Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0051040 | XP_003589304.2 | 95.082 | 915 | 10 | 4 | 1 | 911 | 1 | 884 | 0.0 | 1771 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0051040 | sp|Q9SX85|SEC3A_ARATH | 80.870 | 920 | 134 | 7 | 1 | 911 | 1 | 887 | 0.0 | 1519 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0051040 | G7I5A3 | 95.082 | 915 | 10 | 4 | 1 | 911 | 1 | 884 | 0.0 | 1771 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0029240 | Msa0051040 | 0.825408 | 4.765133e-54 | -8.615850e-47 |
Msa0051040 | Msa0056450 | 0.819097 | 1.389093e-52 | -8.615850e-47 |
Msa0051040 | Msa0065680 | -0.816286 | 5.981865e-52 | -8.615850e-47 |
Msa0051040 | Msa0078640 | 0.826273 | 2.970495e-54 | -8.615850e-47 |
Msa0051040 | Msa0089980 | 0.812748 | 3.627287e-51 | -8.615850e-47 |
Msa0051040 | Msa0090010 | 0.811852 | 5.689500e-51 | -8.615850e-47 |
Msa0051040 | Msa0092410 | 0.806942 | 6.439049e-50 | -8.615850e-47 |
Msa0051040 | Msa0098290 | 0.809214 | 2.113835e-50 | -8.615850e-47 |
Msa0051040 | Msa0101250 | 0.932950 | 3.935473e-95 | -8.615850e-47 |
Msa0051040 | Msa0108410 | 0.821444 | 4.024110e-53 | -8.615850e-47 |
Msa0051040 | Msa0138020 | 0.825190 | 5.365828e-54 | -8.615850e-47 |
Msa0051040 | Msa0183760 | 0.819628 | 1.051001e-52 | -8.615850e-47 |
Msa0051040 | Msa0189040 | 0.812704 | 3.708770e-51 | -8.615850e-47 |
Msa0051040 | Msa0189610 | 0.800047 | 1.730681e-48 | -8.615850e-47 |
Msa0051040 | Msa0189710 | 0.821764 | 3.394212e-53 | -8.615850e-47 |
Msa0051040 | Msa0205010 | 0.804681 | 1.922301e-49 | -8.615850e-47 |
Msa0051040 | Msa0217700 | 0.816205 | 6.234489e-52 | -8.615850e-47 |
Msa0051040 | Msa0218370 | 0.803000 | 4.296159e-49 | -8.615850e-47 |
Msa0051040 | Msa0225220 | 0.820162 | 7.934108e-53 | -8.615850e-47 |
Msa0051040 | Msa0227340 | 0.802178 | 6.344978e-49 | -8.615850e-47 |
Msa0051040 | Msa0231060 | 0.807547 | 4.792361e-50 | -8.615850e-47 |
Msa0051040 | Msa0232020 | 0.837533 | 4.915705e-57 | -8.615850e-47 |
Msa0051040 | Msa0232090 | 0.814429 | 1.547621e-51 | -8.615850e-47 |
Msa0051040 | Msa0241140 | 0.825501 | 4.529235e-54 | -8.615850e-47 |
Msa0051040 | Msa0264830 | 0.822177 | 2.723014e-53 | -8.615850e-47 |
Msa0051040 | Msa0267370 | 0.810345 | 1.207373e-50 | -8.615850e-47 |
Msa0051040 | Msa0267790 | 0.813714 | 2.226124e-51 | -8.615850e-47 |
Msa0051040 | Msa0269560 | 0.800690 | 1.280618e-48 | -8.615850e-47 |
Msa0051040 | Msa0287870 | 0.827458 | 1.547110e-54 | -8.615850e-47 |
Msa0051040 | Msa0296820 | 0.803001 | 4.293584e-49 | -8.615850e-47 |
Msa0051040 | Msa0302870 | 0.813072 | 3.079398e-51 | -8.615850e-47 |
Msa0051040 | Msa0304100 | 0.801229 | 9.937627e-49 | -8.615850e-47 |
Msa0051040 | Msa0308460 | 0.820778 | 5.730207e-53 | -8.615850e-47 |
Msa0051040 | Msa0310090 | 0.817131 | 3.866835e-52 | -8.615850e-47 |
Msa0051040 | Msa0310440 | 0.813594 | 2.365074e-51 | -8.615850e-47 |
Msa0051040 | Msa0317970 | 0.815108 | 1.094572e-51 | -8.615850e-47 |
Msa0051040 | Msa0340340 | 0.820480 | 6.710181e-53 | -8.615850e-47 |
Msa0051040 | Msa0342010 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
Msa0051040 | Msa0379610 | 0.809008 | 2.339088e-50 | -8.615850e-47 |
Msa0051040 | Msa0382370 | 0.806489 | 8.022740e-50 | -8.615850e-47 |
Msa0051040 | Msa0393430 | 0.815348 | 9.678163e-52 | -8.615850e-47 |
Msa0051040 | Msa0393620 | 0.806735 | 7.120004e-50 | -8.615850e-47 |
Msa0051040 | Msa0398200 | 0.801880 | 7.307872e-49 | -8.615850e-47 |
Msa0051040 | Msa0403640 | 0.833355 | 5.594606e-56 | -8.615850e-47 |
Msa0051040 | Msa0432160 | 0.827405 | 1.592966e-54 | -8.615850e-47 |
Msa0051040 | Msa0432670 | 0.806648 | 7.429533e-50 | -8.615850e-47 |
Msa0051040 | Msa0476680 | 0.840074 | 1.082214e-57 | -8.615850e-47 |
Msa0051040 | Msa0518380 | 0.807265 | 5.499200e-50 | -8.615850e-47 |
Msa0051040 | Msa0521010 | 0.841842 | 3.717076e-58 | -8.615850e-47 |
Msa0051040 | Msa0607320 | 0.814007 | 1.917975e-51 | -8.615850e-47 |
Msa0051040 | Msa0614920 | 0.827161 | 1.822564e-54 | -8.615850e-47 |
Msa0051040 | Msa0623070 | 0.809210 | 2.117780e-50 | -8.615850e-47 |
Msa0051040 | Msa0642730 | 0.804306 | 2.301852e-49 | -8.615850e-47 |
Msa0051040 | Msa0661320 | 0.828684 | 7.841998e-55 | -8.615850e-47 |
Msa0051040 | Msa0696850 | 0.809481 | 1.852662e-50 | -8.615850e-47 |
Msa0051040 | Msa0707250 | 0.813040 | 3.129745e-51 | -8.615850e-47 |
Msa0051040 | Msa0711150 | 0.832539 | 8.924669e-56 | -8.615850e-47 |
Msa0051040 | Msa0713510 | 0.815782 | 7.750449e-52 | -8.615850e-47 |
Msa0051040 | Msa0733010 | 0.819578 | 1.079199e-52 | -8.615850e-47 |
Msa0051040 | Msa0743930 | 0.817988 | 2.477977e-52 | -8.615850e-47 |
Msa0051040 | Msa0749440 | 0.806345 | 8.607195e-50 | -8.615850e-47 |
Msa0051040 | Msa0763890 | 0.801996 | 6.918055e-49 | -8.615850e-47 |
Msa0051040 | Msa0763920 | 0.822981 | 1.770967e-53 | -8.615850e-47 |
Msa0051040 | Msa0784480 | 0.815616 | 8.437655e-52 | -8.615850e-47 |
Msa0051040 | Msa0797770 | 0.814643 | 1.387679e-51 | -8.615850e-47 |
Msa0051040 | Msa0814600 | 0.809358 | 1.968368e-50 | -8.615850e-47 |
Msa0051040 | Msa0816130 | 0.805409 | 1.353786e-49 | -8.615850e-47 |
Msa0051040 | Msa0817460 | 0.817285 | 3.569922e-52 | -8.615850e-47 |
Msa0051040 | Msa0822500 | 0.817773 | 2.771288e-52 | -8.615850e-47 |
Msa0051040 | Msa0828240 | 0.811183 | 7.950478e-51 | -8.615850e-47 |
Msa0051040 | Msa0830230 | 0.833463 | 5.256604e-56 | -8.615850e-47 |
Msa0051040 | Msa0831850 | 0.804724 | 1.883137e-49 | -8.615850e-47 |
Msa0051040 | Msa0835230 | 0.809129 | 2.203704e-50 | -8.615850e-47 |
Msa0051040 | Msa0844110 | 0.819224 | 1.299502e-52 | -8.615850e-47 |
Msa0051040 | Msa0867010 | 0.802396 | 5.722331e-49 | -8.615850e-47 |
Msa0051040 | Msa0868160 | 0.821346 | 4.239780e-53 | -8.615850e-47 |
Msa0051040 | Msa0894710 | 0.811142 | 8.117268e-51 | -8.615850e-47 |
Msa0051040 | Msa0899970 | 0.841391 | 4.890410e-58 | -8.615850e-47 |
Msa0051040 | Msa0965080 | 0.851225 | 1.019170e-60 | -8.615850e-47 |
Msa0051040 | Msa0965290 | 0.841722 | 4.000524e-58 | -8.615850e-47 |
Msa0051040 | Msa0999680 | 0.844943 | 5.527301e-59 | -8.615850e-47 |
Msa0051040 | Msa1030810 | 0.807432 | 5.070404e-50 | -8.615850e-47 |
Msa0051040 | Msa1034500 | 0.825813 | 3.819159e-54 | -8.615850e-47 |
Msa0051040 | Msa1048220 | 0.809765 | 1.609308e-50 | -8.615850e-47 |
Msa0051040 | Msa1069890 | 0.801779 | 7.666387e-49 | -8.615850e-47 |
Msa0051040 | Msa1089450 | 0.801056 | 1.077888e-48 | -8.615850e-47 |
Msa0051040 | Msa1111380 | 0.805602 | 1.233488e-49 | -8.615850e-47 |
