Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0679020 | XP_003605955.1 | 94.820 | 946 | 15 | 3 | 1 | 923 | 1 | 935 | 0.0 | 1839 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0679020 | sp|P79051|RHP16_SCHPO | 41.655 | 713 | 308 | 14 | 218 | 921 | 246 | 859 | 1.65e-168 | 516 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0679020 | G7JEP7 | 94.820 | 946 | 15 | 3 | 1 | 923 | 1 | 935 | 0.0 | 1839 |
Gene ID | Type | Classification |
---|---|---|
Msa0679020 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006110 | Msa0679020 | 0.809150 | 2.181461e-50 | -8.615850e-47 |
Msa0023330 | Msa0679020 | 0.806068 | 9.843208e-50 | -8.615850e-47 |
Msa0044090 | Msa0679020 | 0.828171 | 1.042966e-54 | -8.615850e-47 |
Msa0051630 | Msa0679020 | 0.803608 | 3.213990e-49 | -8.615850e-47 |
Msa0054820 | Msa0679020 | 0.815790 | 7.718338e-52 | -8.615850e-47 |
Msa0089980 | Msa0679020 | 0.800946 | 1.135453e-48 | -8.615850e-47 |
Msa0090010 | Msa0679020 | 0.801020 | 1.096439e-48 | -8.615850e-47 |
Msa0101250 | Msa0679020 | 0.800593 | 1.340123e-48 | -8.615850e-47 |
Msa0679020 | Msa0697590 | 0.807489 | 4.931172e-50 | -8.615850e-47 |
Msa0679020 | Msa0797770 | 0.830120 | 3.511537e-55 | -8.615850e-47 |
Msa0679020 | Msa0835230 | 0.839028 | 2.023554e-57 | -8.615850e-47 |
Msa0679020 | Msa0965290 | 0.800855 | 1.184925e-48 | -8.615850e-47 |
Msa0679020 | Msa1043130 | -0.812069 | 5.102426e-51 | -8.615850e-47 |
Msa0679020 | Msa1111380 | 0.806516 | 7.918918e-50 | -8.615850e-47 |
Msa0679020 | Msa1162780 | 0.802296 | 6.001543e-49 | -8.615850e-47 |
Msa0679020 | Msa1163090 | 0.804525 | 2.071742e-49 | -8.615850e-47 |
Msa0679020 | Msa1236440 | 0.832548 | 8.875321e-56 | -8.615850e-47 |
Msa0679020 | Msa1277670 | 0.825958 | 3.529452e-54 | -8.615850e-47 |
Msa0679020 | Msa1325410 | -0.819352 | 1.215248e-52 | -8.615850e-47 |
Msa0679020 | Msa1352280 | -0.832953 | 7.043750e-56 | -8.615850e-47 |
Msa0679020 | Msa1425260 | 0.805300 | 1.427025e-49 | -8.615850e-47 |
Msa0679020 | Msa1442920 | 0.817702 | 2.875757e-52 | -8.615850e-47 |
Msa0679020 | Msa1452710 | 0.805625 | 1.219842e-49 | -8.615850e-47 |
Msa0679020 | Msa1458680 | 0.845811 | 3.217754e-59 | -8.615850e-47 |
Msa0183760 | Msa0679020 | 0.821415 | 4.087921e-53 | -8.615850e-47 |
Msa0189710 | Msa0679020 | 0.832077 | 1.160914e-55 | -8.615850e-47 |
Msa0224390 | Msa0679020 | 0.813282 | 2.769452e-51 | -8.615850e-47 |
Msa0224420 | Msa0679020 | 0.811234 | 7.751200e-51 | -8.615850e-47 |
Msa0225110 | Msa0679020 | 0.818980 | 1.476517e-52 | -8.615850e-47 |
Msa0230610 | Msa0679020 | 0.804592 | 2.006375e-49 | -8.615850e-47 |
Msa0232020 | Msa0679020 | 0.837702 | 4.446911e-57 | -8.615850e-47 |
Msa0232090 | Msa0679020 | 0.833212 | 6.070770e-56 | -8.615850e-47 |
Msa0403640 | Msa0679020 | 0.801054 | 1.079221e-48 | -8.615850e-47 |
Msa0428580 | Msa0679020 | 0.805643 | 1.208755e-49 | -8.615850e-47 |
Msa0464120 | Msa0679020 | 0.807309 | 5.384481e-50 | -8.615850e-47 |
Msa0266200 | Msa0679020 | 0.816461 | 5.464418e-52 | -8.615850e-47 |
Msa0267370 | Msa0679020 | 0.802375 | 5.779934e-49 | -8.615850e-47 |
Msa0287780 | Msa0679020 | 0.816922 | 4.307243e-52 | -8.615850e-47 |
Msa0287870 | Msa0679020 | 0.840847 | 6.793919e-58 | -8.615850e-47 |
Msa0305840 | Msa0679020 | 0.813078 | 3.070245e-51 | -8.615850e-47 |
Msa0310090 | Msa0679020 | 0.832065 | 1.169265e-55 | -8.615850e-47 |
Msa0521020 | Msa0679020 | 0.800661 | 1.298000e-48 | -8.615850e-47 |
Msa0531180 | Msa0679020 | 0.805198 | 1.499005e-49 | -8.615850e-47 |
Msa0568680 | Msa0679020 | 0.845338 | 4.321071e-59 | -8.615850e-47 |
Msa0571130 | Msa0679020 | 0.810804 | 9.609217e-51 | -8.615850e-47 |
Msa0574730 | Msa0679020 | 0.822662 | 2.101631e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0679020 | MtrunA17_Chr4g0024921 | 94.820 | 946 | 15 | 3 | 1 | 923 | 1 | 935 | 0.0 | 1839 |
Msa0679020 | MtrunA17_Chr1g0212331 | 30.486 | 843 | 405 | 24 | 198 | 922 | 260 | 1039 | 5.34e-97 | 328 |
Msa0679020 | MtrunA17_Chr2g0281601 | 30.389 | 849 | 408 | 25 | 190 | 922 | 521 | 1302 | 3.65e-93 | 321 |
Msa0679020 | MtrunA17_Chr2g0320751 | 30.876 | 719 | 357 | 19 | 245 | 921 | 395 | 1015 | 4.95e-93 | 317 |
Msa0679020 | MtrunA17_Chr1g0168031 | 33.152 | 552 | 250 | 16 | 434 | 921 | 656 | 1152 | 1.31e-81 | 286 |
Msa0679020 | MtrunA17_Chr1g0168031 | 34.921 | 126 | 75 | 3 | 241 | 359 | 527 | 652 | 1.38e-13 | 75.5 |
Msa0679020 | MtrunA17_Chr7g0255821 | 29.622 | 503 | 280 | 13 | 443 | 921 | 368 | 820 | 5.18e-60 | 220 |
Msa0679020 | MtrunA17_Chr7g0255821 | 32.231 | 121 | 78 | 1 | 247 | 367 | 249 | 365 | 1.21e-15 | 81.6 |
Msa0679020 | MtrunA17_Chr5g0403921 | 41.176 | 119 | 69 | 1 | 772 | 889 | 524 | 642 | 2.14e-23 | 106 |
Msa0679020 | MtrunA17_Chr1g0175191 | 36.667 | 150 | 90 | 2 | 772 | 917 | 1080 | 1228 | 1.61e-22 | 104 |
Msa0679020 | MtrunA17_Chr1g0163011 | 35.417 | 144 | 91 | 1 | 751 | 894 | 569 | 710 | 5.93e-21 | 98.6 |
Msa0679020 | MtrunA17_Chr2g0286291 | 40.769 | 130 | 74 | 2 | 766 | 894 | 506 | 633 | 2.63e-20 | 97.1 |
Msa0679020 | MtrunA17_Chr4g0066741 | 39.394 | 132 | 77 | 2 | 764 | 894 | 501 | 630 | 6.21e-20 | 95.9 |
Msa0679020 | MtrunA17_Chr5g0428401 | 26.623 | 308 | 170 | 11 | 667 | 921 | 1349 | 1653 | 1.47e-19 | 95.1 |
Msa0679020 | MtrunA17_Chr4g0017211 | 31.013 | 158 | 106 | 1 | 769 | 923 | 1827 | 1984 | 1.48e-19 | 95.1 |
Msa0679020 | MtrunA17_Chr4g0017211 | 32.222 | 180 | 100 | 7 | 177 | 354 | 1406 | 1565 | 3.64e-12 | 70.9 |
Msa0679020 | MtrunA17_Chr7g0257101 | 32.867 | 143 | 91 | 1 | 767 | 904 | 1205 | 1347 | 2.44e-19 | 94.4 |
Msa0679020 | MtrunA17_Chr5g0394201 | 38.462 | 130 | 77 | 2 | 767 | 894 | 685 | 813 | 6.08e-19 | 92.8 |
Msa0679020 | MtrunA17_Chr4g0052341 | 32.121 | 165 | 105 | 4 | 748 | 907 | 1056 | 1218 | 5.35e-18 | 90.1 |
Msa0679020 | MtrunA17_Chr1g0205891 | 36.154 | 130 | 80 | 2 | 767 | 894 | 699 | 827 | 1.20e-17 | 88.6 |
Msa0679020 | MtrunA17_Chr8g0384531 | 32.667 | 150 | 100 | 1 | 772 | 921 | 758 | 906 | 1.20e-17 | 88.6 |
Msa0679020 | MtrunA17_Chr5g0442141 | 35.333 | 150 | 91 | 3 | 772 | 918 | 951 | 1097 | 4.40e-17 | 87.0 |
Msa0679020 | MtrunA17_Chr8g0348721 | 34.416 | 154 | 96 | 3 | 759 | 911 | 1319 | 1468 | 6.75e-17 | 86.3 |
Msa0679020 | MtrunA17_Chr7g0232121 | 30.366 | 191 | 114 | 3 | 749 | 922 | 362 | 550 | 9.16e-17 | 85.5 |
Msa0679020 | MtrunA17_Chr3g0095091 | 35.333 | 150 | 91 | 3 | 772 | 918 | 905 | 1051 | 1.33e-16 | 85.5 |
Msa0679020 | MtrunA17_Chr4g0040301 | 32.353 | 136 | 92 | 0 | 772 | 907 | 398 | 533 | 1.97e-16 | 84.3 |
Msa0679020 | MtrunA17_Chr7g0231521 | 29.843 | 191 | 115 | 3 | 749 | 922 | 283 | 471 | 2.65e-16 | 84.0 |
Msa0679020 | MtrunA17_Chr4g0066651 | 38.400 | 125 | 74 | 2 | 772 | 894 | 1326 | 1449 | 7.82e-16 | 83.2 |
Msa0679020 | MtrunA17_Chr5g0393461 | 33.108 | 148 | 97 | 2 | 749 | 895 | 535 | 681 | 2.69e-15 | 80.9 |
Msa0679020 | MtrunA17_Chr7g0248031 | 32.468 | 154 | 99 | 3 | 759 | 911 | 1327 | 1476 | 6.10e-15 | 80.1 |
Msa0679020 | MtrunA17_Chr3g0137091 | 31.544 | 149 | 99 | 3 | 762 | 908 | 618 | 765 | 7.20e-15 | 79.7 |
Msa0679020 | MtrunA17_Chr4g0069451 | 28.571 | 154 | 106 | 2 | 734 | 887 | 454 | 603 | 7.89e-15 | 79.0 |
Msa0679020 | MtrunA17_Chr1g0183681 | 30.833 | 120 | 83 | 0 | 772 | 891 | 753 | 872 | 7.22e-14 | 76.3 |
Msa0679020 | MtrunA17_Chr3g0083491 | 30.252 | 119 | 81 | 2 | 772 | 890 | 1171 | 1287 | 1.46e-12 | 72.0 |
Msa0679020 | MtrunA17_Chr7g0233001 | 32.911 | 158 | 94 | 4 | 772 | 918 | 339 | 495 | 1.54e-12 | 71.2 |
Msa0679020 | MtrunA17_Chr2g0320781 | 32.911 | 158 | 94 | 5 | 738 | 885 | 75 | 230 | 5.12e-12 | 67.0 |
Msa0679020 | MtrunA17_Chr1g0190381 | 33.099 | 142 | 81 | 2 | 768 | 895 | 202 | 343 | 7.97e-12 | 68.9 |
Msa0679020 | MtrunA17_Chr7g0225791 | 36.232 | 138 | 76 | 4 | 772 | 898 | 1104 | 1240 | 8.30e-12 | 69.7 |
Msa0679020 | MtrunA17_Chr3g0086111 | 26.744 | 172 | 123 | 1 | 752 | 920 | 529 | 700 | 9.65e-12 | 69.3 |
Msa0679020 | MtrunA17_Chr4g0047081 | 35.036 | 137 | 79 | 3 | 772 | 898 | 1054 | 1190 | 1.46e-11 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0679020 | AT1G05120.1 | 66.244 | 788 | 225 | 10 | 160 | 923 | 63 | 833 | 0.0 | 1061 |
Msa0679020 | AT1G05120.2 | 66.244 | 788 | 225 | 10 | 160 | 923 | 106 | 876 | 0.0 | 1059 |
Msa0679020 | AT1G02670.6 | 58.300 | 494 | 155 | 5 | 431 | 921 | 217 | 662 | 0.0 | 573 |
Msa0679020 | AT1G02670.6 | 53.416 | 161 | 60 | 2 | 201 | 360 | 69 | 215 | 4.14e-41 | 161 |
Msa0679020 | AT1G02670.3 | 58.300 | 494 | 155 | 5 | 431 | 921 | 244 | 689 | 0.0 | 571 |
Msa0679020 | AT1G02670.3 | 54.248 | 153 | 56 | 1 | 208 | 360 | 104 | 242 | 6.22e-41 | 161 |
Msa0679020 | AT1G02670.5 | 58.520 | 446 | 135 | 4 | 431 | 874 | 217 | 614 | 4.23e-176 | 524 |
Msa0679020 | AT1G02670.5 | 53.416 | 161 | 60 | 2 | 201 | 360 | 69 | 215 | 2.68e-41 | 161 |
Msa0679020 | AT1G02670.2 | 58.520 | 446 | 135 | 4 | 431 | 874 | 244 | 641 | 2.47e-175 | 523 |
Msa0679020 | AT1G02670.2 | 53.416 | 161 | 60 | 2 | 201 | 360 | 96 | 242 | 4.40e-41 | 161 |
Msa0679020 | AT1G02670.7 | 51.012 | 494 | 168 | 7 | 431 | 921 | 244 | 666 | 6.01e-149 | 456 |
Msa0679020 | AT1G02670.7 | 54.248 | 153 | 56 | 1 | 208 | 360 | 104 | 242 | 3.16e-41 | 162 |
Msa0679020 | AT1G02670.1 | 51.012 | 494 | 168 | 7 | 431 | 921 | 255 | 677 | 8.85e-149 | 456 |
Msa0679020 | AT1G02670.1 | 54.248 | 153 | 56 | 1 | 208 | 360 | 115 | 253 | 4.78e-41 | 161 |
Msa0679020 | AT1G61140.3 | 32.317 | 820 | 395 | 23 | 194 | 922 | 369 | 1119 | 2.28e-104 | 350 |
Msa0679020 | AT1G61140.1 | 32.317 | 820 | 395 | 23 | 194 | 922 | 527 | 1277 | 9.05e-104 | 351 |
Msa0679020 | AT1G50410.2 | 30.769 | 858 | 391 | 24 | 194 | 922 | 197 | 980 | 2.54e-101 | 339 |
Msa0679020 | AT1G50410.1 | 30.769 | 858 | 391 | 24 | 194 | 922 | 197 | 980 | 2.54e-101 | 339 |
Msa0679020 | AT1G50410.3 | 30.769 | 858 | 391 | 24 | 194 | 922 | 197 | 980 | 2.54e-101 | 339 |
Msa0679020 | AT3G20010.3 | 30.678 | 841 | 391 | 22 | 213 | 922 | 1 | 780 | 4.52e-100 | 331 |
Msa0679020 | AT1G02670.4 | 50.760 | 329 | 112 | 4 | 431 | 757 | 244 | 524 | 9.18e-99 | 320 |
Msa0679020 | AT1G02670.4 | 53.416 | 161 | 60 | 2 | 201 | 360 | 96 | 242 | 6.38e-42 | 162 |
Msa0679020 | AT3G20010.1 | 30.569 | 844 | 394 | 22 | 210 | 922 | 264 | 1046 | 1.34e-97 | 330 |
Msa0679020 | AT3G20010.5 | 30.569 | 844 | 394 | 22 | 210 | 922 | 264 | 1046 | 1.34e-97 | 330 |
Msa0679020 | AT3G20010.7 | 30.569 | 844 | 394 | 22 | 210 | 922 | 264 | 1046 | 1.34e-97 | 330 |
Msa0679020 | AT1G11100.3 | 31.081 | 814 | 395 | 26 | 208 | 922 | 380 | 1126 | 2.55e-94 | 322 |
Msa0679020 | AT3G20010.2 | 30.473 | 804 | 369 | 21 | 248 | 922 | 13 | 755 | 4.43e-94 | 314 |
Msa0679020 | AT1G11100.2 | 31.081 | 814 | 395 | 26 | 208 | 922 | 522 | 1268 | 1.10e-93 | 322 |
Msa0679020 | AT1G11100.4 | 31.081 | 814 | 395 | 26 | 208 | 922 | 523 | 1269 | 1.13e-93 | 322 |
Msa0679020 | AT5G22750.1 | 31.397 | 723 | 345 | 21 | 245 | 921 | 411 | 1028 | 8.67e-91 | 311 |
Msa0679020 | AT5G43530.1 | 33.977 | 518 | 260 | 8 | 436 | 921 | 809 | 1276 | 5.07e-84 | 295 |
Msa0679020 | AT5G43530.1 | 34.375 | 128 | 74 | 2 | 245 | 362 | 679 | 806 | 2.31e-14 | 78.6 |
