron | 35.0% | |
| TTAGAGACAGTGATTCAAGA+GGG | - | chr8_2:19232396-19232415 | Msa1238660:intron | 35.0% | |
| GGATGAAAAATATTGTGGAG+AGG | - | chr8_2:19232452-19232471 | Msa1238660:intron | 35.0% | |
| ! | CTTTTACACCTGAGGTAATA+AGG | - | chr8_2:19227703-19227722 | Msa1238660:intron | 35.0% |
| CGATCCCCAAAAATATAACA+TGG | + | chr8_2:19232876-19232895 | None:intergenic | 35.0% | |
| !!! | TTACTGATTCAGGCCTTTTC+TGG | - | chr8_2:19226260-19226279 | Msa1238660:three_prime_UTR | 40.0% |
| AATCAAAGAAAGATGCCTCG+TGG | - | chr8_2:19226395-19226414 | Msa1238660:three_prime_UTR | 40.0% | |
| ATAACTTCAAGAGTTCCACG+AGG | + | chr8_2:19226413-19226432 | None:intergenic | 40.0% | |
| TCAGAGTTACAATGAAGAGG+AGG | - | chr8_2:19227828-19227847 | Msa1238660:intron | 40.0% | |
| AATGAAGAGGTTGAGACTTG+TGG | - | chr8_2:19227893-19227912 | Msa1238660:intron | 40.0% | |
| ! | CTACCTATACCTTTTTGTCG+CGG | + | chr8_2:19228219-19228238 | None:intergenic | 40.0% |
| ! | CGACAAAAAGGTATAGGTAG+CGG | - | chr8_2:19228219-19228238 | Msa1238660:intron | 40.0% |
| !!! | GCAATTTTTTGCGACCGTAA+CGG | + | chr8_2:19228320-19228339 | None:intergenic | 40.0% |
| !! | AAGGTTCTAAATAACGGTCG+CGG | + | chr8_2:19228604-19228623 | None:intergenic | 40.0% |
| ACACCGGAAATATCAGTGTT+TGG | + | chr8_2:19228679-19228698 | None:intergenic | 40.0% | |
| ! | GCAACACTTTTCCAAACTTG+AGG | + | chr8_2:19228799-19228818 | None:intergenic | 40.0% |
| TAAAACTTGGCATGCTATGC+AGG | + | chr8_2:19228916-19228935 | None:intergenic | 40.0% | |
| GTCGTTCATTAAGACAACAG+AGG | - | chr8_2:19229322-19229341 | Msa1238660:intron | 40.0% | |
| TGAACTCTTAGCACTACATG+AGG | - | chr8_2:19229531-19229550 | Msa1238660:intron | 40.0% | |
| CAACACATACAAACGAGTTG+TGG | - | chr8_2:19229588-19229607 | Msa1238660:intron | 40.0% | |
| CGAGTTGTGGTTTATCTATC+AGG | - | chr8_2:19229601-19229620 | Msa1238660:intron | 40.0% | |
| CAAAGATGGTTGAATTGTCG+AGG | - | chr8_2:19229870-19229889 | Msa1238660:intron | 40.0% | |
| AAGATGGTTGAATTGTCGAG+GGG | - | chr8_2:19229872-19229891 | Msa1238660:intron | 40.0% | |
| TGCTTATCATATCTAGGTGG+CGG | + | chr8_2:19230310-19230329 | None:intergenic | 40.0% | |
| GTAACATGAAGTTTGGTCCA+AGG | - | chr8_2:19230591-19230610 | Msa1238660:intron | 40.0% | |
| CACCATGACGATCAACAATA+TGG | + | chr8_2:19231355-19231374 | None:intergenic | 40.0% | |
| CATATTGTTGATCGTCATGG+TGG | - | chr8_2:19231353-19231372 | Msa1238660:intron | 40.0% | |
| CTGTAAGTGAGGATCACATA+AGG | + | chr8_2:19231792-19231811 | None:intergenic | 40.0% | |
