Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393430 | XP_003598144.1 | 97.963 | 589 | 12 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393430 | sp|Q8VYC8|RIN2_ARATH | 67.572 | 589 | 180 | 4 | 1 | 589 | 1 | 578 | 0.0 | 827 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393430 | G7IVC2 | 97.963 | 589 | 12 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1184 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028620 | Msa0393430 | 0.825481 | 4.579285e-54 | -8.615850e-47 |
| Msa0032080 | Msa0393430 | 0.816143 | 6.436505e-52 | -8.615850e-47 |
| Msa0051040 | Msa0393430 | 0.815348 | 9.678163e-52 | -8.615850e-47 |
| Msa0065680 | Msa0393430 | -0.802331 | 5.902853e-49 | -8.615850e-47 |
| Msa0078640 | Msa0393430 | 0.801765 | 7.716705e-49 | -8.615850e-47 |
| Msa0079130 | Msa0393430 | 0.802374 | 5.784194e-49 | -8.615850e-47 |
| Msa0089980 | Msa0393430 | 0.800008 | 1.762593e-48 | -8.615850e-47 |
| Msa0090010 | Msa0393430 | 0.801001 | 1.106370e-48 | -8.615850e-47 |
| Msa0101250 | Msa0393430 | 0.815143 | 1.075013e-51 | -8.615850e-47 |
| Msa0124320 | Msa0393430 | 0.825531 | 4.455172e-54 | -8.615850e-47 |
| Msa0126790 | Msa0393430 | 0.833647 | 4.728991e-56 | -8.615850e-47 |
| Msa0130720 | Msa0393430 | 0.807811 | 4.211549e-50 | -8.615850e-47 |
| Msa0139670 | Msa0393430 | 0.805123 | 1.553920e-49 | -8.615850e-47 |
| Msa0160960 | Msa0393430 | 0.804037 | 2.617673e-49 | -8.615850e-47 |
| Msa0168570 | Msa0393430 | 0.800298 | 1.538995e-48 | -8.615850e-47 |
| Msa0171870 | Msa0393430 | 0.825954 | 3.535690e-54 | -8.615850e-47 |
| Msa0172080 | Msa0393430 | 0.858436 | 8.250656e-63 | -8.615850e-47 |
| Msa0183760 | Msa0393430 | 0.802629 | 5.123212e-49 | -8.615850e-47 |
| Msa0189040 | Msa0393430 | 0.805039 | 1.618390e-49 | -8.615850e-47 |
| Msa0189710 | Msa0393430 | 0.807382 | 5.193636e-50 | -8.615850e-47 |
| Msa0198300 | Msa0393430 | 0.832334 | 1.003321e-55 | -8.615850e-47 |
| Msa0199700 | Msa0393430 | 0.804672 | 1.930463e-49 | -8.615850e-47 |
| Msa0202800 | Msa0393430 | 0.816794 | 4.602060e-52 | -8.615850e-47 |
| Msa0220730 | Msa0393430 | 0.808265 | 3.371144e-50 | -8.615850e-47 |
| Msa0231190 | Msa0393430 | 0.801268 | 9.756461e-49 | -8.615850e-47 |
| Msa0232020 | Msa0393430 | 0.840351 | 9.161428e-58 | -8.615850e-47 |
| Msa0232090 | Msa0393430 | 0.806085 | 9.761168e-50 | -8.615850e-47 |
| Msa0232340 | Msa0393430 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
| Msa0236420 | Msa0393430 | 0.807584 | 4.706703e-50 | -8.615850e-47 |
| Msa0371950 | Msa0393430 | 0.815054 | 1.125298e-51 | -8.615850e-47 |
| Msa0382370 | Msa0393430 | 0.841055 | 5.991081e-58 | -8.615850e-47 |
| Msa0389770 | Msa0393430 | 0.803580 | 3.257427e-49 | -8.615850e-47 |
| Msa0393430 | Msa0395980 | 0.835841 | 1.326645e-56 | -8.615850e-47 |
| Msa0393430 | Msa0398200 | 0.836905 | 7.112850e-57 | -8.615850e-47 |
| Msa0393430 | Msa0414140 | 0.821365 | 4.197139e-53 | -8.615850e-47 |
| Msa0393430 | Msa0432160 | 0.854844 | 9.390325e-62 | -8.615850e-47 |
| Msa0393430 | Msa0432670 | 0.804708 | 1.897430e-49 | -8.615850e-47 |
| Msa0393430 | Msa0440510 | 0.808236 | 3.419409e-50 | -8.615850e-47 |
| Msa0393430 | Msa0441370 | 0.830879 | 2.290338e-55 | -8.615850e-47 |
| Msa0393430 | Msa0476680 | 0.857746 | 1.323359e-62 | -8.615850e-47 |
| Msa0393430 | Msa0488780 | 0.861278 | 1.147592e-63 | -8.615850e-47 |
| Msa0393430 | Msa0491000 | 0.816753 | 4.701024e-52 | -8.615850e-47 |
| Msa0393430 | Msa0521010 | 0.860078 | 2.653542e-63 | -8.615850e-47 |
| Msa0393430 | Msa0555320 | 0.805573 | 1.250874e-49 | -8.615850e-47 |
| Msa0393430 | Msa0566750 | 0.804289 | 2.319997e-49 | -8.615850e-47 |
| Msa0393430 | Msa0581400 | 0.804899 | 1.731062e-49 | -8.615850e-47 |
| Msa0393430 | Msa0582180 | 0.804411 | 2.187942e-49 | -8.615850e-47 |
| Msa0393430 | Msa0600450 | 0.802462 | 5.547266e-49 | -8.615850e-47 |
| Msa0393430 | Msa0605370 | 0.800157 | 1.643795e-48 | -8.615850e-47 |
| Msa0393430 | Msa0613110 | 0.826271 | 2.973739e-54 | -8.615850e-47 |
| Msa0393430 | Msa0613340 | 0.808793 | 2.600897e-50 | -8.615850e-47 |
| Msa0393430 | Msa0638350 | 0.806147 | 9.473541e-50 | -8.615850e-47 |
| Msa0393430 | Msa0638360 | 0.815842 | 7.513568e-52 | -8.615850e-47 |
| Msa0393430 | Msa0645530 | 0.809212 | 2.115149e-50 | -8.615850e-47 |
| Msa0393430 | Msa0651560 | 0.810066 | 1.386284e-50 | -8.615850e-47 |
| Msa0393430 | Msa0661630 | 0.804814 | 1.802786e-49 | -8.615850e-47 |
| Msa0393430 | Msa0673120 | 0.814796 | 1.283900e-51 | -8.615850e-47 |
| Msa0393430 | Msa0685090 | 0.804157 | 2.471826e-49 | -8.615850e-47 |
| Msa0393430 | Msa0696850 | 0.815157 | 1.067423e-51 | -8.615850e-47 |
| Msa0393430 | Msa0702720 | 0.807598 | 4.674935e-50 | -8.615850e-47 |
| Msa0393430 | Msa0709120 | 0.803855 | 2.856706e-49 | -8.615850e-47 |
| Msa0393430 | Msa0709270 | 0.804319 | 2.286616e-49 | -8.615850e-47 |
| Msa0393430 | Msa0713510 | 0.800455 | 1.429478e-48 | -8.615850e-47 |
| Msa0393430 | Msa0724170 | 0.812613 | 3.882121e-51 | -8.615850e-47 |
| Msa0393430 | Msa0743870 | 0.803830 | 2.890759e-49 | -8.615850e-47 |
| Msa0393430 | Msa0743930 | 0.807867 | 4.097877e-50 | -8.615850e-47 |
| Msa0393430 | Msa0756380 | 0.837007 | 6.698715e-57 | -8.615850e-47 |
| Msa0393430 | Msa0763890 | 0.820837 | 5.553389e-53 | -8.615850e-47 |
| Msa0393430 | Msa0763920 | 0.836413 | 9.496186e-57 | -8.615850e-47 |
| Msa0393430 | Msa0773690 | 0.805206 | 1.492634e-49 | -8.615850e-47 |
| Msa0393430 | Msa0784480 | 0.808168 | 3.536474e-50 | -8.615850e-47 |
| Msa0393430 | Msa0789560 | 0.808161 | 3.547303e-50 | -8.615850e-47 |
| Msa0393430 | Msa0796300 | 0.821904 | 3.150534e-53 | -8.615850e-47 |
| Msa0393430 | Msa0814600 | 0.800703 | 1.272410e-48 | -8.615850e-47 |
| Msa0393430 | Msa0828240 | 0.800598 | 1.337121e-48 | -8.615850e-47 |
| Msa0393430 | Msa0831850 | 0.803386 | 3.573249e-49 | -8.615850e-47 |
| Msa0393430 | Msa0844110 | 0.824467 | 7.945859e-54 | -8.615850e-47 |
| Msa0393430 | Msa0851360 | 0.804702 | 1.902619e-49 | -8.615850e-47 |
| Msa0393430 | Msa0855870 | 0.807086 | 6.000343e-50 | -8.615850e-47 |
| Msa0393430 | Msa0881350 | 0.807692 | 4.463908e-50 | -8.615850e-47 |
| Msa0393430 | Msa0894710 | 0.800763 | 1.237353e-48 | -8.615850e-47 |
| Msa0393430 | Msa0899970 | 0.846039 | 2.790260e-59 | -8.615850e-47 |
| Msa0393430 | Msa0921420 | 0.829839 | 4.112870e-55 | -8.615850e-47 |
| Msa0393430 | Msa0933760 | 0.803518 | 3.355296e-49 | -8.615850e-47 |
| Msa0393430 | Msa0958030 | 0.807940 | 3.953398e-50 | -8.615850e-47 |
| Msa0393430 | Msa0960390 | 0.820040 | 8.460166e-53 | -8.615850e-47 |
| Msa0393430 | Msa0965080 | 0.849814 | 2.540230e-60 | -8.615850e-47 |
| Msa0393430 | Msa0965290 | 0.844269 | 8.391352e-59 | -8.615850e-47 |
| Msa0393430 | Msa0986510 | 0.800461 | 1.425581e-48 | -8.615850e-47 |
| Msa0393430 | Msa0992580 | 0.807389 | 5.177692e-50 | -8.615850e-47 |
| Msa0393430 | Msa0999680 | 0.844107 | 9.279920e-59 | -8.615850e-47 |
| Msa0393430 | Msa1006010 | -0.845349 | 4.293467e-59 | -8.615850e-47 |
| Msa0393430 | Msa1026480 | 0.832439 | 9.445736e-56 | -8.615850e-47 |
| Msa0393430 | Msa1034500 | 0.831311 | 1.793930e-55 | -8.615850e-47 |
| Msa0393430 | Msa1040980 | 0.801463 | 8.898005e-49 | -8.615850e-47 |
| Msa0393430 | Msa1065430 | 0.803818 | 2.907049e-49 | -8.615850e-47 |
| Msa0393430 | Msa1113180 | 0.821971 | 3.040363e-53 | -8.615850e-47 |
| Msa0393430 | Msa1121110 | 0.836079 | 1.154446e-56 | -8.615850e-47 |
| Msa0393430 | Msa1127380 | 0.836499 | 9.030702e-57 | -8.615850e-47 |
| Msa0393430 | Msa1177560 | 0.832291 | 1.028010e-55 | -8.615850e-47 |
| Msa0393430 | Msa1177780 | 0.813694 | 2.248782e-51 | -8.615850e-47 |
| Msa0393430 | Msa1188180 | 0.822043 | 2.926124e-53 | -8.615850e-47 |
| Msa0393430 | Msa1212050 | 0.811890 | 5.582623e-51 | -8.615850e-47 |
| Msa0393430 | Msa1212130 | 0.830460 | 2.900484e-55 | -8.615850e-47 |
| Msa0393430 | Msa1226460 | 0.805925 | 1.054871e-49 | -8.615850e-47 |
| Msa0393430 | Msa1236440 | 0.811171 | 8.000634e-51 | -8.615850e-47 |
| Msa0393430 | Msa1259860 | 0.829340 | 5.438240e-55 | -8.615850e-47 |
| Msa0393430 | Msa1266670 | 0.809362 | 1.964277e-50 | -8.615850e-47 |
| Msa0393430 | Msa1271130 | 0.809131 | 2.202336e-50 | -8.615850e-47 |
| Msa0393430 | Msa1283740 | 0.825702 | 4.057542e-54 | -8.615850e-47 |
| Msa0393430 | Msa1297530 | 0.824400 | 8.238437e-54 | -8.615850e-47 |
| Msa0393430 | Msa1338400 | 0.816801 | 4.586246e-52 | -8.615850e-47 |
| Msa0393430 | Msa1341840 | 0.813287 | 2.763086e-51 | -8.615850e-47 |
| Msa0393430 | Msa1349450 | 0.805815 | 1.112649e-49 | -8.615850e-47 |
| Msa0393430 | Msa1369920 | -0.811408 | 7.107952e-51 | -8.615850e-47 |
| Msa0393430 | Msa1386890 | 0.843299 | 1.526256e-58 | -8.615850e-47 |
| Msa0393430 | Msa1392210 | 0.840507 | 8.339177e-58 | -8.615850e-47 |
| Msa0393430 | Msa1400930 | 0.839696 | 1.357531e-57 | -8.615850e-47 |
| Msa0393430 | Msa1401460 | 0.838505 | 2.763685e-57 | -8.615850e-47 |
| Msa0393430 | Msa1426910 | 0.803846 | 2.868779e-49 | -8.615850e-47 |
| Msa0393430 | Msa1437730 | 0.800951 | 1.132615e-48 | -8.615850e-47 |