Msa0051040 | Msa1114780 | 0.806337 | 8.638817e-50 | -8.615850e-47 |
Msa0051040 | Msa1143850 | 0.836354 | 9.831221e-57 | -8.615850e-47 |
Msa0051040 | Msa1162780 | 0.812000 | 5.284166e-51 | -8.615850e-47 |
Msa0051040 | Msa1163090 | 0.806632 | 7.486688e-50 | -8.615850e-47 |
Msa0051040 | Msa1183890 | 0.800663 | 1.296626e-48 | -8.615850e-47 |
Msa0051040 | Msa1185110 | 0.810030 | 1.411709e-50 | -8.615850e-47 |
Msa0051040 | Msa1225130 | 0.822444 | 2.360859e-53 | -8.615850e-47 |
Msa0051040 | Msa1246360 | 0.808903 | 2.464268e-50 | -8.615850e-47 |
Msa0051040 | Msa1259860 | 0.809664 | 1.692148e-50 | -8.615850e-47 |
Msa0051040 | Msa1284900 | 0.816194 | 6.269837e-52 | -8.615850e-47 |
Msa0051040 | Msa1308870 | 0.809904 | 1.502572e-50 | -8.615850e-47 |
Msa0051040 | Msa1319560 | 0.813033 | 3.141040e-51 | -8.615850e-47 |
Msa0051040 | Msa1338400 | 0.817326 | 3.494994e-52 | -8.615850e-47 |
Msa0051040 | Msa1369690 | 0.803636 | 3.172209e-49 | -8.615850e-47 |
Msa0051040 | Msa1371940 | 0.801925 | 7.152816e-49 | -8.615850e-47 |
Msa0051040 | Msa1372280 | 0.814444 | 1.535757e-51 | -8.615850e-47 |
Msa0051040 | Msa1376000 | 0.815286 | 9.995236e-52 | -8.615850e-47 |
Msa0051040 | Msa1380220 | 0.840930 | 6.463315e-58 | -8.615850e-47 |
Msa0051040 | Msa1401460 | 0.815231 | 1.027611e-51 | -8.615850e-47 |
Msa0051040 | Msa1418850 | 0.824623 | 7.300852e-54 | -8.615850e-47 |
Msa0051040 | Msa1422430 | 0.811369 | 7.248058e-51 | -8.615850e-47 |
Msa0051040 | Msa1430550 | 0.812876 | 3.399777e-51 | -8.615850e-47 |
Msa0051040 | Msa1436650 | 0.803288 | 3.744642e-49 | -8.615850e-47 |
Msa0051040 | Msa1442920 | 0.819218 | 1.303800e-52 | -8.615850e-47 |
Msa0051040 | Msa1448560 | 0.814007 | 1.917975e-51 | -8.615850e-47 |
Msa0051040 | Msa1452710 | 0.812857 | 3.432328e-51 | -8.615850e-47 |
Msa0051040 | Msa1457160 | 0.805920 | 1.057483e-49 | -8.615850e-47 |
Msa0051040 | Msa1458340 | 0.800566 | 1.357031e-48 | -8.615850e-47 |
Msa0051040 | Msa1458680 | 0.828332 | 9.534147e-55 | -8.615850e-47 |
Msa0051040 | Msa1460370 | 0.810649 | 1.037563e-50 | -8.615850e-47 |
Msa0051040 | Msa1462360 | 0.842661 | 2.256309e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0051040 | MtrunA17_Chr1g0154401 | 95.082 | 915 | 10 | 4 | 1 | 911 | 1 | 884 | 0.0 | 1771 |
Msa0051040 | MtrunA17_Chr3g0141311 | 75.926 | 918 | 174 | 8 | 1 | 911 | 1 | 878 | 0.0 | 1412 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0051040 | AT1G47550.1 | 80.870 | 920 | 134 | 7 | 1 | 911 | 1 | 887 | 0.0 | 1519 |
Msa0051040 | AT1G47550.2 | 80.782 | 921 | 134 | 8 | 1 | 911 | 1 | 888 | 0.0 | 1514 |
Msa0051040 | AT1G47560.1 | 78.587 | 920 | 155 | 7 | 1 | 911 | 1 | 887 | 0.0 | 1470 |
Find 174 sgRNAs with CRISPR-Local
Find 890 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACCATCTCTAAAGATGTTT+TGG | 0.191387 | 1_2:+5080545 | Msa0051040:CDS |
TAAAGGCTCGCTTTCTAAAA+TGG | 0.192233 | 1_2:-5083249 | None:intergenic |
TGATGATGATTTGGGAATTA+TGG | 0.206606 | 1_2:+5087080 | Msa0051040:CDS |
AGAGGACATGGAGGCTCTTT+TGG | 0.215755 | 1_2:+5081559 | Msa0051040:CDS |
AGTAATACCTCATTTATTAA+AGG | 0.218040 | 1_2:-5083266 | None:intergenic |
TCCTAAGATGCCGTGACTTT+TGG | 0.251356 | 1_2:-5078190 | None:intergenic |
CGCATAAGTGAGGTCAATAT+TGG | 0.260424 | 1_2:-5085848 | None:intergenic |
ATAACAGAACGATATCTTTC+TGG | 0.263028 | 1_2:+5089001 | Msa0051040:CDS |
GAGAAATTACTTTGCTAGTT+TGG | 0.269162 | 1_2:+5086145 | Msa0051040:CDS |
GTTCATTTCTTTCAATTTGA+TGG | 0.269204 | 1_2:-5089217 | None:intergenic |
TGAATCACTTCAGGATTTAC+TGG | 0.296040 | 1_2:+5087813 | Msa0051040:CDS |
GAGCCACACTTTGGCTTCTA+AGG | 0.298652 | 1_2:-5080357 | None:intergenic |
AGTATATGATCATGCTAATA+TGG | 0.299003 | 1_2:-5091193 | None:intergenic |
AAGAACTGTTACCTTCCTTA+TGG | 0.301508 | 1_2:+5091945 | Msa0051040:CDS |
TGTTGTGGAGTTGGCTCTTT+GGG | 0.302230 | 1_2:+5080596 | Msa0051040:CDS |
CCATGTCCTCTTCCTCTGCC+TGG | 0.306661 | 1_2:-5081547 | None:intergenic |
TCAGGGACAGTCTAGGGATT+TGG | 0.331946 | 1_2:+5090414 | Msa0051040:CDS |
TTTCTTATACATCGCATTGA+TGG | 0.332287 | 1_2:-5091900 | None:intergenic |
AATCCAACTGTTTGGCTTGA+AGG | 0.341279 | 1_2:+5086785 | Msa0051040:CDS |
ACAGATGTGAATGTCTCATT+AGG | 0.344916 | 1_2:-5092829 | None:intergenic |
TAATACAAACTAACCTCTTC+AGG | 0.347914 | 1_2:-5091386 | None:intergenic |
TTCAGATACCTTTCCAGCTT+GGG | 0.348314 | 1_2:+5091734 | Msa0051040:intron |
CATTTGCTGCTTCCAGAGCC+TGG | 0.354262 | 1_2:-5083220 | None:intergenic |
TCCAAAAGTCACGGCATCTT+AGG | 0.364442 | 1_2:+5078189 | Msa0051040:CDS |
ACATTACTCTGAGTTGAAAC+AGG | 0.370628 | 1_2:-5081449 | None:intergenic |
CCTCAATCCTTCGAGCAAAC+TGG | 0.370769 | 1_2:-5091343 | None:intergenic |
ATGTTGTGGAGTTGGCTCTT+TGG | 0.371883 | 1_2:+5080595 | Msa0051040:CDS |
CATTTGCAAGCTGTTATTAC+GGG | 0.376820 | 1_2:-5085563 | None:intergenic |
GCATTTGCAAGCTGTTATTA+CGG | 0.384833 | 1_2:-5085564 | None:intergenic |
TCGTATGGAGCAGTACATTC+AGG | 0.402425 | 1_2:+5090396 | Msa0051040:CDS |
AACAAATGTTGTAGACGATA+TGG | 0.408324 | 1_2:+5084391 | Msa0051040:CDS |
CATCTAGAAATCCAACTGTT+TGG | 0.408587 | 1_2:+5086777 | Msa0051040:CDS |
AGAACTGTTACCTTCCTTAT+GGG | 0.409508 | 1_2:+5091946 | Msa0051040:CDS |
TAGCGTAATGTTTGCAACCT+TGG | 0.411602 | 1_2:+5090896 | Msa0051040:CDS |
AACAACAAACTCCGGCGAAA+TGG | 0.412068 | 1_2:+5078074 | Msa0051040:exon |
GAAGAGAGAGCTCCAGGCTC+TGG | 0.412581 | 1_2:+5083208 | Msa0051040:CDS |
TGAGACACTTAATATTTGTA+AGG | 0.419440 | 1_2:+5089941 | Msa0051040:CDS |
TGTGTGTCGCAGGTGTTGTA+TGG | 0.421271 | 1_2:+5084356 | Msa0051040:intron |
CCTCCAGGAGGTGTTGTTAA+CGG | 0.424284 | 1_2:+5087036 | Msa0051040:CDS |
TACCTTGCATTTGTCCCATA+AGG | 0.425552 | 1_2:-5091960 | None:intergenic |
CTCAATGCAATTAAGATGTA+TGG | 0.428539 | 1_2:-5089922 | None:intergenic |
ACGTCTTCTTCAGCATTTGA+AGG | 0.429611 | 1_2:+5086354 | Msa0051040:CDS |
GGCGAAATGGCGAAATCTAC+TGG | 0.433895 | 1_2:+5078087 | Msa0051040:exon |
CTCTAAACTTGCTTCTTCGC+CGG | 0.440685 | 1_2:+5086519 | Msa0051040:CDS |
AGCTTTAAATGAATCACTTC+AGG | 0.446554 | 1_2:+5087804 | Msa0051040:CDS |
TGAACGGAATGTTCGCCAAA+TGG | 0.447886 | 1_2:+5089235 | Msa0051040:CDS |
AGCTTGTTCATAGGCTTCAC+TGG | 0.449048 | 1_2:-5091162 | None:intergenic |
TTTCAGATACCTTTCCAGCT+TGG | 0.449546 | 1_2:+5091733 | Msa0051040:intron |
GGAGTTGGCTCTTTGGGCTA+AGG | 0.449911 | 1_2:+5080602 | Msa0051040:CDS |
AAGACTGAAGAGAGAGCTCC+AGG | 0.451275 | 1_2:+5083202 | Msa0051040:CDS |
CATGTCCTCTTCCTCTGCCT+GGG | 0.452338 | 1_2:-5081546 | None:intergenic |