| CTTATGTGATCCTCACTTAC+AGG | - | chr8_2:19231790-19231809 | Msa1238660:intron | 40.0% | |
| GAAATGTCTCGTTCCATTGA+GGG | + | chr8_2:19231958-19231977 | None:intergenic | 40.0% | |
| AGAAATGTCTCGTTCCATTG+AGG | + | chr8_2:19231959-19231978 | None:intergenic | 40.0% | |
| CTCGAAAGAAGACGAATCAA+AGG | + | chr8_2:19232105-19232124 | None:intergenic | 40.0% | |
| ATATTGTGGAGAGGTTAAGG+TGG | - | chr8_2:19232461-19232480 | Msa1238660:intron | 40.0% | |
| GGTTTCATCCTTATTACCTC+AGG | + | chr8_2:19232501-19232520 | None:intergenic | 40.0% | |
| GGTTGCAGAGAAACTATGAA+CGG | - | chr8_2:19232591-19232610 | Msa1238660:intron | 40.0% | |
| TGAACGGAGTTACAATCAAG+AGG | - | chr8_2:19232607-19232626 | Msa1238660:intron | 40.0% | |
| GGGACTATTGAAGTGAATGA+TGG | - | chr8_2:19232660-19232679 | Msa1238660:CDS | 40.0% | |
| CGGCCAAATCAAGAATTACA+TGG | - | chr8_2:19232695-19232714 | Msa1238660:five_prime_UTR | 40.0% | |
| GATCCTTAGTTACAGTGCAC+AGG | - | chr8_2:19226882-19226901 | Msa1238660:intron | 45.0% | |
| !! | CACAAGAGTGCTGTTCAAGA+AGG | - | chr8_2:19226907-19226926 | Msa1238660:intron | 45.0% |
| TTTCCTTTGTGCCCTCCTTT+AGG | + | chr8_2:19227444-19227463 | None:intergenic | 45.0% | |
| TACAATGAAGAGGAGGAGAC+TGG | - | chr8_2:19227835-19227854 | Msa1238660:intron | 45.0% | |
| ACGGTCAGCTACAGAGAAAA+AGG | - | chr8_2:19228193-19228212 | Msa1238660:intron | 45.0% | |
| AGAAAAAGGCCGCGACAAAA+AGG | - | chr8_2:19228207-19228226 | Msa1238660:intron | 45.0% | |
| TTTCGCAATTTCGGCCGTTA+CGG | + | chr8_2:19228569-19228588 | None:intergenic | 45.0% | |
| AGAATCGCACACCTCAAGTT+TGG | - | chr8_2:19228785-19228804 | Msa1238660:intron | 45.0% | |
| TGGTGAAGAAACGGCACAAT+AGG | + | chr8_2:19229215-19229234 | None:intergenic | 45.0% | |
| GACAACAGAGGAATCGAACT+TGG | - | chr8_2:19229334-19229353 | Msa1238660:intron | 45.0% | |
| GAGGAATCGAACTTGGAACT+TGG | - | chr8_2:19229341-19229360 | Msa1238660:intron | 45.0% | |
| AAGGGTCTTCTCATAGGCAT+AGG | + | chr8_2:19229371-19229390 | None:intergenic | 45.0% | |
| TTGGGAGTGACTGTGTGAAA+AGG | + | chr8_2:19229803-19229822 | None:intergenic | 45.0% | |
| !! | AACCATCTTTGAGACGACGA+AGG | + | chr8_2:19229861-19229880 | None:intergenic | 45.0% |
| AGATGGTTGAATTGTCGAGG+GGG | - | chr8_2:19229873-19229892 | Msa1238660:intron | 45.0% | |
| GCTTATCATATCTAGGTGGC+GGG | + | chr8_2:19230309-19230328 | None:intergenic | 45.0% | |
| ! | GATGCTGCACCATGTGTTTT+TGG | + | chr8_2:19230345-19230364 | None:intergenic | 45.0% |