| Msa0393430 | Msa1442920 | 0.801081 | 1.065182e-48 | -8.615850e-47 |
| Msa0393430 | Msa1456230 | 0.807616 | 4.632677e-50 | -8.615850e-47 |
| Msa0393430 | Msa1458680 | 0.813510 | 2.468344e-51 | -8.615850e-47 |
| Msa0393430 | Msa1461370 | 0.806185 | 9.301593e-50 | -8.615850e-47 |
| Msa0393430 | Msa1463030 | 0.808804 | 2.586423e-50 | -8.615850e-47 |
| Msa0240270 | Msa0393430 | 0.809198 | 2.130717e-50 | -8.615850e-47 |
| Msa0240650 | Msa0393430 | 0.820840 | 5.545985e-53 | -8.615850e-47 |
| Msa0241140 | Msa0393430 | 0.814695 | 1.351618e-51 | -8.615850e-47 |
| Msa0264830 | Msa0393430 | 0.808175 | 3.524523e-50 | -8.615850e-47 |
| Msa0270960 | Msa0393430 | 0.807202 | 5.670755e-50 | -8.615850e-47 |
| Msa0271550 | Msa0393430 | 0.807526 | 4.841879e-50 | -8.615850e-47 |
| Msa0271790 | Msa0393430 | 0.802098 | 6.591898e-49 | -8.615850e-47 |
| Msa0287870 | Msa0393430 | 0.818153 | 2.273749e-52 | -8.615850e-47 |
| Msa0302870 | Msa0393430 | 0.803566 | 3.279509e-49 | -8.615850e-47 |
| Msa0308460 | Msa0393430 | 0.811474 | 6.874586e-51 | -8.615850e-47 |
| Msa0310090 | Msa0393430 | 0.803376 | 3.590465e-49 | -8.615850e-47 |
| Msa0319290 | Msa0393430 | 0.821932 | 3.104332e-53 | -8.615850e-47 |
| Msa0340340 | Msa0393430 | 0.811061 | 8.450390e-51 | -8.615850e-47 |
| Msa0362890 | Msa0393430 | 0.810235 | 1.274904e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393430 | MtrunA17_Chr3g0078661 | 97.963 | 589 | 12 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1184 |
| Msa0393430 | MtrunA17_Chr5g0395481 | 27.855 | 359 | 199 | 11 | 57 | 397 | 29 | 345 | 1.86e-29 | 122 |
| Msa0393430 | MtrunA17_Chr4g0039631 | 26.904 | 394 | 219 | 12 | 57 | 422 | 29 | 381 | 5.09e-25 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0393430 | AT4G25230.3 | 67.572 | 589 | 180 | 4 | 1 | 589 | 1 | 578 | 0.0 | 827 |
| Msa0393430 | AT4G25230.2 | 67.572 | 589 | 180 | 4 | 1 | 589 | 1 | 578 | 0.0 | 827 |
| Msa0393430 | AT4G25230.1 | 67.572 | 589 | 180 | 4 | 1 | 589 | 1 | 578 | 0.0 | 827 |
| Msa0393430 | AT5G51450.1 | 66.214 | 589 | 187 | 5 | 1 | 589 | 1 | 577 | 0.0 | 780 |
| Msa0393430 | AT5G51450.2 | 64.580 | 607 | 185 | 6 | 1 | 589 | 1 | 595 | 0.0 | 768 |
| Msa0393430 | AT1G65040.2 | 26.667 | 360 | 202 | 11 | 57 | 397 | 29 | 345 | 1.48e-28 | 119 |
| Msa0393430 | AT1G65040.3 | 29.545 | 264 | 143 | 8 | 140 | 397 | 48 | 274 | 5.96e-27 | 113 |
| Msa0393430 | AT3G16090.1 | 28.205 | 351 | 185 | 11 | 63 | 397 | 46 | 345 | 8.72e-27 | 114 |
| Msa0393430 | AT1G65040.4 | 25.348 | 359 | 185 | 11 | 57 | 397 | 29 | 322 | 8.15e-23 | 102 |
| Msa0393430 | AT1G65040.6 | 27.757 | 263 | 126 | 8 | 140 | 397 | 1 | 204 | 4.22e-21 | 95.1 |
| Msa0393430 | AT1G65040.1 | 35.976 | 164 | 83 | 6 | 239 | 397 | 20 | 166 | 2.48e-20 | 92.0 |
| Msa0393430 | AT1G65040.5 | 35.976 | 164 | 83 | 6 | 239 | 397 | 46 | 192 | 5.51e-20 | 90.5 |
Find 198 sgRNAs with CRISPR-Local
Find 470 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGGGTATCTTATTTCTTT+TGG | 0.143623 | 3_2:+7511404 | Msa0393430:intron |
| ACTCAGGTTGGTTGCATTCT+TGG | 0.164820 | 3_2:+7515527 | Msa0393430:CDS |
| AGAGAAAATTGCAACATATT+TGG | 0.199811 | 3_2:-7517187 | None:intergenic |
| TATAACTGTAGGTTCTTTAT+TGG | 0.205185 | 3_2:+7514272 | Msa0393430:intron |
| CAACCTTTGATGATGCTTCT+TGG | 0.213908 | 3_2:+7515665 | Msa0393430:CDS |
| TATAGTTGTGTATATAGTTT+AGG | 0.222930 | 3_2:-7517306 | None:intergenic |
| AAGGAAAGACTATTTATATC+TGG | 0.242098 | 3_2:-7510337 | None:intergenic |
| CTTAAATCAGATGGACTAAT+TGG | 0.254906 | 3_2:+7511696 | Msa0393430:CDS |
| CCCTTTGTCCATCATTAATA+TGG | 0.260037 | 3_2:-7511509 | None:intergenic |
| GGCCGTACTTTGTTCTTTAA+AGG | 0.264896 | 3_2:+7513209 | Msa0393430:CDS |
| GAGAATTTAGGCAGAGAAAA+AGG | 0.264949 | 3_2:-7510356 | None:intergenic |
| CACTTTATCAAGCAGGTCTT+TGG | 0.274479 | 3_2:+7513175 | Msa0393430:CDS |
| GTTGCATTCTTGGCCAAATC+AGG | 0.276468 | 3_2:+7515537 | Msa0393430:CDS |
| TGTGAAGTTTATAGCAATTT+CGG | 0.299921 | 3_2:+7511611 | Msa0393430:CDS |
| ATGATGCTTCTTGGAACCTT+TGG | 0.301147 | 3_2:+7515674 | Msa0393430:CDS |
| ATATGAATTGCAGGCCATTT+TGG | 0.312923 | 3_2:+7513834 | Msa0393430:intron |
| GCAATGATAAACCGCATAAA+AGG | 0.319003 | 3_2:+7514557 | Msa0393430:CDS |
| ATAGTTGTGTATATAGTTTA+GGG | 0.325569 | 3_2:-7517305 | None:intergenic |
| TTTGCTAAATTATCATTTGC+AGG | 0.328363 | 3_2:-7515811 | None:intergenic |
| AACCTTAATAAAATCACATT+TGG | 0.335502 | 3_2:-7516855 | None:intergenic |
| TGCATAGATGTTTCAAGCTC+TGG | 0.346925 | 3_2:+7513332 | Msa0393430:intron |
| TCTTTCTCTCTCTGTTGATT+CGG | 0.351492 | 3_2:+7510387 | Msa0393430:five_prime_UTR |
| GATTTCAGTTACTTGACATA+TGG | 0.351948 | 3_2:+7513863 | Msa0393430:CDS |
| TTGGTCATTACTTGTATATA+TGG | 0.354551 | 3_2:+7514361 | Msa0393430:CDS |
| AGCAATTTCGGCGGTTTCTA+CGG | 0.359887 | 3_2:+7511623 | Msa0393430:CDS |
| TTCTCTCCCTTTGTCACAGT+TGG | 0.362025 | 3_2:+7517204 | Msa0393430:three_prime_UTR |
| TGGCCAAATCAGGGTGTTGA+TGG | 0.364216 | 3_2:+7515547 | Msa0393430:CDS |
| GCATTGTTGAGTGTCGGATT+TGG | 0.365198 | 3_2:-7515118 | None:intergenic |
| CCATGACATTGAGTTACCTT+TGG | 0.374744 | 3_2:+7511749 | Msa0393430:CDS |
| GAAGCCTGAGAAGGATTAAT+AGG | 0.380233 | 3_2:-7515697 | None:intergenic |
| AAGAGAAAGAGAGAGAATTT+AGG | 0.382097 | 3_2:-7510368 | None:intergenic |
| GAAATGGTGGTTTACATATA+AGG | 0.383514 | 3_2:+7515776 | Msa0393430:CDS |
| GCTCCATCAACACCCTGATT+TGG | 0.384253 | 3_2:-7515550 | None:intergenic |
| TTGCTATGGCTGAGACTGTT+CGG | 0.384425 | 3_2:+7515839 | Msa0393430:CDS |
| TATCAAGCAGTTTAGTTGTT+CGG | 0.384919 | 3_2:-7513918 | None:intergenic |
| TTGTATATATGGCGGCTTCA+TGG | 0.385653 | 3_2:+7514372 | Msa0393430:CDS |
| CTGAAATCCATGCACCAAAA+TGG | 0.388541 | 3_2:-7513848 | None:intergenic |
| GAGGGTGAGGTAAGGAGCGT+TGG | 0.393013 | 3_2:-7510436 | None:intergenic |
| TTGGCCTATTAATCCTTCTC+AGG | 0.395938 | 3_2:+7515693 | Msa0393430:CDS |
| TGACATATGGATTCATCATT+CGG | 0.402304 | 3_2:+7513876 | Msa0393430:CDS |
| GATCGAATCCGGCACTCATT+TGG | 0.409102 | 3_2:-7515054 | None:intergenic |
| AGCTCTTCAGTGGTTGCATC+AGG | 0.411339 | 3_2:-7514626 | None:intergenic |
| AGATAGCAGAAAATATATAT+AGG | 0.414981 | 3_2:+7516999 | Msa0393430:three_prime_UTR |
| AGGGTGAGGTAAGGAGCGTT+GGG | 0.418128 | 3_2:-7510435 | None:intergenic |
| CTATAAGAAAGTTCTCTATC+TGG | 0.419162 | 3_2:+7517324 | Msa0393430:three_prime_UTR |
| TAAAAGGCTTTATTAGACTA+AGG | 0.420440 | 3_2:+7514573 | Msa0393430:CDS |
| TGCTATGGCTGAGACTGTTC+GGG | 0.421473 | 3_2:+7515840 | Msa0393430:CDS |
| CATGACATTGAGTTACCTTT+GGG | 0.425509 | 3_2:+7511750 | Msa0393430:CDS |
| CGTTAATTATGTCATTTACA+AGG | 0.430759 | 3_2:+7512660 | Msa0393430:CDS |
| GGAGGTTCTACCTCATATTC+CGG | 0.432309 | 3_2:+7515861 | Msa0393430:CDS |
| TCCGGACGACATAATATTCC+AGG | 0.436173 | 3_2:+7515879 | Msa0393430:CDS |
| CTTATCTAGGAGCGCAGGAC+TGG | 0.436821 | 3_2:+7515504 | Msa0393430:intron |
| AAGGCTCAAAGAAAAGTAAC+AGG | 0.437902 | 3_2:-7513707 | None:intergenic |
| GAAGGAGCGGTCGCCTGACT+TGG | 0.439287 | 3_2:-7515730 | None:intergenic |
| GGGAATACTTATCCGGAACT+TGG | 0.439914 | 3_2:+7514302 | Msa0393430:CDS |
| TCACAGTTGGTGTGAGGGGT+GGG | 0.443021 | 3_2:+7517217 | Msa0393430:three_prime_UTR |
| ACATTTATTTGACTACATTC+AGG | 0.451858 | 3_2:-7517051 | None:intergenic |
| TCCACTGGTGTAAGACTGCC+AGG | 0.452628 | 3_2:+7515751 | Msa0393430:CDS |
| TTCCGCTAGTGGTCCAAGTC+AGG | 0.453223 | 3_2:+7515717 | Msa0393430:CDS |
| GTCACAGTTGGTGTGAGGGG+TGG | 0.456310 | 3_2:+7517216 | Msa0393430:three_prime_UTR |
| ATAAATTTATTGAAGAATCA+AGG | 0.457654 | 3_2:+7516889 | Msa0393430:three_prime_UTR |
| ATTTCATAAACTCTGCCCTC+TGG | 0.457661 | 3_2:+7511469 | Msa0393430:five_prime_UTR |
| TTGGGTTTGTATACCACCAT+AGG | 0.461103 | 3_2:+7511768 | Msa0393430:CDS |
| ACCTGGAATATTATGTCGTC+CGG | 0.467248 | 3_2:-7515880 | None:intergenic |
| GGGTTTCTGCAATTATCAAT+CGG | 0.468555 | 3_2:-7510414 | None:intergenic |
| AATCAGATGGACTAATTGGC+TGG | 0.468773 | 3_2:+7511700 | Msa0393430:CDS |
| AGGAAAGACTATTTATATCT+GGG | 0.476596 | 3_2:-7510336 | None:intergenic |
| AAGCAGGTCTTTGGTCAACT+TGG | 0.476603 | 3_2:+7513184 | Msa0393430:CDS |
| CTGTAGGTTCTTTATTGGAA+TGG | 0.478929 | 3_2:+7514277 | Msa0393430:intron |
| TGGCTGGAATTCAATTCACT+TGG | 0.487314 | 3_2:+7511716 | Msa0393430:CDS |
| AATGAAACAAACTCTAGTAC+AGG | 0.490198 | 3_2:+7515001 | Msa0393430:CDS |
| CCTCACACCAACTGTGACAA+AGG | 0.491051 | 3_2:-7517211 | None:intergenic |
| CTTTGTCACAGTTGGTGTGA+GGG | 0.491160 | 3_2:+7517212 | Msa0393430:three_prime_UTR |
| GTAAGACTGCCAGGAGGAAA+TGG | 0.491286 | 3_2:+7515760 | Msa0393430:CDS |
| AATGGAAGGGAATACTTATC+CGG | 0.492575 | 3_2:+7514295 | Msa0393430:CDS |
| TACATATAAGGACCGCTTCA+CGG | 0.492827 | 3_2:+7515788 | Msa0393430:CDS |
| CATCACTCAGCTACCCTCTC+AGG | 0.493368 | 3_2:-7511430 | None:intergenic |
| GCTGAAGTTATTATTAGTAA+TGG | 0.494317 | 3_2:+7511587 | Msa0393430:exon |
| ACAATGCCGAAGGTGTTCCT+TGG | 0.494423 | 3_2:+7515134 | Msa0393430:CDS |
| CAGGCGACCGCTCCTTCCAC+TGG | 0.494953 | 3_2:+7515736 | Msa0393430:CDS |
| TTGCTTATGACAGGAACCTA+TGG | 0.496458 | 3_2:+7514760 | Msa0393430:intron |