GCGCGTGCAAGCTTGTTCAT+AGG | 0.452902 | 1_2:-5091171 | None:intergenic |
ACTATGCTGCCTTTCAGAAT+AGG | 0.453773 | 1_2:+5090970 | Msa0051040:CDS |
TCTAAACTTGCTTCTTCGCC+GGG | 0.459252 | 1_2:+5086520 | Msa0051040:CDS |
TAGTTTGCAACGTGTTTGAC+AGG | 0.460366 | 1_2:+5085742 | Msa0051040:intron |
AGCCTTGACAAGAATTGCTT+GGG | 0.460705 | 1_2:+5086470 | Msa0051040:CDS |
TACCGCAGGTCAGCATGATC+AGG | 0.461449 | 1_2:-5086313 | None:intergenic |
TGCGATCCTTGCAACTCGTA+TGG | 0.462885 | 1_2:+5090381 | Msa0051040:CDS |
CTTCCTCTGCCTGGGAGACA+AGG | 0.464656 | 1_2:-5081538 | None:intergenic |
GATAAGATGATCTTCTGCTT+AGG | 0.468986 | 1_2:-5078156 | None:intergenic |
TTGCCGTTAACAACACCTCC+TGG | 0.473791 | 1_2:-5087039 | None:intergenic |
TATCCCACTTCTGGTGGATG+AGG | 0.473804 | 1_2:+5086886 | Msa0051040:CDS |
TCAGTCATAGCGGAAGCAAC+AGG | 0.474576 | 1_2:-5081485 | None:intergenic |
GAGCCTTGACAAGAATTGCT+TGG | 0.477359 | 1_2:+5086469 | Msa0051040:intron |
ACATCTATACCAACGACCTT+AGG | 0.483257 | 1_2:-5080576 | None:intergenic |
AGATGGTCAAGATGCAAAGA+AGG | 0.483558 | 1_2:-5080530 | None:intergenic |
CAGATGTGAATGTCTCATTA+GGG | 0.490732 | 1_2:-5092828 | None:intergenic |
GAACGGAATGTTCGCCAAAT+GGG | 0.491396 | 1_2:+5089236 | Msa0051040:CDS |
TGCCAACATTGTGCCCACTT+TGG | 0.493261 | 1_2:+5091121 | Msa0051040:CDS |
TGTAGGATAGAACACCCATT+TGG | 0.494048 | 1_2:-5089250 | None:intergenic |
GCATAAGTGAGGTCAATATT+GGG | 0.495344 | 1_2:-5085847 | None:intergenic |
TGTCTCCCAGGCAGAGGAAG+AGG | 0.497242 | 1_2:+5081541 | Msa0051040:CDS |
CCAGGCAGAGGAAGAGGACA+TGG | 0.498118 | 1_2:+5081547 | Msa0051040:CDS |
GGTCGCCTTCCTAAGGTCGT+TGG | 0.498133 | 1_2:+5080567 | Msa0051040:CDS |
CCAGTTTGCTCGAAGGATTG+AGG | 0.499274 | 1_2:+5091343 | Msa0051040:CDS |
TCGGCTTACCCCAGATAAGC+TGG | 0.499604 | 1_2:-5091791 | None:intergenic |
AAATTACTTTGCTAGTTTGG+TGG | 0.505402 | 1_2:+5086148 | Msa0051040:CDS |
TGCTTGGCGACCTAGAGTCT+CGG | 0.508432 | 1_2:+5089059 | Msa0051040:CDS |
GTTGTTAACGGCAACAAAGC+TGG | 0.515692 | 1_2:+5087048 | Msa0051040:CDS |
TAACAGCTTGCAAATGCAAT+CGG | 0.519484 | 1_2:+5085570 | Msa0051040:CDS |
GTTCCTACACTTGTTCCTCC+AGG | 0.522078 | 1_2:+5087021 | Msa0051040:CDS |
GGTCAGAAAGCTGATGCAGC+AGG | 0.525891 | 1_2:+5089022 | Msa0051040:CDS |
CTAGAGAGAGCAAGAACCCT+AGG | 0.526198 | 1_2:-5078249 | None:intergenic |
GAGGTTCATTTGATGAAGAT+CGG | 0.527546 | 1_2:+5085764 | Msa0051040:CDS |
TTTACCTCATCCACCAGAAG+TGG | 0.528959 | 1_2:-5086890 | None:intergenic |
CTGCAAAACTATACAAGCTA+AGG | 0.529157 | 1_2:+5080101 | Msa0051040:CDS |
TGCATTGATATGCAGCGTAA+AGG | 0.531677 | 1_2:-5088974 | None:intergenic |
CTATATCCTCTCTCATGTGC+CGG | 0.533397 | 1_2:-5084445 | None:intergenic |
ATGATAAAACTTGGCCAAAG+TGG | 0.534570 | 1_2:-5091135 | None:intergenic |
GGCCAAAGTGGGCACAATGT+TGG | 0.535297 | 1_2:-5091123 | None:intergenic |
ATTGCGGAGGAGCCACACTT+TGG | 0.535826 | 1_2:-5080366 | None:intergenic |
TTTGACAGCCCAAGCTGGAA+AGG | 0.535949 | 1_2:-5091742 | None:intergenic |
AGTAGATTTCGCCATTTCGC+CGG | 0.537886 | 1_2:-5078085 | None:intergenic |
AGTACATTCAGGGACAGTCT+AGG | 0.538864 | 1_2:+5090407 | Msa0051040:CDS |
CGTATGGAGCAGTACATTCA+GGG | 0.540146 | 1_2:+5090397 | Msa0051040:CDS |
ATCAGATACTGTAGAAGTAT+CGG | 0.542477 | 1_2:-5086837 | None:intergenic |
GTGTGTCGCAGGTGTTGTAT+GGG | 0.543774 | 1_2:+5084357 | Msa0051040:intron |
TTTCCTACAGCATTAACAAA+GGG | 0.545010 | 1_2:+5079805 | Msa0051040:intron |
AAGCGAGCCTTTAATAAATG+AGG | 0.548321 | 1_2:+5083259 | Msa0051040:CDS |
ATGTCCTGCACTTGTACCGC+AGG | 0.550211 | 1_2:-5086327 | None:intergenic |
TCTCAAAGTTTCTTTCAGAT+CGG | 0.551116 | 1_2:+5078048 | Msa0051040:five_prime_UTR |
GAGCCTTCAAGCCAAACAGT+TGG | 0.551912 | 1_2:-5086788 | None:intergenic |
GGTCGTTGGTATAGATGTTG+TGG | 0.552064 | 1_2:+5080581 | Msa0051040:CDS |
GTACATTCAGGGACAGTCTA+GGG | 0.552198 | 1_2:+5090408 | Msa0051040:CDS |
TGGTATAGATGTTGTGGAGT+TGG | 0.552996 | 1_2:+5080587 | Msa0051040:CDS |
GTCGTCACATGGCTAAACCT+AGG | 0.553281 | 1_2:+5078232 | Msa0051040:CDS |
ACTCAGAGTAATGTGAAAGA+TGG | 0.555269 | 1_2:+5081458 | Msa0051040:CDS |
AGACCTTGTCTCCCAGGCAG+AGG | 0.555832 | 1_2:+5081535 | Msa0051040:CDS |
GAGTTCGTTGGCAAACTCAC+GGG | 0.558303 | 1_2:-5086738 | None:intergenic |
TCTAATGTGCAGGTATGTCA+TGG | 0.560159 | 1_2:+5083151 | Msa0051040:intron |
CTGACCTGCGGTACAAGTGC+AGG | 0.560980 | 1_2:+5086323 | Msa0051040:CDS |
GCATAGATATCCGAGACTCT+AGG | 0.561277 | 1_2:-5089069 | None:intergenic |
GACGATATGGATGAATGGTT+AGG | 0.561367 | 1_2:+5084404 | Msa0051040:CDS |
TGCAGGTATGTCATGGGTGT+TGG | 0.561387 | 1_2:+5083158 | Msa0051040:intron |
CGATGCGAAATATTGATGAC+AGG | 0.564291 | 1_2:+5080392 | Msa0051040:CDS |
ACTGGCCTGATGATAAAACT+TGG | 0.564945 | 1_2:-5091144 | None:intergenic |
TTTCGCATCGTCCATTGCGG+AGG | 0.565572 | 1_2:-5080379 | None:intergenic |
GTGTTCTATCCTACATTCCC+AGG | 0.567457 | 1_2:+5089258 | Msa0051040:CDS |
TTCCTTATGGGACAAATGCA+AGG | 0.570541 | 1_2:+5091958 | Msa0051040:CDS |
AAAGTGTGGCTCCTCCGCAA+TGG | 0.571456 | 1_2:+5080368 | Msa0051040:CDS |
GCGGTTGCGTGTACCTTCTG+AGG | 0.571549 | 1_2:+5085636 | Msa0051040:CDS |
TGTACTAGCACGGAGTTCGT+TGG | 0.571800 | 1_2:-5086750 | None:intergenic |
GTTCACCGTTGCACCTGAAG+AGG | 0.573911 | 1_2:+5091373 | Msa0051040:CDS |
TCGTCACATGGCTAAACCTA+GGG | 0.575321 | 1_2:+5078233 | Msa0051040:CDS |
GACCCAAGCAATTCTTGTCA+AGG | 0.576128 | 1_2:-5086472 | None:intergenic |
GGAGTTCGTTGGCAAACTCA+CGG | 0.578167 | 1_2:-5086739 | None:intergenic |
CAAGCTTTCTAGTCGTCACA+TGG | 0.580101 | 1_2:+5078221 | Msa0051040:CDS |
GGGCACTTCAAGACCGCGCA+AGG | 0.583310 | 1_2:-5085827 | None:intergenic |
TGGCTTGAAGGCTCAACTAG+TGG | 0.583999 | 1_2:+5086797 | Msa0051040:CDS |
CTAATGTGCAGGTATGTCAT+GGG | 0.585515 | 1_2:+5083152 | Msa0051040:intron |
CGATAAGGGCATACCTCAGA+AGG | 0.586076 | 1_2:-5085649 | None:intergenic |
TTGCATTTGTCCCATAAGGA+AGG | 0.588364 | 1_2:-5091956 | None:intergenic |
ATCAAATTGAAAGAAATGAA+CGG | 0.588598 | 1_2:+5089219 | Msa0051040:CDS |
CATTACTCTGAGTTGAAACA+GGG | 0.589470 | 1_2:-5081448 | None:intergenic |
ATCCGTGTTTCCAAAAGTCA+CGG | 0.589908 | 1_2:+5078180 | Msa0051040:CDS |
TGATAAAACTTGGCCAAAGT+GGG | 0.590443 | 1_2:-5091134 | None:intergenic |
ACCCAAAACATCTTTAGAGA+TGG | 0.596278 | 1_2:-5080547 | None:intergenic |
AAAATGTAGAAGCATGTGAA+TGG | 0.596677 | 1_2:+5085794 | Msa0051040:CDS |
ATCGGAGAAACAACAAACTC+CGG | 0.596903 | 1_2:+5078066 | Msa0051040:five_prime_UTR |
TCACTTCAGGATTTACTGGA+CGG | 0.597289 | 1_2:+5087817 | Msa0051040:CDS |
CATGTGACGACTAGAAAGCT+TGG | 0.598169 | 1_2:-5078220 | None:intergenic |