Msa0679020 | AT3G16600.1 | 29.772 | 702 | 310 | 26 | 223 | 903 | 49 | 588 | 4.50e-69 | 242 |
Msa0679020 | AT1G11100.5 | 31.306 | 559 | 268 | 17 | 438 | 922 | 566 | 1082 | 4.04e-68 | 247 |
Msa0679020 | AT1G11100.5 | 37.079 | 178 | 86 | 6 | 208 | 362 | 380 | 554 | 3.28e-20 | 97.4 |
Msa0679020 | AT1G11100.1 | 30.590 | 559 | 272 | 17 | 438 | 922 | 709 | 1225 | 1.99e-65 | 240 |
Msa0679020 | AT1G11100.1 | 35.593 | 177 | 90 | 4 | 208 | 362 | 523 | 697 | 4.06e-20 | 97.1 |
Msa0679020 | AT1G50410.4 | 27.984 | 754 | 344 | 22 | 194 | 821 | 197 | 877 | 1.74e-63 | 231 |
Msa0679020 | AT5G05130.1 | 30.498 | 482 | 270 | 11 | 431 | 895 | 419 | 852 | 1.38e-58 | 217 |
Msa0679020 | AT1G61140.2 | 31.827 | 531 | 245 | 17 | 194 | 674 | 534 | 997 | 6.26e-52 | 198 |
Msa0679020 | AT3G20010.4 | 28.693 | 589 | 295 | 16 | 298 | 821 | 415 | 943 | 2.32e-51 | 196 |
Msa0679020 | AT3G20010.6 | 28.693 | 589 | 295 | 16 | 298 | 821 | 415 | 943 | 2.32e-51 | 196 |
Msa0679020 | AT3G20010.8 | 28.693 | 589 | 295 | 16 | 298 | 821 | 415 | 943 | 2.32e-51 | 196 |
Msa0679020 | AT2G02090.1 | 24.783 | 690 | 341 | 25 | 226 | 902 | 211 | 735 | 5.46e-32 | 134 |
Msa0679020 | AT5G66750.1 | 42.857 | 119 | 67 | 1 | 772 | 889 | 542 | 660 | 4.11e-24 | 109 |
Msa0679020 | AT2G40770.2 | 27.338 | 278 | 178 | 7 | 667 | 923 | 1341 | 1615 | 7.96e-24 | 109 |
Msa0679020 | AT2G40770.1 | 27.338 | 278 | 178 | 7 | 667 | 923 | 1341 | 1615 | 7.96e-24 | 109 |
Msa0679020 | AT2G40770.3 | 27.338 | 278 | 178 | 7 | 667 | 923 | 1341 | 1615 | 7.96e-24 | 109 |
Msa0679020 | AT3G12810.2 | 37.984 | 129 | 80 | 0 | 769 | 897 | 1086 | 1214 | 6.05e-23 | 106 |
Msa0679020 | AT3G12810.1 | 37.984 | 129 | 80 | 0 | 769 | 897 | 1090 | 1218 | 6.11e-23 | 106 |
Msa0679020 | AT3G57300.1 | 31.847 | 157 | 106 | 1 | 767 | 922 | 1219 | 1375 | 7.46e-20 | 96.3 |
Msa0679020 | AT3G57300.4 | 31.847 | 157 | 106 | 1 | 767 | 922 | 1219 | 1375 | 7.46e-20 | 96.3 |
Msa0679020 | AT3G57300.2 | 31.847 | 157 | 106 | 1 | 767 | 922 | 1252 | 1408 | 8.62e-20 | 96.3 |
Msa0679020 | AT5G18620.2 | 38.400 | 125 | 76 | 1 | 771 | 894 | 512 | 636 | 1.09e-19 | 95.5 |
Msa0679020 | AT3G06400.2 | 39.231 | 130 | 76 | 2 | 766 | 894 | 504 | 631 | 1.11e-19 | 95.5 |
Msa0679020 | AT3G06400.1 | 39.231 | 130 | 76 | 2 | 766 | 894 | 504 | 631 | 1.12e-19 | 95.5 |
Msa0679020 | AT3G06400.3 | 39.231 | 130 | 76 | 2 | 766 | 894 | 504 | 631 | 1.18e-19 | 95.5 |
Msa0679020 | AT5G18620.1 | 38.400 | 125 | 76 | 1 | 771 | 894 | 512 | 636 | 1.23e-19 | 95.5 |
Msa0679020 | AT2G44980.1 | 35.000 | 160 | 101 | 2 | 749 | 907 | 365 | 522 | 7.24e-19 | 92.8 |
Msa0679020 | AT3G54280.1 | 29.747 | 158 | 108 | 1 | 769 | 923 | 1829 | 1986 | 7.32e-19 | 93.2 |
Msa0679020 | AT5G63950.2 | 33.333 | 150 | 99 | 1 | 772 | 921 | 733 | 881 | 8.58e-19 | 92.8 |
Msa0679020 | AT5G63950.1 | 33.333 | 150 | 99 | 1 | 772 | 921 | 750 | 898 | 8.89e-19 | 92.8 |
Msa0679020 | AT3G54280.2 | 29.747 | 158 | 108 | 1 | 769 | 923 | 1860 | 2017 | 8.91e-19 | 92.8 |
Msa0679020 | AT2G44980.2 | 32.941 | 170 | 101 | 2 | 749 | 907 | 374 | 541 | 9.30e-18 | 89.0 |
Msa0679020 | AT2G44980.3 | 32.941 | 170 | 101 | 2 | 749 | 907 | 373 | 540 | 9.37e-18 | 89.0 |
Msa0679020 | AT5G19310.2 | 37.600 | 125 | 75 | 2 | 772 | 894 | 449 | 572 | 2.00e-17 | 87.8 |
Msa0679020 | AT5G19310.1 | 37.600 | 125 | 75 | 2 | 772 | 894 | 713 | 836 | 2.27e-17 | 88.2 |
Msa0679020 | AT1G03750.1 | 34.307 | 137 | 90 | 0 | 772 | 908 | 546 | 682 | 2.35e-17 | 87.8 |
Msa0679020 | AT5G44800.1 | 36.719 | 128 | 79 | 2 | 772 | 897 | 1022 | 1149 | 2.85e-17 | 88.2 |
Msa0679020 | AT3G06010.1 | 35.385 | 130 | 81 | 2 | 767 | 894 | 726 | 854 | 4.80e-17 | 87.0 |
Msa0679020 | AT2G13370.1 | 34.899 | 149 | 91 | 3 | 767 | 912 | 952 | 1097 | 8.30e-17 | 86.7 |
Msa0679020 | AT2G13370.2 | 34.899 | 149 | 91 | 3 | 767 | 912 | 952 | 1097 | 8.30e-17 | 86.7 |
Msa0679020 | AT2G13370.3 | 34.899 | 149 | 91 | 3 | 767 | 912 | 952 | 1097 | 8.30e-17 | 86.7 |
Msa0679020 | AT3G54460.2 | 32.258 | 124 | 83 | 1 | 772 | 895 | 898 | 1020 | 1.58e-16 | 85.5 |
Msa0679020 | AT3G54460.1 | 32.258 | 124 | 83 | 1 | 772 | 895 | 1195 | 1317 | 1.80e-16 | 85.1 |
Msa0679020 | AT3G19210.1 | 32.716 | 162 | 104 | 2 | 765 | 921 | 546 | 707 | 4.22e-16 | 84.0 |
Msa0679020 | AT3G19210.2 | 32.716 | 162 | 104 | 2 | 765 | 921 | 544 | 705 | 4.55e-16 | 83.6 |
Msa0679020 | AT3G19210.3 | 32.716 | 162 | 104 | 2 | 765 | 921 | 546 | 707 | 4.78e-16 | 83.6 |
Msa0679020 | AT2G28290.3 | 37.903 | 124 | 76 | 1 | 772 | 894 | 1091 | 1214 | 7.97e-16 | 83.6 |
Msa0679020 | AT2G28290.4 | 37.903 | 124 | 76 | 1 | 772 | 894 | 1091 | 1214 | 7.97e-16 | 83.6 |
Msa0679020 | AT2G28290.6 | 37.903 | 124 | 76 | 1 | 772 | 894 | 1092 | 1215 | 8.03e-16 | 83.6 |
Msa0679020 | AT2G28290.5 | 37.903 | 124 | 76 | 1 | 772 | 894 | 1092 | 1215 | 8.25e-16 | 83.6 |
Msa0679020 | AT2G28290.1 | 37.903 | 124 | 76 | 1 | 772 | 894 | 1091 | 1214 | 8.46e-16 | 83.2 |
Msa0679020 | AT2G28290.2 | 37.903 | 124 | 76 | 1 | 772 | 894 | 1091 | 1214 | 8.67e-16 | 83.2 |
Msa0679020 | AT2G46020.2 | 33.766 | 154 | 97 | 3 | 759 | 911 | 1314 | 1463 | 1.01e-15 | 83.2 |
Msa0679020 | AT2G46020.3 | 33.766 | 154 | 97 | 3 | 759 | 911 | 1314 | 1463 | 1.01e-15 | 83.2 |
Msa0679020 | AT2G46020.4 | 33.766 | 154 | 97 | 3 | 759 | 911 | 1314 | 1463 | 1.01e-15 | 83.2 |
Msa0679020 | AT2G46020.5 | 33.766 | 154 | 97 | 3 | 759 | 911 | 1313 | 1462 | 1.04e-15 | 82.8 |
Msa0679020 | AT2G46020.1 | 33.766 | 154 | 97 | 3 | 759 | 911 | 1313 | 1462 | 1.04e-15 | 82.8 |
Msa0679020 | AT2G46020.6 | 33.766 | 154 | 97 | 3 | 759 | 911 | 1313 | 1462 | 1.04e-15 | 82.8 |
Msa0679020 | AT2G18760.4 | 31.034 | 145 | 98 | 1 | 747 | 891 | 722 | 864 | 1.51e-15 | 82.0 |
Msa0679020 | AT2G18760.1 | 31.034 | 145 | 98 | 1 | 747 | 891 | 722 | 864 | 1.51e-15 | 82.0 |
Msa0679020 | AT2G18760.2 | 31.034 | 145 | 98 | 1 | 747 | 891 | 722 | 864 | 1.51e-15 | 82.0 |
Msa0679020 | AT2G18760.7 | 31.034 | 145 | 98 | 1 | 747 | 891 | 722 | 864 | 1.51e-15 | 82.0 |
Msa0679020 | AT2G18760.5 | 31.034 | 145 | 98 | 1 | 747 | 891 | 722 | 864 | 1.51e-15 | 82.0 |
Msa0679020 | AT2G18760.6 | 31.034 | 145 | 98 | 1 | 747 | 891 | 722 | 864 | 1.51e-15 | 82.0 |
Msa0679020 | AT2G18760.3 | 31.034 | 145 | 98 | 1 | 747 | 891 | 781 | 923 | 1.67e-15 | 82.0 |
Msa0679020 | AT1G48310.1 | 26.984 | 189 | 134 | 2 | 721 | 909 | 439 | 623 | 1.28e-14 | 78.6 |
Msa0679020 | AT2G25170.2 | 32.414 | 145 | 95 | 3 | 762 | 904 | 619 | 762 | 1.33e-14 | 79.3 |
Msa0679020 | AT2G25170.1 | 32.414 | 145 | 95 | 3 | 762 | 904 | 602 | 745 | 1.34e-14 | 79.3 |
Msa0679020 | AT2G25170.4 | 32.414 | 145 | 95 | 3 | 762 | 904 | 602 | 745 | 1.34e-14 | 79.3 |
Msa0679020 | AT2G25170.3 | 32.414 | 145 | 95 | 3 | 762 | 904 | 628 | 771 | 1.46e-14 | 79.0 |
Msa0679020 | AT1G48310.2 | 26.984 | 189 | 134 | 2 | 721 | 909 | 444 | 628 | 1.47e-14 | 78.6 |
Msa0679020 | AT1G48310.3 | 28.571 | 161 | 111 | 2 | 734 | 894 | 452 | 608 | 1.77e-14 | 78.2 |
Msa0679020 | AT4G31900.3 | 28.472 | 144 | 101 | 2 | 762 | 903 | 531 | 674 | 7.67e-14 | 76.6 |
Msa0679020 | AT4G31900.1 | 28.472 | 144 | 101 | 2 | 762 | 903 | 531 | 674 | 8.96e-14 | 76.3 |
Msa0679020 | AT4G31900.2 | 28.472 | 144 | 101 | 2 | 762 | 903 | 490 | 633 | 1.06e-13 | 76.3 |
Msa0679020 | AT1G08600.1 | 34.507 | 142 | 79 | 2 | 768 | 895 | 1108 | 1249 | 1.80e-12 | 72.4 |
Msa0679020 | AT1G08600.4 | 34.507 | 142 | 79 | 2 | 768 | 895 | 1129 | 1270 | 2.05e-12 | 72.0 |
Msa0679020 | AT1G08600.3 | 34.507 | 142 | 79 | 2 | 768 | 895 | 1129 | 1270 | 2.05e-12 | 72.0 |
Msa0679020 | AT1G08600.2 | 34.507 | 142 | 79 | 2 | 768 | 895 | 1129 | 1270 | 2.05e-12 | 72.0 |
Msa0679020 | AT1G05490.1 | 36.975 | 119 | 69 | 2 | 772 | 884 | 1217 | 1335 | 3.91e-11 | 67.8 |
Find 229 sgRNAs with CRISPR-Local
Find 552 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATTTACTACCTCTCTTTC+TGG | 0.110785 | 4_4:-36460335 | None:intergenic |
AGAGAGAGAAAGTGATAATT+AGG | 0.136697 | 4_4:-36458820 | None:intergenic |
GAGAGAAGAAATTAGATTTA+TGG | 0.174362 | 4_4:+36465218 | Msa0679020:intron |
TGATAAAACAACAACAATTA+AGG | 0.177264 | 4_4:+36464721 | Msa0679020:CDS |
ATCATCAGTAAATTTCTTAA+TGG | 0.256211 | 4_4:-36465456 | None:intergenic |
TAGCCAGTTCACATCATTCT+TGG | 0.257616 | 4_4:+36465275 | Msa0679020:CDS |
TCAGCACTCTTCCATCTCTT+TGG | 0.267531 | 4_4:-36461000 | None:intergenic |
TGTTAACTAAAATGAAATAA+AGG | 0.286440 | 4_4:+36467306 | Msa0679020:three_prime_UTR |
ACAGTCCTTGCACAGGTTAT+AGG | 0.302494 | 4_4:-36462029 | None:intergenic |
GAGAGAGAAAGTGATAATTA+GGG | 0.303768 | 4_4:-36458819 | None:intergenic |
GAAATAATCTTCCACAATAT+TGG | 0.305287 | 4_4:-36461113 | None:intergenic |
GTTACTTAAGCTGGCCTGAT+AGG | 0.306168 | 4_4:+36467080 | Msa0679020:exon |
CCAACTGCAGCAGCACTAAA+AGG | 0.314994 | 4_4:+36464369 | Msa0679020:CDS |
TGTTGGAGAGCTATATTCTT+TGG | 0.317103 | 4_4:+36461820 | Msa0679020:CDS |
GAAAGGAAGCACGAAGGTTC+TGG | 0.322638 | 4_4:+36460966 | Msa0679020:CDS |
TTCGTCGTTCGCTTCGTCAA+TGG | 0.326729 | 4_4:+36458848 | Msa0679020:exon |
CGCATTTATAGGCGTCGTTA+TGG | 0.331440 | 4_4:-36458708 | None:intergenic |
CTTGCACAGGTTATAGGAAT+AGG | 0.339208 | 4_4:-36462023 | None:intergenic |
CCAATTCAATCATCCGGATA+TGG | 0.350323 | 4_4:+36462729 | Msa0679020:CDS |
AGCTGGCCTGATAGGGTAAC+TGG | 0.351704 | 4_4:+36467088 | Msa0679020:exon |
TGCCCTTGTCCTTGCTAAAC+GGG | 0.353806 | 4_4:+36460798 | Msa0679020:CDS |
TGCCATAACAACACTGGTTT+AGG | 0.358363 | 4_4:-36460544 | None:intergenic |
TTCATTGAGGAGGGATAGCC+TGG | 0.360612 | 4_4:+36462952 | Msa0679020:CDS |
TTTCTCTTTGTTACTTAAGC+TGG | 0.361121 | 4_4:+36467071 | Msa0679020:exon |
TTTGGTTATGTTTGGATTGA+CGG | 0.365862 | 4_4:+36467373 | Msa0679020:three_prime_UTR |
TTAGCTGTAAGTAGATATAT+TGG | 0.366884 | 4_4:+36467222 | Msa0679020:three_prime_UTR |
CCTTAGAGTCTTTCTACAAA+TGG | 0.370131 | 4_4:+36461768 | Msa0679020:CDS |
CAGGCCCACAATAGTACTTC+TGG | 0.374592 | 4_4:-36461158 | None:intergenic |
GGATGAATTAGCGGCTGATA+AGG | 0.375599 | 4_4:+36459737 | Msa0679020:intron |
GCAGTTTGAACATACTTTAG+AGG | 0.379174 | 4_4:-36462533 | None:intergenic |
GCGGGAAGAGACGCATTTAT+AGG | 0.382583 | 4_4:-36458719 | None:intergenic |
CAGGTCTGTAGATTCTATCT+TGG | 0.382698 | 4_4:-36460356 | None:intergenic |
GATAAAACAACAACAATTAA+GGG | 0.383339 | 4_4:+36464722 | Msa0679020:CDS |
GATGAATTAGCGGCTGATAA+GGG | 0.383814 | 4_4:+36459738 | Msa0679020:intron |
GTCTTAAGGCGAACTAAAAT+AGG | 0.384212 | 4_4:+36462807 | Msa0679020:CDS |
TTGCCCTTGTCCTTGCTAAA+CGG | 0.387044 | 4_4:+36460797 | Msa0679020:CDS |
ATCCTAAACCAGTGTTGTTA+TGG | 0.390596 | 4_4:+36460542 | Msa0679020:CDS |
GCTTCAGATGAAATCGATTC+TGG | 0.392028 | 4_4:+36458894 | Msa0679020:CDS |
GGGATGGGATGAGACGAAAA+TGG | 0.396442 | 4_4:-36458772 | None:intergenic |
GAACCCTGCTGTGGAGCGTC+AGG | 0.399177 | 4_4:+36466590 | Msa0679020:CDS |
ACAACGAAGTGATGTATGTT+AGG | 0.399569 | 4_4:+36467405 | Msa0679020:three_prime_UTR |
GAATCACTGATGATTATAGT+AGG | 0.405472 | 4_4:-36460241 | None:intergenic |
CGTTAACTGCTCATAGATAC+TGG | 0.406151 | 4_4:-36467191 | None:intergenic |
CCGTGGTTGCTGTCACTCAA+TGG | 0.407106 | 4_4:+36460917 | Msa0679020:CDS |
CTTAGAGTCTTTCTACAAAT+GGG | 0.409079 | 4_4:+36461769 | Msa0679020:CDS |
AATTAGATTTATGGTTGAAA+GGG | 0.410682 | 4_4:+36465227 | Msa0679020:CDS |