| AGCTCTGGCTAGAGATCGAT+TGG | 0.496608 | 3_2:+7513347 | Msa0393430:CDS |
| GCTATCAGAACAGTAGGTCT+CGG | 0.496877 | 3_2:+7515586 | Msa0393430:CDS |
| TTACCTCCAAGGAACACCTT+CGG | 0.500316 | 3_2:-7515140 | None:intergenic |
| TAGTGCTAACACCAATCTCC+TGG | 0.500933 | 3_2:-7511559 | None:intergenic |
| ACTCTGCCCTCTGGTTCCAT+TGG | 0.501081 | 3_2:+7511478 | Msa0393430:five_prime_UTR |
| ATCTTGCGTGTTTGAGATCG+TGG | 0.507271 | 3_2:+7514819 | Msa0393430:CDS |
| GAGGGGTGGGAGAGAGAGTG+AGG | 0.508289 | 3_2:+7517230 | Msa0393430:three_prime_UTR |
| CCTTTGTCACAGTTGGTGTG+AGG | 0.508600 | 3_2:+7517211 | Msa0393430:three_prime_UTR |
| ATGTTGAACCATATTAATGA+TGG | 0.509494 | 3_2:+7511501 | Msa0393430:five_prime_UTR |
| CCTTCTCAGGCTTCCGCTAG+TGG | 0.510241 | 3_2:+7515706 | Msa0393430:CDS |
| TTGAAGTCAGATGAAAATCC+AGG | 0.510577 | 3_2:+7511541 | Msa0393430:five_prime_UTR |
| TATGTCCAGGGTGTGGCAGA+TGG | 0.511444 | 3_2:-7513387 | None:intergenic |
| ATTATGTCGTCCGGAATATG+AGG | 0.511917 | 3_2:-7515871 | None:intergenic |
| CCATATTAATGATGGACAAA+GGG | 0.512209 | 3_2:+7511509 | Msa0393430:five_prime_UTR |
| TTTGACTACATTCAGGACTC+AGG | 0.513482 | 3_2:-7517044 | None:intergenic |
| CAGATGAAAATCCAGGAGAT+TGG | 0.514081 | 3_2:+7511548 | Msa0393430:five_prime_UTR |
| ATCAGTTTACGAGTTTCAGA+AGG | 0.516795 | 3_2:-7512628 | None:intergenic |
| AGGTTCTTTATTGGAATGGA+AGG | 0.516889 | 3_2:+7514281 | Msa0393430:intron |
| GTCATTACTTGTATATATGG+CGG | 0.518434 | 3_2:+7514364 | Msa0393430:CDS |
| AGAAAGGAACGTGCCCAACT+TGG | 0.518510 | 3_2:-7517085 | None:intergenic |
| GAAAATTGCAACATATTTGG+AGG | 0.518589 | 3_2:-7517184 | None:intergenic |
| ACTGTTCTGATAGCAGTAGA+TGG | 0.518649 | 3_2:-7515577 | None:intergenic |
| AAAAGTGGCTTTCGGCATGT+TGG | 0.520638 | 3_2:-7514962 | None:intergenic |
| TTGCATTCTTGGCCAAATCA+GGG | 0.524173 | 3_2:+7515538 | Msa0393430:CDS |
| GACAAGTATACATCTCAGTC+AGG | 0.526090 | 3_2:-7514940 | None:intergenic |
| TTAGAGAAACTTAAATCAGA+TGG | 0.526158 | 3_2:+7511687 | Msa0393430:CDS |
| TATTGCTTTCGAGACACTGC+AGG | 0.527283 | 3_2:+7513734 | Msa0393430:CDS |
| CTTAGAGCTACAATTGTCGT+TGG | 0.527424 | 3_2:+7516913 | Msa0393430:three_prime_UTR |
| TACCTTTAAAGAACAAAGTA+CGG | 0.531458 | 3_2:-7513211 | None:intergenic |
| ATGCCGAAGGTGTTCCTTGG+AGG | 0.534288 | 3_2:+7515137 | Msa0393430:CDS |
| GGAATACTTATCCGGAACTT+GGG | 0.534492 | 3_2:+7514303 | Msa0393430:CDS |
| CTATCAGAACAGTAGGTCTC+GGG | 0.534822 | 3_2:+7515587 | Msa0393430:CDS |
| CCTTCGGCATTGTTGAGTGT+CGG | 0.535969 | 3_2:-7515124 | None:intergenic |
| CCCTCTTTCTAGATCGACTC+AGG | 0.536632 | 3_2:+7510454 | Msa0393430:five_prime_UTR |
| ATATCCTCTTAGCTCTTCAG+TGG | 0.537382 | 3_2:-7514636 | None:intergenic |
| ACGATCTCAAACACGCAAGA+TGG | 0.539779 | 3_2:-7514817 | None:intergenic |
| AGGTCTTTGGTCAACTTGGT+TGG | 0.540663 | 3_2:+7513188 | Msa0393430:CDS |
| TAATATGGTTCAACATCCAA+TGG | 0.545197 | 3_2:-7511494 | None:intergenic |
| TGGGTTTGTATACCACCATA+GGG | 0.545778 | 3_2:+7511769 | Msa0393430:CDS |
| TTTAGCAAATGTGCTTGCTA+TGG | 0.545866 | 3_2:+7515825 | Msa0393430:CDS |
| CTCACACCAACTGTGACAAA+GGG | 0.547780 | 3_2:-7517210 | None:intergenic |
| CCTTCTTAATCTTAGTCTCA+AGG | 0.549610 | 3_2:+7511824 | Msa0393430:CDS |
| TATATGGCGGCTTCATGGCA+TGG | 0.551008 | 3_2:+7514377 | Msa0393430:CDS |
| ATATACACGAAGATATGTCC+AGG | 0.553719 | 3_2:-7513400 | None:intergenic |
| TTGACTACATTCAGGACTCA+GGG | 0.555756 | 3_2:-7517043 | None:intergenic |
| ATTAGACTAAGGATAGCTCT+AGG | 0.556983 | 3_2:+7514584 | Msa0393430:CDS |
| ACAATTCGTCAATAACCCTA+TGG | 0.557624 | 3_2:-7511784 | None:intergenic |
| AGTGTTGGTGGCACAATCAG+TGG | 0.557838 | 3_2:-7513156 | None:intergenic |
| CTTGAAATATATAGCACACA+TGG | 0.558537 | 3_2:+7513672 | Msa0393430:CDS |
| TCTAGAAAGAGGGTGAGGTA+AGG | 0.558730 | 3_2:-7510444 | None:intergenic |
| AGCTACAATTGTCGTTGGAG+AGG | 0.559137 | 3_2:+7516918 | Msa0393430:three_prime_UTR |
| AAAGACAAACAATGACAGAA+AGG | 0.560315 | 3_2:-7517101 | None:intergenic |
| ACTCAGGGTGAACAAAGAAA+AGG | 0.562445 | 3_2:-7517028 | None:intergenic |
| CCTTGAGACTAAGATTAAGA+AGG | 0.563725 | 3_2:-7511824 | None:intergenic |
| ATGAGACATCTTGCATCTGT+CGG | 0.563921 | 3_2:+7515625 | Msa0393430:CDS |
| AATTGTCGTTGGAGAGGCAT+AGG | 0.563927 | 3_2:+7516924 | Msa0393430:three_prime_UTR |
| ACCATATTAATGATGGACAA+AGG | 0.565998 | 3_2:+7511508 | Msa0393430:five_prime_UTR |
| ACCTGAGTCGATCTAGAAAG+AGG | 0.566331 | 3_2:-7510455 | None:intergenic |
| GGTTCTTTATTGGAATGGAA+GGG | 0.567480 | 3_2:+7514282 | Msa0393430:intron |
| AATCAGGGTGTTGATGGAGC+TGG | 0.572135 | 3_2:+7515553 | Msa0393430:CDS |
| ATAGCACTGCATCTACAAGA+TGG | 0.573918 | 3_2:-7514404 | None:intergenic |
| TCAAACACGCAAGATGGAAG+AGG | 0.575860 | 3_2:-7514811 | None:intergenic |
| CTTGCACGCCAAATGAGTGC+CGG | 0.580024 | 3_2:+7515046 | Msa0393430:CDS |
| GAAAAGTAACAGGAACATAG+AGG | 0.580540 | 3_2:-7513697 | None:intergenic |
| CCACCAACACTTTATCAAGC+AGG | 0.580628 | 3_2:+7513168 | Msa0393430:CDS |
| TGTAAACCACCATTTCCTCC+TGG | 0.580699 | 3_2:-7515769 | None:intergenic |
| AGGAGCGCAGGACTGGACTC+AGG | 0.581791 | 3_2:+7515511 | Msa0393430:intron |
| CATCTCCATCTGCCACACCC+TGG | 0.582406 | 3_2:+7513382 | Msa0393430:CDS |
| ATGACAGGAACCTATGGCTA+AGG | 0.582916 | 3_2:+7514766 | Msa0393430:intron |
| ATCATTTGCAGGCCGTGAAG+CGG | 0.586729 | 3_2:-7515800 | None:intergenic |
| TTTGTCACAGTTGGTGTGAG+GGG | 0.587663 | 3_2:+7517213 | Msa0393430:three_prime_UTR |
| ATCAAAGGTTGTCTGAGCAT+AGG | 0.588207 | 3_2:-7515653 | None:intergenic |
| GGGTGAGGTAAGGAGCGTTG+GGG | 0.590545 | 3_2:-7510434 | None:intergenic |
| CGGATTCGATCGTCAAAACT+CGG | 0.591793 | 3_2:+7515066 | Msa0393430:CDS |
| GCTAGACATAACATGCCTAC+AGG | 0.591975 | 3_2:+7515088 | Msa0393430:CDS |
| GTCTCGAAAGCAATACTCAA+AGG | 0.593508 | 3_2:-7513726 | None:intergenic |
| CCACTAGCGGAAGCCTGAGA+AGG | 0.593790 | 3_2:-7515706 | None:intergenic |
| CCTGCTTGATAAAGTGTTGG+TGG | 0.595637 | 3_2:-7513168 | None:intergenic |
| GTCGATCTAGAAAGAGGGTG+AGG | 0.599358 | 3_2:-7510449 | None:intergenic |
| TCCTGGCAGTCTTACACCAG+TGG | 0.599394 | 3_2:-7515752 | None:intergenic |
| GCAACCACTGAAGAGCTAAG+AGG | 0.609666 | 3_2:+7514632 | Msa0393430:CDS |
| ATGAAACAAACTCTAGTACA+GGG | 0.610423 | 3_2:+7515002 | Msa0393430:CDS |
| GCGCAGGACTGGACTCAGGT+TGG | 0.610826 | 3_2:+7515515 | Msa0393430:CDS |
| CGCCTGACTTGGACCACTAG+CGG | 0.611911 | 3_2:-7515719 | None:intergenic |
| TCTACTGCTATCAGAACAGT+AGG | 0.612039 | 3_2:+7515580 | Msa0393430:CDS |
| GGCAGTCTTACACCAGTGGA+AGG | 0.612218 | 3_2:-7515748 | None:intergenic |
| GTTCCAAGAAGCATCATCAA+AGG | 0.612545 | 3_2:-7515668 | None:intergenic |
| ACGAAGATATGTCCAGGGTG+TGG | 0.615696 | 3_2:-7513394 | None:intergenic |
| CCTGAGTCGATCTAGAAAGA+GGG | 0.617855 | 3_2:-7510454 | None:intergenic |
| ATTCATCATTCGGCTTGCAG+TGG | 0.618403 | 3_2:+7513886 | Msa0393430:CDS |
| CTGCTTGATACATTAACCGC+AGG | 0.618547 | 3_2:+7513931 | Msa0393430:CDS |
| TCAGTTTACGAGTTTCAGAA+GGG | 0.618605 | 3_2:-7512627 | None:intergenic |
| GGATTTGGAAACAATCCTGT+AGG | 0.631882 | 3_2:-7515103 | None:intergenic |
| CCAAAGGTAACTCAATGTCA+TGG | 0.635359 | 3_2:-7511749 | None:intergenic |
| GATTGGTGTTAGCACTAGAG+AGG | 0.640269 | 3_2:+7511565 | Msa0393430:five_prime_UTR |
| TCTTACACCAGTGGAAGGAG+CGG | 0.646620 | 3_2:-7515743 | None:intergenic |
| AGAGGGTAGCTGAGTGATGG+TGG | 0.647475 | 3_2:+7511434 | Msa0393430:five_prime_UTR |
| GAGAAGGATTAATAGGCCAA+AGG | 0.655734 | 3_2:-7515690 | None:intergenic |
| TTGAAATATATAGCACACAT+GGG | 0.660600 | 3_2:+7513673 | Msa0393430:CDS |
| AGACTGCCAGGAGGAAATGG+TGG | 0.661112 | 3_2:+7515763 | Msa0393430:CDS |
| TATTAATGATGGACAAAGGG+CGG | 0.662357 | 3_2:+7511512 | Msa0393430:five_prime_UTR |
| TGAAACAAACTCTAGTACAG+GGG | 0.662791 | 3_2:+7515003 | Msa0393430:CDS |
| CCGACACTCAACAATGCCGA+AGG | 0.664560 | 3_2:+7515124 | Msa0393430:CDS |
| TATGGCTGAGACTGTTCGGG+AGG | 0.665136 | 3_2:+7515843 | Msa0393430:CDS |
| TCAACATCCAATGGAACCAG+AGG | 0.665506 | 3_2:-7511485 | None:intergenic |
| CTGAGAGGGTAGCTGAGTGA+TGG | 0.668106 | 3_2:+7511431 | Msa0393430:five_prime_UTR |
| AGACCTGCTTGATAAAGTGT+TGG | 0.670804 | 3_2:-7513171 | None:intergenic |
| TGAATGTAGTCAAATAAATG+TGG | 0.674476 | 3_2:+7517053 | Msa0393430:three_prime_UTR |
| ATGGTGGTATACAAACCCAA+AGG | 0.677582 | 3_2:-7511765 | None:intergenic |
| ATGCTGTACAGGACTTGCAG+CGG | 0.680004 | 3_2:+7516797 | Msa0393430:intron |
| ATTCGTCAATAACCCTATGG+TGG | 0.680473 | 3_2:-7511781 | None:intergenic |
| CAACATCCAATGGAACCAGA+GGG | 0.682440 | 3_2:-7511484 | None:intergenic |
| TATACACGAAGATATGTCCA+GGG | 0.692791 | 3_2:-7513399 | None:intergenic |
| GAAGTTTATAGCAATTTCGG+CGG | 0.708760 | 3_2:+7511614 | Msa0393430:CDS |
| TGGCTAGAGATCGATTGGAG+CGG | 0.719750 | 3_2:+7513352 | Msa0393430:CDS |
| ATTCAAGTTAGATAATGACA+TGG | 0.722339 | 3_2:-7517281 | None:intergenic |
| ACTGGTGTAAGACTGCCAGG+AGG | 0.796600 | 3_2:+7515754 | Msa0393430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTAGTAATTAATTAAC+TGG | - | chr3_2:7510809-7510828 | None:intergenic | 10.0% |
| !! | TATAAAGTATAAATAGATTA+TGG | + | chr3_2:7511876-7511895 | Msa0393430:intron | 10.0% |
