AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1442920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1442920 MtrunA17_Chr2g0304841 90.526 665 59 2 3 666 4 665 0.0 1206
Msa1442920 MtrunA17_Chr4g0074401 43.161 658 296 13 1 651 1 587 1.26e-145 436
Msa1442920 MtrunA17_Chr4g0074411 42.393 677 304 17 1 666 2 603 4.68e-141 425
Msa1442920 MtrunA17_Chr3g0137101 47.421 504 217 9 15 496 6 483 1.22e-133 407
Msa1442920 MtrunA17_Chr1g0149841 43.852 488 222 10 15 496 3 444 1.60e-113 350
Msa1442920 MtrunA17_Chr1g0149851 50.427 351 138 7 15 345 3 337 1.87e-97 310
Msa1442920 MtrunA17_Chr7g0275891 47.287 387 122 13 15 384 3 324 3.81e-93 292
Msa1442920 MtrunA17_Chr4g0067981 45.526 380 174 7 15 382 29 387 3.38e-91 297
Msa1442920 MtrunA17_Chr1g0161431 49.508 305 137 5 17 317 11 302 2.96e-86 283
Msa1442920 MtrunA17_Chr2g0294911 42.896 366 173 8 13 375 25 357 6.70e-85 278
Msa1442920 MtrunA17_Chr7g0275401 55.385 260 105 3 15 274 3 251 7.00e-85 268
Msa1442920 MtrunA17_Chr8g0376881 52.692 260 107 3 14 272 22 266 1.29e-80 265
Msa1442920 MtrunA17_Chr3g0123131 54.086 257 104 3 17 272 13 256 1.71e-79 263
Msa1442920 MtrunA17_Chr4g0074421 57.143 203 70 3 67 269 2 187 6.24e-64 210
Msa1442920 MtrunA17_Chr1g0149831 56.784 199 71 3 76 274 1 184 1.08e-63 210
Msa1442920 MtrunA17_Chr3g0134481 65.909 132 45 0 11 142 2 133 8.58e-54 182
Msa1442920 MtrunA17_Chr3g0134481 62.264 53 20 0 214 266 131 183 2.01e-16 78.2
Msa1442920 MtrunA17_Chr4g0009851 36.822 258 123 4 17 274 11 228 1.16e-47 170
Msa1442920 MtrunA17_Chr4g0009901 34.630 257 128 4 17 273 10 226 1.09e-43 158
Msa1442920 MtrunA17_Chr3g0134461 63.433 134 48 1 11 143 2 135 4.99e-40 145
Msa1442920 MtrunA17_Chr3g0134461 67.797 59 19 0 206 264 134 192 1.66e-18 84.3
Msa1442920 MtrunA17_Chr4g0009981 35.211 213 99 3 62 274 2 175 3.95e-36 136
Msa1442920 MtrunA17_Chr6g0471041 32.331 266 138 5 11 275 8 232 2.50e-35 138
Msa1442920 MtrunA17_Chr8g0391911 30.588 255 149 5 17 264 9 242 5.11e-28 113
Msa1442920 MtrunA17_Chr8g0350761 27.843 255 174 4 20 267 20 271 5.09e-26 112
Msa1442920 MtrunA17_Chr3g0127941 38.095 126 73 2 21 142 56 180 5.70e-24 107
Msa1442920 MtrunA17_Chr7g0276361 38.356 146 77 3 18 153 11 153 9.41e-24 106
Msa1442920 MtrunA17_Chr4g0031961 60.526 76 30 0 197 272 113 188 1.22e-23 102
Msa1442920 MtrunA17_Chr6g0473731 35.625 160 70 2 112 271 25 151 1.90e-23 103
Msa1442920 MtrunA17_Chr1g0181811 39.344 122 71 2 21 139 85 206 2.88e-23 105
Msa1442920 MtrunA17_Chr4g0030271 40.945 127 71 2 17 139 84 210 3.08e-23 105
Msa1442920 MtrunA17_Chr7g0255711 59.155 71 29 0 202 272 78 148 8.41e-22 96.7
Msa1442920 MtrunA17_Chr8g0345901 34.932 146 84 2 23 157 38 183 6.46e-21 97.4
Msa1442920 MtrunA17_Chr8g0383961 33.094 139 93 0 9 147 6 144 9.95e-21 92.4
Msa1442920 MtrunA17_Chr4g0009991 32.258 155 65 2 110 264 2 116 7.41e-20 85.9
Msa1442920 MtrunA17_Chr3g0091641 28.251 223 147 4 5 218 10 228 1.92e-19 92.4
Msa1442920 MtrunA17_Chr4g0011071 28.571 175 86 3 67 241 39 174 1.17e-18 84.3
Msa1442920 MtrunA17_Chr4g0061021 31.373 153 100 2 5 154 19 169 1.31e-18 90.1
Msa1442920 MtrunA17_Chr6g0456631 31.579 133 88 2 15 145 7 138 5.46e-18 82.0
Msa1442920 MtrunA17_Chr4g0054981 56.923 65 28 0 211 275 306 370 7.20e-18 87.4
Msa1442920 MtrunA17_Chr4g0054981 32.800 125 78 4 17 139 14 134 6.73e-11 65.5
Msa1442920 MtrunA17_Chr5g0400241 35.484 155 81 5 211 360 307 447 1.71e-17 86.3
Msa1442920 MtrunA17_Chr5g0400241 36.508 126 72 5 17 139 14 134 1.03e-12 71.2
Msa1442920 MtrunA17_Chr2g0324891 47.436 78 41 0 194 271 140 217 3.33e-17 84.7
Msa1442920 MtrunA17_Chr4g0040481 56.452 62 27 0 210 271 153 214 4.76e-17 84.0
Msa1442920 MtrunA17_Chr6g0461641 57.627 59 24 1 211 268 38 96 2.38e-15 78.6
Msa1442920 MtrunA17_Chr2g0321461 57.627 59 24 1 211 268 41 99 4.01e-15 77.8
Msa1442920 MtrunA17_Chr7g0274471 56.522 69 28 2 213 279 216 284 4.05e-15 78.2
Msa1442920 MtrunA17_Chr1g0190301 58.621 58 23 1 211 267 171 228 7.89e-15 77.0
Msa1442920 MtrunA17_Chr1g0175081 53.333 60 27 1 217 275 24 83 1.06e-14 70.5
Msa1442920 MtrunA17_Chr7g0261911 58.621 58 23 1 211 267 258 315 1.47e-14 76.6
Msa1442920 MtrunA17_Chr4g0062921 49.231 65 32 1 212 275 232 296 1.87e-14 76.3
Msa1442920 MtrunA17_Chr5g0417521 54.237 59 26 1 211 268 11 69 2.13e-14 75.1
Msa1442920 MtrunA17_Chr1g0198601 35.897 117 68 3 208 319 204 318 2.26e-14 75.5
Msa1442920 MtrunA17_Chr5g0422621 32.886 149 82 6 205 348 188 323 4.78e-14 74.3
Msa1442920 MtrunA17_Chr4g0045361 40.566 106 48 4 212 310 271 368 7.86e-14 73.9
Msa1442920 MtrunA17_Chr7g0256551 31.579 171 86 5 21 170 9 169 2.61e-13 70.1
Msa1442920 MtrunA17_Chr2g0288601 53.333 60 27 1 214 272 70 129 6.94e-13 66.2
Msa1442920 MtrunA17_Chr6g0469321 70.455 44 13 0 231 274 70 113 7.00e-13 67.4
Msa1442920 MtrunA17_Chr5g0409731 54.545 55 24 1 215 268 25 79 1.06e-12 69.3
Msa1442920 MtrunA17_Chr1g0197171 52.542 59 27 1 211 268 40 98 1.60e-12 68.9
Msa1442920 MtrunA17_Chr2g0290991 44.595 74 36 2 200 268 20 93 4.89e-12 67.4
Msa1442920 MtrunA17_Chr5g0402631 50.000 62 30 1 212 272 211 272 5.10e-12 67.8
Msa1442920 MtrunA17_Chr7g0243081 54.545 55 24 1 214 267 70 124 5.19e-12 67.8
Msa1442920 MtrunA17_Chr7g0258551 57.407 54 22 1 215 267 212 265 5.82e-12 68.2
Msa1442920 MtrunA17_Chr4g0042451 49.153 59 29 1 211 268 13 71 6.03e-12 67.8
Msa1442920 MtrunA17_Chr7g0254981 54.545 55 24 1 215 268 50 104 6.42e-12 66.6
Msa1442920 MtrunA17_Chr2g0320231 54.545 55 24 1 214 267 96 150 1.09e-11 67.0
Msa1442920 MtrunA17_Chr1g0175091 56.364 55 23 1 215 268 258 312 1.17e-11 67.4
Msa1442920 MtrunA17_Chr8g0379121 52.727 55 25 1 214 267 110 164 1.22e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1442920 AT2G25180.1 45.476 431 202 10 13 430 9 419 1.07e-104 330
Msa1442920 AT5G58080.1 42.188 512 234 13 10 495 7 482 8.75e-97 311
Msa1442920 AT4G31920.1 45.412 425 166 11 13 430 9 374 1.55e-95 305
Msa1442920 AT3G16857.1 35.614 570 250 16 5 505 21 542 8.52e-91 296
Msa1442920 AT3G16857.2 35.614 570 250 16 5 505 21 542 1.07e-90 296