GGAGAATACACTACAAGATA+TGG | 0.417545 | 4_4:-36464348 | None:intergenic |
CCATATCCGGATGATTGAAT+TGG | 0.418058 | 4_4:-36462729 | None:intergenic |
TTTCCCATCATCACCATATC+CGG | 0.419503 | 4_4:-36462742 | None:intergenic |
TGGAATCCTTGCTGATGAAA+TGG | 0.420074 | 4_4:+36460750 | Msa0679020:CDS |
TGAGCCTGACGCTCCACAGC+AGG | 0.425918 | 4_4:-36466594 | None:intergenic |
CCATTTGTAGAAAGACTCTA+AGG | 0.426209 | 4_4:-36461768 | None:intergenic |
AAACAAGAACTCACGATCCT+AGG | 0.437052 | 4_4:-36462855 | None:intergenic |
CAAGTAAATTTACCTTCTGC+AGG | 0.439021 | 4_4:-36465314 | None:intergenic |
AGGTGTATCTTGTGTTCAAT+TGG | 0.439723 | 4_4:+36465400 | Msa0679020:CDS |
TCAGACAAGTACTAAAATAG+AGG | 0.440405 | 4_4:+36464790 | Msa0679020:CDS |
CTGATTCATCTGACTTTAGC+GGG | 0.441027 | 4_4:+36460284 | Msa0679020:CDS |
ACGAAGGTTCTGGTTTATCA+TGG | 0.441863 | 4_4:+36460976 | Msa0679020:CDS |
AACATATTCTACTGTGGAAT+CGG | 0.445190 | 4_4:+36461053 | Msa0679020:CDS |
TGCAAGAAGCAGTACCTGAT+TGG | 0.448107 | 4_4:-36466648 | None:intergenic |
CGTGGTTGCTGTCACTCAAT+GGG | 0.456424 | 4_4:+36460918 | Msa0679020:CDS |
AAGAAGGAACTGGTATTTGA+AGG | 0.457652 | 4_4:+36466902 | Msa0679020:CDS |
GTTGGATGGAGAGTTGGAAC+AGG | 0.458440 | 4_4:+36461245 | Msa0679020:CDS |
AAGAAGGAAGAGGATTTAGA+AGG | 0.458921 | 4_4:+36461279 | Msa0679020:CDS |
TGGTGTAGAGAGAGCGCTGC+TGG | 0.459807 | 4_4:+36460414 | Msa0679020:CDS |
GTTAGCATGGGCTTTGAAGC+AGG | 0.462620 | 4_4:+36460708 | Msa0679020:CDS |
ATCAACCACGGCATCCTTGT+TGG | 0.463766 | 4_4:-36464702 | None:intergenic |
GGGTCTTGATTCAAGTCAAA+GGG | 0.468248 | 4_4:-36460220 | None:intergenic |
TCATCCGGATATGGTGATGA+TGG | 0.469925 | 4_4:+36462738 | Msa0679020:CDS |
AAGAGGTCAGAGTTCAAAGT+TGG | 0.470704 | 4_4:+36461227 | Msa0679020:CDS |
AGGCACACTTTATAAAATCT+AGG | 0.474017 | 4_4:+36461717 | Msa0679020:intron |
ATTGCAGGACACTTGATCAT+AGG | 0.475942 | 4_4:+36462053 | Msa0679020:CDS |
CCCATGCTAACCATTCCCTT+TGG | 0.477200 | 4_4:-36460696 | None:intergenic |
TTCACCAGAAGTACTATTGT+GGG | 0.478100 | 4_4:+36461154 | Msa0679020:CDS |
ATTTCCAATGGTTGCTGAAG+AGG | 0.478344 | 4_4:+36460453 | Msa0679020:CDS |
AAGACAGAATTCACCGGATA+GGG | 0.480304 | 4_4:+36466616 | Msa0679020:CDS |
TGTGCAAGGACTGTGATTGC+AGG | 0.481850 | 4_4:+36462038 | Msa0679020:CDS |
AGCACTAAAAGGTGGGAACT+TGG | 0.482029 | 4_4:+36464380 | Msa0679020:CDS |
TTCTACAAATGGGCATTAAG+TGG | 0.484146 | 4_4:+36461779 | Msa0679020:CDS |
TTTGTTGTTCTAATAGCGTC+AGG | 0.484997 | 4_4:-36461177 | None:intergenic |
CTTGAAACTTCAAGAGAAGA+AGG | 0.485345 | 4_4:+36466886 | Msa0679020:CDS |
TTCCTTGGCAGCTTAGGTAA+AGG | 0.488300 | 4_4:-36460490 | None:intergenic |
TGAAATAAAGGATATAAACT+TGG | 0.489698 | 4_4:+36467318 | Msa0679020:three_prime_UTR |
CCTTGCTGATGAAATGGGTA+TGG | 0.490612 | 4_4:+36460756 | Msa0679020:CDS |
CCTCCTCACACGACTACGTC+AGG | 0.490749 | 4_4:+36463913 | Msa0679020:CDS |
AAATTAGATTTATGGTTGAA+AGG | 0.491004 | 4_4:+36465226 | Msa0679020:CDS |
GCCACACCAATTCAATCATC+CGG | 0.492029 | 4_4:+36462723 | Msa0679020:CDS |
TTAGCGGGCCTTCATCTAAA+CGG | 0.494439 | 4_4:+36460299 | Msa0679020:CDS |
TTAGGTAAAGGTAAATCAAA+TGG | 0.496064 | 4_4:-36460478 | None:intergenic |
GTGGATCGATCAGAATTTGT+TGG | 0.497726 | 4_4:+36460591 | Msa0679020:CDS |
ATTGCTCGATTTACTTTGAA+AGG | 0.498988 | 4_4:+36460949 | Msa0679020:CDS |
GGAGAATCTGAGTGTTCAAA+TGG | 0.500927 | 4_4:-36460844 | None:intergenic |
ATCACTATACAATGAAAGTC+AGG | 0.501026 | 4_4:+36463000 | Msa0679020:CDS |
TTACTTAAGCTGGCCTGATA+GGG | 0.501745 | 4_4:+36467081 | Msa0679020:exon |
TAAGGCGAACTAAAATAGGC+AGG | 0.503491 | 4_4:+36462811 | Msa0679020:CDS |
CAGTGTTGTTATGGCATGCT+TGG | 0.503619 | 4_4:+36460551 | Msa0679020:CDS |
TTCAAAGTTGGATGGAGAGT+TGG | 0.508987 | 4_4:+36461239 | Msa0679020:CDS |
CTGATCTTGCACTTCCGCCT+AGG | 0.509821 | 4_4:+36462838 | Msa0679020:CDS |
TTGGTTTGTACTGCCCTATC+CGG | 0.512738 | 4_4:-36466629 | None:intergenic |
ACTTCAAGAGAAGAAGGAAC+TGG | 0.518885 | 4_4:+36466892 | Msa0679020:CDS |
ACTGCTCCCACAGTTCTGTT+AGG | 0.520133 | 4_4:+36462551 | Msa0679020:CDS |
TCTGATTCATCTGACTTTAG+CGG | 0.521032 | 4_4:+36460283 | Msa0679020:CDS |
AGATTTATGGTTGAAAGGGA+TGG | 0.521533 | 4_4:+36465231 | Msa0679020:CDS |
TTGCACAGGTTATAGGAATA+GGG | 0.521546 | 4_4:-36462022 | None:intergenic |
GTATCTTGTGTTCAATTGGT+TGG | 0.521810 | 4_4:+36465404 | Msa0679020:CDS |
CGATGATGAGTTATTTCCAA+TGG | 0.521862 | 4_4:+36460441 | Msa0679020:CDS |
AAGTATGACATTAACTGCTC+GGG | 0.525278 | 4_4:+36465427 | Msa0679020:CDS |
ACAAGAGTTCCTTTGATCAC+AGG | 0.527283 | 4_4:-36460886 | None:intergenic |
GAAGTATGACATTAACTGCT+CGG | 0.528022 | 4_4:+36465426 | Msa0679020:CDS |
GATCCAAGAATGATGTGAAC+TGG | 0.530325 | 4_4:-36465278 | None:intergenic |
TCCTTTGCCACTTCACAGCA+TGG | 0.533401 | 4_4:-36461320 | None:intergenic |
TACCTTTACCTAAGCTGCCA+AGG | 0.535158 | 4_4:+36460488 | Msa0679020:CDS |
GGCGGTTCTTCAGAGGCTCT+AGG | 0.536140 | 4_4:+36467023 | Msa0679020:CDS |
ACCAAAGGGAATGGTTAGCA+TGG | 0.538231 | 4_4:+36460695 | Msa0679020:CDS |
CTCTCCAACACGATTCTGAA+GGG | 0.541536 | 4_4:-36461807 | None:intergenic |
GGAATCCTTGCTGATGAAAT+GGG | 0.542503 | 4_4:+36460751 | Msa0679020:CDS |
CGAAGGTTCTGGTTTATCAT+GGG | 0.543237 | 4_4:+36460977 | Msa0679020:CDS |
CTCTATCAAGAAGAAGGAAG+AGG | 0.543970 | 4_4:+36461269 | Msa0679020:CDS |
ATCTGATTGTTCCGTTGCTG+AGG | 0.544086 | 4_4:+36460671 | Msa0679020:CDS |
AAGGAAAAGTGCCAATATTG+TGG | 0.545202 | 4_4:+36461102 | Msa0679020:CDS |
TCCGTTGCTGAGGTACCAAA+GGG | 0.545426 | 4_4:+36460681 | Msa0679020:CDS |
TTTGAACACTCAGATTCTCC+CGG | 0.546514 | 4_4:+36460847 | Msa0679020:CDS |
GGAGCCTCTTCAGCAACCAT+TGG | 0.547174 | 4_4:-36460457 | None:intergenic |
AAGTACTAAAATAGAGGCAT+TGG | 0.547433 | 4_4:+36464796 | Msa0679020:CDS |
TCCATGCTGTGAAGTGGCAA+AGG | 0.547473 | 4_4:+36461319 | Msa0679020:CDS |
GCGGTTCTTCAGAGGCTCTA+GGG | 0.548516 | 4_4:+36467024 | Msa0679020:CDS |
TTCCGTTGCTGAGGTACCAA+AGG | 0.548808 | 4_4:+36460680 | Msa0679020:CDS |
TAGGGCAGTACAAACCAATC+AGG | 0.548999 | 4_4:+36466634 | Msa0679020:CDS |
TTTCTCATGAGCTTGAAAGC+CGG | 0.550380 | 4_4:+36465494 | Msa0679020:CDS |
TTTCACCAGAAGTACTATTG+TGG | 0.550801 | 4_4:+36461153 | Msa0679020:CDS |
GAGTGGTGTAGAGAGAGCGC+TGG | 0.552036 | 4_4:+36460378 | Msa0679020:CDS |
AAAGTCCTTCCTGTGATCAA+AGG | 0.552249 | 4_4:+36460877 | Msa0679020:CDS |
TCCTTGGTGGAACCCTGCTG+TGG | 0.554359 | 4_4:+36466581 | Msa0679020:CDS |
CTTGCTGATGAAATGGGTAT+GGG | 0.555958 | 4_4:+36460757 | Msa0679020:CDS |
TCTACTTGCAGGTTTCATTG+AGG | 0.557580 | 4_4:+36462939 | Msa0679020:intron |
AAAGCATGTGATGCCTCCTA+AGG | 0.558209 | 4_4:+36461083 | Msa0679020:CDS |
TTTATCATGGGCCAAAGAGA+TGG | 0.558538 | 4_4:+36460989 | Msa0679020:CDS |
CAAGACAGAATTCACCGGAT+AGG | 0.559118 | 4_4:+36466615 | Msa0679020:CDS |
CTTGCAGGTTTCATTGAGGA+GGG | 0.559645 | 4_4:+36462943 | Msa0679020:intron |
ATAATCATCAGTGATTCTGA+TGG | 0.560233 | 4_4:+36460247 | Msa0679020:CDS |
ACAGGGCTCTATCAAGAAGA+AGG | 0.560597 | 4_4:+36461263 | Msa0679020:CDS |
CAAATTCAGAGCAACACCTC+CGG | 0.562223 | 4_4:-36465513 | None:intergenic |
AGGAAGGACTTTAGATGACC+CGG | 0.562782 | 4_4:-36460866 | None:intergenic |
CCATACCCATTTCATCAGCA+AGG | 0.563228 | 4_4:-36460756 | None:intergenic |
AGGGTCTTGATTCAAGTCAA+AGG | 0.563864 | 4_4:-36460221 | None:intergenic |
TGCTGAGGTACCAAAGGGAA+TGG | 0.566820 | 4_4:+36460686 | Msa0679020:CDS |
GGTCAGAGTTCAAAGTTGGA+TGG | 0.567173 | 4_4:+36461231 | Msa0679020:CDS |
AGAAGGAACTGGTATTTGAA+GGG | 0.570503 | 4_4:+36466903 | Msa0679020:CDS |
ACTTGCAGGTTTCATTGAGG+AGG | 0.570846 | 4_4:+36462942 | Msa0679020:intron |
AGAGGCTCTAGGGAAGTTGA+CGG | 0.572439 | 4_4:+36467034 | Msa0679020:CDS |
AATCAGATCTGACGATGCCT+CGG | 0.573266 | 4_4:-36460656 | None:intergenic |
GACTGTAGGCGGTTCTTCAG+AGG | 0.573272 | 4_4:+36467016 | Msa0679020:CDS |
AATGCAGCTGAAGACATTGG+TGG | 0.574476 | 4_4:+36460190 | Msa0679020:CDS |
ATGAATTAGCGGCTGATAAG+GGG | 0.576169 | 4_4:+36459739 | Msa0679020:intron |
TTTAATGCAGCTGAAGACAT+TGG | 0.576240 | 4_4:+36460187 | Msa0679020:CDS |
AATCACTGATGATTATAGTA+GGG | 0.576661 | 4_4:-36460240 | None:intergenic |
CATTTCTCCATGCTGTGAAG+TGG | 0.576787 | 4_4:+36461313 | Msa0679020:CDS |
CATCCGGATATGGTGATGAT+GGG | 0.576924 | 4_4:+36462739 | Msa0679020:CDS |
TGCAATCACAGTCCTTGCAC+AGG | 0.578969 | 4_4:-36462036 | None:intergenic |
CTCATGAGCTTGAAAGCCGG+AGG | 0.580044 | 4_4:+36465497 | Msa0679020:CDS |
GTTGCAATTCCCGTTTAGCA+AGG | 0.580293 | 4_4:-36460807 | None:intergenic |
GCAAAGGATCATATTGGATG+AGG | 0.582737 | 4_4:+36461335 | Msa0679020:CDS |
TCCCTTTGGTACCTCAGCAA+CGG | 0.584221 | 4_4:-36460682 | None:intergenic |
GAGCATTCTGTAACTAGAGG+TGG | 0.586266 | 4_4:+36460730 | Msa0679020:CDS |
ATAGATACTGGTAAGCTACA+TGG | 0.586499 | 4_4:-36467179 | None:intergenic |
AGTGAGTAATTTAGAGCATG+AGG | 0.586524 | 4_4:-36464666 | None:intergenic |
GCTCTCCAACACGATTCTGA+AGG | 0.586678 | 4_4:-36461808 | None:intergenic |
CAAGCATGCCATAACAACAC+TGG | 0.586806 | 4_4:-36460550 | None:intergenic |
GACTTCCAACAAGGATGCCG+TGG | 0.587500 | 4_4:+36464697 | Msa0679020:CDS |
TTGAACACTCAGATTCTCCC+GGG | 0.588872 | 4_4:+36460848 | Msa0679020:CDS |
AGTGATGAATGAGACGGCCG+AGG | 0.589406 | 4_4:+36460639 | Msa0679020:CDS |
CCCTCCTTTAATAGGACTGT+AGG | 0.590156 | 4_4:+36467002 | Msa0679020:intron |
AACTCTTGTCATCTGTCCCG+TGG | 0.591790 | 4_4:+36460900 | Msa0679020:CDS |
GAAGTGGCAAAGGATCATAT+TGG | 0.591835 | 4_4:+36461329 | Msa0679020:CDS |
CCAAAGGGAATGGTTAGCAT+GGG | 0.594360 | 4_4:+36460696 | Msa0679020:CDS |
GGTGGGAACTTGGCTAGTAA+TGG | 0.597355 | 4_4:+36464390 | Msa0679020:CDS |
AAATCTGATTCTGATTATGA+AGG | 0.599158 | 4_4:+36459834 | Msa0679020:CDS |
AAAATGCCTAACAGAACTGT+GGG | 0.602819 | 4_4:-36462557 | None:intergenic |
TGTTGATTTGACTTCCAACA+AGG | 0.605045 | 4_4:+36464688 | Msa0679020:CDS |
GGAAACATGAACATGAGAAG+TGG | 0.605491 | 4_4:+36460572 | Msa0679020:CDS |
AAAACACGGTCCAGAAAGAG+AGG | 0.605996 | 4_4:+36460325 | Msa0679020:CDS |
CCATTGAGTGACAGCAACCA+CGG | 0.609926 | 4_4:-36460917 | None:intergenic |
TCATCACTTCACTCTGATCG+AGG | 0.610619 | 4_4:-36460624 | None:intergenic |
CATTGAGTGACAGCAACCAC+GGG | 0.611625 | 4_4:-36460916 | None:intergenic |
AAGTAAATTTACCTTCTGCA+GGG | 0.612205 | 4_4:-36465313 | None:intergenic |
TGAAAGGGATGGTTCTGCAA+AGG | 0.613745 | 4_4:+36465242 | Msa0679020:CDS |
CTGCAGCAGCACTAAAAGGT+GGG | 0.619966 | 4_4:+36464373 | Msa0679020:CDS |
ACACCCCTTCAGAATCGTGT+TGG | 0.620062 | 4_4:+36461803 | Msa0679020:CDS |
GAGCCTGACGCTCCACAGCA+GGG | 0.621083 | 4_4:-36466593 | None:intergenic |
GTGAGTAATTTAGAGCATGA+GGG | 0.622262 | 4_4:-36464665 | None:intergenic |
CATCAACTACTCCCTGCAGA+AGG | 0.623237 | 4_4:+36465302 | Msa0679020:CDS |
ACTGCAGCAGCACTAAAAGG+TGG | 0.623895 | 4_4:+36464372 | Msa0679020:CDS |
ATTCCCGTTTAGCAAGGACA+AGG | 0.625183 | 4_4:-36460801 | None:intergenic |
TGATAAGGGGAAGCAGCCGA+TGG | 0.627163 | 4_4:+36459752 | Msa0679020:CDS |
CATCACTTCACTCTGATCGA+GGG | 0.628521 | 4_4:-36460623 | None:intergenic |
AAGGCGAACTAAAATAGGCA+GGG | 0.631256 | 4_4:+36462812 | Msa0679020:CDS |
CAGGAGCATTCTGTAACTAG+AGG | 0.632955 | 4_4:+36460727 | Msa0679020:CDS |
TGAGTAATTTAGAGCATGAG+GGG | 0.636418 | 4_4:-36464664 | None:intergenic |