| !!! | ATTTTTATTATTTTGTTGAA+AGG | - | chr3_2:7516427-7516446 | None:intergenic | 10.0% |
| !! | TTATTAAGTATTATATTTGA+TGG | + | chr3_2:7516658-7516677 | Msa0393430:intron | 10.0% |
| !!! | TCATTTTTTTTTTTAGGAAA+TGG | - | chr3_2:7510540-7510559 | None:intergenic | 15.0% |
| !! | AATGAATCAAAAAATTCAAA+GGG | - | chr3_2:7510584-7510603 | None:intergenic | 15.0% |
| !! | AAATGAATCAAAAAATTCAA+AGG | - | chr3_2:7510585-7510604 | None:intergenic | 15.0% |
| !!! | TTGAATTTTTTGATTCATTT+TGG | + | chr3_2:7510585-7510604 | Msa0393430:intron | 15.0% |
| !!! | TTTTTCTATTTGGATTTTTT+TGG | + | chr3_2:7511333-7511352 | Msa0393430:intron | 15.0% |
| !! | TGATACAATATATATTTACT+AGG | - | chr3_2:7513027-7513046 | None:intergenic | 15.0% |
| !! | TTTGAAAAGTTTAAATGTAA+TGG | + | chr3_2:7513049-7513068 | Msa0393430:intron | 15.0% |
| !! | TTGAAAAGTTTAAATGTAAT+GGG | + | chr3_2:7513050-7513069 | Msa0393430:intron | 15.0% |
| !!! | AATTGTTATTTATTATGTCA+TGG | + | chr3_2:7513110-7513129 | Msa0393430:intron | 15.0% |
| !!! | ATTATTGTAATTTTATAGCT+TGG | + | chr3_2:7513602-7513621 | Msa0393430:intron | 15.0% |
| !! | AATAAAAATTGAAAGATTTC+AGG | - | chr3_2:7514121-7514140 | None:intergenic | 15.0% |
| !! | CTACATATAAAAAACTAAAA+TGG | - | chr3_2:7515431-7515450 | None:intergenic | 15.0% |
| !! | NNNNNNNNNNAAAACATACC+TGG | - | chr3_2:7515900-7515919 | None:intergenic | 15.0% |
| !! | AACCATTATAGAAAAAAATT+GGG | + | chr3_2:7516223-7516242 | Msa0393430:intron | 15.0% |
| !!! | TTTTCTGCATAATAAAATTA+AGG | - | chr3_2:7516741-7516760 | None:intergenic | 15.0% |
| !!! | GATTTTATTAAGGTTTTATT+TGG | + | chr3_2:7516863-7516882 | Msa0393430:exon | 15.0% |
| !! | ATAAATTTATTGAAGAATCA+AGG | + | chr3_2:7516889-7516908 | Msa0393430:three_prime_UTR | 15.0% |
| !! | TTAGTTAAAATCTCATTGAT+CGG | + | chr3_2:7510691-7510710 | Msa0393430:intron | 20.0% |
| !!! | CTAATTTGTTCTTTCAAAAT+TGG | + | chr3_2:7510830-7510849 | Msa0393430:intron | 20.0% |
| !!! | CATTAAACTCTTTTTCTATT+TGG | + | chr3_2:7511323-7511342 | Msa0393430:intron | 20.0% |
| !!! | TTCATTTTAAACTAAGATAG+AGG | + | chr3_2:7511999-7512018 | Msa0393430:intron | 20.0% |
| !!! | TCATTTTAAACTAAGATAGA+GGG | + | chr3_2:7512000-7512019 | Msa0393430:intron | 20.0% |
| !!! | AGTGTAATTTTCATTCTTTT+AGG | + | chr3_2:7512062-7512081 | Msa0393430:intron | 20.0% |
| !!! | GTGTAATTTTCATTCTTTTA+GGG | + | chr3_2:7512063-7512082 | Msa0393430:intron | 20.0% |
| !!! | TGTAATTTTCATTCTTTTAG+GGG | + | chr3_2:7512064-7512083 | Msa0393430:intron | 20.0% |
| !! | ACATGATATGATAAGTAATA+AGG | - | chr3_2:7512334-7512353 | None:intergenic | 20.0% |
| !!! | ACATGTATTTTTATGAGAAA+AGG | + | chr3_2:7512432-7512451 | Msa0393430:intron | 20.0% |
| !!! | CATGTATTTTTATGAGAAAA+GGG | + | chr3_2:7512433-7512452 | Msa0393430:intron | 20.0% |
| !!! | TACTTTTGAAGTAATTTAGT+AGG | + | chr3_2:7512488-7512507 | Msa0393430:intron | 20.0% |
| !! | ATATACCATGGAAAAAAATA+TGG | - | chr3_2:7512526-7512545 | None:intergenic | 20.0% |
| !! | CAACATATAAAAGGAAAATA+AGG | - | chr3_2:7512855-7512874 | None:intergenic | 20.0% |
| !!! | CTTATTTTCCTTTTATATGT+TGG | + | chr3_2:7512853-7512872 | Msa0393430:intron | 20.0% |
| !! | AATTTATAAGCTAGTTAACA+TGG | + | chr3_2:7512891-7512910 | Msa0393430:intron | 20.0% |
| !!! | CTTAGATTTAATTTTCGTAA+AGG | + | chr3_2:7513561-7513580 | Msa0393430:intron | 20.0% |
| !! | TAATAACTAATCAACTCTAT+TGG | + | chr3_2:7513986-7514005 | Msa0393430:intron | 20.0% |
| !! | AATAACTAATCAACTCTATT+GGG | + | chr3_2:7513987-7514006 | Msa0393430:intron | 20.0% |
| !! | AAGAGAATCATATATAAAAC+AGG | - | chr3_2:7514033-7514052 | None:intergenic | 20.0% |
| !! | AAGAAAGTTGAATGAAAAAA+TGG | - | chr3_2:7514088-7514107 | None:intergenic | 20.0% |
| !!! | GTTCTTAATTTGCATAAATT+TGG | + | chr3_2:7514464-7514483 | Msa0393430:intron | 20.0% |
| !! | AAAAGAAAATCAATAAACAC+AGG | - | chr3_2:7514519-7514538 | None:intergenic | 20.0% |
| !!! | AAATTTAATTTGCTTATGAC+AGG | + | chr3_2:7514751-7514770 | Msa0393430:intron | 20.0% |
| !!! | AAGTAATTTTTTCTGAACTT+TGG | + | chr3_2:7516058-7516077 | Msa0393430:intron | 20.0% |
| !!! | AGTAATTTTTTCTGAACTTT+GGG | + | chr3_2:7516059-7516078 | Msa0393430:intron | 20.0% |
| !! | CAACCATTATAGAAAAAAAT+TGG | + | chr3_2:7516222-7516241 | Msa0393430:intron | 20.0% |
| !! | ACCATTATAGAAAAAAATTG+GGG | + | chr3_2:7516224-7516243 | Msa0393430:intron | 20.0% |
| !! | CTTTAGATTCAATATATATC+AGG | - | chr3_2:7516771-7516790 | None:intergenic | 20.0% |
| !! | AACCTTAATAAAATCACATT+TGG | - | chr3_2:7516858-7516877 | None:intergenic | 20.0% |
| !! | AGATAGCAGAAAATATATAT+AGG | + | chr3_2:7516999-7517018 | Msa0393430:three_prime_UTR | 20.0% |
| !! | ATAGTTGTGTATATAGTTTA+GGG | - | chr3_2:7517308-7517327 | None:intergenic | 20.0% |
| !! | TATAGTTGTGTATATAGTTT+AGG | - | chr3_2:7517309-7517328 | None:intergenic | 20.0% |
| ! | AGGAAAGACTATTTATATCT+GGG | - | chr3_2:7510339-7510358 | None:intergenic | 25.0% |
| ! | AAGGAAAGACTATTTATATC+TGG | - | chr3_2:7510340-7510359 | None:intergenic | 25.0% |
| !!! | TTTTGATTCATTTTGGTTGT+TGG | + | chr3_2:7510592-7510611 | Msa0393430:intron | 25.0% |
| !!! | TTTGATTCATTTTGGTTGTT+GGG | + | chr3_2:7510593-7510612 | Msa0393430:intron | 25.0% |
| !! | TTCTCTAACTTGTATTGAAT+TGG | + | chr3_2:7510748-7510767 | Msa0393430:intron | 25.0% |
| !!! | TTTAGTGCATATGTTTTGAT+TGG | + | chr3_2:7510918-7510937 | Msa0393430:intron | 25.0% |
| ! | ATCCAAATATGTGTAATTAG+TGG | + | chr3_2:7511033-7511052 | Msa0393430:intron | 25.0% |
| ! | AACCACTAATTACACATATT+TGG | - | chr3_2:7511038-7511057 | None:intergenic | 25.0% |
| !! | TGATAGTTCTTTTCAAAAAG+CGG | + | chr3_2:7511208-7511227 | Msa0393430:intron | 25.0% |
| !!! | TTAGGGTATCTTATTTCTTT+TGG | + | chr3_2:7511404-7511423 | Msa0393430:intron | 25.0% |
| ! | ATGTTGAACCATATTAATGA+TGG | + | chr3_2:7511501-7511520 | Msa0393430:five_prime_UTR | 25.0% |
| ! | GCTGAAGTTATTATTAGTAA+TGG | + | chr3_2:7511587-7511606 | Msa0393430:exon | 25.0% |
| ! | TGTGAAGTTTATAGCAATTT+CGG | + | chr3_2:7511611-7511630 | Msa0393430:CDS | 25.0% |
| ! | TTAGAGAAACTTAAATCAGA+TGG | + | chr3_2:7511687-7511706 | Msa0393430:CDS | 25.0% |
| !! | GTAATTTTCATTCTTTTAGG+GGG | + | chr3_2:7512065-7512084 | Msa0393430:intron | 25.0% |
| !!! | TAATTTTCATTCTTTTAGGG+GGG | + | chr3_2:7512066-7512085 | Msa0393430:intron | 25.0% |
| ! | TTTGGATCATTCAAAAGTAA+AGG | - | chr3_2:7512139-7512158 | None:intergenic | 25.0% |
| ! | AATGATCCAAACATAGATTA+TGG | + | chr3_2:7512148-7512167 | Msa0393430:intron | 25.0% |
| ! | AAGAATTTATAGTTCATCCT+AGG | + | chr3_2:7512295-7512314 | Msa0393430:intron | 25.0% |
| ! | TAAGCTAACAAAAGTTGTTA+TGG | + | chr3_2:7512376-7512395 | Msa0393430:intron | 25.0% |
| ! | TTCAAAAGTAAAGAAAGAGA+GGG | - | chr3_2:7512478-7512497 | None:intergenic | 25.0% |
| ! | GAAAGAACAATGTTGATATA+GGG | - | chr3_2:7512556-7512575 | None:intergenic | 25.0% |
| ! | AGAAAGAACAATGTTGATAT+AGG | - | chr3_2:7512557-7512576 | None:intergenic | 25.0% |
| !! | CGTTAATTATGTCATTTACA+AGG | + | chr3_2:7512660-7512679 | Msa0393430:CDS | 25.0% |
| !!! | TTAGTTCTTTTCTTTTTCTG+TGG | + | chr3_2:7512683-7512702 | Msa0393430:intron | 25.0% |
| !! | TGTTATTTATTATGTCATGG+TGG | + | chr3_2:7513113-7513132 | Msa0393430:intron | 25.0% |
| !! | TACCTTTAAAGAACAAAGTA+CGG | - | chr3_2:7513214-7513233 | None:intergenic | 25.0% |
| !!! | AGCATTGTTATTCATTTTCT+TGG | + | chr3_2:7513425-7513444 | Msa0393430:CDS | 25.0% |
| ! | TTTAACATAAATGACAGCTA+GGG | + | chr3_2:7513505-7513524 | Msa0393430:intron | 25.0% |
| ! | TTGAAATATATAGCACACAT+GGG | + | chr3_2:7513673-7513692 | Msa0393430:CDS | 25.0% |
| ! | GGATTTAATTAGATTGTTCA+TGG | + | chr3_2:7513807-7513826 | Msa0393430:intron | 25.0% |
| !! | GATTAGTTATTATAAGTTCC+AGG | - | chr3_2:7513978-7513997 | None:intergenic | 25.0% |
| ! | ATAACTAATCAACTCTATTG+GGG | + | chr3_2:7513988-7514007 | Msa0393430:intron | 25.0% |
| ! | TCACACTAATCAGATTATTT+CGG | - | chr3_2:7514176-7514195 | None:intergenic | 25.0% |
| ! | ATTTGAACTTCCTAATTATG+TGG | + | chr3_2:7514249-7514268 | Msa0393430:intron | 25.0% |
| ! | TACAGTTATACCACATAATT+AGG | - | chr3_2:7514262-7514281 | None:intergenic | 25.0% |
| ! | TAATTATGTGGTATAACTGT+AGG | + | chr3_2:7514261-7514280 | Msa0393430:intron | 25.0% |
| ! | TATAACTGTAGGTTCTTTAT+TGG | + | chr3_2:7514272-7514291 | Msa0393430:intron | 25.0% |
| ! | TTGGTCATTACTTGTATATA+TGG | + | chr3_2:7514361-7514380 | Msa0393430:CDS | 25.0% |
| !!! | TTATTGATTTTCTTTTGAGC+AGG | + | chr3_2:7514523-7514542 | Msa0393430:intron | 25.0% |
| !!! | TAAAAGGCTTTATTAGACTA+AGG | + | chr3_2:7514573-7514592 | Msa0393430:CDS | 25.0% |
| ! | AAATCAGTTCAGAAACATAT+AGG | - | chr3_2:7514905-7514924 | None:intergenic | 25.0% |
| !!! | TATGTTTCTGAACTGATTTT+AGG | + | chr3_2:7514906-7514925 | Msa0393430:intron | 25.0% |
| ! | CAAACACTATAGTAGTAAAA+AGG | + | chr3_2:7515290-7515309 | Msa0393430:intron | 25.0% |
| ! | ACTATAGTAGTAAAAAGGAT+CGG | + | chr3_2:7515295-7515314 | Msa0393430:intron | 25.0% |
| ! | GAGTTATATCCCATATATAT+GGG | - | chr3_2:7515329-7515348 | None:intergenic | 25.0% |
| ! | TGAGTTATATCCCATATATA+TGG | - | chr3_2:7515330-7515349 | None:intergenic | 25.0% |