| AATCAGAGAAAGATGCCTCG+TGG | - | chr8_2:19231001-19231020 | Msa1238660:intron | 45.0% | |
| !! | AATATGGCCGACTCGTGAAT+TGG | + | chr8_2:19231339-19231358 | None:intergenic | 45.0% |
| GGCCATATTGTTGATCGTCA+TGG | - | chr8_2:19231350-19231369 | Msa1238660:intron | 45.0% | |
| !! | CACAAGAGTACTGTGCAAGA+AGG | - | chr8_2:19231822-19231841 | Msa1238660:intron | 45.0% |
| ACGGAGTTACAATCAAGAGG+AGG | - | chr8_2:19232610-19232629 | Msa1238660:intron | 45.0% | |
| TACAATCAAGAGGAGGAGAC+TGG | - | chr8_2:19232617-19232636 | Msa1238660:intron | 45.0% | |
| ! | GACTGGTGGATGGAAACAAT+CGG | - | chr8_2:19227852-19227871 | Msa1238660:intron | 45.0% |
| TGGATGGAAACAATCGGCTA+GGG | - | chr8_2:19232640-19232659 | Msa1238660:CDS | 45.0% | |
| !! | TGTATTTATATAAAATAAAA+TGG | - | chr8_2:19230736-19230755 | Msa1238660:intron | 5.0% |
| GCTCCTGTGCACTGTAACTA+AGG | + | chr8_2:19226888-19226907 | None:intergenic | 50.0% | |
| GTGCTGGATCTAACCCACAA+TGG | - | chr8_2:19227024-19227043 | Msa1238660:intron | 50.0% | |
| ! | ACACCTAAAGGAGGGCACAA+AGG | - | chr8_2:19227438-19227457 | Msa1238660:intron | 50.0% |
| !! | GGCTCTCACTTTTACACCTG+AGG | - | chr8_2:19227695-19227714 | Msa1238660:intron | 50.0% |
| AATGAAGAGGAGGAGACTGG+TGG | - | chr8_2:19227838-19227857 | Msa1238660:intron | 50.0% | |
| GAAGAGGTTGAGACTTGTGG+TGG | - | chr8_2:19227896-19227915 | Msa1238660:intron | 50.0% | |
| ! | AGGCCGCGACAAAAAGGTAT+AGG | - | chr8_2:19228213-19228232 | Msa1238660:intron | 50.0% |
| TTCGCAATTTCGGCCGTTAC+GGG | + | chr8_2:19228568-19228587 | None:intergenic | 50.0% | |
| ATGAGTCGTGGTTCGAACTC+TGG | - | chr8_2:19228995-19229014 | Msa1238660:intron | 50.0% | |
| !! | AGATCAGGATGGCGGAGAAA+TGG | - | chr8_2:19229294-19229313 | Msa1238660:intron | 50.0% |
| GCAGAGAAGGGTCTTCTCAT+AGG | + | chr8_2:19229377-19229396 | None:intergenic | 50.0% | |
| GATGGTTGAATTGTCGAGGG+GGG | - | chr8_2:19229874-19229893 | Msa1238660:intron | 50.0% | |
| ATGGTTGAATTGTCGAGGGG+GGG | - | chr8_2:19229875-19229894 | Msa1238660:intron | 50.0% | |
| ACAACTTCAAGCGTTCCACG+AGG | + | chr8_2:19231019-19231038 | None:intergenic | 50.0% | |
| AACCCTACGCATGAGTACTC+CGG | - | chr8_2:19231487-19231506 | Msa1238660:intron | 50.0% | |
| ! | AACCGGAGTACTCATGCGTA+GGG | + | chr8_2:19231492-19231511 | None:intergenic | 50.0% |
| ! | AAACCGGAGTACTCATGCGT+AGG | + | chr8_2:19231493-19231512 | None:intergenic | 50.0% |
| TACGCATGAGTACTCCGGTT+TGG | - | chr8_2:19231492-19231511 | Msa1238660:intron | 50.0% | |