TCCTTTAATAGGACTGTAGG+CGG | 0.636419 | 4_4:+36467005 | Msa0679020:intron |
AACGTGAAACATGAATTATG+TGG | 0.638208 | 4_4:+36467267 | Msa0679020:three_prime_UTR |
AACAAAGAGAAATTTCAAGT+CGG | 0.640962 | 4_4:-36467060 | None:intergenic |
AGGCTCAAGACAGAATTCAC+CGG | 0.644344 | 4_4:+36466610 | Msa0679020:CDS |
TGATACTGTTGAAGATCCAG+TGG | 0.645228 | 4_4:+36464443 | Msa0679020:CDS |
TGTCATTGAAAACACAATCG+AGG | 0.649039 | 4_4:+36466856 | Msa0679020:CDS |
TAAGGGGAAGCAGCCGATGG+AGG | 0.649205 | 4_4:+36459755 | Msa0679020:CDS |
TTGCTGATGAAATGGGTATG+GGG | 0.649672 | 4_4:+36460758 | Msa0679020:CDS |
CTATTCCTATAACCTGTGCA+AGG | 0.650791 | 4_4:+36462024 | Msa0679020:CDS |
GAGTGAAGTGATGAATGAGA+CGG | 0.651002 | 4_4:+36460633 | Msa0679020:CDS |
TTGAAAACACAATCGAGGAG+AGG | 0.651748 | 4_4:+36466861 | Msa0679020:CDS |
TCACCTGACGTAGTCGTGTG+AGG | 0.653741 | 4_4:-36463916 | None:intergenic |
GCGCTCTCTCTACACCACTC+AGG | 0.656151 | 4_4:-36460375 | None:intergenic |
GCGCTCTCTCTACACCACTC+AGG | 0.656940 | 4_4:-36460408 | None:intergenic |
AATAACAACATATTCTACTG+TGG | 0.657369 | 4_4:+36461047 | Msa0679020:CDS |
GGAAGGACTTTAGATGACCC+GGG | 0.658018 | 4_4:-36460865 | None:intergenic |
GAGTTCCTTTGATCACAGGA+AGG | 0.662792 | 4_4:-36460882 | None:intergenic |
TCTCCAACACGATTCTGAAG+GGG | 0.662928 | 4_4:-36461806 | None:intergenic |
TCCGGATGATTGAATTGGTG+TGG | 0.666969 | 4_4:-36462724 | None:intergenic |
TTGGATGGAGAGTTGGAACA+GGG | 0.673218 | 4_4:+36461246 | Msa0679020:CDS |
TCCACAGCAGGGTTCCACCA+AGG | 0.675941 | 4_4:-36466582 | None:intergenic |
GCGCTGGAGTTCGACCTGAG+TGG | 0.680598 | 4_4:+36460394 | Msa0679020:CDS |
TACTTTGAAAGGAAGCACGA+AGG | 0.682106 | 4_4:+36460960 | Msa0679020:CDS |
GGTGATGTTGAACAAGAATG+TGG | 0.687600 | 4_4:+36464411 | Msa0679020:CDS |
TTCCCGTTTAGCAAGGACAA+GGG | 0.690886 | 4_4:-36460800 | None:intergenic |
CCTGACGTAGTCGTGTGAGG+AGG | 0.691578 | 4_4:-36463913 | None:intergenic |
GGCTCTAGGGAAGTTGACGG+TGG | 0.703347 | 4_4:+36467037 | Msa0679020:CDS |
GGTCTTGATTCAAGTCAAAG+GGG | 0.711736 | 4_4:-36460219 | None:intergenic |
CAAGAACTCACGATCCTAGG+CGG | 0.713689 | 4_4:-36462852 | None:intergenic |
ATAGAATCTACAGACCTGAG+TGG | 0.729278 | 4_4:+36460361 | Msa0679020:CDS |
GGTTCCACCAAGGATCCATG+AGG | 0.748488 | 4_4:-36466572 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GGTTATTTTTTATTTTATAT+TGG | + | chr4_4:36463623-36463642 | Msa0679020:intron | 10.0% |
!! | TAAGAAATAAGAAATAATTA+TGG | + | chr4_4:36463982-36464001 | Msa0679020:intron | 10.0% |
!! | TTATTAATAAATGAAAACTA+AGG | + | chr4_4:36465349-36465368 | Msa0679020:intron | 10.0% |
!! | AAAAATTAAAATCAAGTATT+TGG | - | chr4_4:36467349-36467368 | None:intergenic | 10.0% |
!!! | TCATTTTCATTAATTATTAC+TGG | + | chr4_4:36459282-36459301 | Msa0679020:intron | 15.0% |
!!! | TATTTGTTTTCAATGTTTTA+TGG | + | chr4_4:36459716-36459735 | Msa0679020:intron | 15.0% |
!! | TAGAAAAATAAAGAAAACAA+TGG | + | chr4_4:36461550-36461569 | Msa0679020:intron | 15.0% |
!! | ATGACATTATATTTATTTAG+TGG | + | chr4_4:36463120-36463139 | Msa0679020:intron | 15.0% |
!! | TGACATTATATTTATTTAGT+GGG | + | chr4_4:36463121-36463140 | Msa0679020:intron | 15.0% |
!!! | TTTTTATCTTTGTTTTTTGT+TGG | + | chr4_4:36463404-36463423 | Msa0679020:intron | 15.0% |
!! | TATATAAAAAAAATCATGCA+AGG | - | chr4_4:36463809-36463828 | None:intergenic | 15.0% |
!!! | AGAAATCAGAATTTATTTTA+TGG | + | chr4_4:36463955-36463974 | Msa0679020:intron | 15.0% |
!!! | TTTTTTTTCAAATTAGAAAC+TGG | + | chr4_4:36464230-36464249 | Msa0679020:intron | 15.0% |
!!! | CATTTTGAAACAATTTTTTT+TGG | - | chr4_4:36465820-36465839 | None:intergenic | 15.0% |
!! | TTATAAATTAAAGCAAAATG+TGG | - | chr4_4:36465931-36465950 | None:intergenic | 15.0% |
!!! | TTCTATTTTGAAAATAATGT+TGG | - | chr4_4:36466739-36466758 | None:intergenic | 15.0% |
!! | TGTTAACTAAAATGAAATAA+AGG | + | chr4_4:36467306-36467325 | Msa0679020:three_prime_UTR | 15.0% |
!!! | TTTTTTTTTTTGGTTATGTT+TGG | + | chr4_4:36467365-36467384 | Msa0679020:three_prime_UTR | 15.0% |
!!! | TTTTTTTTTCTTCTGTTGTT+TGG | + | chr4_4:36458995-36459014 | Msa0679020:intron | 20.0% |
!!! | ATACTTGATTGTTTTGATTT+AGG | + | chr4_4:36459134-36459153 | Msa0679020:intron | 20.0% |
!!! | TACTTGATTGTTTTGATTTA+GGG | + | chr4_4:36459135-36459154 | Msa0679020:intron | 20.0% |
!!! | GAGAATTTTTATTTCAAATG+TGG | + | chr4_4:36459447-36459466 | Msa0679020:intron | 20.0% |
!! | TTTCTGTTATGATGAAAAAT+TGG | + | chr4_4:36460091-36460110 | Msa0679020:intron | 20.0% |
!! | AGTAAATTTGCAGTATAAAA+GGG | - | chr4_4:36460119-36460138 | None:intergenic | 20.0% |
!! | TTTACTGATAAATTTCATTC+TGG | + | chr4_4:36460133-36460152 | Msa0679020:intron | 20.0% |
!!! | TTTTCCATTAATTTGAAAAC+AGG | + | chr4_4:36461697-36461716 | Msa0679020:intron | 20.0% |
!! | ATCTTGTGTATAAAATTACA+AGG | - | chr4_4:36462654-36462673 | None:intergenic | 20.0% |
!! | GACATTATATTTATTTAGTG+GGG | + | chr4_4:36463122-36463141 | Msa0679020:intron | 20.0% |
!! | TAAAAAATAATTAAGCGTGA+AGG | - | chr4_4:36463383-36463402 | None:intergenic | 20.0% |
!!! | TCATTTTTGTAAAGGTAAAA+TGG | - | chr4_4:36463457-36463476 | None:intergenic | 20.0% |
!! | AAAAATAAATTACAGCAAGA+AGG | + | chr4_4:36463571-36463590 | Msa0679020:intron | 20.0% |
!!! | GATTTTTTTTATATAAGCCA+TGG | + | chr4_4:36463814-36463833 | Msa0679020:intron | 20.0% |
!!! | ATTAATTTAGAATCCAACAT+TGG | + | chr4_4:36464110-36464129 | Msa0679020:intron | 20.0% |
!! | ACTTATATTATATACAAGCA+CGG | - | chr4_4:36464504-36464523 | None:intergenic | 20.0% |
!!! | TTCTTTTACTATATTGATTC+AGG | + | chr4_4:36464568-36464587 | Msa0679020:intron | 20.0% |
!! | TGATAAAACAACAACAATTA+AGG | + | chr4_4:36464721-36464740 | Msa0679020:CDS | 20.0% |
!! | GATAAAACAACAACAATTAA+GGG | + | chr4_4:36464722-36464741 | Msa0679020:CDS | 20.0% |
!!! | TGATAAAAGCATTATTTTGT+TGG | - | chr4_4:36465113-36465132 | None:intergenic | 20.0% |
!!! | AAAATAATGCTTTTATCAGT+TGG | + | chr4_4:36465115-36465134 | Msa0679020:intron | 20.0% |
!! | AAATTAGATTTATGGTTGAA+AGG | + | chr4_4:36465226-36465245 | Msa0679020:CDS | 20.0% |
!! | AATTAGATTTATGGTTGAAA+GGG | + | chr4_4:36465227-36465246 | Msa0679020:CDS | 20.0% |
!! | ATCATCAGTAAATTTCTTAA+TGG | - | chr4_4:36465459-36465478 | None:intergenic | 20.0% |
!! | ACTCAACTTAAAATTAAACA+CGG | - | chr4_4:36465601-36465620 | None:intergenic | 20.0% |
!!! | TTTTTCCGTTTGTTAAATAT+AGG | + | chr4_4:36465743-36465762 | Msa0679020:intron | 20.0% |
!! | AAAAGTAATTAATAGTGCAT+TGG | - | chr4_4:36465860-36465879 | None:intergenic | 20.0% |
!! | TAGAATTGAAAGTCAATTAA+AGG | - | chr4_4:36466195-36466214 | None:intergenic | 20.0% |
!! | AATACTTATTGAATGTTTGA+TGG | + | chr4_4:36466313-36466332 | Msa0679020:intron | 20.0% |
!! | ATACTTATTGAATGTTTGAT+GGG | + | chr4_4:36466314-36466333 | Msa0679020:intron | 20.0% |
!! | AAGTTAATAGAAAAACATGT+AGG | + | chr4_4:36466778-36466797 | Msa0679020:intron | 20.0% |
!! | TGAAGCTATAATTAAATTGA+AGG | + | chr4_4:36466932-36466951 | Msa0679020:intron | 20.0% |
!!! | GATACTTGATATACATTTTT+TGG | + | chr4_4:36467121-36467140 | Msa0679020:three_prime_UTR | 20.0% |
!! | TGAAATAAAGGATATAAACT+TGG | + | chr4_4:36467318-36467337 | Msa0679020:three_prime_UTR | 20.0% |
! | AATGATAAATGAGAGAGTAA+AGG | - | chr4_4:36458939-36458958 | None:intergenic | 25.0% |
!!! | GGTTTTTTTTTTTTTTTGCG+TGG | + | chr4_4:36459415-36459434 | Msa0679020:intron | 25.0% |
!! | ATGTTTTATGGATGAATTAG+CGG | + | chr4_4:36459728-36459747 | Msa0679020:intron | 25.0% |
! | AAATCTGATTCTGATTATGA+AGG | + | chr4_4:36459834-36459853 | Msa0679020:CDS | 25.0% |
!! | TGTTATCTAGTTTATCACAA+AGG | + | chr4_4:36459929-36459948 | Msa0679020:intron | 25.0% |
!!! | TGTTTGTTGTCTTAAATTTG+AGG | + | chr4_4:36459975-36459994 | Msa0679020:intron | 25.0% |
!!! | GATTCTAGTTAATTTGTGAT+TGG | + | chr4_4:36460027-36460046 | Msa0679020:intron | 25.0% |
! | CAGTAAATTTGCAGTATAAA+AGG | - | chr4_4:36460120-36460139 | None:intergenic | 25.0% |
! | AATCACTGATGATTATAGTA+GGG | - | chr4_4:36460243-36460262 | None:intergenic | 25.0% |
! | TTAGGTAAAGGTAAATCAAA+TGG | - | chr4_4:36460481-36460500 | None:intergenic | 25.0% |
! | AAAAGCAAAGAAGACAAAAA+AGG | + | chr4_4:36460516-36460535 | Msa0679020:CDS | 25.0% |
! | AAAGCAAAGAAGACAAAAAA+GGG | + | chr4_4:36460517-36460536 | Msa0679020:CDS | 25.0% |
! | AATAACAACATATTCTACTG+TGG | + | chr4_4:36461047-36461066 | Msa0679020:CDS | 25.0% |
! | GAAATAATCTTCCACAATAT+TGG | - | chr4_4:36461116-36461135 | None:intergenic | 25.0% |
! | GTTGTGATAATATAGCATTA+TGG | + | chr4_4:36461361-36461380 | Msa0679020:intron | 25.0% |
! | TCTATAACAGTAGTTAAACA+AGG | - | chr4_4:36461534-36461553 | None:intergenic | 25.0% |
!!! | CAAAAAGAGCATTGAATATA+CGG | - | chr4_4:36462092-36462111 | None:intergenic | 25.0% |
!!! | TTTTTGGAATCTAATTTAGC+AGG | + | chr4_4:36462106-36462125 | Msa0679020:intron | 25.0% |
! | AAAAACTACTACAATCTTGA+AGG | + | chr4_4:36462243-36462262 | Msa0679020:intron | 25.0% |
!!! | ATATGATATGCCTTCTTTTT+TGG | + | chr4_4:36462315-36462334 | Msa0679020:intron | 25.0% |
!!! | TTTTAAAGAGCATAGTCTTA+AGG | + | chr4_4:36462793-36462812 | Msa0679020:CDS | 25.0% |
! | AGAAATTCATACTTAGTCAT+CGG | - | chr4_4:36462882-36462901 | None:intergenic | 25.0% |
! | TTATATTTATTTAGTGGGGT+TGG | + | chr4_4:36463126-36463145 | Msa0679020:intron | 25.0% |
!! | TTTATTGTTGATTGTTGGTT+AGG | + | chr4_4:36463224-36463243 | Msa0679020:intron | 25.0% |
!!! | TCTTTGTTTTTTGTTGGTAT+AGG | + | chr4_4:36463410-36463429 | Msa0679020:intron | 25.0% |
!! | TTTTGTAAAGGTAAAATGGT+GGG | - | chr4_4:36463453-36463472 | None:intergenic | 25.0% |
!! | TTTTTGTAAAGGTAAAATGG+TGG | - | chr4_4:36463454-36463473 | None:intergenic | 25.0% |
! | TACCTTTACAAAAATGAAGA+TGG | + | chr4_4:36463460-36463479 | Msa0679020:intron | 25.0% |
!!! | TTCCATCTTCATTTTTGTAA+AGG | - | chr4_4:36463465-36463484 | None:intergenic | 25.0% |
! | CAAAAATGAAGATGGAAAAT+TGG | + | chr4_4:36463468-36463487 | Msa0679020:intron | 25.0% |
! | ATTGGAAGGAAAATAAATGA+CGG | + | chr4_4:36463486-36463505 | Msa0679020:intron | 25.0% |
!! | TTTGTCACAGTTATCTTTTT+CGG | + | chr4_4:36463546-36463565 | Msa0679020:intron | 25.0% |
!! | TAATGTTAATAGCAGGTTTT+GGG | - | chr4_4:36463687-36463706 | None:intergenic | 25.0% |
!! | TTAATGTTAATAGCAGGTTT+TGG | - | chr4_4:36463688-36463707 | None:intergenic | 25.0% |
! | AAAGCAAATTCATAAAACCA+TGG | - | chr4_4:36463834-36463853 | None:intergenic | 25.0% |
! | CAAGAACAGTAATCATAAAT+TGG | + | chr4_4:36464256-36464275 | Msa0679020:intron | 25.0% |
! | ACAGTAATCATAAATTGGAA+AGG | + | chr4_4:36464261-36464280 | Msa0679020:intron | 25.0% |
! | AGTAGTACATTAAAATTAGC+AGG | - | chr4_4:36464531-36464550 | None:intergenic | 25.0% |
!!! | GGTATGTATAAATTTGTTGT+TGG | + | chr4_4:36464817-36464836 | Msa0679020:intron | 25.0% |
! | GAGAGAAGAAATTAGATTTA+TGG | + | chr4_4:36465218-36465237 | Msa0679020:intron | 25.0% |
!! | ATGAGAAAAATTTTGCAATC+TGG | - | chr4_4:36465482-36465501 | None:intergenic | 25.0% |
! | TATGTTCTACAATTCTATTC+AGG | + | chr4_4:36465698-36465717 | Msa0679020:intron | 25.0% |
! | CAGAACCTATATTTAACAAA+CGG | - | chr4_4:36465751-36465770 | None:intergenic | 25.0% |
! | TGTTAAATATAGGTTCTGTT+TGG | + | chr4_4:36465753-36465772 | Msa0679020:intron | 25.0% |