| ! | CTAAATAAATGAAGACTTGT+AGG | - | chr3_2:7515362-7515381 | None:intergenic | 25.0% |
| ! | TTTGCTAAATTATCATTTGC+AGG | - | chr3_2:7515814-7515833 | None:intergenic | 25.0% |
| ! | AAACATGAGAAAATTGCAAT+GGG | + | chr3_2:7516168-7516187 | Msa0393430:intron | 25.0% |
| !!! | ACCCCAATTTTTTTCTATAA+TGG | - | chr3_2:7516228-7516247 | None:intergenic | 25.0% |
| ! | TGATGATATTCAAATTCTTG+AGG | + | chr3_2:7516388-7516407 | Msa0393430:intron | 25.0% |
| ! | GATGATATTCAAATTCTTGA+GGG | + | chr3_2:7516389-7516408 | Msa0393430:intron | 25.0% |
| ! | TATTTGACAACACAGTTTAA+GGG | + | chr3_2:7516630-7516649 | Msa0393430:intron | 25.0% |
| ! | AAAAATAAGTAACTCCTTCA+AGG | - | chr3_2:7516713-7516732 | None:intergenic | 25.0% |
| !!! | GAAGGAGTTACTTATTTTTT+TGG | + | chr3_2:7516714-7516733 | Msa0393430:intron | 25.0% |
| !! | CTCCAAATGTGATTTTATTA+AGG | + | chr3_2:7516853-7516872 | Msa0393430:exon | 25.0% |
| !! | TATTTTCTGCTATCTTTCTT+GGG | - | chr3_2:7516994-7517013 | None:intergenic | 25.0% |
| !! | ATATTTTCTGCTATCTTTCT+TGG | - | chr3_2:7516995-7517014 | None:intergenic | 25.0% |
| ! | ACATTTATTTGACTACATTC+AGG | - | chr3_2:7517054-7517073 | None:intergenic | 25.0% |
| ! | TGAATGTAGTCAAATAAATG+TGG | + | chr3_2:7517053-7517072 | Msa0393430:three_prime_UTR | 25.0% |
| ! | AGAGAAAATTGCAACATATT+TGG | - | chr3_2:7517190-7517209 | None:intergenic | 25.0% |
| !! | ATTCAAGTTAGATAATGACA+TGG | - | chr3_2:7517284-7517303 | None:intergenic | 25.0% |
| ! | TATCTGGGTCAATAATTTTG+CGG | - | chr3_2:7510324-7510343 | None:intergenic | 30.0% |
| AAGAGAAAGAGAGAGAATTT+AGG | - | chr3_2:7510371-7510390 | None:intergenic | 30.0% | |
| TGCAAATTTCTAATCCTCTT+TGG | + | chr3_2:7510631-7510650 | Msa0393430:intron | 30.0% | |
| GCAAATTTCTAATCCTCTTT+GGG | + | chr3_2:7510632-7510651 | Msa0393430:intron | 30.0% | |
| CAAATTTCTAATCCTCTTTG+GGG | + | chr3_2:7510633-7510652 | Msa0393430:intron | 30.0% | |
| !!! | TTTTAGGGTTCTATACGATT+TGG | + | chr3_2:7510661-7510680 | Msa0393430:intron | 30.0% |
| TTAAAATCTCATTGATCGGT+AGG | + | chr3_2:7510695-7510714 | Msa0393430:intron | 30.0% | |
| GTTCTTTCAAAATTGGTTGT+TGG | + | chr3_2:7510837-7510856 | Msa0393430:intron | 30.0% | |
| !! | TGGAGTTTTAGCAAAATCAA+AGG | + | chr3_2:7510979-7510998 | Msa0393430:intron | 30.0% |
| ATTACACATATTTGGATTGC+CGG | - | chr3_2:7511030-7511049 | None:intergenic | 30.0% | |
| TTTAGTAGTTGAAAGTAGTG+AGG | + | chr3_2:7511082-7511101 | Msa0393430:intron | 30.0% | |
| GTTTAATGAATGTGCATTGA+CGG | - | chr3_2:7511311-7511330 | None:intergenic | 30.0% | |
| TTGTTCATTCTTTCTCTGTT+AGG | + | chr3_2:7511386-7511405 | Msa0393430:intron | 30.0% | |
| TGTTCATTCTTTCTCTGTTA+GGG | + | chr3_2:7511387-7511406 | Msa0393430:intron | 30.0% | |
| TAATATGGTTCAACATCCAA+TGG | - | chr3_2:7511497-7511516 | None:intergenic | 30.0% | |
| !! | ACCATATTAATGATGGACAA+AGG | + | chr3_2:7511508-7511527 | Msa0393430:five_prime_UTR | 30.0% |
| !! | CCATATTAATGATGGACAAA+GGG | + | chr3_2:7511509-7511528 | Msa0393430:five_prime_UTR | 30.0% |
| !! | CTTAAATCAGATGGACTAAT+TGG | + | chr3_2:7511696-7511715 | Msa0393430:CDS | 30.0% |
| CAAGTAGTGTTAAAGTAGAA+TGG | + | chr3_2:7512028-7512047 | Msa0393430:intron | 30.0% | |
| ACTCATCCATAATCTATGTT+TGG | - | chr3_2:7512157-7512176 | None:intergenic | 30.0% | |
| TACTTATCATATCATGTTGC+TGG | + | chr3_2:7512337-7512356 | Msa0393430:intron | 30.0% | |
| TCATAAAAATACATGTCTGC+AGG | - | chr3_2:7512428-7512447 | None:intergenic | 30.0% | |
| TCAAAAGTAAAGAAAGAGAG+GGG | - | chr3_2:7512477-7512496 | None:intergenic | 30.0% | |
| CTTCAAAAGTAAAGAAAGAG+AGG | - | chr3_2:7512479-7512498 | None:intergenic | 30.0% | |
| AAGTAATTTAGTAGGCTACA+AGG | + | chr3_2:7512496-7512515 | Msa0393430:intron | 30.0% | |
| AGTAATTTAGTAGGCTACAA+GGG | + | chr3_2:7512497-7512516 | Msa0393430:intron | 30.0% | |
| AACATTGTTCTTTCTGTTCA+TGG | + | chr3_2:7512562-7512581 | Msa0393430:intron | 30.0% | |
| TAAGGAACACGATGAAAAAA+GGG | - | chr3_2:7512837-7512856 | None:intergenic | 30.0% | |
| ATAAGGAACACGATGAAAAA+AGG | - | chr3_2:7512838-7512857 | None:intergenic | 30.0% | |
| ACACTAAGCCAACATATAAA+AGG | - | chr3_2:7512864-7512883 | None:intergenic | 30.0% | |
| !! | TTATATGTTGGCTTAGTGTT+TGG | + | chr3_2:7512865-7512884 | Msa0393430:intron | 30.0% |
| !! | AGTTTGTTGACTTAGAGATA+TGG | + | chr3_2:7512985-7513004 | Msa0393430:intron | 30.0% |
| ! | ATTTATTATGTCATGGTGGA+TGG | + | chr3_2:7513117-7513136 | Msa0393430:intron | 30.0% |
| ! | GCTGTCATTTATGTTAAACA+AGG | - | chr3_2:7513503-7513522 | None:intergenic | 30.0% |
| GTTTAACATAAATGACAGCT+AGG | + | chr3_2:7513504-7513523 | Msa0393430:intron | 30.0% | |
| TAAATCTAAGCATGCTCAAA+CGG | - | chr3_2:7513551-7513570 | None:intergenic | 30.0% | |
| ! | ACTTCTCTTTTTATGCTTCT+AGG | + | chr3_2:7513637-7513656 | Msa0393430:intron | 30.0% |
| !!! | CTTTTTATGCTTCTAGGATA+AGG | + | chr3_2:7513643-7513662 | Msa0393430:intron | 30.0% |
| CTTGAAATATATAGCACACA+TGG | + | chr3_2:7513672-7513691 | Msa0393430:CDS | 30.0% | |
| GATTTCAGTTACTTGACATA+TGG | + | chr3_2:7513863-7513882 | Msa0393430:CDS | 30.0% | |
| TGACATATGGATTCATCATT+CGG | + | chr3_2:7513876-7513895 | Msa0393430:CDS | 30.0% | |
| TATCAAGCAGTTTAGTTGTT+CGG | - | chr3_2:7513921-7513940 | None:intergenic | 30.0% | |
| TAACTAATCAACTCTATTGG+GGG | + | chr3_2:7513989-7514008 | Msa0393430:intron | 30.0% | |
| TAAAAAATGTGGCCATATCT+AGG | - | chr3_2:7514335-7514354 | None:intergenic | 30.0% | |
| !!! | AGATATGGCCACATTTTTTA+TGG | + | chr3_2:7514335-7514354 | Msa0393430:CDS | 30.0% |
| GTCATTACTTGTATATATGG+CGG | + | chr3_2:7514364-7514383 | Msa0393430:CDS | 30.0% | |
| ! | GTCTAATAAAGCCTTTTATG+CGG | - | chr3_2:7514571-7514590 | None:intergenic | 30.0% |
| !! | TTTCTGAACTGATTTTAGGT+TGG | + | chr3_2:7514910-7514929 | Msa0393430:intron | 30.0% |
| !! | CTAGAGTTTGTTTCATTTTC+AGG | - | chr3_2:7514998-7515017 | None:intergenic | 30.0% |
| AATGAAACAAACTCTAGTAC+AGG | + | chr3_2:7515001-7515020 | Msa0393430:CDS | 30.0% | |
| ATGAAACAAACTCTAGTACA+GGG | + | chr3_2:7515002-7515021 | Msa0393430:CDS | 30.0% | |
| TTGTGTGCAATATGTATAAG+AGG | + | chr3_2:7515228-7515247 | Msa0393430:intron | 30.0% | |
| GAAATGTGTCCCATATATAT+GGG | + | chr3_2:7515317-7515336 | Msa0393430:intron | 30.0% | |
| CAAGTCTTCATTTATTTAGC+TGG | + | chr3_2:7515363-7515382 | Msa0393430:intron | 30.0% | |
| GATTTATTGCAAGATCAGAA+TGG | + | chr3_2:7515396-7515415 | Msa0393430:intron | 30.0% | |
| !!! | GCATATTTTTTTTGCCGATT+TGG | + | chr3_2:7515475-7515494 | Msa0393430:intron | 30.0% |
| TAGATAAGAAAAGGCCAAAT+CGG | - | chr3_2:7515492-7515511 | None:intergenic | 30.0% | |
| GAAATGGTGGTTTACATATA+AGG | + | chr3_2:7515776-7515795 | Msa0393430:CDS | 30.0% | |
| ATGAATGGTATGATAACTGA+TGG | + | chr3_2:7516087-7516106 | Msa0393430:intron | 30.0% | |
| TGAATGGTATGATAACTGAT+GGG | + | chr3_2:7516088-7516107 | Msa0393430:intron | 30.0% | |
| CAAACATGAGAAAATTGCAA+TGG | + | chr3_2:7516167-7516186 | Msa0393430:intron | 30.0% | |
| ATAGATGATAGTCCAATTGT+TGG | + | chr3_2:7516329-7516348 | Msa0393430:intron | 30.0% | |
| ! | ATGCTATAACTTGTACAAGT+TGG | + | chr3_2:7516501-7516520 | Msa0393430:intron | 30.0% |
| TTGTCAAATAGTGACTATTG+AGG | - | chr3_2:7516620-7516639 | None:intergenic | 30.0% | |
| CTATTTGACAACACAGTTTA+AGG | + | chr3_2:7516629-7516648 | Msa0393430:intron | 30.0% | |
| ! | GGCATCATTTTCATGTATAT+AGG | + | chr3_2:7516945-7516964 | Msa0393430:three_prime_UTR | 30.0% |
| AAAGACAAACAATGACAGAA+AGG | - | chr3_2:7517104-7517123 | None:intergenic | 30.0% | |
| GAAAATTGCAACATATTTGG+AGG | - | chr3_2:7517187-7517206 | None:intergenic | 30.0% | |
| CTATAAGAAAGTTCTCTATC+TGG | + | chr3_2:7517324-7517343 | Msa0393430:three_prime_UTR | 30.0% | |
| ! | ATCTGGGTCAATAATTTTGC+GGG | - | chr3_2:7510323-7510342 | None:intergenic | 35.0% |
| GAGAATTTAGGCAGAGAAAA+AGG | - | chr3_2:7510359-7510378 | None:intergenic | 35.0% | |
| ! | TCTTTCTCTCTCTGTTGATT+CGG | + | chr3_2:7510387-7510406 | Msa0393430:five_prime_UTR | 35.0% |
| GGGTTTCTGCAATTATCAAT+CGG | - | chr3_2:7510417-7510436 | None:intergenic | 35.0% | |
| AAAAATTCAAAGGGTAAGCG+AGG | - | chr3_2:7510575-7510594 | None:intergenic | 35.0% | |
| !!! | CTCTTTGGGGTATGATTTTA+GGG | + | chr3_2:7510646-7510665 | Msa0393430:intron | 35.0% |
| !!! | AGTGCATATGTTTTGATTGG+TGG | + | chr3_2:7510921-7510940 | Msa0393430:intron | 35.0% |
| AAAGTTTACACTGACATGCA+TGG | + | chr3_2:7511129-7511148 | Msa0393430:intron | 35.0% | |
| ATCAAACGCTCCATTCTTAT+TGG | - | chr3_2:7511192-7511211 | None:intergenic | 35.0% | |
| ! | TACATGACAAGTTGACAACA+TGG | + | chr3_2:7511248-7511267 | Msa0393430:intron | 35.0% |
| CCCTTTGTCCATCATTAATA+TGG | - | chr3_2:7511512-7511531 | None:intergenic | 35.0% | |
| !! | TATTAATGATGGACAAAGGG+CGG | + | chr3_2:7511512-7511531 | Msa0393430:five_prime_UTR | 35.0% |
| TTGAAGTCAGATGAAAATCC+AGG | + | chr3_2:7511541-7511560 | Msa0393430:five_prime_UTR | 35.0% | |
| GAAGTTTATAGCAATTTCGG+CGG | + | chr3_2:7511614-7511633 | Msa0393430:CDS | 35.0% | |
| !! | TCTACGGTGTTAAGTTTTGT+AGG | + | chr3_2:7511639-7511658 | Msa0393430:CDS | 35.0% |
| CATGACATTGAGTTACCTTT+GGG | + | chr3_2:7511750-7511769 | Msa0393430:CDS | 35.0% | |