| TGTCTCGTTCCATTGAGGGT+TGG | + | chr8_2:19231954-19231973 | None:intergenic | 50.0% | |
| !! | GGCTCTCACTTTTACACCTG+AGG | - | chr8_2:19227695-19227714 | Msa1238660:intron | 50.0% |
| AATCAAGAGGAGGAGACTGG+TGG | - | chr8_2:19232620-19232639 | Msa1238660:intron | 50.0% | |
| GTGGATGGAAACAATCGGCT+AGG | - | chr8_2:19232639-19232658 | Msa1238660:CDS | 50.0% | |
| AAGAGGAGGAGACTGGTGGA+TGG | - | chr8_2:19227842-19227861 | Msa1238660:intron | 55.0% | |
| ACCGTAACGGTGTTTCGTCG+CGG | + | chr8_2:19228307-19228326 | None:intergenic | 55.0% | |
| ! | GATACGGATTGCGGTTGTCG+CGG | + | chr8_2:19228539-19228558 | None:intergenic | 55.0% |
| ! | GGGTGTTGCGATACGGATTG+CGG | + | chr8_2:19228548-19228567 | None:intergenic | 55.0% |
| ! | CCGTTACGGGTGTTGCGATA+CGG | + | chr8_2:19228555-19228574 | None:intergenic | 55.0% |
| CCGTATCGCAACACCCGTAA+CGG | - | chr8_2:19228552-19228571 | Msa1238660:intron | 55.0% | |
| TAACGGTCGCGGTCGCTTAT+AGG | + | chr8_2:19228593-19228612 | None:intergenic | 55.0% | |
| GGAACTCTCACACGCACAAG+TGG | - | chr8_2:19228972-19228991 | Msa1238660:intron | 55.0% | |
| ACGCACAAGTGGATGAGTCG+TGG | - | chr8_2:19228983-19229002 | Msa1238660:intron | 55.0% | |
| CGAACTCTGGCCAAGACGTT+CGG | - | chr8_2:19229008-19229027 | Msa1238660:intron | 55.0% | |
| TGCTGATGTAGCGATGGCAG+CGG | - | chr8_2:19229255-19229274 | Msa1238660:intron | 55.0% | |
| !! | TCAGGATGGCGGAGAAATGG+AGG | - | chr8_2:19229297-19229316 | Msa1238660:intron | 55.0% |
| GGCCTTCGTCGTCTCAAAGA+TGG | - | chr8_2:19229856-19229875 | Msa1238660:intron | 55.0% | |
| GATCCTCACTTACAGGGCAC+AGG | - | chr8_2:19231797-19231816 | Msa1238660:intron | 55.0% | |
| GTGCTGGATCCAACCCTCAA+TGG | - | chr8_2:19231942-19231961 | Msa1238660:intron | 55.0% | |
| AAGAGGAGGAGACTGGTGGA+TGG | - | chr8_2:19227842-19227861 | Msa1238660:intron | 55.0% | |
| GCCGCGACGAAACACCGTTA+CGG | - | chr8_2:19228303-19228322 | Msa1238660:intron | 60.0% | |
| !! | GTGCGGTGCTGATGTAGCGA+TGG | - | chr8_2:19229249-19229268 | Msa1238660:intron | 60.0% |
| GCTGATGTAGCGATGGCAGC+GGG | - | chr8_2:19229256-19229275 | Msa1238660:intron | 60.0% | |
| GCTCCTGTGCCCTGTAAGTG+AGG | + | chr8_2:19231803-19231822 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 19226195 | 19232906 | 19226195 | ID=Msa1238660;Name=Msa1238660 |
| chr8_2 | mRNA | 19226195 | 19232906 | 19226195 | ID=Msa1238660-mRNA-1;Parent=Msa1238660;Name=Msa1238660-mRNA-1;_AED=0.22;_eAED=0.22;_QI=186|0.77|0.8|1|0.77|0.7|10|236|260 |