!!! | AATAAATAAGGGGTACTATT+GGG | - | chr4_4:36465884-36465903 | None:intergenic | 25.0% |
!!! | TAATAAATAAGGGGTACTAT+TGG | - | chr4_4:36465885-36465904 | None:intergenic | 25.0% |
! | TGTGCATAGTAATAAATAAG+GGG | - | chr4_4:36465894-36465913 | None:intergenic | 25.0% |
! | GTGTGCATAGTAATAAATAA+GGG | - | chr4_4:36465895-36465914 | None:intergenic | 25.0% |
! | AGTGTGCATAGTAATAAATA+AGG | - | chr4_4:36465896-36465915 | None:intergenic | 25.0% |
! | AAATTAAAGCAAAATGTGGT+AGG | - | chr4_4:36465927-36465946 | None:intergenic | 25.0% |
!!! | AAAATAGCCTTGTTAACTAT+TGG | - | chr4_4:36465968-36465987 | None:intergenic | 25.0% |
! | TTCAAAATGAGTTTCGTTTA+AGG | - | chr4_4:36466049-36466068 | None:intergenic | 25.0% |
!!! | AAACGAAACTCATTTTGAAA+CGG | + | chr4_4:36466050-36466069 | Msa0679020:intron | 25.0% |
! | TCAATTAAAGGACAAACTAT+GGG | - | chr4_4:36466183-36466202 | None:intergenic | 25.0% |
! | ATTGGATAAAAATAGAAAGC+AGG | - | chr4_4:36466267-36466286 | None:intergenic | 25.0% |
! | TACATCAAAGGATTAAATAG+CGG | - | chr4_4:36466443-36466462 | None:intergenic | 25.0% |
!!! | TTATTTTGCCATTCTTAAGT+TGG | + | chr4_4:36466495-36466514 | Msa0679020:intron | 25.0% |
!! | TATTTTGCCATTCTTAAGTT+GGG | + | chr4_4:36466496-36466515 | Msa0679020:intron | 25.0% |
! | TCTGTACATGAAAATAATGT+TGG | - | chr4_4:36466705-36466724 | None:intergenic | 25.0% |
!! | AACAAAGAGAAATTTCAAGT+CGG | - | chr4_4:36467063-36467082 | None:intergenic | 25.0% |
! | TTAGCTGTAAGTAGATATAT+TGG | + | chr4_4:36467222-36467241 | Msa0679020:three_prime_UTR | 25.0% |
!! | TGTTTCACGTTTGAATTTTT+GGG | - | chr4_4:36467258-36467277 | None:intergenic | 25.0% |
!! | ATGTTTCACGTTTGAATTTT+TGG | - | chr4_4:36467259-36467278 | None:intergenic | 25.0% |
!!! | TGCACTGTTGTTTTATGAAT+CGG | - | chr4_4:36458744-36458763 | None:intergenic | 30.0% |
GAGAGAGAAAGTGATAATTA+GGG | - | chr4_4:36458822-36458841 | None:intergenic | 30.0% | |
AGAGAGAGAAAGTGATAATT+AGG | - | chr4_4:36458823-36458842 | None:intergenic | 30.0% | |
AAATCTGAATTGTGATAGCA+AGG | + | chr4_4:36459107-36459126 | Msa0679020:intron | 30.0% | |
AATCTGAATTGTGATAGCAA+GGG | + | chr4_4:36459108-36459127 | Msa0679020:intron | 30.0% | |
TTGAATGTAATTGCATGTGT+CGG | - | chr4_4:36459257-36459276 | None:intergenic | 30.0% | |
TCAGTTTCACTGATAATTGT+CGG | + | chr4_4:36459333-36459352 | Msa0679020:intron | 30.0% | |
! | TCATTTTCAGTGATAATTGC+CGG | + | chr4_4:36459535-36459554 | Msa0679020:intron | 30.0% |
!!! | TTTTTATTTCTAATGCAGCG+CGG | + | chr4_4:36459661-36459680 | Msa0679020:intron | 30.0% |
! | TTTTCATCAATATCCTCCAT+CGG | - | chr4_4:36459771-36459790 | None:intergenic | 30.0% |
GACTTCAAACACATGAATAA+AGG | - | chr4_4:36459871-36459890 | None:intergenic | 30.0% | |
AATGAGGAGTGAAATTTACT+TGG | + | chr4_4:36460056-36460075 | Msa0679020:intron | 30.0% | |
GAATCACTGATGATTATAGT+AGG | - | chr4_4:36460244-36460263 | None:intergenic | 30.0% | |
ATAATCATCAGTGATTCTGA+TGG | + | chr4_4:36460247-36460266 | Msa0679020:CDS | 30.0% | |
!!! | TTCTTTGCTTTTTTCTTCCT+TGG | - | chr4_4:36460508-36460527 | None:intergenic | 30.0% |
ATTGCTCGATTTACTTTGAA+AGG | + | chr4_4:36460949-36460968 | Msa0679020:CDS | 30.0% | |
AACATATTCTACTGTGGAAT+CGG | + | chr4_4:36461053-36461072 | Msa0679020:CDS | 30.0% | |
TTCTGGTGAAAAACTAAACT+AGG | - | chr4_4:36461144-36461163 | None:intergenic | 30.0% | |
CAAACCAAGAAAAAGAAAAG+AGG | + | chr4_4:36461210-36461229 | Msa0679020:CDS | 30.0% | |
! | TACTTTTCAGAAAGACAAAG+TGG | - | chr4_4:36461415-36461434 | None:intergenic | 30.0% |
! | CTTACGTTAGTTTAGAAACA+GGG | - | chr4_4:36461494-36461513 | None:intergenic | 30.0% |
! | ACTTACGTTAGTTTAGAAAC+AGG | - | chr4_4:36461495-36461514 | None:intergenic | 30.0% |
! | TGTGCCTGTTTTCAAATTAA+TGG | - | chr4_4:36461704-36461723 | None:intergenic | 30.0% |
AGGCACACTTTATAAAATCT+AGG | + | chr4_4:36461717-36461736 | Msa0679020:intron | 30.0% | |
CTTAGAGTCTTTCTACAAAT+GGG | + | chr4_4:36461769-36461788 | Msa0679020:CDS | 30.0% | |
! | TGGTAAATTACCAGTCTTTT+TGG | + | chr4_4:36461840-36461859 | Msa0679020:intron | 30.0% |
TATATTACTGCCAAAAAGAC+TGG | - | chr4_4:36461853-36461872 | None:intergenic | 30.0% | |
GCATTGTATTCGAATTATGT+TGG | - | chr4_4:36461968-36461987 | None:intergenic | 30.0% | |
! | CGTATATTCAATGCTCTTTT+TGG | + | chr4_4:36462090-36462109 | Msa0679020:intron | 30.0% |
TGAATATCCTCCAAAAAAGA+AGG | - | chr4_4:36462328-36462347 | None:intergenic | 30.0% | |
TTCAAACAGAGAAAACACTT+CGG | - | chr4_4:36462407-36462426 | None:intergenic | 30.0% | |
TTCTCTCATTCTCTCTAATA+TGG | - | chr4_4:36462623-36462642 | None:intergenic | 30.0% | |
GAAATTCATACTTAGTCATC+GGG | - | chr4_4:36462881-36462900 | None:intergenic | 30.0% | |
ATCACTATACAATGAAAGTC+AGG | + | chr4_4:36463000-36463019 | Msa0679020:CDS | 30.0% | |
! | ACATTTTAGGCAGTAAGATA+AGG | - | chr4_4:36463051-36463070 | None:intergenic | 30.0% |
TTATCTTACTGCCTAAAATG+TGG | + | chr4_4:36463050-36463069 | Msa0679020:intron | 30.0% | |
! | ACTGCATTTTACCACATTTT+AGG | - | chr4_4:36463064-36463083 | None:intergenic | 30.0% |
! | TCAGGTTTATTGTTGATTGT+TGG | + | chr4_4:36463219-36463238 | Msa0679020:intron | 30.0% |
AATGAAAGGAAATAAACCAG+AGG | - | chr4_4:36463276-36463295 | None:intergenic | 30.0% | |
ATACTTCCTCTTTCAATTGA+CGG | + | chr4_4:36463332-36463351 | Msa0679020:intron | 30.0% | |
AATGAAGATGGAAAATTGGA+AGG | + | chr4_4:36463472-36463491 | Msa0679020:intron | 30.0% | |
AAAAGATAACTGTGACAAAC+AGG | - | chr4_4:36463545-36463564 | None:intergenic | 30.0% | |
TAAATTACAGCAAGAAGGAA+AGG | + | chr4_4:36463576-36463595 | Msa0679020:intron | 30.0% | |
!! | CTCTATAATTACTTTTCCTG+AGG | - | chr4_4:36463604-36463623 | None:intergenic | 30.0% |
CTCAGGAAAAGTAATTATAG+AGG | + | chr4_4:36463602-36463621 | Msa0679020:intron | 30.0% | |
! | AATGTTAATAGCAGGTTTTG+GGG | - | chr4_4:36463686-36463705 | None:intergenic | 30.0% |
CTGTCTTTAATGTTAATAGC+AGG | - | chr4_4:36463694-36463713 | None:intergenic | 30.0% | |
!! | ACAGCTATTTAATTTGAGCA+TGG | - | chr4_4:36463747-36463766 | None:intergenic | 30.0% |
TATGGAAACTCTCGAAATAT+TGG | + | chr4_4:36464000-36464019 | Msa0679020:intron | 30.0% | |
!!! | CTTTTTTAGTTTTTCCTTGC+TGG | + | chr4_4:36464084-36464103 | Msa0679020:intron | 30.0% |
TCTAAATTAATTCACCAGCA+AGG | - | chr4_4:36464101-36464120 | None:intergenic | 30.0% | |
!! | ATTGGTGTGGAAATTAGTTT+TGG | + | chr4_4:36464128-36464147 | Msa0679020:intron | 30.0% |
AGAAAATATGTACTAACCAC+TGG | - | chr4_4:36464462-36464481 | None:intergenic | 30.0% | |
AGTACATTAAAATTAGCAGG+AGG | - | chr4_4:36464528-36464547 | None:intergenic | 30.0% | |
! | ATAGATTTTTCTGCTTCGTT+AGG | + | chr4_4:36464629-36464648 | Msa0679020:CDS | 30.0% |
!!! | TGTTGTTGTTTTATCAACCA+CGG | - | chr4_4:36464717-36464736 | None:intergenic | 30.0% |
! | GATCTTCAAGCATTTTAAAC+AGG | + | chr4_4:36464750-36464769 | Msa0679020:CDS | 30.0% |
TCAGACAAGTACTAAAATAG+AGG | + | chr4_4:36464790-36464809 | Msa0679020:CDS | 30.0% | |
! | AAGTACTAAAATAGAGGCAT+TGG | + | chr4_4:36464796-36464815 | Msa0679020:CDS | 30.0% |
ATATTAAGCGTCTTTATTCC+TGG | + | chr4_4:36464855-36464874 | Msa0679020:intron | 30.0% | |
TAGAACTATTTATACTTGCC+AGG | - | chr4_4:36464876-36464895 | None:intergenic | 30.0% | |
ATTTATCAATTGCATCTTGC+AGG | - | chr4_4:36464926-36464945 | None:intergenic | 30.0% | |
!!! | ACATTTTGATTTTCTGCAAG+TGG | + | chr4_4:36464966-36464985 | Msa0679020:intron | 30.0% |
!!! | CATTTTGATTTTCTGCAAGT+GGG | + | chr4_4:36464967-36464986 | Msa0679020:intron | 30.0% |
!!! | ATTTTGATTTTCTGCAAGTG+GGG | + | chr4_4:36464968-36464987 | Msa0679020:intron | 30.0% |
! | TGACTAAGAAGTAAGGTTTT+GGG | + | chr4_4:36465023-36465042 | Msa0679020:intron | 30.0% |
CGTAAAATATATGCACTTGA+CGG | - | chr4_4:36465151-36465170 | None:intergenic | 30.0% | |
AAGTAAATTTACCTTCTGCA+GGG | - | chr4_4:36465316-36465335 | None:intergenic | 30.0% | |
! | AAGTTGAGTTGTGAAATATC+CGG | + | chr4_4:36465612-36465631 | Msa0679020:intron | 30.0% |
CATATGATGAGCTCATAAAA+TGG | - | chr4_4:36465682-36465701 | None:intergenic | 30.0% | |
TTCTACAATTCTATTCAGGA+TGG | + | chr4_4:36465702-36465721 | Msa0679020:intron | 30.0% | |
TCTACAATTCTATTCAGGAT+GGG | + | chr4_4:36465703-36465722 | Msa0679020:intron | 30.0% | |
!! | AAACGACACTCATTTTGAAA+CGG | - | chr4_4:36465794-36465813 | None:intergenic | 30.0% |
AAATGCACCAATAGTTAACA+AGG | + | chr4_4:36465958-36465977 | Msa0679020:intron | 30.0% | |
!! | GAGTAGCAAATAGTTGATAA+GGG | + | chr4_4:36466076-36466095 | Msa0679020:intron | 30.0% |
!! | AGTAGCAAATAGTTGATAAG+GGG | + | chr4_4:36466077-36466096 | Msa0679020:intron | 30.0% |
!! | CTATTTGCTAAGACATGTTT+TGG | - | chr4_4:36466159-36466178 | None:intergenic | 30.0% |
GTCAATTAAAGGACAAACTA+TGG | - | chr4_4:36466184-36466203 | None:intergenic | 30.0% | |
TAATAGAAAAACATGTAGGC+TGG | + | chr4_4:36466782-36466801 | Msa0679020:intron | 30.0% | |
! | TTTCTCTTTGTTACTTAAGC+TGG | + | chr4_4:36467071-36467090 | Msa0679020:exon | 30.0% |
AACGTGAAACATGAATTATG+TGG | + | chr4_4:36467267-36467286 | Msa0679020:three_prime_UTR | 30.0% | |
TTTGGTTATGTTTGGATTGA+CGG | + | chr4_4:36467373-36467392 | Msa0679020:three_prime_UTR | 30.0% | |
!!! | ACTGTTGTTTTATGAATCGG+CGG | - | chr4_4:36458741-36458760 | None:intergenic | 35.0% |
GTGCTACAGAAAATCAAACA+TGG | - | chr4_4:36459180-36459199 | None:intergenic | 35.0% | |
TTGAGGAAATGTTTGTGATG+TGG | + | chr4_4:36459992-36460011 | Msa0679020:intron | 35.0% | |
TGAGGAAATGTTTGTGATGT+GGG | + | chr4_4:36459993-36460012 | Msa0679020:intron | 35.0% | |
TTGTGATTGGACTTTGAATG+AGG | + | chr4_4:36460040-36460059 | Msa0679020:intron | 35.0% | |
TTTAATGCAGCTGAAGACAT+TGG | + | chr4_4:36460187-36460206 | Msa0679020:CDS | 35.0% | |
TCTGATTCATCTGACTTTAG+CGG | + | chr4_4:36460283-36460302 | Msa0679020:CDS | 35.0% | |
! | GTTTTTCTCCGTTTAGATGA+AGG | - | chr4_4:36460310-36460329 | None:intergenic | 35.0% |
CATCTAAACGGAGAAAAACA+CGG | + | chr4_4:36460311-36460330 | Msa0679020:CDS | 35.0% | |
! | CGATGATGAGTTATTTCCAA+TGG | + | chr4_4:36460441-36460460 | Msa0679020:CDS | 35.0% |
! | ATCCTAAACCAGTGTTGTTA+TGG | + | chr4_4:36460542-36460561 | Msa0679020:CDS | 35.0% |
! | CAATATTGGCACTTTTCCTT+AGG | - | chr4_4:36461102-36461121 | None:intergenic | 35.0% |
!! | AAGGAAAAGTGCCAATATTG+TGG | + | chr4_4:36461102-36461121 | Msa0679020:CDS | 35.0% |
TGGTGAAAAACTAAACTAGG+CGG | - | chr4_4:36461141-36461160 | None:intergenic | 35.0% | |
!! | TTTCACCAGAAGTACTATTG+TGG | + | chr4_4:36461153-36461172 | Msa0679020:CDS | 35.0% |
!! | TTCACCAGAAGTACTATTGT+GGG | + | chr4_4:36461154-36461173 | Msa0679020:CDS | 35.0% |
!! | TTTGTTGTTCTAATAGCGTC+AGG | - | chr4_4:36461180-36461199 | None:intergenic | 35.0% |
! | CTGACCTCTTTTCTTTTTCT+TGG | - | chr4_4:36461217-36461236 | None:intergenic | 35.0% |
AAGAAGGAAGAGGATTTAGA+AGG | + | chr4_4:36461279-36461298 | Msa0679020:CDS | 35.0% | |
CCATTTGTAGAAAGACTCTA+AGG | - | chr4_4:36461771-36461790 | None:intergenic | 35.0% | |
CCTTAGAGTCTTTCTACAAA+TGG | + | chr4_4:36461768-36461787 | Msa0679020:CDS | 35.0% | |
TTCTACAAATGGGCATTAAG+TGG | + | chr4_4:36461779-36461798 | Msa0679020:CDS | 35.0% | |
TGTTGGAGAGCTATATTCTT+TGG | + | chr4_4:36461820-36461839 | Msa0679020:CDS | 35.0% | |