Msa1442920 AT1G67710.1 55.039 258 99 4 18 272 8 251 2.85e-78 259
Msa1442920 AT3G16857.3 34.682 519 222 16 56 505 2 472 5.51e-74 250
Msa1442920 AT2G01760.1 47.601 271 115 5 15 274 5 259 1.13e-71 237
Msa1442920 AT2G01760.2 43.144 299 115 6 15 274 5 287 1.43e-65 222
Msa1442920 AT1G67710.2 54.500 200 74 4 76 272 1 186 4.79e-53 189
Msa1442920 AT2G01760.3 48.571 210 81 5 76 274 1 194 3.44e-50 177
Msa1442920 AT5G49240.1 37.097 248 143 2 17 264 38 272 6.47e-44 159
Msa1442920 AT3G62670.1 38.211 246 124 7 36 275 54 277 1.32e-41 157
Msa1442920 AT1G67710.3 49.444 180 74 4 96 272 12 177 1.44e-38 149
Msa1442920 AT1G49190.1 29.446 343 194 9 3 335 16 320 3.01e-37 144
Msa1442920 AT5G07210.2 29.697 330 206 10 19 328 14 337 7.12e-33 134
Msa1442920 AT5G07210.1 28.994 338 206 11 19 328 14 345 2.11e-30 127
Msa1442920 AT2G27070.1 29.290 338 198 9 19 328 14 338 5.84e-30 125
Msa1442920 AT5G59570.2 52.688 93 44 0 180 272 106 198 1.97e-25 107
Msa1442920 AT5G59570.1 52.688 93 44 0 180 272 106 198 1.97e-25 107
Msa1442920 AT5G24470.1 38.194 144 80 4 11 146 36 178 3.50e-25 110
Msa1442920 AT2G46790.3 39.024 123 70 2 21 139 37 158 6.60e-24 105
Msa1442920 AT2G46790.1 39.024 123 70 2 21 139 37 158 7.74e-24 105
Msa1442920 AT1G49190.2 35.507 138 89 0 3 140 16 153 1.26e-23 106
Msa1442920 AT5G05090.1 58.667 75 30 1 199 272 64 138 3.73e-23 100
Msa1442920 AT3G10760.1 56.098 82 35 1 192 272 81 162 9.39e-23 100
Msa1442920 AT3G46640.2 69.492 59 18 0 214 272 143 201 1.96e-22 99.4
Msa1442920 AT3G46640.1 69.492 59 18 0 214 272 143 201 1.96e-22 99.4
Msa1442920 AT3G46640.3 58.904 73 30 0 200 272 129 201 2.25e-22 99.0
Msa1442920 AT2G40970.1 55.844 77 34 0 196 272 86 162 2.32e-22 97.4
Msa1442920 AT5G60100.7 37.008 127 76 2 17 139 59 185 3.56e-21 97.1
Msa1442920 AT5G60100.6 37.008 127 76 2 17 139 59 185 3.56e-21 97.1
Msa1442920 AT5G60100.4 37.008 127 76 2 17 139 59 185 3.56e-21 97.1
Msa1442920 AT5G60100.5 37.008 127 76 2 17 139 59 185 4.94e-21 97.4
Msa1442920 AT5G60100.3 37.008 127 76 2 17 139 59 185 4.94e-21 97.4
Msa1442920 AT5G60100.1 37.008 127 76 2 17 139 59 185 4.94e-21 97.4
Msa1442920 AT5G02810.1 37.705 122 73 1 21 139 78 199 5.91e-21 98.2
Msa1442920 AT5G60100.2 37.008 127 76 2 17 139 59 185 1.01e-20 96.7
Msa1442920 AT5G61380.1 35.075 134 82 2 11 141 11 142 8.11e-20 94.4
Msa1442920 AT5G44190.2 62.121 66 23 1 206 271 140 203 3.99e-19 90.1
Msa1442920 AT5G44190.1 62.121 66 23 1 206 271 140 203 4.98e-19 90.1
Msa1442920 AT1G68210.1 25.475 263 179 4 21 267 13 274 8.06e-19 91.7
Msa1442920 AT4G18020.8 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1442920 AT4G18020.11 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1442920 AT4G18020.4 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1442920 AT4G18020.5 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1442920 AT4G18020.10 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1442920 AT4G18020.7 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1442920 AT2G20570.1 59.322 59 24 0 213 271 151 209 3.72e-16 81.6
Msa1442920 AT4G18020.3 39.669 121 55 1 173 275 236 356 5.18e-16 82.0
Msa1442920 AT4G18020.2 39.669 121 55 1 173 275 236 356 5.18e-16 82.0
Msa1442920 AT4G18020.1 39.669 121 55 1 173 275 236 356 5.18e-16 82.0
Msa1442920 AT4G18020.6 39.669 121 55 1 173 275 236 356 5.18e-16 82.0
Msa1442920 AT4G18020.9 39.669 121 55 1 173 275 236 356 5.18e-16 82.0
Msa1442920 AT2G20570.2 61.818 55 21 0 217 271 171 225 1.79e-15 79.7
Msa1442920 AT3G04030.1 57.627 59 24 1 211 268 41 99 5.20e-15 77.8
Msa1442920 AT3G04030.3 57.627 59 24 1 211 268 41 99 5.53e-15 77.8
Msa1442920 AT5G18240.2 57.627 59 24 1 211 268 41 99 1.05e-14 77.0
Msa1442920 AT5G18240.3 57.627 59 24 1 211 268 41 99 1.05e-14 77.0
Msa1442920 AT5G18240.5 57.627 59 24 1 211 268 41 99 1.12e-14 77.0
Msa1442920 AT5G18240.1 57.627 59 24 1 211 268 41 99 1.23e-14 77.0
Msa1442920 AT5G18240.4 57.627 59 24 1 211 268 41 99 1.23e-14 77.0
Msa1442920 AT2G03500.1 50.769 65 31 1 212 275 230 294 1.94e-14 76.6
Msa1442920 AT1G25550.1 38.983 118 62 4 212 324 206 318 3.13e-14 75.1
Msa1442920 AT3G04030.2 53.448 58 27 0 211 268 41 98 6.85e-14 74.3
Msa1442920 AT2G42660.1 47.619 84 40 3 216 298 51 131 1.22e-13 72.0
Msa1442920 AT5G45580.1 56.364 55 23 1 215 268 7 61 4.71e-13 70.5
Msa1442920 AT5G45580.2 56.364 55 23 1 215 268 23 77 5.40e-13 70.5
Msa1442920 AT4G28610.1 49.231 65 32 1 215 278 225 289 2.28e-12 70.1
Msa1442920 AT1G68670.1 33.333 132 77 5 212 334 212 341 2.60e-12 69.3
Msa1442920 AT4G37180.1 43.750 80 38 2 210 282 199 278 3.46e-12 68.9
Msa1442920 AT4G37180.2 43.750 80 38 2 210 282 206 285 4.08e-12 68.9
Msa1442920 AT5G06800.3 50.000 68 33 1 202 268 179 246 5.55e-12 67.4
Msa1442920 AT3G25790.1 31.405 121 72 3 219 328 200 320 5.82e-12 68.2
Msa1442920 AT4G04605.1 54.545 55 24 1 214 267 13 67 9.66e-12 65.5
Msa1442920 AT5G29000.4 57.407 54 22 1 215 267 231 284 1.15e-11 67.0
Msa1442920 AT3G04450.3 55.556 54 23 1 215 267 238 291 1.39e-11 66.6
Msa1442920 AT2G01060.1 54.545 55 24 1 215 268 15 69 1.44e-11 66.2
Msa1442920 AT5G29000.1 51.429 70 30 2 215 283 188 254 1.47e-11 67.0
Msa1442920 AT5G29000.3 51.429 70 30 2 215 283 188 254 1.47e-11 67.0
Msa1442920 AT5G29000.2 57.407 54 22 1 215 267 231 284 1.66e-11 67.4
Msa1442920 AT3G04450.4 55.556 54 23 1 215 267 198 251 1.86e-11 67.0
Msa1442920 AT3G04450.2 55.556 54 23 1 215 267 198 251 1.86e-11 67.0
Msa1442920 AT3G04450.1 55.556 54 23 1 215 267 238 291 1.88e-11 67.4
Msa1442920 AT1G49560.1 43.210 81 42 2 214 290 191 271 2.00e-11 66.2
Msa1442920 AT5G06800.1 50.000 68 33 1 202 268 179 246 2.34e-11 66.6
Msa1442920 AT5G06800.2 50.000 68 33 1 202 268 179 246 2.40e-11 66.6
Msa1442920 AT2G38300.1 52.727 55 25 1 214 267 53 107 2.99e-11 65.9
Msa1442920 AT3G13040.3 53.571 56 25 1 214 268 240 295 3.27e-11 66.6
Msa1442920 AT3G13040.1 53.571 56 25 1 214 268 240 295 3.27e-11 66.6
Msa1442920 AT3G13040.2 53.571 56 25 1 214 268 240 295 3.27e-11 66.6
Msa1442920 AT2G06020.1 35.115 131 62 4 170 295 44 156 3.36e-11 65.5
Msa1442920 AT2G40260.1 52.727 55 25 1 214 267 81 135 4.96e-11 65.9