TTACGCTGCATATCAATGCA+TGG | 0.604703 | 1_2:+5088977 | Msa0051040:CDS |
TTGTAGACGATATGGATGAA+TGG | 0.606497 | 1_2:+5084399 | Msa0051040:CDS |
TTGCTGATTCACAAGCTCGC+CGG | 0.608321 | 1_2:-5078125 | None:intergenic |
AAGTGGGCACAATGTTGGCA+AGG | 0.609563 | 1_2:-5091118 | None:intergenic |
CCTCCTGGAGGAACAAGTGT+AGG | 0.612956 | 1_2:-5087024 | None:intergenic |
AACAGCGGGGACAGTTGAAG+AGG | 0.617770 | 1_2:+5086290 | Msa0051040:intron |
ATTTCCTACAGCATTAACAA+AGG | 0.620993 | 1_2:+5079804 | Msa0051040:intron |
CAGAGTAATGTGAAAGATGG+TGG | 0.621486 | 1_2:+5081461 | Msa0051040:CDS |
AAACTTGCTTCTTCGCCGGG+AGG | 0.622356 | 1_2:+5086523 | Msa0051040:CDS |
ACTAACCTCTTCAGGTGCAA+CGG | 0.625555 | 1_2:-5091378 | None:intergenic |
CTATACCAACGACCTTAGGA+AGG | 0.627890 | 1_2:-5080572 | None:intergenic |
TTACCTCATCCACCAGAAGT+GGG | 0.628965 | 1_2:-5086889 | None:intergenic |
AAACACTTGCCTATTCTGAA+AGG | 0.631024 | 1_2:-5090979 | None:intergenic |
TTTGCAACGTGTTTGACAGG+AGG | 0.631196 | 1_2:+5085745 | Msa0051040:CDS |
CTCTCATGCTCGCATAAGTG+AGG | 0.634936 | 1_2:-5085858 | None:intergenic |
GCACATTCAATGTTAAACTC+CGG | 0.636021 | 1_2:+5084426 | Msa0051040:CDS |
CATGAGAGAGGATATAGCAT+CGG | 0.642742 | 1_2:+5084451 | Msa0051040:CDS |
ATATTTCGCATCGTCCATTG+CGG | 0.642787 | 1_2:-5080382 | None:intergenic |
GGCCTGATCATGCTGACCTG+CGG | 0.645686 | 1_2:+5086311 | Msa0051040:CDS |
TAGTGGATGTACATTTACAC+TGG | 0.646809 | 1_2:+5080159 | Msa0051040:CDS |
CCTACACTTGTTCCTCCAGG+AGG | 0.654770 | 1_2:+5087024 | Msa0051040:CDS |
TAAACTCCGGCACATGAGAG+AGG | 0.656316 | 1_2:+5084439 | Msa0051040:CDS |
AGCTTGATAAGCTTCTTGAG+CGG | 0.662867 | 1_2:+5085617 | Msa0051040:CDS |
AGTGTAAATGTACATCCACT+AGG | 0.666732 | 1_2:-5080157 | None:intergenic |
ACTGCTCCATACGAGTTGCA+AGG | 0.673914 | 1_2:-5090387 | None:intergenic |
TAACCTTAGAAGCCAAAGTG+TGG | 0.674900 | 1_2:+5080354 | Msa0051040:CDS |
GGCAGAGGAAGAGGACATGG+AGG | 0.686109 | 1_2:+5081550 | Msa0051040:CDS |
CTGGCGACGATGTTGAACTC+CGG | 0.706984 | 1_2:+5078106 | Msa0051040:CDS |
CAACTCTCTCTCAGTCATAG+CGG | 0.712038 | 1_2:-5081495 | None:intergenic |
AAATAACAAATCTCTCATCG+AGG | 0.720933 | 1_2:+5085594 | Msa0051040:CDS |
CCGTTAACAACACCTCCTGG+AGG | 0.723227 | 1_2:-5087036 | None:intergenic |
TGGTTGACTAGTGCCTTGCG+CGG | 0.736160 | 1_2:+5085814 | Msa0051040:CDS |
ATTACTCTGAGTTGAAACAG+GGG | 0.762722 | 1_2:-5081447 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAAAAAATTTAAAATTAT+AGG | - | chr1_2:5082613-5082632 | None:intergenic | 0.0% |
!!! | ATTTTATATATATTTTTATT+TGG | + | chr1_2:5083719-5083738 | Msa0051040:intron | 0.0% |
!! | AATTTATTATATAAAATTTA+AGG | + | chr1_2:5090056-5090075 | Msa0051040:intron | 0.0% |
!! | TAATATTAATATGTTTGAAT+GGG | - | chr1_2:5081017-5081036 | None:intergenic | 10.0% |
!! | ATAATATTAATATGTTTGAA+TGG | - | chr1_2:5081018-5081037 | None:intergenic | 10.0% |
!! | CCTATATTATAAATAAAATT+TGG | - | chr1_2:5081756-5081775 | None:intergenic | 10.0% |
!!! | CCAAATTTTATTTATAATAT+AGG | + | chr1_2:5081753-5081772 | Msa0051040:intron | 10.0% |
!!! | AATATATGTATATTTTACAA+GGG | - | chr1_2:5081972-5081991 | None:intergenic | 10.0% |
!!! | AAATATATGTATATTTTACA+AGG | - | chr1_2:5081973-5081992 | None:intergenic | 10.0% |
!!! | AATATATGTATATTTTACAA+GGG | - | chr1_2:5081972-5081991 | None:intergenic | 10.0% |
!!! | AAATATATGTATATTTTACA+AGG | - | chr1_2:5081973-5081992 | None:intergenic | 10.0% |
!!! | TAACCATATTTTTAATTATA+AGG | + | chr1_2:5082194-5082213 | Msa0051040:intron | 10.0% |
!!! | TCTTTTTTTTAATTAAAAAG+TGG | - | chr1_2:5083306-5083325 | None:intergenic | 10.0% |
!!! | TATATTTTTATTTGGTTTAT+TGG | + | chr1_2:5083727-5083746 | Msa0051040:intron | 10.0% |
!!! | AATATTATTTTAAACTCAAA+AGG | - | chr1_2:5085322-5085341 | None:intergenic | 10.0% |
!! | AAAATAATATTACTTAGATT+TGG | + | chr1_2:5085331-5085350 | Msa0051040:intron | 10.0% |
!!! | ATATCTTTGAAAATAATTTA+TGG | + | chr1_2:5085357-5085376 | Msa0051040:intron | 10.0% |
!!! | TTAATTTCTACAATTTTAAT+TGG | + | chr1_2:5085954-5085973 | Msa0051040:intron | 10.0% |
!!! | TCTATAATTTTTTTTTTTGT+TGG | + | chr1_2:5087731-5087750 | Msa0051040:intron | 10.0% |
!!! | GAAGTTTATTTATTTAATTT+TGG | + | chr1_2:5089607-5089626 | Msa0051040:intron | 10.0% |
!! | TATAATATCAACATATAATT+AGG | + | chr1_2:5090204-5090223 | Msa0051040:intron | 10.0% |
!!! | AAATTGATATAGAATATTTT+AGG | - | chr1_2:5091716-5091735 | None:intergenic | 10.0% |
!! | AAAATTAACTTTGATATGTT+TGG | + | chr1_2:5078909-5078928 | Msa0051040:intron | 15.0% |
!!! | AAAGTGATTTTGTTTTATAA+GGG | + | chr1_2:5079681-5079700 | Msa0051040:intron | 15.0% |
!! | ACAAAAACAAAAAATAAACA+CGG | - | chr1_2:5080036-5080055 | None:intergenic | 15.0% |
!!! | GTTTATTTTTTGTTTTTGTT+TGG | + | chr1_2:5080037-5080056 | Msa0051040:intron | 15.0% |
!! | AAATCAATTAAAAGTTAATG+AGG | - | chr1_2:5081217-5081236 | None:intergenic | 15.0% |
!!! | TTTTTACAAAAATGTGAAAT+AGG | + | chr1_2:5081415-5081434 | Msa0051040:intron | 15.0% |
!! | TTATTTATTTATTCAATTGC+TGG | + | chr1_2:5081669-5081688 | Msa0051040:intron | 15.0% |
!! | TTATTTATAATATAGGTACA+TGG | + | chr1_2:5081760-5081779 | Msa0051040:intron | 15.0% |
!! | TGTCCTTATAATTAAAAATA+TGG | - | chr1_2:5082200-5082219 | None:intergenic | 15.0% |
!! | AAAAAAAACTTAAATCAGAA+GGG | - | chr1_2:5082524-5082543 | None:intergenic | 15.0% |
!! | TAAAAAAAACTTAAATCAGA+AGG | - | chr1_2:5082525-5082544 | None:intergenic | 15.0% |
!! | GTAAAATCTTAAATTTGAAT+TGG | + | chr1_2:5082556-5082575 | Msa0051040:intron | 15.0% |
!!! | TTTGAAATTTTTTAGCAAAT+TGG | + | chr1_2:5082826-5082845 | Msa0051040:intron | 15.0% |
!!! | TGTTTGTAATTTTTTTTCAA+GGG | + | chr1_2:5082877-5082896 | Msa0051040:intron | 15.0% |
!! | TAAATAAAAAAATTGTCAGT+TGG | + | chr1_2:5083073-5083092 | Msa0051040:intron | 15.0% |
!!! | CTTGTTACAAATTTTTTATT+TGG | - | chr1_2:5084139-5084158 | None:intergenic | 15.0% |
!! | TTGCAAAATTTATACTTTAA+AGG | + | chr1_2:5084299-5084318 | Msa0051040:intron | 15.0% |
!! | GTAAAATAAGCAAATAAAAA+AGG | + | chr1_2:5085271-5085290 | Msa0051040:intron | 15.0% |
!!! | GATTAGAAATTTTAAAATAG+AGG | + | chr1_2:5085491-5085510 | Msa0051040:intron | 15.0% |
!! | AATTTCAAACATTTATTTAC+AGG | + | chr1_2:5086715-5086734 | Msa0051040:intron | 15.0% |
!! | AAAAAATTGTGTTGAAATAA+CGG | - | chr1_2:5086927-5086946 | None:intergenic | 15.0% |
!! | ATAAAATGTATAATTCTTCA+TGG | + | chr1_2:5086953-5086972 | Msa0051040:intron | 15.0% |
!!! | CATCTTTTAAAAATATCAAA+AGG | - | chr1_2:5087890-5087909 | None:intergenic | 15.0% |