| ACAATTCGTCAATAACCCTA+TGG | - | chr3_2:7511787-7511806 | None:intergenic | 35.0% | |
| CCTTGAGACTAAGATTAAGA+AGG | - | chr3_2:7511827-7511846 | None:intergenic | 35.0% | |
| CCTTCTTAATCTTAGTCTCA+AGG | + | chr3_2:7511824-7511843 | Msa0393430:CDS | 35.0% | |
| ATTATGGCATTATGCCCAAT+GGG | + | chr3_2:7511892-7511911 | Msa0393430:intron | 35.0% | |
| ACAAATCAACATGTCCCATT+GGG | - | chr3_2:7511909-7511928 | None:intergenic | 35.0% | |
| GTTTGTATGTTCAGTACTTC+TGG | + | chr3_2:7511933-7511952 | Msa0393430:intron | 35.0% | |
| AGTGTTAAAGTAGAATGGCT+AGG | + | chr3_2:7512033-7512052 | Msa0393430:intron | 35.0% | |
| ! | TAAGTTGGAGTTGTATGTCA+TGG | - | chr3_2:7512234-7512253 | None:intergenic | 35.0% |
| TTATCATATCATGTTGCTGG+TGG | + | chr3_2:7512340-7512359 | Msa0393430:intron | 35.0% | |
| TATCATATCATGTTGCTGGT+GGG | + | chr3_2:7512341-7512360 | Msa0393430:intron | 35.0% | |
| !!! | GGTGTCCATATTTTTTTCCA+TGG | + | chr3_2:7512518-7512537 | Msa0393430:intron | 35.0% |
| TAGGGAAAAACGATATACCA+TGG | - | chr3_2:7512538-7512557 | None:intergenic | 35.0% | |
| TCAGTTTACGAGTTTCAGAA+GGG | - | chr3_2:7512630-7512649 | None:intergenic | 35.0% | |
| ATCAGTTTACGAGTTTCAGA+AGG | - | chr3_2:7512631-7512650 | None:intergenic | 35.0% | |
| ATAGTCTGAATCAGTTTGCA+GGG | - | chr3_2:7512725-7512744 | None:intergenic | 35.0% | |
| AATAGTCTGAATCAGTTTGC+AGG | - | chr3_2:7512726-7512745 | None:intergenic | 35.0% | |
| TATACACGAAGATATGTCCA+GGG | - | chr3_2:7513402-7513421 | None:intergenic | 35.0% | |
| ATATACACGAAGATATGTCC+AGG | - | chr3_2:7513403-7513422 | None:intergenic | 35.0% | |
| !! | TTTTCTTGGTTGATGTTCTC+TGG | + | chr3_2:7513439-7513458 | Msa0393430:CDS | 35.0% |
| CAAGGATTGTATCGAAAAAG+AGG | - | chr3_2:7513485-7513504 | None:intergenic | 35.0% | |
| AAATCTAAGCATGCTCAAAC+GGG | - | chr3_2:7513550-7513569 | None:intergenic | 35.0% | |
| GAAAAGTAACAGGAACATAG+AGG | - | chr3_2:7513700-7513719 | None:intergenic | 35.0% | |
| AAGGCTCAAAGAAAAGTAAC+AGG | - | chr3_2:7513710-7513729 | None:intergenic | 35.0% | |
| ATCTACTCATATCATCATGC+TGG | + | chr3_2:7513786-7513805 | Msa0393430:intron | 35.0% | |
| ! | ATATGAATTGCAGGCCATTT+TGG | + | chr3_2:7513834-7513853 | Msa0393430:intron | 35.0% |
| ! | ACTTTTATCCAAACTACCTG+CGG | - | chr3_2:7513950-7513969 | None:intergenic | 35.0% |
| TTTGGATAAAAGTCTGATCC+TGG | + | chr3_2:7513957-7513976 | Msa0393430:intron | 35.0% | |
| TGATTCTCTTTGCATTACCT+AGG | + | chr3_2:7514043-7514062 | Msa0393430:intron | 35.0% | |
| GTTTCTGCAGACAACATATT+TGG | + | chr3_2:7514141-7514160 | Msa0393430:intron | 35.0% | |
| AGACATGCTATAACTTATCG+AGG | - | chr3_2:7514217-7514236 | None:intergenic | 35.0% | |
| CTGTAGGTTCTTTATTGGAA+TGG | + | chr3_2:7514277-7514296 | Msa0393430:intron | 35.0% | |
| AGGTTCTTTATTGGAATGGA+AGG | + | chr3_2:7514281-7514300 | Msa0393430:intron | 35.0% | |
| ! | CTTGGGATTTTTCCTAGATA+TGG | + | chr3_2:7514320-7514339 | Msa0393430:CDS | 35.0% |
| ACCAAGTGCCATAAAAAATG+TGG | - | chr3_2:7514346-7514365 | None:intergenic | 35.0% | |
| GCAATGATAAACCGCATAAA+AGG | + | chr3_2:7514557-7514576 | Msa0393430:CDS | 35.0% | |
| ATTAGACTAAGGATAGCTCT+AGG | + | chr3_2:7514584-7514603 | Msa0393430:CDS | 35.0% | |
| !!! | ACTGATTTTAGGTTGGATCA+AGG | + | chr3_2:7514917-7514936 | Msa0393430:intron | 35.0% |
| !! | AGTTTGTTTCATTTTCAGGC+CGG | - | chr3_2:7514994-7515013 | None:intergenic | 35.0% |
| TGAAACAAACTCTAGTACAG+GGG | + | chr3_2:7515003-7515022 | Msa0393430:CDS | 35.0% | |
| !!! | TCCTTCTGTCTCTTTTTTTG+TGG | + | chr3_2:7515187-7515206 | Msa0393430:intron | 35.0% |
| TCCACAAAAAAAGAGACAGA+AGG | - | chr3_2:7515191-7515210 | None:intergenic | 35.0% | |
| GGAAATGTGTCCCATATATA+TGG | + | chr3_2:7515316-7515335 | Msa0393430:intron | 35.0% | |
| !! | GATTTGGCCTTTTCTTATCT+AGG | + | chr3_2:7515491-7515510 | Msa0393430:intron | 35.0% |
| ! | TTTAGCAAATGTGCTTGCTA+TGG | + | chr3_2:7515825-7515844 | Msa0393430:CDS | 35.0% |
| GAACTTTGGGTATGTATGAA+TGG | + | chr3_2:7516072-7516091 | Msa0393430:intron | 35.0% | |
| TTTCTCATGTTTGCAACACT+AGG | - | chr3_2:7516160-7516179 | None:intergenic | 35.0% | |
| AGAAAATTGCAATGGGTGAA+CGG | + | chr3_2:7516175-7516194 | Msa0393430:intron | 35.0% | |
| TCTACCATCTTTCCTACTAT+GGG | - | chr3_2:7516254-7516273 | None:intergenic | 35.0% | |
| TTCTACCATCTTTCCTACTA+TGG | - | chr3_2:7516255-7516274 | None:intergenic | 35.0% | |
| ! | GAAATGATGGAAAACTAGGA+TGG | - | chr3_2:7516469-7516488 | None:intergenic | 35.0% |
| ! | GCTAGAAATGATGGAAAACT+AGG | - | chr3_2:7516473-7516492 | None:intergenic | 35.0% |
| ATTCCAAGATCCACAATGTT+TGG | + | chr3_2:7516537-7516556 | Msa0393430:intron | 35.0% | |
| TTCCAAGATCCACAATGTTT+GGG | + | chr3_2:7516538-7516557 | Msa0393430:intron | 35.0% | |
| TATAGTTGTTGAAGCCTTGA+AGG | + | chr3_2:7516696-7516715 | Msa0393430:intron | 35.0% | |
| ! | TAAAGCTTTTGATGCTGTAC+AGG | + | chr3_2:7516786-7516805 | Msa0393430:intron | 35.0% |
| ! | GTTGTTGGGTTTTTCTCGTT+TGG | + | chr3_2:7510607-7510626 | Msa0393430:intron | 40.0% |
| CCTAAAATCATACCCCAAAG+AGG | - | chr3_2:7510648-7510667 | None:intergenic | 40.0% | |
| !!! | CCTCTTTGGGGTATGATTTT+AGG | + | chr3_2:7510645-7510664 | Msa0393430:intron | 40.0% |
| AATCTCATTGATCGGTAGGT+AGG | + | chr3_2:7510699-7510718 | Msa0393430:intron | 40.0% | |
| !!! | GTTTTGATTGGTGGTGACTT+CGG | + | chr3_2:7510930-7510949 | Msa0393430:intron | 40.0% |
| ! | CACGGTGATTTTTGCAACTT+TGG | + | chr3_2:7510959-7510978 | Msa0393430:intron | 40.0% |
| TGTGATTTCGTCAAACTCAC+CGG | + | chr3_2:7511008-7511027 | Msa0393430:intron | 40.0% | |
| GTAAACTTTGATCCCAGAGA+AGG | - | chr3_2:7511118-7511137 | None:intergenic | 40.0% | |
| ACACTGACGTCCAATAAGAA+TGG | + | chr3_2:7511179-7511198 | Msa0393430:intron | 40.0% | |
| ! | ATGACAAGTTGACAACATGG+TGG | + | chr3_2:7511251-7511270 | Msa0393430:intron | 40.0% |
| GACAACATGGTGGTTCTTAT+TGG | + | chr3_2:7511261-7511280 | Msa0393430:intron | 40.0% | |
| AACATGGTGGTTCTTATTGG+AGG | + | chr3_2:7511264-7511283 | Msa0393430:intron | 40.0% | |
| !! | ATTTCTTTTGGAGACCTGAG+AGG | + | chr3_2:7511416-7511435 | Msa0393430:five_prime_UTR | 40.0% |
| !! | TTTCTTTTGGAGACCTGAGA+GGG | + | chr3_2:7511417-7511436 | Msa0393430:five_prime_UTR | 40.0% |
| ATTTCATAAACTCTGCCCTC+TGG | + | chr3_2:7511469-7511488 | Msa0393430:five_prime_UTR | 40.0% | |
| CAGATGAAAATCCAGGAGAT+TGG | + | chr3_2:7511548-7511567 | Msa0393430:five_prime_UTR | 40.0% | |
| !! | AATCAGATGGACTAATTGGC+TGG | + | chr3_2:7511700-7511719 | Msa0393430:CDS | 40.0% |
| TGGCTGGAATTCAATTCACT+TGG | + | chr3_2:7511716-7511735 | Msa0393430:CDS | 40.0% | |
| CCAAAGGTAACTCAATGTCA+TGG | - | chr3_2:7511752-7511771 | None:intergenic | 40.0% | |
| CCATGACATTGAGTTACCTT+TGG | + | chr3_2:7511749-7511768 | Msa0393430:CDS | 40.0% | |
| ATGGTGGTATACAAACCCAA+AGG | - | chr3_2:7511768-7511787 | None:intergenic | 40.0% | |
| TTGGGTTTGTATACCACCAT+AGG | + | chr3_2:7511768-7511787 | Msa0393430:CDS | 40.0% | |
| TGGGTTTGTATACCACCATA+GGG | + | chr3_2:7511769-7511788 | Msa0393430:CDS | 40.0% | |
| ATTCGTCAATAACCCTATGG+TGG | - | chr3_2:7511784-7511803 | None:intergenic | 40.0% | |
| GTCTCAAGGTGAGTTTGTAA+TGG | + | chr3_2:7511838-7511857 | Msa0393430:intron | 40.0% | |
| GATTATGGCATTATGCCCAA+TGG | + | chr3_2:7511891-7511910 | Msa0393430:intron | 40.0% | |
| CACAAATCAACATGTCCCAT+TGG | - | chr3_2:7511910-7511929 | None:intergenic | 40.0% | |
| !! | CAATGGGACATGTTGATTTG+TGG | + | chr3_2:7511908-7511927 | Msa0393430:intron | 40.0% |
| ! | CTTTGTTTCGTCAAGCTTAC+CGG | + | chr3_2:7512203-7512222 | Msa0393430:intron | 40.0% |
| GTTGTATGTCATGGACAAAC+CGG | - | chr3_2:7512225-7512244 | None:intergenic | 40.0% | |
| ! | GAGCGCTTTGGTTTATAAGT+TGG | - | chr3_2:7512249-7512268 | None:intergenic | 40.0% |
| ! | GAGAGGGGTGTAAAGTATTA+TGG | - | chr3_2:7512462-7512481 | None:intergenic | 40.0% |
| TTGATTGCAAGACACTCCAT+TGG | + | chr3_2:7512803-7512822 | Msa0393430:intron | 40.0% | |
| AAGCTAGTTAACATGGTTGC+AGG | + | chr3_2:7512898-7512917 | Msa0393430:intron | 40.0% | |
| AGACCTGCTTGATAAAGTGT+TGG | - | chr3_2:7513174-7513193 | None:intergenic | 40.0% | |
| CACTTTATCAAGCAGGTCTT+TGG | + | chr3_2:7513175-7513194 | Msa0393430:CDS | 40.0% | |
| GGCCGTACTTTGTTCTTTAA+AGG | + | chr3_2:7513209-7513228 | Msa0393430:CDS | 40.0% | |
| TGCATAGATGTTTCAAGCTC+TGG | + | chr3_2:7513332-7513351 | Msa0393430:intron | 40.0% | |
| GTCTCGAAAGCAATACTCAA+AGG | - | chr3_2:7513729-7513748 | None:intergenic | 40.0% | |
| CATGGTGTGATATGAATTGC+AGG | + | chr3_2:7513825-7513844 | Msa0393430:intron | 40.0% | |
| CTGAAATCCATGCACCAAAA+TGG | - | chr3_2:7513851-7513870 | None:intergenic | 40.0% | |
| TACATTAACCGCAGGTAGTT+TGG | + | chr3_2:7513939-7513958 | Msa0393430:intron | 40.0% | |
| CTAGGAAAAATCCCAAGTTC+CGG | - | chr3_2:7514317-7514336 | None:intergenic | 40.0% | |
| !!! | GCCACATTTTTTATGGCACT+TGG | + | chr3_2:7514342-7514361 | Msa0393430:CDS | 40.0% |
| TTGTATATATGGCGGCTTCA+TGG | + | chr3_2:7514372-7514391 | Msa0393430:CDS | 40.0% | |
| ATAGCACTGCATCTACAAGA+TGG | - | chr3_2:7514407-7514426 | None:intergenic | 40.0% | |