Msa1442920 AT3G56380.2 32.061 131 75 2 21 137 20 150 5.84e-11 61.6
Msa1442920 AT1G13300.1 41.892 74 42 1 200 272 166 239 6.91e-11 64.7

Find 177 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCATCTCGGCACATTTC+TGG 0.123885 tig0030242:-13883 None:intergenic
AATAATAATGCAGCTTTCTT+AGG 0.190771 tig0030242:-10887 None:intergenic
TTGCTTCCACCAGAAATATT+AGG 0.214532 tig0030242:-12280 None:intergenic
GTTGGATATGTTGAGGGTTT+TGG 0.226504 tig0030242:+14236 Msa1442920:CDS
TGTATCTAGTACTATTTCTT+TGG 0.251216 tig0030242:+14570 Msa1442920:three_prime_UTR
GATAAGGTCCCTAATATTTC+TGG 0.257219 tig0030242:+12271 Msa1442920:CDS
TGCACCCATTATGTCTTCTA+AGG 0.258237 tig0030242:-14261 None:intergenic
AAGCTTGAGCTTTGATTTGC+AGG 0.261012 tig0030242:-13375 None:intergenic
GACGAGAATTTCTCAACTTC+GGG 0.287871 tig0030242:-14158 None:intergenic
TTCTGTTGGATCTGCTTCCT+TGG 0.307813 tig0030242:+13617 Msa1442920:CDS
TCAAAAGGGTATGATTAAAT+TGG 0.309229 tig0030242:+14288 Msa1442920:exon
ACAAATTTCTTATGCAAATC+AGG 0.313939 tig0030242:-12475 None:intergenic
TGAAGGGACGACTCGTGTTT+TGG 0.320959 tig0030242:-13986 None:intergenic
ATATAGACTCTATCTGAAAA+AGG 0.324190 tig0030242:+13092 Msa1442920:CDS
ATTTCTCAACTTCGGGGTAC+TGG 0.340831 tig0030242:-14151 None:intergenic
ATTTCCTGCTAGTGCTTTGC+CGG 0.341449 tig0030242:+13731 Msa1442920:CDS
AGATGCCAAGATGGCTTGAT+TGG 0.342606 tig0030242:+13897 Msa1442920:CDS
TACTAGCATGGTTGCTGGAC+TGG 0.346162 tig0030242:+13128 Msa1442920:CDS
TGCTTCCACCAGAAATATTA+GGG 0.349156 tig0030242:-12279 None:intergenic
CACCATTGTTTAGGTTAGAT+TGG 0.351569 tig0030242:-13425 None:intergenic
GTTATGCTCCGCGACAAAAC+TGG 0.353541 tig0030242:+13940 Msa1442920:CDS
CCATGGTGCATGTGACTATC+TGG 0.354596 tig0030242:+12150 Msa1442920:CDS
CTTCAGACTTTCAAGATAGT+AGG 0.356157 tig0030242:+13499 Msa1442920:CDS
TACCAGTTGCACCATTGTTT+AGG 0.365444 tig0030242:-13434 None:intergenic
ACAGTGCTGATCGGAATAAA+AGG 0.366820 tig0030242:+12320 Msa1442920:CDS
TATTATTTCCAATTTCGAAT+AGG 0.373342 tig0030242:-10851 None:intergenic
AACCTAAACAATGGTGCAAC+TGG 0.377336 tig0030242:+13432 Msa1442920:CDS
ATTAGGGACCTTATCCTCAT+TGG 0.379637 tig0030242:-12263 None:intergenic
CACAATCACTGCTGCTTTGG+AGG 0.379911 tig0030242:+13857 Msa1442920:CDS
TCTGTTGGATCTGCTTCCTT+GGG 0.381102 tig0030242:+13618 Msa1442920:CDS
GGAAGCCTTGTTATCATCCT+TGG 0.385654 tig0030242:-12242 None:intergenic
TTATCTTGTCCTAGTGTTGT+CGG 0.386313 tig0030242:+12090 Msa1442920:intron
AAATGTAGCAAGCCATTTGC+AGG 0.393120 tig0030242:+12708 Msa1442920:CDS
TATTGAAATTATGCAGACTA+TGG 0.398737 tig0030242:-14612 None:intergenic
CTAAGCTCTTCAAGTCGAAC+AGG 0.403595 tig0030242:-12178 None:intergenic
AAACACAATCACTGCTGCTT+TGG 0.405385 tig0030242:+13854 Msa1442920:CDS
TTTGGCACCTCAACCAGATC+TGG 0.406957 tig0030242:+13204 Msa1442920:CDS
GAGAGTGAAGGGAGTGCAGA+TGG 0.407661 tig0030242:+12403 Msa1442920:CDS
GCTTGCGATCCTTCCAGATC+TGG 0.414334 tig0030242:-13217 None:intergenic
TATCTTGTCCTAGTGTTGTC+GGG 0.415756 tig0030242:+12091 Msa1442920:intron
AACAAATAATTAAAGTCAAA+GGG 0.417835 tig0030242:+10931 Msa1442920:five_prime_UTR
ATAATCGGTGTAGTGAAAAC+TGG 0.418658 tig0030242:+13685 Msa1442920:CDS
TGGATTTAAGTTGCTTGAAT+TGG 0.418723 tig0030242:+11933 Msa1442920:CDS
GGAAACAGAAACATTACTAT+TGG 0.419569 tig0030242:+13639 Msa1442920:CDS
CCTCATCTTCTCCAACTTGT+AGG 0.419938 tig0030242:-14207 None:intergenic
GCAGTTACTACAGCTACTAA+TGG 0.421788 tig0030242:+11829 Msa1442920:intron
CTCAAAACATCAACAACTCC+TGG 0.422296 tig0030242:+13349 Msa1442920:CDS
TTCCTTGCAACAACAGATGA+TGG 0.430350 tig0030242:-13551 None:intergenic
TGGAACCTTAGAAGACATAA+TGG 0.430422 tig0030242:+14256 Msa1442920:CDS
CAAGGCTTCCAATGAGGATA+AGG 0.433857 tig0030242:+12255 Msa1442920:CDS
TAATGGGTGCAATAGTCAAA+AGG 0.436630 tig0030242:+14273 Msa1442920:CDS
TGTTAGCGATAAGAGGGCTT+TGG 0.437040 tig0030242:-13809 None:intergenic
CTTCGGATGAGTGGAATAGA+TGG 0.438392 tig0030242:+13171 Msa1442920:CDS
CATCATACTAGCATGGTTGC+TGG 0.444803 tig0030242:+13123 Msa1442920:CDS
TGGAAGCAATCAGAACATAT+TGG 0.447324 tig0030242:+12294 Msa1442920:CDS
GGGATACAGTGATACAAGTA+TGG 0.449701 tig0030242:+12111 Msa1442920:CDS
AATTCCCAATCAAGCCATCT+TGG 0.450564 tig0030242:-13902 None:intergenic
AACTTAAATCCATCCATGTC+AGG 0.455967 tig0030242:-11922 None:intergenic
GGAACCTTAGAAGACATAAT+GGG 0.455999 tig0030242:+14257 Msa1442920:CDS
AAAGCACTAGCAGGAAATTC+AGG 0.456039 tig0030242:-13726 None:intergenic
TGAATTGGTAGGACTTGAAA+TGG 0.456042 tig0030242:+11948 Msa1442920:CDS
AAACAAATAATTAAAGTCAA+AGG 0.456645 tig0030242:+10930 Msa1442920:five_prime_UTR
TGATACAAGTATGGTATTCA+AGG 0.457007 tig0030242:+12120 Msa1442920:CDS
CTTGCTGAATGCAAATATCA+TGG 0.457929 tig0030242:+11220 Msa1442920:CDS
GCCAAGACTTTGAGACAAGT+TGG 0.461455 tig0030242:-11190 None:intergenic
ATGCAGCTTTCTTAGGAAGA+TGG 0.461869 tig0030242:-10880 None:intergenic
ACTGGACTGTTAGCGATAAG+AGG 0.464251 tig0030242:-13816 None:intergenic
ACTAGCATGGTTGCTGGACT+GGG 0.464924 tig0030242:+13129 Msa1442920:CDS
TTGAAGAGCTTAGAAACATA+TGG 0.466760 tig0030242:+12188 Msa1442920:CDS
CTTGAGCTGATGAATATTGA+AGG 0.466769 tig0030242:+12673 Msa1442920:CDS
GCAAGAACACGCATACCAAC+AGG 0.467353 tig0030242:-11154 None:intergenic
TGTCGCGGAGCATAACTTGA+AGG 0.467950 tig0030242:-13933 None:intergenic
CTTCAATCCTTTGAACTCAC+AGG 0.468279 tig0030242:+14004 Msa1442920:CDS
CCAAGACTTTGAGACAAGTT+GGG 0.470214 tig0030242:-11189 None:intergenic
AGAAGAAACCTCGTGTGGTT+TGG 0.471370 tig0030242:+12449 Msa1442920:CDS
CCTCTCATGTTCAAGCCGGC+TGG 0.473952 tig0030242:-13291 None:intergenic
TGACGAGAATTTCTCAACTT+CGG 0.474747 tig0030242:-14159 None:intergenic
ATCAAGCCATCTTGGCATCT+CGG 0.475852 tig0030242:-13894 None:intergenic
TTAGATTGGTTAAGCTCGGT+TGG 0.477468 tig0030242:-13411 None:intergenic
GTCAGAAATCAGTCTTCTGT+TGG 0.479269 tig0030242:+13603 Msa1442920:CDS
AAGATGATGAAGAGAGTGAA+GGG 0.479274 tig0030242:+12392 Msa1442920:CDS
GCTTTGATTTGCAGGAATCC+AGG 0.479427 tig0030242:-13367 None:intergenic
CTGTGAGTTCAAAGGATTGA+AGG 0.479684 tig0030242:-14003 None:intergenic