!!! | TATGAAGATATCATTTTATA+AGG | - | chr1_2:5088842-5088861 | None:intergenic | 15.0% |
!!! | ATAATAAGAGATATTTTTCT+AGG | - | chr1_2:5089415-5089434 | None:intergenic | 15.0% |
!!! | TATAATTTTTCCATCTATTT+TGG | + | chr1_2:5089774-5089793 | Msa0051040:intron | 15.0% |
!! | TCAGAATTGTTAATTTAAAA+TGG | - | chr1_2:5089802-5089821 | None:intergenic | 15.0% |
!!! | ATTTTAAATTAACAATTCTG+AGG | + | chr1_2:5089801-5089820 | Msa0051040:intron | 15.0% |
!!! | AAATATTGACTTTTTAAAGT+AGG | - | chr1_2:5089828-5089847 | None:intergenic | 15.0% |
!! | TTTAAATATATGATGAAAGT+TGG | + | chr1_2:5090179-5090198 | Msa0051040:intron | 15.0% |
!! | TTAAATATATGATGAAAGTT+GGG | + | chr1_2:5090180-5090199 | Msa0051040:intron | 15.0% |
!! | ATTGTAAATTAAAACATGTT+GGG | + | chr1_2:5092611-5092630 | Msa0051040:intron | 15.0% |
!!! | ATTTTTTTGTAAATACTTCT+AGG | + | chr1_2:5092660-5092679 | Msa0051040:intron | 15.0% |
!!! | CTAAACAGTTATTATTTCTT+AGG | - | chr1_2:5078584-5078603 | None:intergenic | 20.0% |
!! | CTAAGAAATAATAACTGTTT+AGG | + | chr1_2:5078582-5078601 | Msa0051040:intron | 20.0% |
!! | TTAACAACTTACTATCAATT+TGG | - | chr1_2:5079124-5079143 | None:intergenic | 20.0% |
!! | ATAGTAAGTTGTTAAAATAC+AGG | + | chr1_2:5079129-5079148 | Msa0051040:intron | 20.0% |
!! | TAGTAAGTTGTTAAAATACA+GGG | + | chr1_2:5079130-5079149 | Msa0051040:intron | 20.0% |
!!! | TTTTCGAAAATCTTTAACAA+CGG | + | chr1_2:5079570-5079589 | Msa0051040:intron | 20.0% |
!!! | GAAAGTGATTTTGTTTTATA+AGG | + | chr1_2:5079680-5079699 | Msa0051040:intron | 20.0% |
!! | TAATAATAACTTACTATGCA+TGG | + | chr1_2:5080721-5080740 | Msa0051040:intron | 20.0% |
!! | GATTTACTCAAATTAAATCA+GGG | - | chr1_2:5080972-5080991 | None:intergenic | 20.0% |
!! | TAGATTATAGATGTCTTAAT+TGG | + | chr1_2:5081037-5081056 | Msa0051040:intron | 20.0% |
!!! | ACATATTTTGACAATTTTTG+TGG | - | chr1_2:5081126-5081145 | None:intergenic | 20.0% |
!! | AAAAGTTAATGAGGTTAATT+TGG | - | chr1_2:5081208-5081227 | None:intergenic | 20.0% |
!!! | CAAAAAATGACAATTGTTTT+AGG | + | chr1_2:5081340-5081359 | Msa0051040:intron | 20.0% |
!! | ATTAAGTCCTTTAAATTCTA+GGG | + | chr1_2:5081692-5081711 | Msa0051040:intron | 20.0% |
!! | TCAGATTAATTAAAAAAGAG+TGG | - | chr1_2:5082299-5082318 | None:intergenic | 20.0% |
!!! | TGATATTTTAGTATCTATCA+AGG | + | chr1_2:5082787-5082806 | Msa0051040:intron | 20.0% |
!!! | GTGTTTGTAATTTTTTTTCA+AGG | + | chr1_2:5082876-5082895 | Msa0051040:intron | 20.0% |
!! | AGTAATACCTCATTTATTAA+AGG | - | chr1_2:5083269-5083288 | None:intergenic | 20.0% |
!! | TAATAACAATCAAACAAAAG+TGG | - | chr1_2:5083341-5083360 | None:intergenic | 20.0% |
!!! | AAAATTAAGAAGTACAAAAC+TGG | + | chr1_2:5083446-5083465 | Msa0051040:intron | 20.0% |
!! | ATATATTGCATAGTGTATTT+AGG | - | chr1_2:5083686-5083705 | None:intergenic | 20.0% |
!!! | TGTAAGATTTAAGATATTAC+AGG | - | chr1_2:5083803-5083822 | None:intergenic | 20.0% |
!! | TTATTATCATAAATGTGAAG+TGG | - | chr1_2:5083975-5083994 | None:intergenic | 20.0% |
!! | TGATAATAAATAAACACCAA+AGG | + | chr1_2:5083986-5084005 | Msa0051040:intron | 20.0% |
!! | ATATTATCCTTATTAACCTT+TGG | - | chr1_2:5084005-5084024 | None:intergenic | 20.0% |
!!! | AGCATTTTTTATTTGTATGA+GGG | + | chr1_2:5084890-5084909 | Msa0051040:intron | 20.0% |
!! | CAAAAGGAAGATATTAAAAA+GGG | - | chr1_2:5085306-5085325 | None:intergenic | 20.0% |
!! | TCAAAAGGAAGATATTAAAA+AGG | - | chr1_2:5085307-5085326 | None:intergenic | 20.0% |
!!! | TACTTTTTTGTTTGTTTTGA+TGG | + | chr1_2:5085520-5085539 | Msa0051040:intron | 20.0% |
!!! | AAATTGTATCTAATTTTAGC+TGG | + | chr1_2:5085674-5085693 | Msa0051040:intron | 20.0% |
!! | ATCATTAAAATAAATAAGCC+AGG | - | chr1_2:5085709-5085728 | None:intergenic | 20.0% |
!!! | TTTCTACAATTTTAATTGGT+TGG | + | chr1_2:5085958-5085977 | Msa0051040:intron | 20.0% |
!! | AATCAAAATAGATGACTTTA+AGG | - | chr1_2:5086039-5086058 | None:intergenic | 20.0% |
!!! | AATTAAAATCTACTTTTGTC+AGG | + | chr1_2:5086105-5086124 | Msa0051040:CDS | 20.0% |
!! | AATTCTTGGATTGAATTTAT+TGG | + | chr1_2:5086244-5086263 | Msa0051040:intron | 20.0% |
!!! | TGATATTTTTAAAAGATGAG+AGG | + | chr1_2:5087892-5087911 | Msa0051040:intron | 20.0% |
!!! | GATATTTTTAAAAGATGAGA+GGG | + | chr1_2:5087893-5087912 | Msa0051040:intron | 20.0% |
!!! | TTTTCTTTAGAAATTATCGT+GGG | - | chr1_2:5088135-5088154 | None:intergenic | 20.0% |
!!! | ATTTTCTTTAGAAATTATCG+TGG | - | chr1_2:5088136-5088155 | None:intergenic | 20.0% |
!! | ATCTTGAGATATACAAAATA+TGG | + | chr1_2:5088299-5088318 | Msa0051040:intron | 20.0% |
!! | TTCTATATACAAAAAGACAT+AGG | + | chr1_2:5088651-5088670 | Msa0051040:intron | 20.0% |
!!! | GTTTTCCAATTAAATGAATT+GGG | - | chr1_2:5089171-5089190 | None:intergenic | 20.0% |
!!! | AGTTTTCCAATTAAATGAAT+TGG | - | chr1_2:5089172-5089191 | None:intergenic | 20.0% |
!!! | TCATTTAATTGGAAAACTTT+TGG | + | chr1_2:5089174-5089193 | Msa0051040:intron | 20.0% |
!! | ATCAAATTGAAAGAAATGAA+CGG | + | chr1_2:5089219-5089238 | Msa0051040:CDS | 20.0% |
!! | ACAGCTAATTATATAAAGTT+TGG | + | chr1_2:5089378-5089397 | Msa0051040:intron | 20.0% |
!!! | ATTATATAAAGTTTGGAACA+TGG | + | chr1_2:5089385-5089404 | Msa0051040:intron | 20.0% |
!! | TATCTTTAATGAATACAAGA+TGG | - | chr1_2:5089458-5089477 | None:intergenic | 20.0% |
!! | ATAAATAAACTTCACTCAAA+AGG | - | chr1_2:5089600-5089619 | None:intergenic | 20.0% |
!! | TAAATATATGATGAAAGTTG+GGG | + | chr1_2:5090181-5090200 | Msa0051040:intron | 20.0% |
!!! | TTACAAATTTTGTATATGCT+TGG | - | chr1_2:5090444-5090463 | None:intergenic | 20.0% |
!! | TGAGAAAAAGATGAAAAATA+GGG | - | chr1_2:5091237-5091256 | None:intergenic | 20.0% |
!! | TTGAGAAAAAGATGAAAAAT+AGG | - | chr1_2:5091238-5091257 | None:intergenic | 20.0% |
!!! | AAAAAAAGTGATAATGAGTT+GGG | - | chr1_2:5091289-5091308 | None:intergenic | 20.0% |
!!! | AAAAAAAAGTGATAATGAGT+TGG | - | chr1_2:5091290-5091309 | None:intergenic | 20.0% |
!! | TTATACAAGAATTCTAGATA+TGG | - | chr1_2:5091458-5091477 | None:intergenic | 20.0% |
!! | CTTAAAGTAAAATTCCTTAT+AGG | + | chr1_2:5091525-5091544 | Msa0051040:intron | 20.0% |
!! | TAAAAAACATACATCCTATA+AGG | - | chr1_2:5091542-5091561 | None:intergenic | 20.0% |
!!! | TAGAATATTTTAGGATTTTC+AGG | - | chr1_2:5091707-5091726 | None:intergenic | 20.0% |
!! | TATTTAAAGAAGAAAAGAGT+CGG | - | chr1_2:5091813-5091832 | None:intergenic | 20.0% |
!! | TAACTGAATTACTGTAAATA+AGG | - | chr1_2:5092020-5092039 | None:intergenic | 20.0% |
!! | TTACAGTAATTCAGTTAATA+AGG | + | chr1_2:5092023-5092042 | Msa0051040:intron | 20.0% |