| chr8_2 | exon | 19226195 | 19226502 | 19226195 | ID=Msa1238660-mRNA-1:exon:7145;Parent=Msa1238660-mRNA-1 |
| chr8_2 | exon | 19226598 | 19226712 | 19226598 | ID=Msa1238660-mRNA-1:exon:7144;Parent=Msa1238660-mRNA-1 |
| chr8_2 | exon | 19227033 | 19227159 | 19227033 | ID=Msa1238660-mRNA-1:exon:7143;Parent=Msa1238660-mRNA-1 |
| chr8_2 | exon | 19227258 | 19227323 | 19227258 | ID=Msa1238660-mRNA-1:exon:7142;Parent=Msa1238660-mRNA-1 |
| chr8_2 | exon | 19231224 | 19231284 | 19231224 | ID=Msa1238660-mRNA-1:exon:7141;Parent=Msa1238660-mRNA-1 |
| chr8_2 | exon | 19231385 | 19231466 | 19231385 | ID=Msa1238660-mRNA-1:exon:7140;Parent=Msa1238660-mRNA-1 |
| chr8_2 | exon | 19231951 | 19232077 | 19231951 | ID=Msa1238660-mRNA-1:exon:7139;Parent=Msa1238660-mRNA-1 |
| chr8_2 | exon | 19232173 | 19232238 | 19232173 | ID=Msa1238660-mRNA-1:exon:7138;Parent=Msa1238660-mRNA-1 |
| chr8_2 | exon | 19232628 | 19232766 | 19232628 | ID=Msa1238660-mRNA-1:exon:7137;Parent=Msa1238660-mRNA-1 |
| chr8_2 | exon | 19232793 | 19232906 | 19232793 | ID=Msa1238660-mRNA-1:exon:7136;Parent=Msa1238660-mRNA-1 |
| chr8_2 | five_prime_UTR | 19232793 | 19232906 | 19232793 | ID=Msa1238660-mRNA-1:five_prime_utr;Parent=Msa1238660-mRNA-1 |
| chr8_2 | five_prime_UTR | 19232695 | 19232766 | 19232695 | ID=Msa1238660-mRNA-1:five_prime_utr;Parent=Msa1238660-mRNA-1 |
| chr8_2 | CDS | 19232628 | 19232694 | 19232628 | ID=Msa1238660-mRNA-1:cds;Parent=Msa1238660-mRNA-1 |
| chr8_2 | CDS | 19232173 | 19232238 | 19232173 | ID=Msa1238660-mRNA-1:cds;Parent=Msa1238660-mRNA-1 |
| chr8_2 | CDS | 19231951 | 19232077 | 19231951 | ID=Msa1238660-mRNA-1:cds;Parent=Msa1238660-mRNA-1 |
| chr8_2 | CDS | 19231385 | 19231466 | 19231385 | ID=Msa1238660-mRNA-1:cds;Parent=Msa1238660-mRNA-1 |
| chr8_2 | CDS | 19231224 | 19231284 | 19231224 | ID=Msa1238660-mRNA-1:cds;Parent=Msa1238660-mRNA-1 |
| chr8_2 | CDS | 19227258 | 19227323 | 19227258 | ID=Msa1238660-mRNA-1:cds;Parent=Msa1238660-mRNA-1 |
| chr8_2 | CDS | 19227033 | 19227159 | 19227033 | ID=Msa1238660-mRNA-1:cds;Parent=Msa1238660-mRNA-1 |
| chr8_2 | CDS | 19226598 | 19226712 | 19226598 | ID=Msa1238660-mRNA-1:cds;Parent=Msa1238660-mRNA-1 |
| chr8_2 | CDS | 19226431 | 19226502 | 19226431 | ID=Msa1238660-mRNA-1:cds;Parent=Msa1238660-mRNA-1 |
| chr8_2 | three_prime_UTR | 19226195 | 19226430 | 19226195 | ID=Msa1238660-mRNA-1:three_prime_utr;Parent=Msa1238660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