TTTCTCAACTTCGGGGTACT+GGG 0.482057 tig0030242:-14150 None:intergenic
CAGCAACCATGCTAGTATGA+TGG 0.485179 tig0030242:-13122 None:intergenic
TTTCCAGACGAAAAGTCAAC+TGG 0.489789 tig0030242:-13834 None:intergenic
CGAGGTTTCTTCTGTGATGA+CGG 0.491161 tig0030242:-12439 None:intergenic
GATGCCAAGATGGCTTGATT+GGG 0.492450 tig0030242:+13898 Msa1442920:CDS
TCCCAAGTTGGATATGTTGA+GGG 0.496240 tig0030242:+14230 Msa1442920:CDS
AACCCTCAACATATCCAACT+TGG 0.496341 tig0030242:-14232 None:intergenic
GCGGTAATGATTCTTACCTT+CGG 0.498032 tig0030242:+13154 Msa1442920:CDS
ATCAAAGGAGAGATGAAGAT+GGG 0.500012 tig0030242:+11116 Msa1442920:CDS
TAGGTTAGATTGGTTAAGCT+CGG 0.501769 tig0030242:-13415 None:intergenic
GTTTGTGCTGTTAATCAACT+TGG 0.503058 tig0030242:+12496 Msa1442920:CDS
ATGGTTGCTGGACTGGGCGG+CGG 0.508918 tig0030242:+13135 Msa1442920:CDS
TTCAGACTTTCAAGATAGTA+GGG 0.510320 tig0030242:+13500 Msa1442920:CDS
AACAGAAACATTACTATTGG+CGG 0.510655 tig0030242:+13642 Msa1442920:CDS
AGCAACCATGCTAGTATGAT+GGG 0.510988 tig0030242:-13121 None:intergenic
TTTAAGTTGCTTGAATTGGT+AGG 0.511254 tig0030242:+11937 Msa1442920:CDS
AGAATTTGTCAATGCCCTAC+TGG 0.521387 tig0030242:-14033 None:intergenic
AATCAAAGGAGAGATGAAGA+TGG 0.521500 tig0030242:+11115 Msa1442920:CDS
ATAGATGGATATGCAGACTT+TGG 0.523223 tig0030242:+13186 Msa1442920:CDS
CCCAACTTGTCTCAAAGTCT+TGG 0.525945 tig0030242:+11189 Msa1442920:CDS
TTATGCTCCGCGACAAAACT+GGG 0.527456 tig0030242:+13941 Msa1442920:CDS
TTAAATCAAATAGATTCCAC+TGG 0.528119 tig0030242:+13465 Msa1442920:CDS
TCACAACAGACACACAATGC+AGG 0.528194 tig0030242:+13576 Msa1442920:CDS
GAAGATGATGAAGAGAGTGA+AGG 0.530545 tig0030242:+12391 Msa1442920:CDS
GTCCCAAGTTGGATATGTTG+AGG 0.530635 tig0030242:+14229 Msa1442920:CDS
AAGGAAGGAGCAAGATGAGG+AGG 0.530715 tig0030242:+12354 Msa1442920:CDS
CTCACAGGTTTGTTCCAGTA+GGG 0.532258 tig0030242:+14019 Msa1442920:CDS
CACGCATACCAACAGGAAAA+CGG 0.532394 tig0030242:-11147 None:intergenic
AGATGGGTGTGGAGAATCAA+AGG 0.532717 tig0030242:+11101 Msa1442920:intron
AATGGGTGCAATAGTCAAAA+GGG 0.534269 tig0030242:+14274 Msa1442920:CDS
AAACTGGGCAGAAAATAAAC+CGG 0.545815 tig0030242:+13956 Msa1442920:CDS
CAAGAATAAAGACCTGCAAA+TGG 0.545943 tig0030242:-12720 None:intergenic
CACGAATGATGCCTACAAGT+TGG 0.548868 tig0030242:+14196 Msa1442920:CDS
ATAAAAGGCTCGGTAAAAGA+AGG 0.549420 tig0030242:+12335 Msa1442920:CDS
GAGGTTTCTTCTGTGATGAC+GGG 0.558825 tig0030242:-12438 None:intergenic
CAAAGCTCAAGCTTATTACA+TGG 0.559367 tig0030242:+13384 Msa1442920:CDS
GATTCTTACCTTCGGATGAG+TGG 0.560817 tig0030242:+13162 Msa1442920:CDS
CATACCGGCAAAGCACTAGC+AGG 0.561071 tig0030242:-13735 None:intergenic
AAGAAGGAAGGAGCAAGATG+AGG 0.564374 tig0030242:+12351 Msa1442920:CDS
CTACCGAAAACTCCGCTCGA+TGG 0.564638 tig0030242:-13258 None:intergenic
TGTATGAACTTACTGATGAC+AGG 0.566085 tig0030242:-11976 None:intergenic
CAGATAGTCACATGCACCAT+GGG 0.568320 tig0030242:-12149 None:intergenic
AATTCCTCTCATGTTCAAGC+CGG 0.569294 tig0030242:-13295 None:intergenic
AACCATCATCTGTTGTTGCA+AGG 0.571223 tig0030242:+13549 Msa1442920:CDS
GATACAAGTATGGTATTCAA+GGG 0.580166 tig0030242:+12121 Msa1442920:CDS
CTGGACTGTTAGCGATAAGA+GGG 0.580850 tig0030242:-13815 None:intergenic
AGTAATGTTTCTGTTTCCCA+AGG 0.584116 tig0030242:-13634 None:intergenic
ATTTAGTTTAGTTTAGTCGA+CGG 0.585120 tig0030242:+14460 Msa1442920:three_prime_UTR
TAATGTTATTGAGAGGCAGT+TGG 0.591128 tig0030242:-13776 None:intergenic
GTGGCTATGCCTGACATGGA+TGG 0.592957 tig0030242:+11913 Msa1442920:CDS
GATCCTTCCAGATCTGGTTG+AGG 0.592986 tig0030242:-13211 None:intergenic
ACCCTCAACATATCCAACTT+GGG 0.593353 tig0030242:-14231 None:intergenic
GAACAAACCTGTGAGTTCAA+AGG 0.594050 tig0030242:-14011 None:intergenic
GGGGTACTGGGCAACTGACG+TGG 0.594340 tig0030242:-14138 None:intergenic
TTGAGCTGATGAATATTGAA+GGG 0.595042 tig0030242:+12674 Msa1442920:CDS
ACTCCGCTCGATGGATATGA+CGG 0.596427 tig0030242:-13249 None:intergenic
TAGCCACATCACTGATAACC+AGG 0.596968 tig0030242:-11897 None:intergenic
CACAACAGACACACAATGCA+GGG 0.597049 tig0030242:+13577 Msa1442920:CDS
TTATTGAAAGACTTGCATAC+CGG 0.597636 tig0030242:-13750 None:intergenic
AATGTGCCGAGATGCCAAGA+TGG 0.600462 tig0030242:+13888 Msa1442920:CDS
AGGGAGTGCAGATGGAGATG+AGG 0.602885 tig0030242:+12411 Msa1442920:CDS
AAGGTCCCTAATATTTCTGG+TGG 0.603122 tig0030242:+12274 Msa1442920:CDS
AAAGCAGTAATGTTATTGAG+AGG 0.604446 tig0030242:-13783 None:intergenic
GAGAAGATGAGGTCCCAAGT+TGG 0.610844 tig0030242:+14218 Msa1442920:CDS
ACTCACAGGTTTGTTCCAGT+AGG 0.610848 tig0030242:+14018 Msa1442920:CDS
CATCTATTCCACTCATCCGA+AGG 0.612751 tig0030242:-13170 None:intergenic
TGTGAGTTCAAAGGATTGAA+GGG 0.613107 tig0030242:-14002 None:intergenic
TATTGGAGAACAGTGCTGAT+CGG 0.614955 tig0030242:+12311 Msa1442920:CDS
GTATTCAAGGGTGTTACCCA+TGG 0.618028 tig0030242:+12133 Msa1442920:CDS
CCAGATAGTCACATGCACCA+TGG 0.618479 tig0030242:-12150 None:intergenic
GGTAGGCTGAATTCTCCAGC+CGG 0.622126 tig0030242:+13276 Msa1442920:CDS
TGATGTGGCTATGCCTGACA+TGG 0.623238 tig0030242:+11909 Msa1442920:CDS
AACTCCCCATCATACTAGCA+TGG 0.628311 tig0030242:+13116 Msa1442920:CDS
AACCAATCTAACCTAAACAA+TGG 0.629254 tig0030242:+13423 Msa1442920:CDS
GCTGATCGGAATAAAAGGCT+CGG 0.629794 tig0030242:+12325 Msa1442920:CDS
TGGATTGAAAGTTTAGTCTG+CGG 0.631070 tig0030242:+14404 Msa1442920:three_prime_UTR
AAGGCTCGGTAAAAGAAGGA+AGG 0.633186 tig0030242:+12339 Msa1442920:CDS
CCTACAAGTTGGAGAAGATG+AGG 0.646079 tig0030242:+14207 Msa1442920:CDS
TGAAGCAGTTGCAAATCCAG+TGG 0.651314 tig0030242:-13481 None:intergenic
TAATTCCAAGGATGATAACA+AGG 0.654052 tig0030242:+12237 Msa1442920:CDS
CCAGCCGGCTTGAACATGAG+AGG 0.656492 tig0030242:+13291 Msa1442920:CDS
TCAAAGGAGAGATGAAGATG+GGG 0.663775 tig0030242:+11117 Msa1442920:CDS
GCACCTCAACCAGATCTGGA+AGG 0.664461 tig0030242:+13208 Msa1442920:CDS
TGATAACAAGGCTTCCAATG+AGG 0.667904 tig0030242:+12249 Msa1442920:CDS
TCAGGAGACCAAACCACACG+AGG 0.674901 tig0030242:-12457 None:intergenic
ACGAGAATTTCTCAACTTCG+GGG 0.680347 tig0030242:-14157 None:intergenic
TGACCTGGTTATCAGTGATG+TGG 0.683171 tig0030242:+11894 Msa1442920:CDS