!!! | CTAAGATAAATATGCAATTT+TGG | + | chr1_2:5092082-5092101 | Msa0051040:intron | 20.0% |
!! | AATAGTTTCACCATATTATT+CGG | - | chr1_2:5092216-5092235 | None:intergenic | 20.0% |
!! | GATTGTAAATTAAAACATGT+TGG | + | chr1_2:5092610-5092629 | Msa0051040:intron | 20.0% |
!! | ACAAAAAAAAGATTAGAAGA+TGG | - | chr1_2:5092923-5092942 | None:intergenic | 20.0% |
!! | TCATTTTCTCAAATAACTAC+CGG | - | chr1_2:5078428-5078447 | None:intergenic | 25.0% |
!! | GTTTTATAATGCATAAGCTA+TGG | + | chr1_2:5078604-5078623 | Msa0051040:intron | 25.0% |
!!! | TACATCTCTAGAATCAAATA+TGG | - | chr1_2:5078890-5078909 | None:intergenic | 25.0% |
! | ACTCTAATAAAATGTCAAGT+TGG | - | chr1_2:5079191-5079210 | None:intergenic | 25.0% |
! | AACGGATAAAACTTTCAAAA+AGG | + | chr1_2:5079588-5079607 | Msa0051040:intron | 25.0% |
! | ACGGATAAAACTTTCAAAAA+GGG | + | chr1_2:5079589-5079608 | Msa0051040:intron | 25.0% |
!!! | TGATTTTGTTTTATAAGGGA+TGG | + | chr1_2:5079685-5079704 | Msa0051040:intron | 25.0% |
! | GAAATTTAACAAATGATCAC+AGG | - | chr1_2:5079753-5079772 | None:intergenic | 25.0% |
! | TTTCACATTTCTGTTATTGT+TGG | + | chr1_2:5079769-5079788 | Msa0051040:intron | 25.0% |
! | CCAAATAAAAGAGAATAAAG+GGG | - | chr1_2:5079900-5079919 | None:intergenic | 25.0% |
! | CCCAAATAAAAGAGAATAAA+GGG | - | chr1_2:5079901-5079920 | None:intergenic | 25.0% |
!!! | CCCTTTATTCTCTTTTATTT+GGG | + | chr1_2:5079898-5079917 | Msa0051040:intron | 25.0% |
! | TCCCAAATAAAAGAGAATAA+AGG | - | chr1_2:5079902-5079921 | None:intergenic | 25.0% |
! | ACAAGAAACTAGTTAATAGA+AGG | - | chr1_2:5080072-5080091 | None:intergenic | 25.0% |
! | AGCATAAGATCTTTCATTTA+TGG | - | chr1_2:5080192-5080211 | None:intergenic | 25.0% |
! | AATTCAAGAAGCAAATGATT+AGG | - | chr1_2:5080304-5080323 | None:intergenic | 25.0% |
!! | TCTAAGAGTGTATAATTTAG+TGG | + | chr1_2:5080436-5080455 | Msa0051040:intron | 25.0% |
!!! | TGTTTTGAAATTTTGAGTAG+AGG | + | chr1_2:5080817-5080836 | Msa0051040:intron | 25.0% |
!!! | GTTTTGAAATTTTGAGTAGA+GGG | + | chr1_2:5080818-5080837 | Msa0051040:intron | 25.0% |
! | CACTTAAAAACATCAAAACA+AGG | - | chr1_2:5080881-5080900 | None:intergenic | 25.0% |
!!! | TGTTTTGATGTTTTTAAGTG+AGG | + | chr1_2:5080881-5080900 | Msa0051040:intron | 25.0% |
! | AATTTCTAACTCTCAAGTAA+GGG | - | chr1_2:5080927-5080946 | None:intergenic | 25.0% |
! | TAATTTCTAACTCTCAAGTA+AGG | - | chr1_2:5080928-5080947 | None:intergenic | 25.0% |
! | GGATTTACTCAAATTAAATC+AGG | - | chr1_2:5080973-5080992 | None:intergenic | 25.0% |
!! | TTTTGACAATTTTTGTGGAA+TGG | - | chr1_2:5081121-5081140 | None:intergenic | 25.0% |
!! | ATGTCATTTCACACAAATTA+AGG | + | chr1_2:5081142-5081161 | Msa0051040:intron | 25.0% |
!!! | TATGACTTAGAAGGTATTAT+TGG | + | chr1_2:5081290-5081309 | Msa0051040:intron | 25.0% |
! | TGACAATTAATATGAGACAA+AGG | + | chr1_2:5081383-5081402 | Msa0051040:intron | 25.0% |
! | GACAATTAATATGAGACAAA+GGG | + | chr1_2:5081384-5081403 | Msa0051040:intron | 25.0% |
! | CTTTGACTCAAATGATATTA+AGG | + | chr1_2:5081601-5081620 | Msa0051040:intron | 25.0% |
! | GATTAAGTCCTTTAAATTCT+AGG | + | chr1_2:5081691-5081710 | Msa0051040:intron | 25.0% |
! | TTTGGCTAGAAATTGTATAA+AGG | - | chr1_2:5081738-5081757 | None:intergenic | 25.0% |
!!! | TAAGGGTATAACTACAATTT+TGG | - | chr1_2:5081805-5081824 | None:intergenic | 25.0% |
! | AATTGTAGTTATACCCTTAT+TGG | + | chr1_2:5081806-5081825 | Msa0051040:intron | 25.0% |
! | ATTGTAGTTATACCCTTATT+GGG | + | chr1_2:5081807-5081826 | Msa0051040:intron | 25.0% |
! | AAACATTTATCTAATGCCAA+AGG | - | chr1_2:5081887-5081906 | None:intergenic | 25.0% |
!!! | GGTGGTCAAAATTTTAATAA+GGG | + | chr1_2:5082124-5082143 | Msa0051040:intron | 25.0% |
! | TTAGTCCATAAAACATTACA+CGG | - | chr1_2:5082166-5082185 | None:intergenic | 25.0% |
! | ATAGCATGTCTATATATTTG+TGG | + | chr1_2:5082268-5082287 | Msa0051040:intron | 25.0% |
! | TAAAATTATAGGACATAGCA+TGG | - | chr1_2:5082602-5082621 | None:intergenic | 25.0% |
!! | AATTGGCATTTTCAATTCTT+AGG | + | chr1_2:5082843-5082862 | Msa0051040:intron | 25.0% |
!! | ATTGGCATTTTCAATTCTTA+GGG | + | chr1_2:5082844-5082863 | Msa0051040:intron | 25.0% |
!!! | TTTTTTTTCAAGGGTATCTT+TGG | + | chr1_2:5082886-5082905 | Msa0051040:intron | 25.0% |
!!! | TTTTTTTCAAGGGTATCTTT+GGG | + | chr1_2:5082887-5082906 | Msa0051040:intron | 25.0% |
!! | TAATATTTTCTCAAGAGTGA+AGG | - | chr1_2:5082913-5082932 | None:intergenic | 25.0% |
!!! | CCAGAAAATTTTGATGATAA+GGG | - | chr1_2:5082950-5082969 | None:intergenic | 25.0% |
!!! | TCCAGAAAATTTTGATGATA+AGG | - | chr1_2:5082951-5082970 | None:intergenic | 25.0% |
! | ACATATGAATTCTCTAAACT+AGG | - | chr1_2:5082999-5083018 | None:intergenic | 25.0% |
!! | ATTAAGATTTTCTAATGTGC+AGG | + | chr1_2:5083141-5083160 | Msa0051040:intron | 25.0% |
!! | ATTTTTAATGATCTCCAAGT+TGG | - | chr1_2:5083380-5083399 | None:intergenic | 25.0% |
! | TCAATTCTTGTTGCAAATTT+GGG | - | chr1_2:5083427-5083446 | None:intergenic | 25.0% |
! | TTCAATTCTTGTTGCAAATT+TGG | - | chr1_2:5083428-5083447 | None:intergenic | 25.0% |
!! | CATCTTGAATGATCATATTT+TGG | - | chr1_2:5083489-5083508 | None:intergenic | 25.0% |
! | AAACTAAAGCTAGATTGATT+AGG | + | chr1_2:5083526-5083545 | Msa0051040:intron | 25.0% |
! | TAAGAACTGTAAAAGATAGA+GGG | + | chr1_2:5083556-5083575 | Msa0051040:intron | 25.0% |
! | TTGACCTTTATATTGTTAGA+TGG | + | chr1_2:5083624-5083643 | Msa0051040:intron | 25.0% |
! | TCATCCATCTAACAATATAA+AGG | - | chr1_2:5083631-5083650 | None:intergenic | 25.0% |
! | TTATATTGTTAGATGGATGA+TGG | + | chr1_2:5083631-5083650 | Msa0051040:intron | 25.0% |
!! | TTGAAAATGACACTCTTTTT+GGG | - | chr1_2:5083872-5083891 | None:intergenic | 25.0% |
!! | ATTGAAAATGACACTCTTTT+TGG | - | chr1_2:5083873-5083892 | None:intergenic | 25.0% |
! | TAACTAGACAATACAATTGA+GGG | - | chr1_2:5083920-5083939 | None:intergenic | 25.0% |
! | TTAACTAGACAATACAATTG+AGG | - | chr1_2:5083921-5083940 | None:intergenic | 25.0% |
! | GAAGTGGAAAATAATGATTT+GGG | - | chr1_2:5083959-5083978 | None:intergenic | 25.0% |
! | TGAAGTGGAAAATAATGATT+TGG | - | chr1_2:5083960-5083979 | None:intergenic | 25.0% |
! | ATAAACACCAAAGGTTAATA+AGG | + | chr1_2:5083995-5084014 | Msa0051040:intron | 25.0% |
! | GATTAAGAAAAGATGACAAA+TGG | - | chr1_2:5084052-5084071 | None:intergenic | 25.0% |
!! | TTTTCTTAATCTGTGTGAAA+TGG | + | chr1_2:5084061-5084080 | Msa0051040:intron | 25.0% |
! | GTATAACAGAGAAAACAAAA+GGG | - | chr1_2:5084680-5084699 | None:intergenic | 25.0% |
! | AGTATAACAGAGAAAACAAA+AGG | - | chr1_2:5084681-5084700 | None:intergenic | 25.0% |