| ! | ATATCCTCTTAGCTCTTCAG+TGG | - | chr3_2:7514639-7514658 | None:intergenic | 40.0% |
| TTGCTTATGACAGGAACCTA+TGG | + | chr3_2:7514760-7514779 | Msa0393430:intron | 40.0% | |
| !!! | AGCTTTTTAGCCTTAGCCAT+AGG | - | chr3_2:7514779-7514798 | None:intergenic | 40.0% |
| GACAAGTATACATCTCAGTC+AGG | - | chr3_2:7514943-7514962 | None:intergenic | 40.0% | |
| GGATTTGGAAACAATCCTGT+AGG | - | chr3_2:7515106-7515125 | None:intergenic | 40.0% | |
| ! | GTGTGAAGATTTTACCTCCA+AGG | - | chr3_2:7515154-7515173 | None:intergenic | 40.0% |
| ! | CATTGATTGATTGCTGAGCT+AGG | - | chr3_2:7515266-7515285 | None:intergenic | 40.0% |
| CTAGCTCAGCAATCAATCAA+TGG | + | chr3_2:7515264-7515283 | Msa0393430:intron | 40.0% | |
| TTGCATTCTTGGCCAAATCA+GGG | + | chr3_2:7515538-7515557 | Msa0393430:CDS | 40.0% | |
| ACTGTTCTGATAGCAGTAGA+TGG | - | chr3_2:7515580-7515599 | None:intergenic | 40.0% | |
| TCTACTGCTATCAGAACAGT+AGG | + | chr3_2:7515580-7515599 | Msa0393430:CDS | 40.0% | |
| ATGAGACATCTTGCATCTGT+CGG | + | chr3_2:7515625-7515644 | Msa0393430:CDS | 40.0% | |
| ATCAAAGGTTGTCTGAGCAT+AGG | - | chr3_2:7515656-7515675 | None:intergenic | 40.0% | |
| !! | CAACCTTTGATGATGCTTCT+TGG | + | chr3_2:7515665-7515684 | Msa0393430:CDS | 40.0% |
| !! | GTTCCAAGAAGCATCATCAA+AGG | - | chr3_2:7515671-7515690 | None:intergenic | 40.0% |
| ATGATGCTTCTTGGAACCTT+TGG | + | chr3_2:7515674-7515693 | Msa0393430:CDS | 40.0% | |
| GAGAAGGATTAATAGGCCAA+AGG | - | chr3_2:7515693-7515712 | None:intergenic | 40.0% | |
| TTGGCCTATTAATCCTTCTC+AGG | + | chr3_2:7515693-7515712 | Msa0393430:CDS | 40.0% | |
| GAAGCCTGAGAAGGATTAAT+AGG | - | chr3_2:7515700-7515719 | None:intergenic | 40.0% | |
| TACATATAAGGACCGCTTCA+CGG | + | chr3_2:7515788-7515807 | Msa0393430:CDS | 40.0% | |
| ATTATGTCGTCCGGAATATG+AGG | - | chr3_2:7515874-7515893 | None:intergenic | 40.0% | |
| ACCTGGAATATTATGTCGTC+CGG | - | chr3_2:7515883-7515902 | None:intergenic | 40.0% | |
| TAGTCCCATAGTAGGAAAGA+TGG | + | chr3_2:7516247-7516266 | Msa0393430:intron | 40.0% | |
| AGATGGTAGAATCTCGTTTG+AGG | + | chr3_2:7516264-7516283 | Msa0393430:intron | 40.0% | |
| GATGATAGTCCAATTGTTGG+AGG | + | chr3_2:7516332-7516351 | Msa0393430:intron | 40.0% | |
| TGCTGAACAGCTAGAAATGA+TGG | - | chr3_2:7516482-7516501 | None:intergenic | 40.0% | |
| ! | ACTTGTACAAGTTGGCACTT+AGG | + | chr3_2:7516509-7516528 | Msa0393430:intron | 40.0% |
| CATTGTGGATCTTGGAATCT+AGG | - | chr3_2:7516535-7516554 | None:intergenic | 40.0% | |
| TACCCAAACATTGTGGATCT+TGG | - | chr3_2:7516543-7516562 | None:intergenic | 40.0% | |
| TTTCTGCTACCCAAACATTG+TGG | - | chr3_2:7516550-7516569 | None:intergenic | 40.0% | |
| CTTAGAGCTACAATTGTCGT+TGG | + | chr3_2:7516913-7516932 | Msa0393430:three_prime_UTR | 40.0% | |
| ACTCAGGGTGAACAAAGAAA+AGG | - | chr3_2:7517031-7517050 | None:intergenic | 40.0% | |
| TTGACTACATTCAGGACTCA+GGG | - | chr3_2:7517046-7517065 | None:intergenic | 40.0% | |
| TTTGACTACATTCAGGACTC+AGG | - | chr3_2:7517047-7517066 | None:intergenic | 40.0% | |
| ! | TGTGGTGTTTTTCTCCAAGT+TGG | + | chr3_2:7517071-7517090 | Msa0393430:three_prime_UTR | 40.0% |
| ! | GTGGTGTTTTTCTCCAAGTT+GGG | + | chr3_2:7517072-7517091 | Msa0393430:three_prime_UTR | 40.0% |
| TCTAGAAAGAGGGTGAGGTA+AGG | - | chr3_2:7510447-7510466 | None:intergenic | 45.0% | |
| CCTGAGTCGATCTAGAAAGA+GGG | - | chr3_2:7510457-7510476 | None:intergenic | 45.0% | |
| ACCTGAGTCGATCTAGAAAG+AGG | - | chr3_2:7510458-7510477 | None:intergenic | 45.0% | |
| TGGTGACTTCGGTAGAATCA+CGG | + | chr3_2:7510941-7510960 | Msa0393430:intron | 45.0% | |
| GGTGAGTTTGACGAAATCAC+AGG | - | chr3_2:7511009-7511028 | None:intergenic | 45.0% | |
| CAACATCCAATGGAACCAGA+GGG | - | chr3_2:7511487-7511506 | None:intergenic | 45.0% | |
| TCAACATCCAATGGAACCAG+AGG | - | chr3_2:7511488-7511507 | None:intergenic | 45.0% | |
| TAGTGCTAACACCAATCTCC+TGG | - | chr3_2:7511562-7511581 | None:intergenic | 45.0% | |
| !! | GATTGGTGTTAGCACTAGAG+AGG | + | chr3_2:7511565-7511584 | Msa0393430:five_prime_UTR | 45.0% |
| AGCAATTTCGGCGGTTTCTA+CGG | + | chr3_2:7511623-7511642 | Msa0393430:CDS | 45.0% | |
| !! | TGGGACATGTTGATTTGTGG+TGG | + | chr3_2:7511911-7511930 | Msa0393430:intron | 45.0% |
| AGTACTTCTGGTAGACTACG+TGG | + | chr3_2:7511945-7511964 | Msa0393430:intron | 45.0% | |
| AGCACGAGAAACTCTGCAAA+TGG | - | chr3_2:7511980-7511999 | None:intergenic | 45.0% | |
| TGTTGTGAAGACACCAGAAC+TGG | - | chr3_2:7512276-7512295 | None:intergenic | 45.0% | |
| ATAGCCTGCATGCGATAAGA+AGG | - | chr3_2:7512589-7512608 | None:intergenic | 45.0% | |
| AAAAAGGGATGCCACACCAA+TGG | - | chr3_2:7512822-7512841 | None:intergenic | 45.0% | |
| !! | TTATGTCATGGTGGATGGAC+AGG | + | chr3_2:7513122-7513141 | Msa0393430:intron | 45.0% |
| !! | TATGTCATGGTGGATGGACA+GGG | + | chr3_2:7513123-7513142 | Msa0393430:intron | 45.0% |
| !! | CCTGCTTGATAAAGTGTTGG+TGG | - | chr3_2:7513171-7513190 | None:intergenic | 45.0% |
| CCACCAACACTTTATCAAGC+AGG | + | chr3_2:7513168-7513187 | Msa0393430:CDS | 45.0% | |
| AAGCAGGTCTTTGGTCAACT+TGG | + | chr3_2:7513184-7513203 | Msa0393430:CDS | 45.0% | |
| AGGTCTTTGGTCAACTTGGT+TGG | + | chr3_2:7513188-7513207 | Msa0393430:CDS | 45.0% | |
| ATAAATGACAGCTAGGGCTG+TGG | + | chr3_2:7513511-7513530 | Msa0393430:intron | 45.0% | |
| TATTGCTTTCGAGACACTGC+AGG | + | chr3_2:7513734-7513753 | Msa0393430:CDS | 45.0% | |
| ! | ATTCATCATTCGGCTTGCAG+TGG | + | chr3_2:7513886-7513905 | Msa0393430:CDS | 45.0% |
| CTGCTTGATACATTAACCGC+AGG | + | chr3_2:7513931-7513950 | Msa0393430:CDS | 45.0% | |
| ATACAACACATGCTCTGCCT+AGG | - | chr3_2:7514063-7514082 | None:intergenic | 45.0% | |
| GTTTGCCAAACCTGTCTTTC+TGG | + | chr3_2:7514691-7514710 | Msa0393430:intron | 45.0% | |
| ATCGACCAGAAAGACAGGTT+TGG | - | chr3_2:7514699-7514718 | None:intergenic | 45.0% | |
| ATGACAGGAACCTATGGCTA+AGG | + | chr3_2:7514766-7514785 | Msa0393430:intron | 45.0% | |
| TCAAACACGCAAGATGGAAG+AGG | - | chr3_2:7514814-7514833 | None:intergenic | 45.0% | |
| ACGATCTCAAACACGCAAGA+TGG | - | chr3_2:7514820-7514839 | None:intergenic | 45.0% | |
| ! | ATCTTGCGTGTTTGAGATCG+TGG | + | chr3_2:7514819-7514838 | Msa0393430:CDS | 45.0% |
| AAAAGTGGCTTTCGGCATGT+TGG | - | chr3_2:7514965-7514984 | None:intergenic | 45.0% | |
| !! | CGAGTTTTGACGATCGAATC+CGG | - | chr3_2:7515068-7515087 | None:intergenic | 45.0% |
| CGGATTCGATCGTCAAAACT+CGG | + | chr3_2:7515066-7515085 | Msa0393430:CDS | 45.0% | |
| GCTAGACATAACATGCCTAC+AGG | + | chr3_2:7515088-7515107 | Msa0393430:CDS | 45.0% | |
| !! | GCATTGTTGAGTGTCGGATT+TGG | - | chr3_2:7515121-7515140 | None:intergenic | 45.0% |
| TTACCTCCAAGGAACACCTT+CGG | - | chr3_2:7515143-7515162 | None:intergenic | 45.0% | |
| AGACAGAAGGACATGTAGCA+TGG | - | chr3_2:7515178-7515197 | None:intergenic | 45.0% | |
| CTGCGCTCCTAGATAAGAAA+AGG | - | chr3_2:7515501-7515520 | None:intergenic | 45.0% | |
| !! | CTTTTCTTATCTAGGAGCGC+AGG | + | chr3_2:7515499-7515518 | Msa0393430:intron | 45.0% |
| !! | ACTCAGGTTGGTTGCATTCT+TGG | + | chr3_2:7515527-7515546 | Msa0393430:CDS | 45.0% |
| GTTGCATTCTTGGCCAAATC+AGG | + | chr3_2:7515537-7515556 | Msa0393430:CDS | 45.0% | |
| GCTATCAGAACAGTAGGTCT+CGG | + | chr3_2:7515586-7515605 | Msa0393430:CDS | 45.0% | |
| CTATCAGAACAGTAGGTCTC+GGG | + | chr3_2:7515587-7515606 | Msa0393430:CDS | 45.0% | |
| TGTAAACCACCATTTCCTCC+TGG | - | chr3_2:7515772-7515791 | None:intergenic | 45.0% | |
| TTGCTATGGCTGAGACTGTT+CGG | + | chr3_2:7515839-7515858 | Msa0393430:CDS | 45.0% | |
| GGAGGTTCTACCTCATATTC+CGG | + | chr3_2:7515861-7515880 | Msa0393430:CDS | 45.0% | |
| TCCGGACGACATAATATTCC+AGG | + | chr3_2:7515879-7515898 | Msa0393430:CDS | 45.0% | |
| AATTGGGGTAGTCCCATAGT+AGG | + | chr3_2:7516239-7516258 | Msa0393430:intron | 45.0% | |
| GTCCAATTGTTGGAGGTAGA+TGG | + | chr3_2:7516339-7516358 | Msa0393430:intron | 45.0% | |
| CTCCATCTACCTCCAACAAT+TGG | - | chr3_2:7516344-7516363 | None:intergenic | 45.0% | |
| AGCTACAATTGTCGTTGGAG+AGG | + | chr3_2:7516918-7516937 | Msa0393430:three_prime_UTR | 45.0% | |
| ! | AATTGTCGTTGGAGAGGCAT+AGG | + | chr3_2:7516924-7516943 | Msa0393430:three_prime_UTR | 45.0% |
| TTCTCTCCCTTTGTCACAGT+TGG | + | chr3_2:7517204-7517223 | Msa0393430:three_prime_UTR | 45.0% | |
| CTCACACCAACTGTGACAAA+GGG | - | chr3_2:7517213-7517232 | None:intergenic | 45.0% | |
| ! | CTTTGTCACAGTTGGTGTGA+GGG | + | chr3_2:7517212-7517231 | Msa0393430:three_prime_UTR | 45.0% |
| ! | TTTGTCACAGTTGGTGTGAG+GGG | + | chr3_2:7517213-7517232 | Msa0393430:three_prime_UTR | 45.0% |
| !!! | TAAAAATCATTTTTTTTTTT+AGG | - | chr3_2:7510546-7510565 | None:intergenic | 5.0% |
| GTCGATCTAGAAAGAGGGTG+AGG | - | chr3_2:7510452-7510471 | None:intergenic | 50.0% | |
| ! | CCCTCTTTCTAGATCGACTC+AGG | + | chr3_2:7510454-7510473 | Msa0393430:five_prime_UTR | 50.0% |
| AGGTATGCGATGACCTTCTC+TGG | + | chr3_2:7511102-7511121 | Msa0393430:intron | 50.0% | |
| GGTATGCGATGACCTTCTCT+GGG | + | chr3_2:7511103-7511122 | Msa0393430:intron | 50.0% | |
| AGAACTGGCTATGAGCGCTT+TGG | - | chr3_2:7512261-7512280 | None:intergenic | 50.0% | |
| ! | AAAGCGCTCATAGCCAGTTC+TGG | + | chr3_2:7512260-7512279 | Msa0393430:intron | 50.0% |