AAACAGAAAGAACTATGACC+TGG 0.684794 tig0030242:+11879 Msa1442920:CDS
GCAACCATGCTAGTATGATG+GGG 0.686090 tig0030242:-13120 None:intergenic
AGCATGGTTGCTGGACTGGG+CGG 0.687235 tig0030242:+13132 Msa1442920:CDS
TTGCCGTCATATCCATCGAG+CGG 0.699753 tig0030242:+13246 Msa1442920:CDS
ATCACAGAAGAAACCTCGTG+TGG 0.712689 tig0030242:+12444 Msa1442920:CDS
AAATAAATAAAATGATAACG+CGG 0.727638 tig0030242:-14501 None:intergenic
CGATGGATATGACGGCAATG+TGG 0.745057 tig0030242:-13241 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATATATTTTTTTTTT+AGG + tig0030242:11749-11768 Msa1442920:intron 0.0%
!!! ATATTTTTTTTTTAGGTTTT+TGG + tig0030242:11756-11775 Msa1442920:intron 10.0%
!! TAAAAAATAATTTCATGATT+TGG - tig0030242:12783-12802 None:intergenic 10.0%
!!! TTTTATTTATTTTGGTATAA+CGG + tig0030242:14512-14531 Msa1442920:three_prime_UTR 10.0%
!! AAACAAATAATTAAAGTCAA+AGG + tig0030242:10930-10949 Msa1442920:five_prime_UTR 15.0%
!! AACAAATAATTAAAGTCAAA+GGG + tig0030242:10931-10950 Msa1442920:five_prime_UTR 15.0%
!! TGAACTAAAACATAAAATTA+AGG - tig0030242:11282-11301 None:intergenic 15.0%
!! TTTGAGAAAATCATATAATT+CGG - tig0030242:11449-11468 None:intergenic 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG + tig0030242:11456-11475 Msa1442920:intron 15.0%
!! ATAAATGTTAATTCATCATT+TGG - tig0030242:12871-12890 None:intergenic 15.0%
!!! CTAATTTTTTGGATTATAAT+CGG + tig0030242:13670-13689 Msa1442920:CDS 15.0%
!!! AAATAAATAAAATGATAACG+CGG - tig0030242:14504-14523 None:intergenic 15.0%
!!! CGTTATCATTTTATTTATTT+TGG + tig0030242:14504-14523 Msa1442920:three_prime_UTR 15.0%
!! TGATATAAAAAAGTTAGACA+TGG + tig0030242:10818-10837 Msa1442920:five_prime_UTR 20.0%
!!! ATTATTTTCCTATTCGAAAT+TGG + tig0030242:10843-10862 Msa1442920:five_prime_UTR 20.0%
!! TATTATTTCCAATTTCGAAT+AGG - tig0030242:10854-10873 None:intergenic 20.0%
!!! TCTGTTTTGTTTTGTTTTAT+TGG + tig0030242:11047-11066 Msa1442920:intron 20.0%
!!! TTGTTTCTTTATTTTGAAGA+TGG + tig0030242:11084-11103 Msa1442920:intron 20.0%
!!! TGTTTCTTTATTTTGAAGAT+GGG + tig0030242:11085-11104 Msa1442920:intron 20.0%
!!! TACTAAGTTCTAAAGTAATA+AGG - tig0030242:11331-11350 None:intergenic 20.0%
!! TCTTAAATTATTATACGTGT+CGG - tig0030242:11609-11628 None:intergenic 20.0%
!!! TTACATTGCTATTAGAATTT+AGG + tig0030242:11783-11802 Msa1442920:intron 20.0%
!! CATTCTTCTATTTACAATAA+CGG + tig0030242:12022-12041 Msa1442920:intron 20.0%
!! ATTCTTCTATTTACAATAAC+GGG + tig0030242:12023-12042 Msa1442920:intron 20.0%
!!! TGGAATTAGTTTTTTTCTTT+CGG - tig0030242:12225-12244 None:intergenic 20.0%
!! AAAGAAAAAAACTAATTCCA+AGG + tig0030242:12225-12244 Msa1442920:CDS 20.0%
!!! CATGAGAATAAATCTTTTAT+TGG - tig0030242:12620-12639 None:intergenic 20.0%
!!! ATAATTTCATGATTTGGAAA+AGG - tig0030242:12777-12796 None:intergenic 20.0%
!!! AGTCTACTACATTATTTTTT+TGG + tig0030242:14384-14403 Msa1442920:three_prime_UTR 20.0%
!!! TGAATTTTGAATACTTCTTT+TGG + tig0030242:14540-14559 Msa1442920:three_prime_UTR 20.0%
! AATAATAATGCAGCTTTCTT+AGG - tig0030242:10890-10909 None:intergenic 25.0%
! TTTAGTGTAATCATTTGTGT+CGG + tig0030242:11640-11659 Msa1442920:intron 25.0%
!!! TAGAATTTAGGTTTGATTTG+TGG + tig0030242:11795-11814 Msa1442920:intron 25.0%
! ACAAATTTCTTATGCAAATC+AGG - tig0030242:12478-12497 None:intergenic 25.0%
! ATTTCGTCATAAAAATGAAG+AGG - tig0030242:13012-13031 None:intergenic 25.0%
! ATATAGACTCTATCTGAAAA+AGG + tig0030242:13092-13111 Msa1442920:CDS 25.0%
! TTAAATCAAATAGATTCCAC+TGG + tig0030242:13465-13484 Msa1442920:CDS 25.0%
!! TCTTTTGTTGATCATGTATA+TGG + tig0030242:14110-14129 Msa1442920:CDS 25.0%
!! TCAAAAGGGTATGATTAAAT+TGG + tig0030242:14288-14307 Msa1442920:exon 25.0%
!! ATTTAGTTTAGTTTAGTCGA+CGG + tig0030242:14460-14479 Msa1442920:three_prime_UTR 25.0%
!! TGTATCTAGTACTATTTCTT+TGG + tig0030242:14570-14589 Msa1442920:three_prime_UTR 25.0%
! TATTGAAATTATGCAGACTA+TGG - tig0030242:14615-14634 None:intergenic 25.0%
! TTTTGGTCTAGAAAAAGTGA+AGG + tig0030242:10969-10988 Msa1442920:five_prime_UTR 30.0%
!! AAGTTCTAAAGTAATAAGGC+TGG - tig0030242:11327-11346 None:intergenic 30.0%
TCTCAAATTATTAACGGTGT+TGG + tig0030242:11462-11481 Msa1442920:intron 30.0%
TTGATGCACTAAAAATGTTG+AGG + tig0030242:11854-11873 Msa1442920:CDS 30.0%
TGATGCACTAAAAATGTTGA+GGG + tig0030242:11855-11874 Msa1442920:CDS 30.0%
!! TGGATTTAAGTTGCTTGAAT+TGG + tig0030242:11933-11952 Msa1442920:CDS 30.0%
!! TTTAAGTTGCTTGAATTGGT+AGG + tig0030242:11937-11956 Msa1442920:CDS 30.0%
!! AATAACGGGTTGAATTGAAT+CGG + tig0030242:12037-12056 Msa1442920:intron 30.0%
! ATTGAATCGGTTTATTGACT+CGG + tig0030242:12050-12069 Msa1442920:intron 30.0%
TGATACAAGTATGGTATTCA+AGG + tig0030242:12120-12139 Msa1442920:CDS 30.0%
GATACAAGTATGGTATTCAA+GGG + tig0030242:12121-12140 Msa1442920:CDS 30.0%
TTGAAGAGCTTAGAAACATA+TGG + tig0030242:12188-12207 Msa1442920:CDS 30.0%
TAATTCCAAGGATGATAACA+AGG + tig0030242:12237-12256 Msa1442920:CDS 30.0%
AACAACTTCATATGTAGACA+TGG + tig0030242:12582-12601 Msa1442920:intron 30.0%
! ATCAGCTCAAGTATTTTCTT+CGG - tig0030242:12664-12683 None:intergenic 30.0%
TTGAGCTGATGAATATTGAA+GGG + tig0030242:12674-12693 Msa1442920:CDS 30.0%
AATAAACTTGTCTAGTCAGT+AGG - tig0030242:12957-12976 None:intergenic 30.0%
AACCAATCTAACCTAAACAA+TGG + tig0030242:13423-13442 Msa1442920:CDS 30.0%
TTCAGACTTTCAAGATAGTA+GGG + tig0030242:13500-13519 Msa1442920:CDS 30.0%
GGAAACAGAAACATTACTAT+TGG + tig0030242:13639-13658 Msa1442920:CDS 30.0%
AACAGAAACATTACTATTGG+CGG + tig0030242:13642-13661 Msa1442920:CDS 30.0%
TTATTGAAAGACTTGCATAC+CGG - tig0030242:13753-13772 None:intergenic 30.0%
AAAGCAGTAATGTTATTGAG+AGG - tig0030242:13786-13805 None:intergenic 30.0%
! GGTTTTTGTCACTGTTCTTT+TGG + tig0030242:10952-10971 Msa1442920:five_prime_UTR 35.0%
!!! CTTTATTTTGAAGATGGGTG+TGG + tig0030242:11090-11109 Msa1442920:intron 35.0%
AATCAAAGGAGAGATGAAGA+TGG + tig0030242:11115-11134 Msa1442920:CDS 35.0%
ATCAAAGGAGAGATGAAGAT+GGG + tig0030242:11116-11135 Msa1442920:CDS 35.0%
CTTGCTGAATGCAAATATCA+TGG + tig0030242:11220-11239 Msa1442920:CDS 35.0%
ACAGACACACTATTTCGATT+AGG + tig0030242:11367-11386 Msa1442920:intron 35.0%