ATACAATGCCATGTTTATGC+AGG | + | chr4_4:36461979-36461998 | Msa0679020:intron | 35.0% | |
AAATCGTACCTGCATAAACA+TGG | - | chr4_4:36461990-36462009 | None:intergenic | 35.0% | |
TTGCACAGGTTATAGGAATA+GGG | - | chr4_4:36462025-36462044 | None:intergenic | 35.0% | |
! | AGAAGGCATATCATATGTCT+CGG | - | chr4_4:36462311-36462330 | None:intergenic | 35.0% |
!!! | TGATATGCCTTCTTTTTTGG+AGG | + | chr4_4:36462318-36462337 | Msa0679020:intron | 35.0% |
GCAGTTTGAACATACTTTAG+AGG | - | chr4_4:36462536-36462555 | None:intergenic | 35.0% | |
AAAATGCCTAACAGAACTGT+GGG | - | chr4_4:36462560-36462579 | None:intergenic | 35.0% | |
AAAAATGCCTAACAGAACTG+TGG | - | chr4_4:36462561-36462580 | None:intergenic | 35.0% | |
! | GTTCTGTTAGGCATTTTTGT+TGG | + | chr4_4:36462563-36462582 | Msa0679020:CDS | 35.0% |
GTCTTAAGGCGAACTAAAAT+AGG | + | chr4_4:36462807-36462826 | Msa0679020:CDS | 35.0% | |
TCTACAACATTTCTACTTGC+AGG | + | chr4_4:36462928-36462947 | Msa0679020:intron | 35.0% | |
! | AGTCTTGCTCTTTTATATCC+AGG | - | chr4_4:36462973-36462992 | None:intergenic | 35.0% |
AAATCACCAAACTGTTAGTG+AGG | + | chr4_4:36463160-36463179 | Msa0679020:intron | 35.0% | |
AATCACCAAACTGTTAGTGA+GGG | + | chr4_4:36463161-36463180 | Msa0679020:intron | 35.0% | |
CACAAAGGATCTACAATGAA+AGG | - | chr4_4:36463290-36463309 | None:intergenic | 35.0% | |
ATCCTTTGTGCTCAATTTAC+AGG | + | chr4_4:36463300-36463319 | Msa0679020:intron | 35.0% | |
ATCCTGTAAATTGAGCACAA+AGG | - | chr4_4:36463305-36463324 | None:intergenic | 35.0% | |
TACTTCCTCTTTCAATTGAC+GGG | + | chr4_4:36463333-36463352 | Msa0679020:intron | 35.0% | |
ACTCAAGTCAAACGTTAAAC+TGG | + | chr4_4:36463646-36463665 | Msa0679020:intron | 35.0% | |
!! | GAATTTGCTTTCTCTTTTGC+AGG | + | chr4_4:36463843-36463862 | Msa0679020:intron | 35.0% |
CAAAATACAAAAGCGATGCA+TGG | - | chr4_4:36464026-36464045 | None:intergenic | 35.0% | |
! | TTTAGAATCCAACATTGGTG+TGG | + | chr4_4:36464115-36464134 | Msa0679020:intron | 35.0% |
ACTAATTTCCACACCAATGT+TGG | - | chr4_4:36464126-36464145 | None:intergenic | 35.0% | |
! | CATCTCTGGCTTAAATATAC+AGG | + | chr4_4:36464314-36464333 | Msa0679020:intron | 35.0% |
GGAGAATACACTACAAGATA+TGG | - | chr4_4:36464351-36464370 | None:intergenic | 35.0% | |
! | TGAGTAATTTAGAGCATGAG+GGG | - | chr4_4:36464667-36464686 | None:intergenic | 35.0% |
! | GTGAGTAATTTAGAGCATGA+GGG | - | chr4_4:36464668-36464687 | None:intergenic | 35.0% |
! | AGTGAGTAATTTAGAGCATG+AGG | - | chr4_4:36464669-36464688 | None:intergenic | 35.0% |
!! | TGTTGATTTGACTTCCAACA+AGG | + | chr4_4:36464688-36464707 | Msa0679020:CDS | 35.0% |
AATTGCATCTTGCAGGTAAA+AGG | - | chr4_4:36464919-36464938 | None:intergenic | 35.0% | |
AACCTTACTTCTTAGTCACA+TGG | - | chr4_4:36465021-36465040 | None:intergenic | 35.0% | |
! | GTGACTAAGAAGTAAGGTTT+TGG | + | chr4_4:36465022-36465041 | Msa0679020:intron | 35.0% |
! | GACTAAGAAGTAAGGTTTTG+GGG | + | chr4_4:36465024-36465043 | Msa0679020:intron | 35.0% |
!! | ACTAAGAAGTAAGGTTTTGG+GGG | + | chr4_4:36465025-36465044 | Msa0679020:intron | 35.0% |
AGATTTATGGTTGAAAGGGA+TGG | + | chr4_4:36465231-36465250 | Msa0679020:CDS | 35.0% | |
CAAGTAAATTTACCTTCTGC+AGG | - | chr4_4:36465317-36465336 | None:intergenic | 35.0% | |
GAAAACTAAGGATGATGACA+TGG | + | chr4_4:36465361-36465380 | Msa0679020:intron | 35.0% | |
AGGTGTATCTTGTGTTCAAT+TGG | + | chr4_4:36465400-36465419 | Msa0679020:CDS | 35.0% | |
GTATCTTGTGTTCAATTGGT+TGG | + | chr4_4:36465404-36465423 | Msa0679020:CDS | 35.0% | |
GAAGTATGACATTAACTGCT+CGG | + | chr4_4:36465426-36465445 | Msa0679020:CDS | 35.0% | |
AAGTATGACATTAACTGCTC+GGG | + | chr4_4:36465427-36465446 | Msa0679020:CDS | 35.0% | |
TATGTTCTACTAGTCGCATT+TGG | + | chr4_4:36465638-36465657 | Msa0679020:intron | 35.0% | |
CAGGATGGGAGTTTAATTAT+TGG | + | chr4_4:36465717-36465736 | Msa0679020:intron | 35.0% | |
TAAAGCAAAATGTGGTAGGT+TGG | - | chr4_4:36465923-36465942 | None:intergenic | 35.0% | |
!!! | GAAACTCATTTTGAAACGGA+GGG | + | chr4_4:36466054-36466073 | Msa0679020:intron | 35.0% |
! | GGAGTAGCAAATAGTTGATA+AGG | + | chr4_4:36466075-36466094 | Msa0679020:intron | 35.0% |
!! | AATAGTTGATAAGGGGATAG+CGG | + | chr4_4:36466084-36466103 | Msa0679020:intron | 35.0% |
AAAATAGAAAGCAGGATAGC+AGG | - | chr4_4:36466259-36466278 | None:intergenic | 35.0% | |
TATCCAATGTTTGACCCAAA+CGG | + | chr4_4:36466279-36466298 | Msa0679020:intron | 35.0% | |
ATTCAACAAGTAGTCCGTTT+GGG | - | chr4_4:36466296-36466315 | None:intergenic | 35.0% | |
TATTCAACAAGTAGTCCGTT+TGG | - | chr4_4:36466297-36466316 | None:intergenic | 35.0% | |
TCAATGGTGAAAACAGTTCA+CGG | - | chr4_4:36466359-36466378 | None:intergenic | 35.0% | |
ACTGTCACAATCTACATCAA+AGG | - | chr4_4:36466455-36466474 | None:intergenic | 35.0% | |
AGAGAAACCCAACTTAAGAA+TGG | - | chr4_4:36466506-36466525 | None:intergenic | 35.0% | |
TGTCATTGAAAACACAATCG+AGG | + | chr4_4:36466856-36466875 | Msa0679020:CDS | 35.0% | |
CTTGAAACTTCAAGAGAAGA+AGG | + | chr4_4:36466886-36466905 | Msa0679020:CDS | 35.0% | |
AAGAAGGAACTGGTATTTGA+AGG | + | chr4_4:36466902-36466921 | Msa0679020:CDS | 35.0% | |
AGAAGGAACTGGTATTTGAA+GGG | + | chr4_4:36466903-36466922 | Msa0679020:CDS | 35.0% | |
TATTAAAGGAGGGACAACAA+AGG | - | chr4_4:36466995-36467014 | None:intergenic | 35.0% | |
! | TTTGTTGTCCCTCCTTTAAT+AGG | + | chr4_4:36466994-36467013 | Msa0679020:intron | 35.0% |
! | AATTTTCCAGTTACCCTATC+AGG | - | chr4_4:36467097-36467116 | None:intergenic | 35.0% |
ATAGATACTGGTAAGCTACA+TGG | - | chr4_4:36467182-36467201 | None:intergenic | 35.0% | |
ACAACGAAGTGATGTATGTT+AGG | + | chr4_4:36467405-36467424 | Msa0679020:three_prime_UTR | 35.0% | |
!!! | CTGTTGTTTTATGAATCGGC+GGG | - | chr4_4:36458740-36458759 | None:intergenic | 40.0% |
!!! | TGAAGAACGGTTTTTGGGAT+GGG | - | chr4_4:36458790-36458809 | None:intergenic | 40.0% |
!! | ATGAAGAACGGTTTTTGGGA+TGG | - | chr4_4:36458791-36458810 | None:intergenic | 40.0% |
! | GCGAATGAAGAACGGTTTTT+GGG | - | chr4_4:36458795-36458814 | None:intergenic | 40.0% |
! | TGCGAATGAAGAACGGTTTT+TGG | - | chr4_4:36458796-36458815 | None:intergenic | 40.0% |
! | AGGGTTTTGCGAATGAAGAA+CGG | - | chr4_4:36458803-36458822 | None:intergenic | 40.0% |
! | GCTTCAGATGAAATCGATTC+TGG | + | chr4_4:36458894-36458913 | Msa0679020:CDS | 40.0% |
!! | TAATTGCATGTGTCGGTTGT+CGG | - | chr4_4:36459250-36459269 | None:intergenic | 40.0% |
GTGCTTTGTAGGTTCGATTT+GGG | + | chr4_4:36459394-36459413 | Msa0679020:intron | 40.0% | |
ACACACTAACACATCAACAC+CGG | - | chr4_4:36459557-36459576 | None:intergenic | 40.0% | |
TGTTGATGTGTTAGTGTGTC+AGG | + | chr4_4:36459558-36459577 | Msa0679020:intron | 40.0% | |
GGTGCTTCATAAGTTCGATT+TGG | + | chr4_4:36459600-36459619 | Msa0679020:intron | 40.0% | |
GATGAATTAGCGGCTGATAA+GGG | + | chr4_4:36459738-36459757 | Msa0679020:intron | 40.0% | |
ATGAATTAGCGGCTGATAAG+GGG | + | chr4_4:36459739-36459758 | Msa0679020:intron | 40.0% | |
GGTCTTGATTCAAGTCAAAG+GGG | - | chr4_4:36460222-36460241 | None:intergenic | 40.0% | |
GGGTCTTGATTCAAGTCAAA+GGG | - | chr4_4:36460223-36460242 | None:intergenic | 40.0% | |
AGGGTCTTGATTCAAGTCAA+AGG | - | chr4_4:36460224-36460243 | None:intergenic | 40.0% | |
CTGATTCATCTGACTTTAGC+GGG | + | chr4_4:36460284-36460303 | Msa0679020:CDS | 40.0% | |
GGATTTACTACCTCTCTTTC+TGG | - | chr4_4:36460338-36460357 | None:intergenic | 40.0% | |
CAGGTCTGTAGATTCTATCT+TGG | - | chr4_4:36460359-36460378 | None:intergenic | 40.0% | |
ATAGAATCTACAGACCTGAG+TGG | + | chr4_4:36460361-36460380 | Msa0679020:CDS | 40.0% | |
ATTTCCAATGGTTGCTGAAG+AGG | + | chr4_4:36460453-36460472 | Msa0679020:CDS | 40.0% | |
! | TTTTTCTTCCTTGGCAGCTT+AGG | - | chr4_4:36460499-36460518 | None:intergenic | 40.0% |
!! | TGCCATAACAACACTGGTTT+AGG | - | chr4_4:36460547-36460566 | None:intergenic | 40.0% |
GGAAACATGAACATGAGAAG+TGG | + | chr4_4:36460572-36460591 | Msa0679020:CDS | 40.0% | |
GTGGATCGATCAGAATTTGT+TGG | + | chr4_4:36460591-36460610 | Msa0679020:CDS | 40.0% | |
GAGTGAAGTGATGAATGAGA+CGG | + | chr4_4:36460633-36460652 | Msa0679020:CDS | 40.0% | |
TGGAATCCTTGCTGATGAAA+TGG | + | chr4_4:36460750-36460769 | Msa0679020:CDS | 40.0% | |
GGAATCCTTGCTGATGAAAT+GGG | + | chr4_4:36460751-36460770 | Msa0679020:CDS | 40.0% | |
CTTGCTGATGAAATGGGTAT+GGG | + | chr4_4:36460757-36460776 | Msa0679020:CDS | 40.0% | |
TTGCTGATGAAATGGGTATG+GGG | + | chr4_4:36460758-36460777 | Msa0679020:CDS | 40.0% | |
GGAGAATCTGAGTGTTCAAA+TGG | - | chr4_4:36460847-36460866 | None:intergenic | 40.0% | |
TTTGAACACTCAGATTCTCC+CGG | + | chr4_4:36460847-36460866 | Msa0679020:CDS | 40.0% | |
AAAGTCCTTCCTGTGATCAA+AGG | + | chr4_4:36460877-36460896 | Msa0679020:CDS | 40.0% | |
ACAAGAGTTCCTTTGATCAC+AGG | - | chr4_4:36460889-36460908 | None:intergenic | 40.0% | |
! | TACTTTGAAAGGAAGCACGA+AGG | + | chr4_4:36460960-36460979 | Msa0679020:CDS | 40.0% |
!! | ACGAAGGTTCTGGTTTATCA+TGG | + | chr4_4:36460976-36460995 | Msa0679020:CDS | 40.0% |
!! | CGAAGGTTCTGGTTTATCAT+GGG | + | chr4_4:36460977-36460996 | Msa0679020:CDS | 40.0% |
TTTATCATGGGCCAAAGAGA+TGG | + | chr4_4:36460989-36461008 | Msa0679020:CDS | 40.0% | |
! | TATTGGCACTTTTCCTTAGG+AGG | - | chr4_4:36461099-36461118 | None:intergenic | 40.0% |
GGTGAAAAACTAAACTAGGC+GGG | - | chr4_4:36461140-36461159 | None:intergenic | 40.0% | |
AAGAGGTCAGAGTTCAAAGT+TGG | + | chr4_4:36461227-36461246 | Msa0679020:CDS | 40.0% | |
TTCAAAGTTGGATGGAGAGT+TGG | + | chr4_4:36461239-36461258 | Msa0679020:CDS | 40.0% | |
CTCTATCAAGAAGAAGGAAG+AGG | + | chr4_4:36461269-36461288 | Msa0679020:CDS | 40.0% | |
GAAGTGGCAAAGGATCATAT+TGG | + | chr4_4:36461329-36461348 | Msa0679020:CDS | 40.0% | |
GCAAAGGATCATATTGGATG+AGG | + | chr4_4:36461335-36461354 | Msa0679020:CDS | 40.0% | |
AACACTTCCTAAAAGCTGCT+AGG | + | chr4_4:36461904-36461923 | Msa0679020:intron | 40.0% | |
CTTGCACAGGTTATAGGAAT+AGG | - | chr4_4:36462026-36462045 | None:intergenic | 40.0% | |
CTATTCCTATAACCTGTGCA+AGG | + | chr4_4:36462024-36462043 | Msa0679020:CDS | 40.0% | |
ATTGCAGGACACTTGATCAT+AGG | + | chr4_4:36462053-36462072 | Msa0679020:CDS | 40.0% | |
AGGACACTTGATCATAGGTA+TGG | + | chr4_4:36462058-36462077 | Msa0679020:intron | 40.0% | |
!! | GCAGGCAGTGATTTTAATCA+AGG | + | chr4_4:36462124-36462143 | Msa0679020:intron | 40.0% |
TTGATGTATCTAATGCCGTC+TGG | + | chr4_4:36462268-36462287 | Msa0679020:intron | 40.0% | |
TGATGTATCTAATGCCGTCT+GGG | + | chr4_4:36462269-36462288 | Msa0679020:intron | 40.0% | |
! | CTGTTAGGCATTTTTGTTGG+TGG | + | chr4_4:36462566-36462585 | Msa0679020:CDS | 40.0% |
!! | GCATTTTTGTTGGTGGAACA+AGG | + | chr4_4:36462573-36462592 | Msa0679020:CDS | 40.0% |
! | AAGGTAAGTGCCTTGTTAGT+TGG | + | chr4_4:36462592-36462611 | Msa0679020:intron | 40.0% |
! | AGGTAAGTGCCTTGTTAGTT+GGG | + | chr4_4:36462593-36462612 | Msa0679020:intron | 40.0% |
TATGGAGAACCCAACTAACA+AGG | - | chr4_4:36462605-36462624 | None:intergenic | 40.0% | |
CCATATCCGGATGATTGAAT+TGG | - | chr4_4:36462732-36462751 | None:intergenic | 40.0% | |
CCAATTCAATCATCCGGATA+TGG | + | chr4_4:36462729-36462748 | Msa0679020:CDS | 40.0% | |
TTTCCCATCATCACCATATC+CGG | - | chr4_4:36462745-36462764 | None:intergenic | 40.0% | |