| AAGGCTGTCACTCATGTCCT+AGG | - | chr3_2:7512315-7512334 | None:intergenic | 50.0% | |
| TGGTCCTTCTTATCGCATGC+AGG | + | chr3_2:7512582-7512601 | Msa0393430:intron | 50.0% | |
| TGCAAGACACTCCATTGGTG+TGG | + | chr3_2:7512808-7512827 | Msa0393430:intron | 50.0% | |
| !! | ATGTCATGGTGGATGGACAG+GGG | + | chr3_2:7513124-7513143 | Msa0393430:intron | 50.0% |
| !! | AGTGTTGGTGGCACAATCAG+TGG | - | chr3_2:7513159-7513178 | None:intergenic | 50.0% |
| ! | AGCTCTGGCTAGAGATCGAT+TGG | + | chr3_2:7513347-7513366 | Msa0393430:CDS | 50.0% |
| TGGCTAGAGATCGATTGGAG+CGG | + | chr3_2:7513352-7513371 | Msa0393430:CDS | 50.0% | |
| ACGAAGATATGTCCAGGGTG+TGG | - | chr3_2:7513397-7513416 | None:intergenic | 50.0% | |
| !! | TTGCAGGCCATTTTGGTGCA+TGG | + | chr3_2:7513841-7513860 | Msa0393430:intron | 50.0% |
| TATATGGCGGCTTCATGGCA+TGG | + | chr3_2:7514377-7514396 | Msa0393430:CDS | 50.0% | |
| AGCTCTTCAGTGGTTGCATC+AGG | - | chr3_2:7514629-7514648 | None:intergenic | 50.0% | |
| GCAACCACTGAAGAGCTAAG+AGG | + | chr3_2:7514632-7514651 | Msa0393430:CDS | 50.0% | |
| CCAAGATCGACCAGAAAGAC+AGG | - | chr3_2:7514704-7514723 | None:intergenic | 50.0% | |
| ! | CCTGTCTTTCTGGTCGATCT+TGG | + | chr3_2:7514701-7514720 | Msa0393430:intron | 50.0% |
| !! | TGGTCGATCTTGGTGTCAGT+TGG | + | chr3_2:7514711-7514730 | Msa0393430:intron | 50.0% |
| !! | GGTCGATCTTGGTGTCAGTT+GGG | + | chr3_2:7514712-7514731 | Msa0393430:intron | 50.0% |
| ! | GCGTGTTTGAGATCGTGGTA+TGG | + | chr3_2:7514824-7514843 | Msa0393430:intron | 50.0% |
| !!! | TGCCGAAAGCCACTTTTTGC+AGG | + | chr3_2:7514968-7514987 | Msa0393430:CDS | 50.0% |
| GGCCTGCAAAAAGTGGCTTT+CGG | - | chr3_2:7514973-7514992 | None:intergenic | 50.0% | |
| !!! | GAAAGCCACTTTTTGCAGGC+CGG | + | chr3_2:7514972-7514991 | Msa0393430:CDS | 50.0% |
| GATCGAATCCGGCACTCATT+TGG | - | chr3_2:7515057-7515076 | None:intergenic | 50.0% | |
| CCTTCGGCATTGTTGAGTGT+CGG | - | chr3_2:7515127-7515146 | None:intergenic | 50.0% | |
| !! | ACAATGCCGAAGGTGTTCCT+TGG | + | chr3_2:7515134-7515153 | Msa0393430:CDS | 50.0% |
| !! | TGGCCAAATCAGGGTGTTGA+TGG | + | chr3_2:7515547-7515566 | Msa0393430:CDS | 50.0% |
| GCTCCATCAACACCCTGATT+TGG | - | chr3_2:7515553-7515572 | None:intergenic | 50.0% | |
| !! | AATCAGGGTGTTGATGGAGC+TGG | + | chr3_2:7515553-7515572 | Msa0393430:CDS | 50.0% |
| TCTTACACCAGTGGAAGGAG+CGG | - | chr3_2:7515746-7515765 | None:intergenic | 50.0% | |
| GTAAGACTGCCAGGAGGAAA+TGG | + | chr3_2:7515760-7515779 | Msa0393430:CDS | 50.0% | |
| ATCATTTGCAGGCCGTGAAG+CGG | - | chr3_2:7515803-7515822 | None:intergenic | 50.0% | |
| TGCTATGGCTGAGACTGTTC+GGG | + | chr3_2:7515840-7515859 | Msa0393430:CDS | 50.0% | |
| ATGCTGTACAGGACTTGCAG+CGG | + | chr3_2:7516797-7516816 | Msa0393430:intron | 50.0% | |
| AGAAAGGAACGTGCCCAACT+TGG | - | chr3_2:7517088-7517107 | None:intergenic | 50.0% | |
| CCTCACACCAACTGTGACAA+AGG | - | chr3_2:7517214-7517233 | None:intergenic | 50.0% | |
| ! | CCTTTGTCACAGTTGGTGTG+AGG | + | chr3_2:7517211-7517230 | Msa0393430:three_prime_UTR | 50.0% |
| !! | AGGGTGAGGTAAGGAGCGTT+GGG | - | chr3_2:7510438-7510457 | None:intergenic | 55.0% |
| CATCACTCAGCTACCCTCTC+AGG | - | chr3_2:7511433-7511452 | None:intergenic | 55.0% | |
| CTGAGAGGGTAGCTGAGTGA+TGG | + | chr3_2:7511431-7511450 | Msa0393430:five_prime_UTR | 55.0% | |
| AGAGGGTAGCTGAGTGATGG+TGG | + | chr3_2:7511434-7511453 | Msa0393430:five_prime_UTR | 55.0% | |
| ! | ACTCTGCCCTCTGGTTCCAT+TGG | + | chr3_2:7511478-7511497 | Msa0393430:five_prime_UTR | 55.0% |
| TATGTCCAGGGTGTGGCAGA+TGG | - | chr3_2:7513390-7513409 | None:intergenic | 55.0% | |
| CTTGCACGCCAAATGAGTGC+CGG | + | chr3_2:7515046-7515065 | Msa0393430:CDS | 55.0% | |
| CCGACACTCAACAATGCCGA+AGG | + | chr3_2:7515124-7515143 | Msa0393430:CDS | 55.0% | |
| !! | ATGCCGAAGGTGTTCCTTGG+AGG | + | chr3_2:7515137-7515156 | Msa0393430:CDS | 55.0% |
| ! | CTTATCTAGGAGCGCAGGAC+TGG | + | chr3_2:7515504-7515523 | Msa0393430:intron | 55.0% |
| TTCCGCTAGTGGTCCAAGTC+AGG | + | chr3_2:7515717-7515736 | Msa0393430:CDS | 55.0% | |
| GGCAGTCTTACACCAGTGGA+AGG | - | chr3_2:7515751-7515770 | None:intergenic | 55.0% | |
| TCCACTGGTGTAAGACTGCC+AGG | + | chr3_2:7515751-7515770 | Msa0393430:CDS | 55.0% | |
| TCCTGGCAGTCTTACACCAG+TGG | - | chr3_2:7515755-7515774 | None:intergenic | 55.0% | |
| ACTGGTGTAAGACTGCCAGG+AGG | + | chr3_2:7515754-7515773 | Msa0393430:CDS | 55.0% | |
| AGACTGCCAGGAGGAAATGG+TGG | + | chr3_2:7515763-7515782 | Msa0393430:CDS | 55.0% | |
| TATGGCTGAGACTGTTCGGG+AGG | + | chr3_2:7515843-7515862 | Msa0393430:CDS | 55.0% | |
| ! | TCACAGTTGGTGTGAGGGGT+GGG | + | chr3_2:7517217-7517236 | Msa0393430:three_prime_UTR | 55.0% |
| !! | GGGTGAGGTAAGGAGCGTTG+GGG | - | chr3_2:7510437-7510456 | None:intergenic | 60.0% |
| ! | GAGGGTGAGGTAAGGAGCGT+TGG | - | chr3_2:7510439-7510458 | None:intergenic | 60.0% |
| CATCTCCATCTGCCACACCC+TGG | + | chr3_2:7513382-7513401 | Msa0393430:CDS | 60.0% | |
| TCAGGCCGGCCTGCAAAAAG+TGG | - | chr3_2:7514980-7514999 | None:intergenic | 60.0% | |
| CCACTAGCGGAAGCCTGAGA+AGG | - | chr3_2:7515709-7515728 | None:intergenic | 60.0% | |
| CCTTCTCAGGCTTCCGCTAG+TGG | + | chr3_2:7515706-7515725 | Msa0393430:CDS | 60.0% | |
| !! | CGCCTGACTTGGACCACTAG+CGG | - | chr3_2:7515722-7515741 | None:intergenic | 60.0% |
| ! | GTCACAGTTGGTGTGAGGGG+TGG | + | chr3_2:7517216-7517235 | Msa0393430:three_prime_UTR | 60.0% |
| ! | AGGAGCGCAGGACTGGACTC+AGG | + | chr3_2:7515511-7515530 | Msa0393430:intron | 65.0% |
| GCGCAGGACTGGACTCAGGT+TGG | + | chr3_2:7515515-7515534 | Msa0393430:CDS | 65.0% | |
| GAAGGAGCGGTCGCCTGACT+TGG | - | chr3_2:7515733-7515752 | None:intergenic | 65.0% | |
| GAGGGGTGGGAGAGAGAGTG+AGG | + | chr3_2:7517230-7517249 | Msa0393430:three_prime_UTR | 65.0% | |
| CAGGCGACCGCTCCTTCCAC+TGG | + | chr3_2:7515736-7515755 | Msa0393430:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 7510305 | 7517362 | 7510305 | ID=Msa0393430;Name=Msa0393430 |
| chr3_2 | mRNA | 7510305 | 7517362 | 7510305 | ID=Msa0393430-mRNA-1;Parent=Msa0393430;Name=Msa0393430-mRNA-1;_AED=0.10;_eAED=0.10;_QI=369|1|1|1|0.91|0.84|13|498|589 |
| chr3_2 | exon | 7510305 | 7510475 | 7510305 | ID=Msa0393430-mRNA-1:exon:1878;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7511408 | 7511845 | 7511408 | ID=Msa0393430-mRNA-1:exon:1879;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7512604 | 7512681 | 7512604 | ID=Msa0393430-mRNA-1:exon:1880;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7513144 | 7513230 | 7513144 | ID=Msa0393430-mRNA-1:exon:1881;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7513339 | 7513460 | 7513339 | ID=Msa0393430-mRNA-1:exon:1882;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7513659 | 7513755 | 7513659 | ID=Msa0393430-mRNA-1:exon:1883;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7513847 | 7513952 | 7513847 | ID=Msa0393430-mRNA-1:exon:1884;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7514283 | 7514440 | 7514283 | ID=Msa0393430-mRNA-1:exon:1885;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7514545 | 7514682 | 7514545 | ID=Msa0393430-mRNA-1:exon:1886;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7514773 | 7514840 | 7514773 | ID=Msa0393430-mRNA-1:exon:1887;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7514928 | 7515158 | 7514928 | ID=Msa0393430-mRNA-1:exon:1888;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7515513 | 7515900 | 7515513 | ID=Msa0393430-mRNA-1:exon:1889;Parent=Msa0393430-mRNA-1 |
| chr3_2 | exon | 7516808 | 7517362 | 7516808 | ID=Msa0393430-mRNA-1:exon:1890;Parent=Msa0393430-mRNA-1 |
| chr3_2 | five_prime_UTR | 7510305 | 7510475 | 7510305 | ID=Msa0393430-mRNA-1:five_prime_utr;Parent=Msa0393430-mRNA-1 |
| chr3_2 | five_prime_UTR | 7511408 | 7511605 | 7511408 | ID=Msa0393430-mRNA-1:five_prime_utr;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7511606 | 7511845 | 7511606 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7512604 | 7512681 | 7512604 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7513144 | 7513230 | 7513144 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7513339 | 7513460 | 7513339 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7513659 | 7513755 | 7513659 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7513847 | 7513952 | 7513847 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7514283 | 7514440 | 7514283 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7514545 | 7514682 | 7514545 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7514773 | 7514840 | 7514773 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7514928 | 7515158 | 7514928 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7515513 | 7515900 | 7515513 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | CDS | 7516808 | 7516864 | 7516808 | ID=Msa0393430-mRNA-1:cds;Parent=Msa0393430-mRNA-1 |
| chr3_2 | three_prime_UTR | 7516865 | 7517362 | 7516865 | ID=Msa0393430-mRNA-1:three_prime_utr;Parent=Msa0393430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