GTAACTATATGTGTCAGTGT+CGG - tig0030242:11425-11444 None:intergenic 35.0%
AAATCTATGAAGCACGGATA+CGG - tig0030242:11499-11518 None:intergenic 35.0%
GTAGCAAAATCTATGAAGCA+CGG - tig0030242:11505-11524 None:intergenic 35.0%
AAACAGAAAGAACTATGACC+TGG + tig0030242:11879-11898 Msa1442920:CDS 35.0%
AACTTAAATCCATCCATGTC+AGG - tig0030242:11925-11944 None:intergenic 35.0%
TGAATTGGTAGGACTTGAAA+TGG + tig0030242:11948-11967 Msa1442920:CDS 35.0%
TGTATGAACTTACTGATGAC+AGG - tig0030242:11979-11998 None:intergenic 35.0%
TTATCTTGTCCTAGTGTTGT+CGG + tig0030242:12090-12109 Msa1442920:intron 35.0%
GATAAGGTCCCTAATATTTC+TGG + tig0030242:12271-12290 Msa1442920:CDS 35.0%
TGCTTCCACCAGAAATATTA+GGG - tig0030242:12282-12301 None:intergenic 35.0%
TTGCTTCCACCAGAAATATT+AGG - tig0030242:12283-12302 None:intergenic 35.0%
TGGAAGCAATCAGAACATAT+TGG + tig0030242:12294-12313 Msa1442920:CDS 35.0%
! ATAAAAGGCTCGGTAAAAGA+AGG + tig0030242:12335-12354 Msa1442920:CDS 35.0%
AAGATGATGAAGAGAGTGAA+GGG + tig0030242:12392-12411 Msa1442920:CDS 35.0%
! GTTTGTGCTGTTAATCAACT+TGG + tig0030242:12496-12515 Msa1442920:CDS 35.0%
!! ATTCTCATGTTTGTTGTTGC+AGG + tig0030242:12631-12650 Msa1442920:intron 35.0%
!! TTCTCATGTTTGTTGTTGCA+GGG + tig0030242:12632-12651 Msa1442920:intron 35.0%
CTTGAGCTGATGAATATTGA+AGG + tig0030242:12673-12692 Msa1442920:CDS 35.0%
CAAGAATAAAGACCTGCAAA+TGG - tig0030242:12723-12742 None:intergenic 35.0%
AACGATTATGGTGACTACAA+AGG - tig0030242:12746-12765 None:intergenic 35.0%
AAGGCTAAACAGAACGATTA+TGG - tig0030242:12758-12777 None:intergenic 35.0%
ATAGATGGATATGCAGACTT+TGG + tig0030242:13186-13205 Msa1442920:CDS 35.0%
!!! TTGATGTTTTGAGACTGAAC+AGG - tig0030242:13342-13361 None:intergenic 35.0%
CAAAGCTCAAGCTTATTACA+TGG + tig0030242:13384-13403 Msa1442920:CDS 35.0%
! TAGGTTAGATTGGTTAAGCT+CGG - tig0030242:13418-13437 None:intergenic 35.0%
! CACCATTGTTTAGGTTAGAT+TGG - tig0030242:13428-13447 None:intergenic 35.0%
CTTCAGACTTTCAAGATAGT+AGG + tig0030242:13499-13518 Msa1442920:CDS 35.0%
! AGTAATGTTTCTGTTTCCCA+AGG - tig0030242:13637-13656 None:intergenic 35.0%
!!! TGGCGGTTCTTCTAATTTTT+TGG + tig0030242:13659-13678 Msa1442920:CDS 35.0%
ATAATCGGTGTAGTGAAAAC+TGG + tig0030242:13685-13704 Msa1442920:CDS 35.0%
TAATGTTATTGAGAGGCAGT+TGG - tig0030242:13779-13798 None:intergenic 35.0%
AAACTGGGCAGAAAATAAAC+CGG + tig0030242:13956-13975 Msa1442920:CDS 35.0%
TGTGAGTTCAAAGGATTGAA+GGG - tig0030242:14005-14024 None:intergenic 35.0%
TGACGAGAATTTCTCAACTT+CGG - tig0030242:14162-14181 None:intergenic 35.0%
TGGAACCTTAGAAGACATAA+TGG + tig0030242:14256-14275 Msa1442920:CDS 35.0%
GGAACCTTAGAAGACATAAT+GGG + tig0030242:14257-14276 Msa1442920:CDS 35.0%
! TAATGGGTGCAATAGTCAAA+AGG + tig0030242:14273-14292 Msa1442920:CDS 35.0%
AATGGGTGCAATAGTCAAAA+GGG + tig0030242:14274-14293 Msa1442920:CDS 35.0%
GTAGACTAGAGCAAGAAAAA+AGG - tig0030242:14371-14390 None:intergenic 35.0%
TGGATTGAAAGTTTAGTCTG+CGG + tig0030242:14404-14423 Msa1442920:three_prime_UTR 35.0%
ATGCAGCTTTCTTAGGAAGA+TGG - tig0030242:10883-10902 None:intergenic 40.0%
AGAGCAGAACATAGAGTAAG+AGG + tig0030242:11004-11023 Msa1442920:intron 40.0%
TCAAAGGAGAGATGAAGATG+GGG + tig0030242:11117-11136 Msa1442920:CDS 40.0%
!! CCAAGACTTTGAGACAAGTT+GGG - tig0030242:11192-11211 None:intergenic 40.0%
TCATGTGTCCAAGCTTCATA+GGG - tig0030242:11552-11571 None:intergenic 40.0%
! GTAATCATTTGTGTCGGTGT+CGG + tig0030242:11646-11665 Msa1442920:intron 40.0%
ATCTGGATACACATTATCCG+AGG + tig0030242:11674-11693 Msa1442920:intron 40.0%
GCAGTTACTACAGCTACTAA+TGG + tig0030242:11829-11848 Msa1442920:intron 40.0%
TATCTTGTCCTAGTGTTGTC+GGG + tig0030242:12091-12110 Msa1442920:intron 40.0%
GGGATACAGTGATACAAGTA+TGG + tig0030242:12111-12130 Msa1442920:CDS 40.0%
TGATAACAAGGCTTCCAATG+AGG + tig0030242:12249-12268 Msa1442920:CDS 40.0%
ATTAGGGACCTTATCCTCAT+TGG - tig0030242:12266-12285 None:intergenic 40.0%
!! AAGGTCCCTAATATTTCTGG+TGG + tig0030242:12274-12293 Msa1442920:CDS 40.0%
!! TATTGGAGAACAGTGCTGAT+CGG + tig0030242:12311-12330 Msa1442920:CDS 40.0%
!! ACAGTGCTGATCGGAATAAA+AGG + tig0030242:12320-12339 Msa1442920:CDS 40.0%
GAAGATGATGAAGAGAGTGA+AGG + tig0030242:12391-12410 Msa1442920:CDS 40.0%
!! TCTCATGTTTGTTGTTGCAG+GGG + tig0030242:12633-12652 Msa1442920:intron 40.0%
!!! ATGGCTTGCTACATTTTCTC+TGG - tig0030242:12704-12723 None:intergenic 40.0%
AAATGTAGCAAGCCATTTGC+AGG + tig0030242:12708-12727 Msa1442920:CDS 40.0%
AGCAACCATGCTAGTATGAT+GGG - tig0030242:13124-13143 None:intergenic 40.0%
GCGGTAATGATTCTTACCTT+CGG + tig0030242:13154-13173 Msa1442920:CDS 40.0%
AATTCCTCTCATGTTCAAGC+CGG - tig0030242:13298-13317 None:intergenic 40.0%
CTCAAAACATCAACAACTCC+TGG + tig0030242:13349-13368 Msa1442920:CDS 40.0%
!! AAGCTTGAGCTTTGATTTGC+AGG - tig0030242:13378-13397 None:intergenic 40.0%
! TTAGATTGGTTAAGCTCGGT+TGG - tig0030242:13414-13433 None:intergenic 40.0%
AACCTAAACAATGGTGCAAC+TGG + tig0030242:13432-13451 Msa1442920:CDS 40.0%
TACCAGTTGCACCATTGTTT+AGG - tig0030242:13437-13456 None:intergenic 40.0%
AACCATCATCTGTTGTTGCA+AGG + tig0030242:13549-13568 Msa1442920:CDS 40.0%
TTCCTTGCAACAACAGATGA+TGG - tig0030242:13554-13573 None:intergenic 40.0%
GTCAGAAATCAGTCTTCTGT+TGG + tig0030242:13603-13622 Msa1442920:CDS 40.0%
! AAAGCACTAGCAGGAAATTC+AGG - tig0030242:13729-13748 None:intergenic 40.0%
TTTCCAGACGAAAAGTCAAC+TGG - tig0030242:13837-13856 None:intergenic 40.0%
! AAACACAATCACTGCTGCTT+TGG + tig0030242:13854-13873 Msa1442920:CDS 40.0%
AATTCCCAATCAAGCCATCT+TGG - tig0030242:13905-13924 None:intergenic 40.0%
CTGTGAGTTCAAAGGATTGA+AGG - tig0030242:14006-14025 None:intergenic 40.0%
CTTCAATCCTTTGAACTCAC+AGG + tig0030242:14004-14023 Msa1442920:CDS 40.0%
GAACAAACCTGTGAGTTCAA+AGG - tig0030242:14014-14033 None:intergenic 40.0%
AGAATTTGTCAATGCCCTAC+TGG - tig0030242:14036-14055 None:intergenic 40.0%
! TGCTGCAGACTGTTTTACTT+TGG - tig0030242:14076-14095 None:intergenic 40.0%
ACGAGAATTTCTCAACTTCG+GGG - tig0030242:14160-14179 None:intergenic 40.0%
GACGAGAATTTCTCAACTTC+GGG - tig0030242:14161-14180 None:intergenic 40.0%