TAAGGCGAACTAAAATAGGC+AGG | + | chr4_4:36462811-36462830 | Msa0679020:CDS | 40.0% | |
AAGGCGAACTAAAATAGGCA+GGG | + | chr4_4:36462812-36462831 | Msa0679020:CDS | 40.0% | |
AAACAAGAACTCACGATCCT+AGG | - | chr4_4:36462858-36462877 | None:intergenic | 40.0% | |
TCTACTTGCAGGTTTCATTG+AGG | + | chr4_4:36462939-36462958 | Msa0679020:intron | 40.0% | |
ATTTAGTGGGGTTGGATTTG+TGG | + | chr4_4:36463134-36463153 | Msa0679020:intron | 40.0% | |
ATCACCAAACTGTTAGTGAG+GGG | + | chr4_4:36463162-36463181 | Msa0679020:intron | 40.0% | |
TATTCCCCTCACTAACAGTT+TGG | - | chr4_4:36463169-36463188 | None:intergenic | 40.0% | |
TGTTAGTGAGGGGAATATGA+GGG | + | chr4_4:36463172-36463191 | Msa0679020:intron | 40.0% | |
ACTTCCTCTTTCAATTGACG+GGG | + | chr4_4:36463334-36463353 | Msa0679020:intron | 40.0% | |
ACTACGTCAGGTGAATGATA+AGG | + | chr4_4:36463925-36463944 | Msa0679020:intron | 40.0% | |
CTACGTCAGGTGAATGATAA+GGG | + | chr4_4:36463926-36463945 | Msa0679020:intron | 40.0% | |
GTTTGTGTAAGCTGAAGTTC+AGG | - | chr4_4:36464168-36464187 | None:intergenic | 40.0% | |
TAAGCCAGAGATGTGTAAGA+CGG | - | chr4_4:36464307-36464326 | None:intergenic | 40.0% | |
TGGCTTAAATATACAGGCTG+TGG | + | chr4_4:36464320-36464339 | Msa0679020:intron | 40.0% | |
GGTGATGTTGAACAAGAATG+TGG | + | chr4_4:36464411-36464430 | Msa0679020:CDS | 40.0% | |
TGATACTGTTGAAGATCCAG+TGG | + | chr4_4:36464443-36464462 | Msa0679020:CDS | 40.0% | |
!! | TTGCGAGCATACTTTTTGCA+AGG | + | chr4_4:36464598-36464617 | Msa0679020:CDS | 40.0% |
!! | TGCGAGCATACTTTTTGCAA+GGG | + | chr4_4:36464599-36464618 | Msa0679020:CDS | 40.0% |
TGCCATGTGACTAAGAAGTA+AGG | + | chr4_4:36465016-36465035 | Msa0679020:intron | 40.0% | |
!!! | CTAAGAAGTAAGGTTTTGGG+GGG | + | chr4_4:36465026-36465045 | Msa0679020:intron | 40.0% |
!!! | TAAGAAGTAAGGTTTTGGGG+GGG | + | chr4_4:36465027-36465046 | Msa0679020:intron | 40.0% |
TAGCCAGTTCACATCATTCT+TGG | + | chr4_4:36465275-36465294 | Msa0679020:CDS | 40.0% | |
GATCCAAGAATGATGTGAAC+TGG | - | chr4_4:36465281-36465300 | None:intergenic | 40.0% | |
TTTCTCATGAGCTTGAAAGC+CGG | + | chr4_4:36465494-36465513 | Msa0679020:CDS | 40.0% | |
CGACTAGTAGAACATACTTC+CGG | - | chr4_4:36465634-36465653 | None:intergenic | 40.0% | |
!!! | GACACTCATTTTGAAACGGA+GGG | - | chr4_4:36465790-36465809 | None:intergenic | 40.0% |
!!! | CGAAACTCATTTTGAAACGG+AGG | + | chr4_4:36466053-36466072 | Msa0679020:intron | 40.0% |
!! | ATAGTTGATAAGGGGATAGC+GGG | + | chr4_4:36466085-36466104 | Msa0679020:intron | 40.0% |
CGAGACATGTAGGCATTAAA+TGG | + | chr4_4:36466380-36466399 | Msa0679020:intron | 40.0% | |
! | TAAGTTGGGTTTCTCTCACA+TGG | + | chr4_4:36466510-36466529 | Msa0679020:intron | 40.0% |
ACCTGAGATTGTGCAATGAA+CGG | - | chr4_4:36466549-36466568 | None:intergenic | 40.0% | |
! | ACAATCTCAGGTTTTCCTCA+TGG | + | chr4_4:36466557-36466576 | Msa0679020:intron | 40.0% |
AAGACAGAATTCACCGGATA+GGG | + | chr4_4:36466616-36466635 | Msa0679020:CDS | 40.0% | |
TTGAAAACACAATCGAGGAG+AGG | + | chr4_4:36466861-36466880 | Msa0679020:CDS | 40.0% | |
ACTTCAAGAGAAGAAGGAAC+TGG | + | chr4_4:36466892-36466911 | Msa0679020:CDS | 40.0% | |
GGCAACGTCATTGCTTATTA+TGG | - | chr4_4:36466974-36466993 | None:intergenic | 40.0% | |
CCTACAGTCCTATTAAAGGA+GGG | - | chr4_4:36467005-36467024 | None:intergenic | 40.0% | |
TCCTTTAATAGGACTGTAGG+CGG | + | chr4_4:36467005-36467024 | Msa0679020:intron | 40.0% | |
! | TTACTTAAGCTGGCCTGATA+GGG | + | chr4_4:36467081-36467100 | Msa0679020:exon | 40.0% |
CGTTAACTGCTCATAGATAC+TGG | - | chr4_4:36467194-36467213 | None:intergenic | 40.0% | |
! | CGCATTTATAGGCGTCGTTA+TGG | - | chr4_4:36458711-36458730 | None:intergenic | 45.0% |
! | ATTGTCGGTGTCCGACATAT+TGG | + | chr4_4:36459348-36459367 | Msa0679020:intron | 45.0% |
CACAGGACACACCAATATGT+CGG | - | chr4_4:36459362-36459381 | None:intergenic | 45.0% | |
GTGTCCTGTGTCTGTGTAAT+CGG | + | chr4_4:36459372-36459391 | Msa0679020:intron | 45.0% | |
! | CTGTGTAATCGGTGCTTTGT+AGG | + | chr4_4:36459383-36459402 | Msa0679020:intron | 45.0% |
GGTGCTTTGTAGGTTCGATT+TGG | + | chr4_4:36459393-36459412 | Msa0679020:intron | 45.0% | |
CTTCTAATCGAAGCTGTGTC+CGG | + | chr4_4:36459478-36459497 | Msa0679020:intron | 45.0% | |
TTGCATACTGACACAGACAC+CGG | - | chr4_4:36459500-36459519 | None:intergenic | 45.0% | |
GGTGTCAGTGTCTTTGTAGT+CGG | + | chr4_4:36459579-36459598 | Msa0679020:intron | 45.0% | |
GGATGAATTAGCGGCTGATA+AGG | + | chr4_4:36459737-36459756 | Msa0679020:intron | 45.0% | |
AATGCAGCTGAAGACATTGG+TGG | + | chr4_4:36460190-36460209 | Msa0679020:CDS | 45.0% | |
! | TTAGCGGGCCTTCATCTAAA+CGG | + | chr4_4:36460299-36460318 | Msa0679020:CDS | 45.0% |
AAAACACGGTCCAGAAAGAG+AGG | + | chr4_4:36460325-36460344 | Msa0679020:CDS | 45.0% | |
TACCTTTACCTAAGCTGCCA+AGG | + | chr4_4:36460488-36460507 | Msa0679020:CDS | 45.0% | |
TTCCTTGGCAGCTTAGGTAA+AGG | - | chr4_4:36460493-36460512 | None:intergenic | 45.0% | |
CAAGCATGCCATAACAACAC+TGG | - | chr4_4:36460553-36460572 | None:intergenic | 45.0% | |
! | CAGTGTTGTTATGGCATGCT+TGG | + | chr4_4:36460551-36460570 | Msa0679020:CDS | 45.0% |
CATCACTTCACTCTGATCGA+GGG | - | chr4_4:36460626-36460645 | None:intergenic | 45.0% | |
TCATCACTTCACTCTGATCG+AGG | - | chr4_4:36460627-36460646 | None:intergenic | 45.0% | |
AATCAGATCTGACGATGCCT+CGG | - | chr4_4:36460659-36460678 | None:intergenic | 45.0% | |
ATCTGATTGTTCCGTTGCTG+AGG | + | chr4_4:36460671-36460690 | Msa0679020:CDS | 45.0% | |
ACCAAAGGGAATGGTTAGCA+TGG | + | chr4_4:36460695-36460714 | Msa0679020:CDS | 45.0% | |
CCAAAGGGAATGGTTAGCAT+GGG | + | chr4_4:36460696-36460715 | Msa0679020:CDS | 45.0% | |
!! | CAGGAGCATTCTGTAACTAG+AGG | + | chr4_4:36460727-36460746 | Msa0679020:CDS | 45.0% |
GAGCATTCTGTAACTAGAGG+TGG | + | chr4_4:36460730-36460749 | Msa0679020:CDS | 45.0% | |
CCATACCCATTTCATCAGCA+AGG | - | chr4_4:36460759-36460778 | None:intergenic | 45.0% | |
CCTTGCTGATGAAATGGGTA+TGG | + | chr4_4:36460756-36460775 | Msa0679020:CDS | 45.0% | |
TTGCCCTTGTCCTTGCTAAA+CGG | + | chr4_4:36460797-36460816 | Msa0679020:CDS | 45.0% | |
TTCCCGTTTAGCAAGGACAA+GGG | - | chr4_4:36460803-36460822 | None:intergenic | 45.0% | |
ATTCCCGTTTAGCAAGGACA+AGG | - | chr4_4:36460804-36460823 | None:intergenic | 45.0% | |
GTTGCAATTCCCGTTTAGCA+AGG | - | chr4_4:36460810-36460829 | None:intergenic | 45.0% | |
TTGAACACTCAGATTCTCCC+GGG | + | chr4_4:36460848-36460867 | Msa0679020:CDS | 45.0% | |
AGGAAGGACTTTAGATGACC+CGG | - | chr4_4:36460869-36460888 | None:intergenic | 45.0% | |
GAGTTCCTTTGATCACAGGA+AGG | - | chr4_4:36460885-36460904 | None:intergenic | 45.0% | |
TCAGCACTCTTCCATCTCTT+TGG | - | chr4_4:36461003-36461022 | None:intergenic | 45.0% | |
AAAGCATGTGATGCCTCCTA+AGG | + | chr4_4:36461083-36461102 | Msa0679020:CDS | 45.0% | |
GGTCAGAGTTCAAAGTTGGA+TGG | + | chr4_4:36461231-36461250 | Msa0679020:CDS | 45.0% | |
TTGGATGGAGAGTTGGAACA+GGG | + | chr4_4:36461246-36461265 | Msa0679020:CDS | 45.0% | |
ACAGGGCTCTATCAAGAAGA+AGG | + | chr4_4:36461263-36461282 | Msa0679020:CDS | 45.0% | |
CATTTCTCCATGCTGTGAAG+TGG | + | chr4_4:36461313-36461332 | Msa0679020:CDS | 45.0% | |
! | TCTCCAACACGATTCTGAAG+GGG | - | chr4_4:36461809-36461828 | None:intergenic | 45.0% |
CTCTCCAACACGATTCTGAA+GGG | - | chr4_4:36461810-36461829 | None:intergenic | 45.0% | |
TCCTAAAAGCTGCTAGGTGA+AGG | + | chr4_4:36461910-36461929 | Msa0679020:intron | 45.0% | |
! | TCCTTCACCTAGCAGCTTTT+AGG | - | chr4_4:36461914-36461933 | None:intergenic | 45.0% |
AAGCTGCTAGGTGAAGGATA+AGG | + | chr4_4:36461916-36461935 | Msa0679020:intron | 45.0% | |
ACAGTCCTTGCACAGGTTAT+AGG | - | chr4_4:36462032-36462051 | None:intergenic | 45.0% | |
GCCACACCAATTCAATCATC+CGG | + | chr4_4:36462723-36462742 | Msa0679020:CDS | 45.0% | |
TCCGGATGATTGAATTGGTG+TGG | - | chr4_4:36462727-36462746 | None:intergenic | 45.0% | |
! | TCATCCGGATATGGTGATGA+TGG | + | chr4_4:36462738-36462757 | Msa0679020:CDS | 45.0% |
! | CATCCGGATATGGTGATGAT+GGG | + | chr4_4:36462739-36462758 | Msa0679020:CDS | 45.0% |
ACTTGCAGGTTTCATTGAGG+AGG | + | chr4_4:36462942-36462961 | Msa0679020:intron | 45.0% | |
CTTGCAGGTTTCATTGAGGA+GGG | + | chr4_4:36462943-36462962 | Msa0679020:intron | 45.0% | |
CTGTTAGTGAGGGGAATATG+AGG | + | chr4_4:36463171-36463190 | Msa0679020:intron | 45.0% | |
!! | GGTTAGGAGAGTATTCTCTC+TGG | + | chr4_4:36463240-36463259 | Msa0679020:intron | 45.0% |
TAGACCCCGTCAATTGAAAG+AGG | - | chr4_4:36463341-36463360 | None:intergenic | 45.0% | |
! | CATGCAAGGCTTTGTCTTGT+TGG | - | chr4_4:36463795-36463814 | None:intergenic | 45.0% |
! | TCTCTTTTGCAGGTATGTCG+AGG | + | chr4_4:36463853-36463872 | Msa0679020:intron | 45.0% |
AGCACTAAAAGGTGGGAACT+TGG | + | chr4_4:36464380-36464399 | Msa0679020:CDS | 45.0% | |
!!! | AAGAAGTAAGGTTTTGGGGG+GGG | + | chr4_4:36465028-36465047 | Msa0679020:intron | 45.0% |
! | TGAAAGGGATGGTTCTGCAA+AGG | + | chr4_4:36465242-36465261 | Msa0679020:CDS | 45.0% |
ATGGTGAGCTAATTGCAGTC+AGG | + | chr4_4:36465380-36465399 | Msa0679020:intron | 45.0% | |
CAAATTCAGAGCAACACCTC+CGG | - | chr4_4:36465516-36465535 | None:intergenic | 45.0% | |
!!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_4:36465791-36465810 | None:intergenic | 45.0% |
! | ATAGCGGGAAAACTAGCTGA+TGG | + | chr4_4:36466100-36466119 | Msa0679020:intron | 45.0% |
AGTCCGTTTGGGTCAAACAT+TGG | - | chr4_4:36466285-36466304 | None:intergenic | 45.0% | |
TGAGATTGTGCAATGAACGG+AGG | - | chr4_4:36466546-36466565 | None:intergenic | 45.0% | |
TCCGTTCATTGCACAATCTC+AGG | + | chr4_4:36466545-36466564 | Msa0679020:intron | 45.0% | |
! | AGGTTTTCCTCATGGATCCT+TGG | + | chr4_4:36466565-36466584 | Msa0679020:intron | 45.0% |
! | TTTTCCTCATGGATCCTTGG+TGG | + | chr4_4:36466568-36466587 | Msa0679020:CDS | 45.0% |
AGGCTCAAGACAGAATTCAC+CGG | + | chr4_4:36466610-36466629 | Msa0679020:CDS | 45.0% | |
CAAGACAGAATTCACCGGAT+AGG | + | chr4_4:36466615-36466634 | Msa0679020:CDS | 45.0% | |
!! | TTGGTTTGTACTGCCCTATC+CGG | - | chr4_4:36466632-36466651 | None:intergenic | 45.0% |
TAGGGCAGTACAAACCAATC+AGG | + | chr4_4:36466634-36466653 | Msa0679020:CDS | 45.0% | |
TGCAAGAAGCAGTACCTGAT+TGG | - | chr4_4:36466651-36466670 | None:intergenic | 45.0% | |
CCCTCCTTTAATAGGACTGT+AGG | + | chr4_4:36467002-36467021 | Msa0679020:intron | 45.0% | |
GCCTACAGTCCTATTAAAGG+AGG | - | chr4_4:36467006-36467025 | None:intergenic | 45.0% | |
ACCGCCTACAGTCCTATTAA+AGG | - | chr4_4:36467009-36467028 | None:intergenic | 45.0% | |
! | GTTACTTAAGCTGGCCTGAT+AGG | + | chr4_4:36467080-36467099 | Msa0679020:exon | 45.0% |
!!! | TGATTTTAATTTTTTTTTTT+TGG | + | chr4_4:36467355-36467374 | Msa0679020:three_prime_UTR | 5.0% |
GCGGGAAGAGACGCATTTAT+AGG | - | chr4_4:36458722-36458741 | None:intergenic | 50.0% | |
GGGATGGGATGAGACGAAAA+TGG | - | chr4_4:36458775-36458794 | None:intergenic | 50.0% | |
TTCGTCGTTCGCTTCGTCAA+TGG | + | chr4_4:36458848-36458867 | Msa0679020:exon | 50.0% | |
!! | AGCACCGATTACACAGACAC+AGG | - | chr4_4:36459379-36459398 | None:intergenic | 50.0% |
! | TTCCGTTGCTGAGGTACCAA+AGG | + | chr4_4:36460680-36460699 | Msa0679020:CDS | 50.0% |
! | TCCGTTGCTGAGGTACCAAA+GGG | + | chr4_4:36460681-36460700 | Msa0679020:CDS | 50.0% |