! | TATTTCCATTTCTGTTCTTA+AGG | - | chr1_2:5084746-5084765 | None:intergenic | 25.0% |
!!! | TCTTTCTTTCAGTTTTAAAC+TGG | - | chr1_2:5084834-5084853 | None:intergenic | 25.0% |
!!! | GAGCATTTTTTATTTGTATG+AGG | + | chr1_2:5084889-5084908 | Msa0051040:intron | 25.0% |
!!! | GCATTTTTTATTTGTATGAG+GGG | + | chr1_2:5084891-5084910 | Msa0051040:intron | 25.0% |
! | AGAGTAAAATTCTCGTATTA+AGG | + | chr1_2:5085000-5085019 | Msa0051040:intron | 25.0% |
! | GAGTAAAATTCTCGTATTAA+GGG | + | chr1_2:5085001-5085020 | Msa0051040:intron | 25.0% |
! | TAGATACAATTTACCGATAA+GGG | - | chr1_2:5085666-5085685 | None:intergenic | 25.0% |
! | TTAGATACAATTTACCGATA+AGG | - | chr1_2:5085667-5085686 | None:intergenic | 25.0% |
!!! | TTATTTTAATGATGCCTTTG+TGG | + | chr1_2:5085716-5085735 | Msa0051040:intron | 25.0% |
!!! | TATTTTAATGATGCCTTTGT+GGG | + | chr1_2:5085717-5085736 | Msa0051040:intron | 25.0% |
!!! | AATTGAGAGTACTATGAATT+TGG | + | chr1_2:5085985-5086004 | Msa0051040:intron | 25.0% |
!!! | ATTGAGAGTACTATGAATTT+GGG | + | chr1_2:5085986-5086005 | Msa0051040:intron | 25.0% |
!!! | TGATAAAAGTTACTTTTCTC+AGG | + | chr1_2:5086184-5086203 | Msa0051040:CDS | 25.0% |
!!! | AATCGTTACTTTTGAATTCT+TGG | + | chr1_2:5086230-5086249 | Msa0051040:intron | 25.0% |
! | AAGATAAAAAAAGCAAGTTG+TGG | - | chr1_2:5086606-5086625 | None:intergenic | 25.0% |
!!! | ATGCTTTGCTTTTTATGTTT+TGG | + | chr1_2:5086671-5086690 | Msa0051040:intron | 25.0% |
! | TTTATTGAGTGAAATCAATG+TGG | - | chr1_2:5087298-5087317 | None:intergenic | 25.0% |
! | CATTAGATATAACTTCAAAG+AGG | - | chr1_2:5087354-5087373 | None:intergenic | 25.0% |
! | AAAACCTTGTTGAATGTTTA+TGG | - | chr1_2:5087411-5087430 | None:intergenic | 25.0% |
! | TTAATCTAAATCTCCTGTAA+TGG | - | chr1_2:5087618-5087637 | None:intergenic | 25.0% |
! | TTAAACAGAGGTTTATTGTA+TGG | + | chr1_2:5087634-5087653 | Msa0051040:intron | 25.0% |
!!! | CAGAATTTTTTCCTACAAAA+TGG | - | chr1_2:5087774-5087793 | None:intergenic | 25.0% |
!! | TGGAAGAAGTTATTTCATTA+AGG | + | chr1_2:5088070-5088089 | Msa0051040:intron | 25.0% |
! | AAAATATTTAGAAGCCAAGT+GGG | + | chr1_2:5088151-5088170 | Msa0051040:intron | 25.0% |
!!! | GATTGTTTGAGTTCATTTTT+GGG | - | chr1_2:5088282-5088301 | None:intergenic | 25.0% |
!!! | AGATTGTTTGAGTTCATTTT+TGG | - | chr1_2:5088283-5088302 | None:intergenic | 25.0% |
! | ATATACAAAATATGGACAGA+GGG | + | chr1_2:5088307-5088326 | Msa0051040:intron | 25.0% |
! | ATACAAAAGTCCAATAATGT+TGG | - | chr1_2:5088795-5088814 | None:intergenic | 25.0% |
! | ATCTTTATAGCTGTAAAATC+TGG | - | chr1_2:5088895-5088914 | None:intergenic | 25.0% |
! | AAGATGCTTTATATGATTTC+AGG | + | chr1_2:5088910-5088929 | Msa0051040:intron | 25.0% |
! | AATAGTCTTCTTCAATATAC+CGG | - | chr1_2:5089114-5089133 | None:intergenic | 25.0% |
! | ACTAACCCAATTCATTTAAT+TGG | + | chr1_2:5089163-5089182 | Msa0051040:intron | 25.0% |
! | GTTCATTTCTTTCAATTTGA+TGG | - | chr1_2:5089220-5089239 | None:intergenic | 25.0% |
! | AAGAGGAAAAGTAGAAAATA+TGG | - | chr1_2:5089294-5089313 | None:intergenic | 25.0% |
! | AAAAGAACATCCTAATTCTT+TGG | - | chr1_2:5089326-5089345 | None:intergenic | 25.0% |
! | CTTTATATAATTAGCTGTGA+AGG | - | chr1_2:5089376-5089395 | None:intergenic | 25.0% |
!! | TACATTTTTGTTCTAGTACT+CGG | + | chr1_2:5089487-5089506 | Msa0051040:intron | 25.0% |
! | TAATCCATTTCATGTTGTTA+TGG | - | chr1_2:5089716-5089735 | None:intergenic | 25.0% |
! | TGAGACACTTAATATTTGTA+AGG | + | chr1_2:5089941-5089960 | Msa0051040:CDS | 25.0% |
! | ATCAAATCAAATGGATATCA+AGG | - | chr1_2:5089973-5089992 | None:intergenic | 25.0% |
! | GAATCACTTACAAAAAAAAC+AGG | - | chr1_2:5090488-5090507 | None:intergenic | 25.0% |
!!! | TACTGTCTTGGTATTTTTAT+GGG | + | chr1_2:5090539-5090558 | Msa0051040:intron | 25.0% |
! | CATTTAGTAATAGAGTAAAC+AGG | - | chr1_2:5090629-5090648 | None:intergenic | 25.0% |
! | ATCGAGAAAATTATAGTAGT+TGG | - | chr1_2:5090729-5090748 | None:intergenic | 25.0% |
!! | TCAATCTACTGATTAACTAT+TGG | + | chr1_2:5090851-5090870 | Msa0051040:intron | 25.0% |
! | TTAACTATTGGCATAATGTT+TGG | + | chr1_2:5090863-5090882 | Msa0051040:intron | 25.0% |
!!! | TGTTTGTGATATTTTTTCCA+AGG | - | chr1_2:5090916-5090935 | None:intergenic | 25.0% |
! | AGAAAAATATCTGCATACTT+TGG | - | chr1_2:5090942-5090961 | None:intergenic | 25.0% |
! | AGTATATGATCATGCTAATA+TGG | - | chr1_2:5091196-5091215 | None:intergenic | 25.0% |
! | AGAAAAAGATGAAAAATAGG+GGG | - | chr1_2:5091235-5091254 | None:intergenic | 25.0% |
! | GAGAAAAAGATGAAAAATAG+GGG | - | chr1_2:5091236-5091255 | None:intergenic | 25.0% |
! | AGAATTCTTGTATAACAAAC+AGG | + | chr1_2:5091463-5091482 | Msa0051040:intron | 25.0% |
! | AAGTTGTACTTATTCCTTAT+TGG | + | chr1_2:5091982-5092001 | Msa0051040:intron | 25.0% |
!! | TGTAAATAAGGTATCTTAGT+TGG | - | chr1_2:5092008-5092027 | None:intergenic | 25.0% |
!! | ATTTTGGATACACATGTAAA+AGG | + | chr1_2:5092098-5092117 | Msa0051040:intron | 25.0% |
! | ACATGTAAAAGGCAATTAAT+TGG | + | chr1_2:5092109-5092128 | Msa0051040:intron | 25.0% |
! | AATGTGAGATATCATTCAAA+TGG | - | chr1_2:5092333-5092352 | None:intergenic | 25.0% |
!! | TTAGAAATCCATTTTCACAT+TGG | - | chr1_2:5092389-5092408 | None:intergenic | 25.0% |
!! | TCTAATATGCTGTATTTTGT+TGG | + | chr1_2:5092404-5092423 | Msa0051040:intron | 25.0% |
!! | CTAATATGCTGTATTTTGTT+GGG | + | chr1_2:5092405-5092424 | Msa0051040:intron | 25.0% |
!!! | TTACTCAGGTATTGAAATTT+AGG | - | chr1_2:5092447-5092466 | None:intergenic | 25.0% |
!!! | AAGCATCAGCAATTTATTTT+GGG | - | chr1_2:5092509-5092528 | None:intergenic | 25.0% |
!! | ATTTCTTTTACAAGTTGCTT+AGG | + | chr1_2:5092536-5092555 | Msa0051040:intron | 25.0% |
TCTCAAAGTTTCTTTCAGAT+CGG | + | chr1_2:5078048-5078067 | Msa0051040:five_prime_UTR | 30.0% | |
GCATAAGCAAAAGTGAAATT+AGG | - | chr1_2:5078281-5078300 | None:intergenic | 30.0% | |
TTGACTGTTATTACATGTGT+CGG | + | chr1_2:5078453-5078472 | Msa0051040:intron | 30.0% | |
ATTTGACGATGAAATGTAGA+AGG | + | chr1_2:5078532-5078551 | Msa0051040:intron | 30.0% | |
! | ACATACATTTAGGGTTTGTT+TGG | - | chr1_2:5078846-5078865 | None:intergenic | 30.0% |
ACAAACCCTAAATGTATGTT+TGG | + | chr1_2:5078847-5078866 | Msa0051040:intron | 30.0% | |
TGGAACCAAACATACATTTA+GGG | - | chr1_2:5078855-5078874 | None:intergenic | 30.0% | |
! | GAGACTAAATTGATAGTTAG+TGG | + | chr1_2:5079085-5079104 | Msa0051040:intron | 30.0% |
ACAGTAAGTGGTTAAGTATA+GGG | + | chr1_2:5079164-5079183 | Msa0051040:intron | 30.0% | |