! TCCCAAGTTGGATATGTTGA+GGG + tig0030242:14230-14249 Msa1442920:CDS 40.0%
ACCCTCAACATATCCAACTT+GGG - tig0030242:14234-14253 None:intergenic 40.0%
AACCCTCAACATATCCAACT+TGG - tig0030242:14235-14254 None:intergenic 40.0%
! GTTGGATATGTTGAGGGTTT+TGG + tig0030242:14236-14255 Msa1442920:CDS 40.0%
TGCACCCATTATGTCTTCTA+AGG - tig0030242:14264-14283 None:intergenic 40.0%
AGATGGGTGTGGAGAATCAA+AGG + tig0030242:11101-11120 Msa1442920:intron 45.0%
CACGCATACCAACAGGAAAA+CGG - tig0030242:11150-11169 None:intergenic 45.0%
CCCAACTTGTCTCAAAGTCT+TGG + tig0030242:11189-11208 Msa1442920:CDS 45.0%
!! GCCAAGACTTTGAGACAAGT+TGG - tig0030242:11193-11212 None:intergenic 45.0%
! GACTTTTGCCCTATGAAGCT+TGG + tig0030242:11541-11560 Msa1442920:intron 45.0%
GTCATGTGTCCAAGCTTCAT+AGG - tig0030242:11553-11572 None:intergenic 45.0%
! TATTATACGTGTCGGCGTGT+AGG - tig0030242:11601-11620 None:intergenic 45.0%
!! TGTCCGTGCTTGATAGCTTT+TGG + tig0030242:11699-11718 Msa1442920:intron 45.0%
GAGCCAAAAGCTATCAAGCA+CGG - tig0030242:11705-11724 None:intergenic 45.0%
TGACCTGGTTATCAGTGATG+TGG + tig0030242:11894-11913 Msa1442920:CDS 45.0%
TAGCCACATCACTGATAACC+AGG - tig0030242:11900-11919 None:intergenic 45.0%
!! GTATTCAAGGGTGTTACCCA+TGG + tig0030242:12133-12152 Msa1442920:CDS 45.0%
CAGATAGTCACATGCACCAT+GGG - tig0030242:12152-12171 None:intergenic 45.0%
CTAAGCTCTTCAAGTCGAAC+AGG - tig0030242:12181-12200 None:intergenic 45.0%
!! GGAAGCCTTGTTATCATCCT+TGG - tig0030242:12245-12264 None:intergenic 45.0%
CAAGGCTTCCAATGAGGATA+AGG + tig0030242:12255-12274 Msa1442920:CDS 45.0%
GCTGATCGGAATAAAAGGCT+CGG + tig0030242:12325-12344 Msa1442920:CDS 45.0%
! AAGGCTCGGTAAAAGAAGGA+AGG + tig0030242:12339-12358 Msa1442920:CDS 45.0%
AAGAAGGAAGGAGCAAGATG+AGG + tig0030242:12351-12370 Msa1442920:CDS 45.0%
GAGGTTTCTTCTGTGATGAC+GGG - tig0030242:12441-12460 None:intergenic 45.0%
CGAGGTTTCTTCTGTGATGA+CGG - tig0030242:12442-12461 None:intergenic 45.0%
ATCACAGAAGAAACCTCGTG+TGG + tig0030242:12444-12463 Msa1442920:CDS 45.0%
AGAAGAAACCTCGTGTGGTT+TGG + tig0030242:12449-12468 Msa1442920:CDS 45.0%
!! CAAGTCTCAAAAGCGTCAAG+AGG - tig0030242:12916-12935 None:intergenic 45.0%
AACTCCCCATCATACTAGCA+TGG + tig0030242:13116-13135 Msa1442920:CDS 45.0%
GCAACCATGCTAGTATGATG+GGG - tig0030242:13123-13142 None:intergenic 45.0%
CAGCAACCATGCTAGTATGA+TGG - tig0030242:13125-13144 None:intergenic 45.0%
CATCATACTAGCATGGTTGC+TGG + tig0030242:13123-13142 Msa1442920:CDS 45.0%
GATTCTTACCTTCGGATGAG+TGG + tig0030242:13162-13181 Msa1442920:CDS 45.0%
CATCTATTCCACTCATCCGA+AGG - tig0030242:13173-13192 None:intergenic 45.0%
CTTCGGATGAGTGGAATAGA+TGG + tig0030242:13171-13190 Msa1442920:CDS 45.0%
! TATCCATCGAGCGGAGTTTT+CGG + tig0030242:13255-13274 Msa1442920:CDS 45.0%
!! GCTTTGATTTGCAGGAATCC+AGG - tig0030242:13370-13389 None:intergenic 45.0%
TGAAGCAGTTGCAAATCCAG+TGG - tig0030242:13484-13503 None:intergenic 45.0%
TCACAACAGACACACAATGC+AGG + tig0030242:13576-13595 Msa1442920:CDS 45.0%
CACAACAGACACACAATGCA+GGG + tig0030242:13577-13596 Msa1442920:CDS 45.0%
TTCTGTTGGATCTGCTTCCT+TGG + tig0030242:13617-13636 Msa1442920:CDS 45.0%
TCTGTTGGATCTGCTTCCTT+GGG + tig0030242:13618-13637 Msa1442920:CDS 45.0%
ATTTCCTGCTAGTGCTTTGC+CGG + tig0030242:13731-13750 Msa1442920:CDS 45.0%
TGTTAGCGATAAGAGGGCTT+TGG - tig0030242:13812-13831 None:intergenic 45.0%
CTGGACTGTTAGCGATAAGA+GGG - tig0030242:13818-13837 None:intergenic 45.0%
ACTGGACTGTTAGCGATAAG+AGG - tig0030242:13819-13838 None:intergenic 45.0%
!! AGTCCAGTTGACTTTTCGTC+TGG + tig0030242:13831-13850 Msa1442920:CDS 45.0%
ATCAAGCCATCTTGGCATCT+CGG - tig0030242:13897-13916 None:intergenic 45.0%
AGATGCCAAGATGGCTTGAT+TGG + tig0030242:13897-13916 Msa1442920:CDS 45.0%
GATGCCAAGATGGCTTGATT+GGG + tig0030242:13898-13917 Msa1442920:CDS 45.0%
TTATGCTCCGCGACAAAACT+GGG + tig0030242:13941-13960 Msa1442920:CDS 45.0%
!! TTTTCTGCCCAGTTTTGTCG+CGG - tig0030242:13951-13970 None:intergenic 45.0%
!!! CTCGTGTTTTGGCTGTAATC+CGG - tig0030242:13978-13997 None:intergenic 45.0%
! ACTCACAGGTTTGTTCCAGT+AGG + tig0030242:14018-14037 Msa1442920:CDS 45.0%
! CTCACAGGTTTGTTCCAGTA+GGG + tig0030242:14019-14038 Msa1442920:CDS 45.0%
! TTTCTCAACTTCGGGGTACT+GGG - tig0030242:14153-14172 None:intergenic 45.0%
ATTTCTCAACTTCGGGGTAC+TGG - tig0030242:14154-14173 None:intergenic 45.0%
CACGAATGATGCCTACAAGT+TGG + tig0030242:14196-14215 Msa1442920:CDS 45.0%
CCTCATCTTCTCCAACTTGT+AGG - tig0030242:14210-14229 None:intergenic 45.0%
! CCTACAAGTTGGAGAAGATG+AGG + tig0030242:14207-14226 Msa1442920:CDS 45.0%
! GTCCCAAGTTGGATATGTTG+AGG + tig0030242:14229-14248 Msa1442920:CDS 45.0%
! GTCGTTGACCGTTTTCCTGT+TGG + tig0030242:11139-11158 Msa1442920:CDS 50.0%
GCAAGAACACGCATACCAAC+AGG - tig0030242:11157-11176 None:intergenic 50.0%
TTCGATTAGGCATGTCCCAG+TGG + tig0030242:11380-11399 Msa1442920:intron 50.0%
TGGACACATGACACGAACAG+CGG + tig0030242:11561-11580 Msa1442920:intron 50.0%
TATCAAGCACGGACACTCCT+CGG - tig0030242:11694-11713 None:intergenic 50.0%
TGATGTGGCTATGCCTGACA+TGG + tig0030242:11909-11928 Msa1442920:CDS 50.0%
CACTGTATCCCGACAACACT+AGG - tig0030242:12102-12121 None:intergenic 50.0%
CCAGATAGTCACATGCACCA+TGG - tig0030242:12153-12172 None:intergenic 50.0%
CCATGGTGCATGTGACTATC+TGG + tig0030242:12150-12169 Msa1442920:CDS 50.0%
AAGGAAGGAGCAAGATGAGG+AGG + tig0030242:12354-12373 Msa1442920:CDS 50.0%
TACTAGCATGGTTGCTGGAC+TGG + tig0030242:13128-13147 Msa1442920:CDS 50.0%
ACTAGCATGGTTGCTGGACT+GGG + tig0030242:13129-13148 Msa1442920:CDS 50.0%
TTTGGCACCTCAACCAGATC+TGG + tig0030242:13204-13223 Msa1442920:CDS 50.0%
GATCCTTCCAGATCTGGTTG+AGG - tig0030242:13214-13233 None:intergenic 50.0%
CGATGGATATGACGGCAATG+TGG - tig0030242:13244-13263 None:intergenic 50.0%
TTGCCGTCATATCCATCGAG+CGG + tig0030242:13246-13265 Msa1442920:CDS 50.0%
ACTCCGCTCGATGGATATGA+CGG - tig0030242:13252-13271 None:intergenic 50.0%
!! CACAATCACTGCTGCTTTGG+AGG + tig0030242:13857-13876 Msa1442920:CDS 50.0%
TTGGCATCTCGGCACATTTC+TGG - tig0030242:13886-13905 None:intergenic 50.0%