TCCCTTTGGTACCTCAGCAA+CGG | - | chr4_4:36460685-36460704 | None:intergenic | 50.0% | |
! | TGCTGAGGTACCAAAGGGAA+TGG | + | chr4_4:36460686-36460705 | Msa0679020:CDS | 50.0% |
CCCATGCTAACCATTCCCTT+TGG | - | chr4_4:36460699-36460718 | None:intergenic | 50.0% | |
!! | GTTAGCATGGGCTTTGAAGC+AGG | + | chr4_4:36460708-36460727 | Msa0679020:CDS | 50.0% |
TGCCCTTGTCCTTGCTAAAC+GGG | + | chr4_4:36460798-36460817 | Msa0679020:CDS | 50.0% | |
GGAAGGACTTTAGATGACCC+GGG | - | chr4_4:36460868-36460887 | None:intergenic | 50.0% | |
AACTCTTGTCATCTGTCCCG+TGG | + | chr4_4:36460900-36460919 | Msa0679020:CDS | 50.0% | |
CATTGAGTGACAGCAACCAC+GGG | - | chr4_4:36460919-36460938 | None:intergenic | 50.0% | |
CCATTGAGTGACAGCAACCA+CGG | - | chr4_4:36460920-36460939 | None:intergenic | 50.0% | |
CGTGGTTGCTGTCACTCAAT+GGG | + | chr4_4:36460918-36460937 | Msa0679020:CDS | 50.0% | |
! | GAAAGGAAGCACGAAGGTTC+TGG | + | chr4_4:36460966-36460985 | Msa0679020:CDS | 50.0% |
CAGGCCCACAATAGTACTTC+TGG | - | chr4_4:36461161-36461180 | None:intergenic | 50.0% | |
GTTGGATGGAGAGTTGGAAC+AGG | + | chr4_4:36461245-36461264 | Msa0679020:CDS | 50.0% | |
TCCATGCTGTGAAGTGGCAA+AGG | + | chr4_4:36461319-36461338 | Msa0679020:CDS | 50.0% | |
! | TCCTTTGCCACTTCACAGCA+TGG | - | chr4_4:36461323-36461342 | None:intergenic | 50.0% |
ACACCCCTTCAGAATCGTGT+TGG | + | chr4_4:36461803-36461822 | Msa0679020:CDS | 50.0% | |
GCTCTCCAACACGATTCTGA+AGG | - | chr4_4:36461811-36461830 | None:intergenic | 50.0% | |
TGCAATCACAGTCCTTGCAC+AGG | - | chr4_4:36462039-36462058 | None:intergenic | 50.0% | |
TGTGCAAGGACTGTGATTGC+AGG | + | chr4_4:36462038-36462057 | Msa0679020:CDS | 50.0% | |
ACTGCTCCCACAGTTCTGTT+AGG | + | chr4_4:36462551-36462570 | Msa0679020:CDS | 50.0% | |
CAAGAACTCACGATCCTAGG+CGG | - | chr4_4:36462855-36462874 | None:intergenic | 50.0% | |
TTCATTGAGGAGGGATAGCC+TGG | + | chr4_4:36462952-36462971 | Msa0679020:CDS | 50.0% | |
AGGGGAATATGAGGGTAGCA+AGG | + | chr4_4:36463180-36463199 | Msa0679020:intron | 50.0% | |
GGGGAATATGAGGGTAGCAA+GGG | + | chr4_4:36463181-36463200 | Msa0679020:intron | 50.0% | |
GGGAATATGAGGGTAGCAAG+GGG | + | chr4_4:36463182-36463201 | Msa0679020:intron | 50.0% | |
AATATGAGGGTAGCAAGGGG+AGG | + | chr4_4:36463185-36463204 | Msa0679020:intron | 50.0% | |
ATATGAGGGTAGCAAGGGGA+GGG | + | chr4_4:36463186-36463205 | Msa0679020:intron | 50.0% | |
CTCTGGTAGTAGCTTTCCTC+TGG | + | chr4_4:36463257-36463276 | Msa0679020:intron | 50.0% | |
CCAGAGATGTGTAAGACGGA+GGG | - | chr4_4:36464303-36464322 | None:intergenic | 50.0% | |
!! | CCTTTTAGTGCTGCTGCAGT+TGG | - | chr4_4:36464372-36464391 | None:intergenic | 50.0% |
CCAACTGCAGCAGCACTAAA+AGG | + | chr4_4:36464369-36464388 | Msa0679020:CDS | 50.0% | |
ACTGCAGCAGCACTAAAAGG+TGG | + | chr4_4:36464372-36464391 | Msa0679020:CDS | 50.0% | |
CTGCAGCAGCACTAAAAGGT+GGG | + | chr4_4:36464373-36464392 | Msa0679020:CDS | 50.0% | |
GGTGGGAACTTGGCTAGTAA+TGG | + | chr4_4:36464390-36464409 | Msa0679020:CDS | 50.0% | |
ATCAACCACGGCATCCTTGT+TGG | - | chr4_4:36464705-36464724 | None:intergenic | 50.0% | |
CATCAACTACTCCCTGCAGA+AGG | + | chr4_4:36465302-36465321 | Msa0679020:CDS | 50.0% | |
CACCATTGAGCGAGACATGT+AGG | + | chr4_4:36466370-36466389 | Msa0679020:intron | 50.0% | |
TGCCTACATGTCTCGCTCAA+TGG | - | chr4_4:36466375-36466394 | None:intergenic | 50.0% | |
!! | AGAGGCTCTAGGGAAGTTGA+CGG | + | chr4_4:36467034-36467053 | Msa0679020:CDS | 50.0% |
TGATAAGGGGAAGCAGCCGA+TGG | + | chr4_4:36459752-36459771 | Msa0679020:CDS | 55.0% | |
GGAGCCTCTTCAGCAACCAT+TGG | - | chr4_4:36460460-36460479 | None:intergenic | 55.0% | |
AGTGATGAATGAGACGGCCG+AGG | + | chr4_4:36460639-36460658 | Msa0679020:CDS | 55.0% | |
CCGTGGTTGCTGTCACTCAA+TGG | + | chr4_4:36460917-36460936 | Msa0679020:CDS | 55.0% | |
CTGATCTTGCACTTCCGCCT+AGG | + | chr4_4:36462838-36462857 | Msa0679020:CDS | 55.0% | |
GGGGAGGGAGGAAATCATTC+AGG | + | chr4_4:36463201-36463220 | Msa0679020:intron | 55.0% | |
GCAAGAAGGAAAGGAGCCTC+AGG | + | chr4_4:36463585-36463604 | Msa0679020:intron | 55.0% | |
TCACCTGACGTAGTCGTGTG+AGG | - | chr4_4:36463919-36463938 | None:intergenic | 55.0% | |
CCCTCCGTCTTACACATCTC+TGG | + | chr4_4:36464300-36464319 | Msa0679020:intron | 55.0% | |
GCCAGAGATGTGTAAGACGG+AGG | - | chr4_4:36464304-36464323 | None:intergenic | 55.0% | |
GACTTCCAACAAGGATGCCG+TGG | + | chr4_4:36464697-36464716 | Msa0679020:CDS | 55.0% | |
!!! | AAGTAAGGTTTTGGGGGGGG+TGG | + | chr4_4:36465031-36465050 | Msa0679020:intron | 55.0% |
!!! | AGTAAGGTTTTGGGGGGGGT+GGG | + | chr4_4:36465032-36465051 | Msa0679020:intron | 55.0% |
CTCATGAGCTTGAAAGCCGG+AGG | + | chr4_4:36465497-36465516 | Msa0679020:CDS | 55.0% | |
GGTTCCACCAAGGATCCATG+AGG | - | chr4_4:36466575-36466594 | None:intergenic | 55.0% | |
GACTGTAGGCGGTTCTTCAG+AGG | + | chr4_4:36467016-36467035 | Msa0679020:CDS | 55.0% | |
GCGGTTCTTCAGAGGCTCTA+GGG | + | chr4_4:36467024-36467043 | Msa0679020:CDS | 55.0% | |
! | AGCTGGCCTGATAGGGTAAC+TGG | + | chr4_4:36467088-36467107 | Msa0679020:exon | 55.0% |
TAAGGGGAAGCAGCCGATGG+AGG | + | chr4_4:36459755-36459774 | Msa0679020:CDS | 60.0% | |
GCGCTCTCTCTACACCACTC+AGG | - | chr4_4:36460378-36460397 | None:intergenic | 60.0% | |
! | GAGTGGTGTAGAGAGAGCGC+TGG | + | chr4_4:36460378-36460397 | Msa0679020:CDS | 60.0% |
GCGCTCTCTCTACACCACTC+AGG | - | chr4_4:36460378-36460397 | None:intergenic | 60.0% | |
!! | TGGTGTAGAGAGAGCGCTGC+TGG | + | chr4_4:36460414-36460433 | Msa0679020:CDS | 60.0% |
CCACATGAGCAGCTCCCAGA+CGG | - | chr4_4:36462286-36462305 | None:intergenic | 60.0% | |
! | GAGGAGCTGCACAAGAGCAC+AGG | - | chr4_4:36462517-36462536 | None:intergenic | 60.0% |
CCTGACGTAGTCGTGTGAGG+AGG | - | chr4_4:36463916-36463935 | None:intergenic | 60.0% | |
CCTCCTCACACGACTACGTC+AGG | + | chr4_4:36463913-36463932 | Msa0679020:CDS | 60.0% | |
!!! | GTAAGGTTTTGGGGGGGGTG+GGG | + | chr4_4:36465033-36465052 | Msa0679020:intron | 60.0% |
!!! | TAAGGTTTTGGGGGGGGTGG+GGG | + | chr4_4:36465034-36465053 | Msa0679020:intron | 60.0% |
TCCTTGGTGGAACCCTGCTG+TGG | + | chr4_4:36466581-36466600 | Msa0679020:CDS | 60.0% | |
TCCACAGCAGGGTTCCACCA+AGG | - | chr4_4:36466585-36466604 | None:intergenic | 60.0% | |
GGCGGTTCTTCAGAGGCTCT+AGG | + | chr4_4:36467023-36467042 | Msa0679020:CDS | 60.0% | |
!! | GGCTCTAGGGAAGTTGACGG+TGG | + | chr4_4:36467037-36467056 | Msa0679020:CDS | 60.0% |
GCGCTGGAGTTCGACCTGAG+TGG | + | chr4_4:36460394-36460413 | Msa0679020:CDS | 65.0% | |
CCGTCTGGGAGCTGCTCATG+TGG | + | chr4_4:36462283-36462302 | Msa0679020:intron | 65.0% | |
TGAGGGTAGCAAGGGGAGGG+AGG | + | chr4_4:36463189-36463208 | Msa0679020:intron | 65.0% | |
!!! | AAGGTTTTGGGGGGGGTGGG+GGG | + | chr4_4:36465035-36465054 | Msa0679020:intron | 65.0% |
GGGGTGGGGGGTTTGAAGGA+GGG | + | chr4_4:36465047-36465066 | Msa0679020:intron | 65.0% | |
! | GAACCCTGCTGTGGAGCGTC+AGG | + | chr4_4:36466590-36466609 | Msa0679020:CDS | 65.0% |
GAGCCTGACGCTCCACAGCA+GGG | - | chr4_4:36466596-36466615 | None:intergenic | 65.0% | |
TGAGCCTGACGCTCCACAGC+AGG | - | chr4_4:36466597-36466616 | None:intergenic | 65.0% | |
GGGGGTGGGGGGTTTGAAGG+AGG | + | chr4_4:36465046-36465065 | Msa0679020:intron | 70.0% | |
GGGGGGGGTGGGGGGTTTGA+AGG | + | chr4_4:36465043-36465062 | Msa0679020:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 36458703 | 36467484 | 36458703 | ID=Msa0679020;Name=Msa0679020 |
chr4_4 | mRNA | 36458703 | 36467484 | 36458703 | ID=Msa0679020-mRNA-1;Parent=Msa0679020;Name=Msa0679020-mRNA-1;_AED=0.05;_eAED=0.05;_QI=164|0.93|0.93|1|1|1|16|396|923 |
chr4_4 | exon | 36458703 | 36458915 | 36458703 | ID=Msa0679020-mRNA-1:exon:8547;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36459748 | 36459855 | 36459748 | ID=Msa0679020-mRNA-1:exon:8548;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36460164 | 36461356 | 36460164 | ID=Msa0679020-mRNA-1:exon:8549;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36461719 | 36461841 | 36461719 | ID=Msa0679020-mRNA-1:exon:8550;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36462001 | 36462074 | 36462001 | ID=Msa0679020-mRNA-1:exon:8551;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36462531 | 36462594 | 36462531 | ID=Msa0679020-mRNA-1:exon:8552;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36462717 | 36462863 | 36462717 | ID=Msa0679020-mRNA-1:exon:8553;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36462950 | 36463035 | 36462950 | ID=Msa0679020-mRNA-1:exon:8554;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36463865 | 36463934 | 36463865 | ID=Msa0679020-mRNA-1:exon:8555;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36464336 | 36464464 | 36464336 | ID=Msa0679020-mRNA-1:exon:8556;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36464590 | 36464817 | 36464590 | ID=Msa0679020-mRNA-1:exon:8557;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36465219 | 36465323 | 36465219 | ID=Msa0679020-mRNA-1:exon:8558;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36465398 | 36465550 | 36465398 | ID=Msa0679020-mRNA-1:exon:8559;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36466567 | 36466655 | 36466567 | ID=Msa0679020-mRNA-1:exon:8560;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36466844 | 36466924 | 36466844 | ID=Msa0679020-mRNA-1:exon:8561;Parent=Msa0679020-mRNA-1 |
chr4_4 | exon | 36467016 | 36467484 | 36467016 | ID=Msa0679020-mRNA-1:exon:8562;Parent=Msa0679020-mRNA-1 |
chr4_4 | five_prime_UTR | 36458703 | 36458866 | 36458703 | ID=Msa0679020-mRNA-1:five_prime_utr;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36458867 | 36458915 | 36458867 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36459748 | 36459855 | 36459748 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36460164 | 36461356 | 36460164 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36461719 | 36461841 | 36461719 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36462001 | 36462074 | 36462001 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36462531 | 36462594 | 36462531 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36462717 | 36462863 | 36462717 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36462950 | 36463035 | 36462950 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36463865 | 36463934 | 36463865 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36464336 | 36464464 | 36464336 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36464590 | 36464817 | 36464590 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36465219 | 36465323 | 36465219 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36465398 | 36465550 | 36465398 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36466567 | 36466655 | 36466567 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36466844 | 36466924 | 36466844 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | CDS | 36467016 | 36467088 | 36467016 | ID=Msa0679020-mRNA-1:cds;Parent=Msa0679020-mRNA-1 |
chr4_4 | three_prime_UTR | 36467089 | 36467484 | 36467089 | ID=Msa0679020-mRNA-1:three_prime_utr;Parent=Msa0679020-mRNA-1 |
Gene Sequence |
Protein sequence |