AATGTGCCGAGATGCCAAGA+TGG + tig0030242:13888-13907 Msa1442920:CDS 50.0%
TGTCGCGGAGCATAACTTGA+AGG - tig0030242:13936-13955 None:intergenic 50.0%
GTTATGCTCCGCGACAAAAC+TGG + tig0030242:13940-13959 Msa1442920:CDS 50.0%
! TGAAGGGACGACTCGTGTTT+TGG - tig0030242:13989-14008 None:intergenic 50.0%
GAGAAGATGAGGTCCCAAGT+TGG + tig0030242:14218-14237 Msa1442920:CDS 50.0%
GACACGTGTCTGACACCACT+GGG - tig0030242:11398-11417 None:intergenic 55.0%
GTGGCTATGCCTGACATGGA+TGG + tig0030242:11913-11932 Msa1442920:CDS 55.0%
! GAGAGTGAAGGGAGTGCAGA+TGG + tig0030242:12403-12422 Msa1442920:CDS 55.0%
! AGGGAGTGCAGATGGAGATG+AGG + tig0030242:12411-12430 Msa1442920:CDS 55.0%
TCAGGAGACCAAACCACACG+AGG - tig0030242:12460-12479 None:intergenic 55.0%
GCACCTCAACCAGATCTGGA+AGG + tig0030242:13208-13227 Msa1442920:CDS 55.0%
GCTTGCGATCCTTCCAGATC+TGG - tig0030242:13220-13239 None:intergenic 55.0%
CTACCGAAAACTCCGCTCGA+TGG - tig0030242:13261-13280 None:intergenic 55.0%
! CATCGAGCGGAGTTTTCGGT+AGG + tig0030242:13259-13278 Msa1442920:CDS 55.0%
GGTAGGCTGAATTCTCCAGC+CGG + tig0030242:13276-13295 Msa1442920:CDS 55.0%
! CATACCGGCAAAGCACTAGC+AGG - tig0030242:13738-13757 None:intergenic 55.0%
CGACACGTGTCTGACACCAC+TGG - tig0030242:11399-11418 None:intergenic 60.0%
GGCGTGTAGGTGTCTGTGTC+TGG - tig0030242:11588-11607 None:intergenic 60.0%
!! TGTCGGTGTCGGACGACATC+TGG + tig0030242:11657-11676 Msa1442920:intron 60.0%
! AGCATGGTTGCTGGACTGGG+CGG + tig0030242:13132-13151 Msa1442920:CDS 60.0%
CCTCTCATGTTCAAGCCGGC+TGG - tig0030242:13294-13313 None:intergenic 60.0%
!! CCAGCCGGCTTGAACATGAG+AGG + tig0030242:13291-13310 Msa1442920:CDS 60.0%
! ATGGTTGCTGGACTGGGCGG+CGG + tig0030242:13135-13154 Msa1442920:CDS 65.0%
!! GGGGTACTGGGCAACTGACG+TGG - tig0030242:14141-14160 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0030242 gene 10810 14653 10810 ID=Msa1442920;Name=Msa1442920
tig0030242 mRNA 10810 14653 10810 ID=Msa1442920-mRNA-1;Parent=Msa1442920;Name=Msa1442920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=209|1|1|1|0.8|0.83|6|352|667
tig0030242 exon 10810 11018 10810 ID=Msa1442920-mRNA-1:exon:13610;Parent=Msa1442920-mRNA-1
tig0030242 exon 11103 11241 11103 ID=Msa1442920-mRNA-1:exon:13611;Parent=Msa1442920-mRNA-1
tig0030242 exon 11833 11985 11833 ID=Msa1442920-mRNA-1:exon:13612;Parent=Msa1442920-mRNA-1
tig0030242 exon 12104 12526 12104 ID=Msa1442920-mRNA-1:exon:13613;Parent=Msa1442920-mRNA-1
tig0030242 exon 12653 12729 12653 ID=Msa1442920-mRNA-1:exon:13614;Parent=Msa1442920-mRNA-1
tig0030242 exon 13090 14653 13090 ID=Msa1442920-mRNA-1:exon:13615;Parent=Msa1442920-mRNA-1
tig0030242 five_prime_UTR 10810 11018 10810 ID=Msa1442920-mRNA-1:five_prime_utr;Parent=Msa1442920-mRNA-1
tig0030242 CDS 11103 11241 11103 ID=Msa1442920-mRNA-1:cds;Parent=Msa1442920-mRNA-1
tig0030242 CDS 11833 11985 11833 ID=Msa1442920-mRNA-1:cds;Parent=Msa1442920-mRNA-1
tig0030242 CDS 12104 12526 12104 ID=Msa1442920-mRNA-1:cds;Parent=Msa1442920-mRNA-1
tig0030242 CDS 12653 12729 12653 ID=Msa1442920-mRNA-1:cds;Parent=Msa1442920-mRNA-1
tig0030242 CDS 13090 14301 13090 ID=Msa1442920-mRNA-1:cds;Parent=Msa1442920-mRNA-1
tig0030242 three_prime_UTR 14302 14653 14302 ID=Msa1442920-mRNA-1:three_prime_utr;Parent=Msa1442920-mRNA-1
Gene Sequence

>Msa1442920

ATGGGTGTGGAGAATCAAAGGAGAGATGAAGATGGGGTCGTTGACCGTTTTCCTGTTGGTATGCGTGTTCTTGCTGTTGATGACAACCCAACTTGTCTCAAAGTCTTGGCTAAACTTCTTGCTGAATGCAAATATCATGTTACTACAGCTACTAATGGATTTGATGCACTAAAAATGTTGAGGGAAAACAGAAAGAACTATGACCTGGTTATCAGTGATGTGGCTATGCCTGACATGGATGGATTTAAGTTGCTTGAATTGGTAGGACTTGAAATGGACTTACCTGTCATCATGTTGTCGGGATACAGTGATACAAGTATGGTATTCAAGGGTGTTACCCATGGTGCATGTGACTATCTGGTGAAACCTGTTCGACTTGAAGAGCTTAGAAACATATGGCAACATGTAATCCGAAAGAAAAAAACTAATTCCAAGGATGATAACAAGGCTTCCAATGAGGATAAGGTCCCTAATATTTCTGGTGGAAGCAATCAGAACATATTGGAGAACAGTGCTGATCGGAATAAAAGGCTCGGTAAAAGAAGGAAGGAGCAAGATGAGGAGGAGAAAGAAGAAGAAGAAGATGATGAAGAGAGTGAAGGGAGTGCAGATGGAGATGAGGATGACCCGTCATCACAGAAGAAACCTCGTGTGGTTTGGTCTCCTGATTTGCATAAGAAATTTGTTTGTGCTGTTAATCAACTTGGTGCAGACAGGGCTGTTCCGAAGAAAATACTTGAGCTGATGAATATTGAAGGGATTACCAGAGAAAATGTAGCAAGCCATTTGCAGAAATATAGACTCTATCTGAAAAAGGCAACTCCCCATCATACTAGCATGGTTGCTGGACTGGGCGGCGGTAATGATTCTTACCTTCGGATGAGTGGAATAGATGGATATGCAGACTTTGGCACCTCAACCAGATCTGGAAGGATCGCAAGCACCACATTGCCGTCATATCCATCGAGCGGAGTTTTCGGTAGGCTGAATTCTCCAGCCGGCTTGAACATGAGAGGAATTAATTCTTCAACACTGATTCAGCCTGTTCAGTCTCAAAACATCAACAACTCCTGGATTCCTGCAAATCAAAGCTCAAGCTTATTACATGGCGTTCCAACCGAGCTTAACCAATCTAACCTAAACAATGGTGCAACTGGTATATCGCAGTTAAATCAAATAGATTCCACTGGATTTGCAACTGCTTCAGACTTTCAAGATAGTAGGGCTATTACTAGTTCTAATCAAGTCTCAAACCATCATCTGTTGTTGCAAGGAAATTCACAACAGACACACAATGCAGGGTCAGTCAGAAATCAGTCTTCTGTTGGATCTGCTTCCTTGGGAAACAGAAACATTACTATTGGCGGTTCTTCTAATTTTTTGGATTATAATCGGTGTAGTGAAAACTGGCAAAGTCAAGCTCAGTTACCTGAATTTCCTGCTAGTGCTTTGCCGGTATGCAAGTCTTTCAATAACGACCAACTGCCTCTCAATAACATTACTGCTTTTAACCAAAGCCCTCTTATCGCTAACAGTCCAGTTGACTTTTCGTCTGGAAACACAATCACTGCTGCTTTGGAGGAAGCCAGAAATGTGCCGAGATGCCAAGATGGCTTGATTGGGAATTTTATACAGCCTTCAAGTTATGCTCCGCGACAAAACTGGGCAGAAAATAAACCGGATTACAGCCAAAACACGAGTCGTCCCTTCAATCCTTTGAACTCACAGGTTTGTTCCAGTAGGGCATTGACAAATTCTGCGTCTCACAATATCAACCAAAGTAAAACAGTCTGCAGCAATAGAGTTGATGCATCTTTTGTTGATCATGTATATGGCGCTTCCACGTCAGTTGCCCAGTACCCCGAAGTTGAGAAATTCTCGTCAGACGTACAAGTCAACACGAATGATGCCTACAAGTTGGAGAAGATGAGGTCCCAAGTTGGATATGTTGAGGGTTTTGGAACCTTAGAAGACATAATGGGTGCAATAGTCAAAAGGGTATGA
Protein sequence

>Msa1442920

MGVENQRRDEDGVVDRFPVGMRVLAVDDNPTCLKVLAKLLAECKYHVTTATNGFDALKMLRENRKNYDLVISDVAMPDMDGFKLLELVGLEMDLPVIMLSGYSDTSMVFKGVTHGACDYLVKPVRLEELRNIWQHVIRKKKTNSKDDNKASNEDKVPNISGGSNQNILENSADRNKRLGKRRKEQDEEEKEEEEDDEESEGSADGDEDDPSSQKKPRVVWSPDLHKKFVCAVNQLGADRAVPKKILELMNIEGITRENVASHLQKYRLYLKKATPHHTSMVAGLGGGNDSYLRMSGIDGYADFGTSTRSGRIASTTLPSYPSSGVFGRLNSPAGLNMRGINSSTLIQPVQSQNINNSWIPANQSSSLLHGVPTELNQSNLNNGATGISQLNQIDSTGFATASDFQDSRAITSSNQVSNHHLLLQGNSQQTHNAGSVRNQSSVGSASLGNRNITIGGSSNFLDYNRCSENWQSQAQLPEFPASALPVCKSFNNDQLPLNNITAFNQSPLIANSPVDFSSGNTITAALEEARNVPRCQDGLIGNFIQPSSYAPRQNWAENKPDYSQNTSRPFNPLNSQVCSSRALTNSASHNINQSKTVCSNRVDASFVDHVYGASTSVAQYPEVEKFSSDVQVNTNDAYKLEKMRSQVGYVEGFGTLEDIMGAIVKRV*