! | TTTGAAATAGTCGTAATCTC+AGG | + | chr1_2:5079221-5079240 | Msa0051040:intron | 30.0% |
TTGAAATAGTCGTAATCTCA+GGG | + | chr1_2:5079222-5079241 | Msa0051040:intron | 30.0% | |
! | AAATCAGTCTTTAACTTTGC+AGG | - | chr1_2:5079264-5079283 | None:intergenic | 30.0% |
TGCAAAGTTAAAGACTGATT+TGG | + | chr1_2:5079263-5079282 | Msa0051040:intron | 30.0% | |
!! | AAAGTTAAAGACTGATTTGG+CGG | + | chr1_2:5079266-5079285 | Msa0051040:intron | 30.0% |
! | ATTTTTGTGAGATAGCTAGT+TGG | + | chr1_2:5079328-5079347 | Msa0051040:intron | 30.0% |
! | GACTTGTGATTGATTTCATT+TGG | + | chr1_2:5079720-5079739 | Msa0051040:intron | 30.0% |
ATTTCCTACAGCATTAACAA+AGG | + | chr1_2:5079804-5079823 | Msa0051040:intron | 30.0% | |
TTTCCTACAGCATTAACAAA+GGG | + | chr1_2:5079805-5079824 | Msa0051040:intron | 30.0% | |
!!! | TCGAGTTTTGAAGTATTCTA+CGG | + | chr1_2:5079849-5079868 | Msa0051040:CDS | 30.0% |
AATAAAAGAGAATAAAGGGG+TGG | - | chr1_2:5079897-5079916 | None:intergenic | 30.0% | |
! | CCCCTTTATTCTCTTTTATT+TGG | + | chr1_2:5079897-5079916 | Msa0051040:intron | 30.0% |
ATGAAAAACAACAGTCAAAG+AGG | - | chr1_2:5080012-5080031 | None:intergenic | 30.0% | |
ATGAATGCATATGTCTTGTA+GGG | + | chr1_2:5080325-5080344 | Msa0051040:intron | 30.0% | |
!! | ACCATCTCTAAAGATGTTTT+GGG | + | chr1_2:5080546-5080565 | Msa0051040:CDS | 30.0% |
!! | TAAAGAAGCACTTATAAGAC+TGG | - | chr1_2:5080646-5080665 | None:intergenic | 30.0% |
TATTCATTAGAACAGAACCA+CGG | - | chr1_2:5080680-5080699 | None:intergenic | 30.0% | |
!!! | TGTTTTTAAGTGAGGAAAGA+AGG | + | chr1_2:5080889-5080908 | Msa0051040:intron | 30.0% |
TCAGTGGAAAATAATACCTT+CGG | + | chr1_2:5081253-5081272 | Msa0051040:intron | 30.0% | |
TACACACAATATGACTTAGA+AGG | + | chr1_2:5081281-5081300 | Msa0051040:intron | 30.0% | |
TACGATTAGTAAGAATATGC+TGG | + | chr1_2:5081633-5081652 | Msa0051040:intron | 30.0% | |
ATAATATAGGTACATGGACA+AGG | + | chr1_2:5081766-5081785 | Msa0051040:intron | 30.0% | |
TCCCTACCTTCTATAAAAAT+GGG | + | chr1_2:5082103-5082122 | Msa0051040:intron | 30.0% | |
!! | ACCCATTTTTATAGAAGGTA+GGG | - | chr1_2:5082107-5082126 | None:intergenic | 30.0% |
!! | GGGTGGTCAAAATTTTAATA+AGG | + | chr1_2:5082123-5082142 | Msa0051040:intron | 30.0% |
! | AAGATCCGTGTAATGTTTTA+TGG | + | chr1_2:5082158-5082177 | Msa0051040:intron | 30.0% |
! | GATCAGTTTCTTTTCAATAG+TGG | + | chr1_2:5082336-5082355 | Msa0051040:intron | 30.0% |
!!! | TTTTTTTCCCACAAGACTAA+TGG | + | chr1_2:5082425-5082444 | Msa0051040:intron | 30.0% |
!!! | TTTTTTCCCACAAGACTAAT+GGG | + | chr1_2:5082426-5082445 | Msa0051040:intron | 30.0% |
! | CCCTTATCATCAAAATTTTC+TGG | + | chr1_2:5082947-5082966 | Msa0051040:intron | 30.0% |
! | TAAACTAGGAAGTATGGATA+CGG | - | chr1_2:5082985-5083004 | None:intergenic | 30.0% |
ATTCTCTAAACTAGGAAGTA+TGG | - | chr1_2:5082991-5083010 | None:intergenic | 30.0% | |
TTCTTTGATATGATCCAACT+TGG | + | chr1_2:5083363-5083382 | Msa0051040:intron | 30.0% | |
CTTGGAGATCATTAAAAATG+AGG | + | chr1_2:5083381-5083400 | Msa0051040:intron | 30.0% | |
AAATTTGGGTACAAGTTGTA+CGG | - | chr1_2:5083413-5083432 | None:intergenic | 30.0% | |
CTAAGAACTGTAAAAGATAG+AGG | + | chr1_2:5083555-5083574 | Msa0051040:intron | 30.0% | |
! | AAAGATAGAGGGTGTATAAT+AGG | + | chr1_2:5083567-5083586 | Msa0051040:intron | 30.0% |
! | AAGATAGAGGGTGTATAATA+GGG | + | chr1_2:5083568-5083587 | Msa0051040:intron | 30.0% |
TATAATAGGGTGAACAAACA+GGG | + | chr1_2:5083581-5083600 | Msa0051040:intron | 30.0% | |
AACTAGACAATACAATTGAG+GGG | - | chr1_2:5083919-5083938 | None:intergenic | 30.0% | |
TCAAATGTGACAGTTATTGA+GGG | + | chr1_2:5084084-5084103 | Msa0051040:intron | 30.0% | |
GCTTAAAGCTTAATATGCTT+TGG | + | chr1_2:5084158-5084177 | Msa0051040:intron | 30.0% | |
ATATATATTTAACCCTCCTC+AGG | - | chr1_2:5084184-5084203 | None:intergenic | 30.0% | |
AACAAATGTTGTAGACGATA+TGG | + | chr1_2:5084391-5084410 | Msa0051040:CDS | 30.0% | |
GTACAACTTTGTGTTTGTAA+TGG | + | chr1_2:5084519-5084538 | Msa0051040:intron | 30.0% | |
!! | TTTGTAATGGTAGTGTTTTC+TGG | + | chr1_2:5084532-5084551 | Msa0051040:intron | 30.0% |
! | TGCGTTGTGTTCAATTTTTA+TGG | + | chr1_2:5084629-5084648 | Msa0051040:intron | 30.0% |
TTTCTGTTCTTAAGGACTTT+GGG | - | chr1_2:5084738-5084757 | None:intergenic | 30.0% | |
ATTTCTGTTCTTAAGGACTT+TGG | - | chr1_2:5084739-5084758 | None:intergenic | 30.0% | |
AAAGTCCTTAAGAACAGAAA+TGG | + | chr1_2:5084738-5084757 | Msa0051040:intron | 30.0% | |
AAAATGCTCCAAATTAAGCA+GGG | - | chr1_2:5084878-5084897 | None:intergenic | 30.0% | |
AAAAATGCTCCAAATTAAGC+AGG | - | chr1_2:5084879-5084898 | None:intergenic | 30.0% | |
AGTATTCAGCTGGAATAATA+AGG | + | chr1_2:5084924-5084943 | Msa0051040:intron | 30.0% | |
ACTTCTATCTTCAAAACAAG+AGG | - | chr1_2:5085038-5085057 | None:intergenic | 30.0% | |
! | AGATAAAACAGCATAATGGA+AGG | - | chr1_2:5085229-5085248 | None:intergenic | 30.0% |
GGAAAGATAAAACAGCATAA+TGG | - | chr1_2:5085233-5085252 | None:intergenic | 30.0% | |
TACAGAAAAGAAGAGAACTT+TGG | - | chr1_2:5085254-5085273 | None:intergenic | 30.0% | |
!!! | GTTTAGAAGCAACCATTTTT+TGG | + | chr1_2:5085379-5085398 | Msa0051040:intron | 30.0% |
AAATAACAAATCTCTCATCG+AGG | + | chr1_2:5085594-5085613 | Msa0051040:CDS | 30.0% | |
! | AAAATGTAGAAGCATGTGAA+TGG | + | chr1_2:5085794-5085813 | Msa0051040:CDS | 30.0% |
TCTCTCTTTGTTAAATCATC+TGG | + | chr1_2:5085902-5085921 | Msa0051040:intron | 30.0% | |
TTTGTTAAATCATCTGGCTA+AGG | + | chr1_2:5085908-5085927 | Msa0051040:intron | 30.0% | |
!! | TTGAGAGTACTATGAATTTG+GGG | + | chr1_2:5085987-5086006 | Msa0051040:intron | 30.0% |
GAGAAATTACTTTGCTAGTT+TGG | + | chr1_2:5086145-5086164 | Msa0051040:CDS | 30.0% | |
! | AAATTACTTTGCTAGTTTGG+TGG | + | chr1_2:5086148-5086167 | Msa0051040:CDS | 30.0% |
CATTTGAAGGTTAAATACAG+AGG | + | chr1_2:5086367-5086386 | Msa0051040:intron | 30.0% | |
CATGTAATAAGGTTACTTCT+CGG | - | chr1_2:5086636-5086655 | None:intergenic | 30.0% | |
! | ATCAGATACTGTAGAAGTAT+CGG | - | chr1_2:5086840-5086859 | None:intergenic | 30.0% |
! | TTACGATGATGATGATGATT+TGG | + | chr1_2:5087071-5087090 | Msa0051040:CDS | 30.0% |
! | TACGATGATGATGATGATTT+GGG | + | chr1_2:5087072-5087091 | Msa0051040:CDS | 30.0% |
! | TGATGATGATTTGGGAATTA+TGG | + | chr1_2:5087080-5087099 | Msa0051040:CDS | 30.0% |
TCAAACACTTCCTCTTTAAT+TGG | + | chr1_2:5087215-5087234 | Msa0051040:intron | 30.0% | |
CAAACACTTCCTCTTTAATT+GGG | + | chr1_2:5087216-5087235 | Msa0051040:intron | 30.0% | |
TATGTTTCACCCAATTAAAG+AGG | - | chr1_2:5087228-5087247 | None:intergenic | 30.0% | |
GAAATGAGATCCAAATAAAG+TGG | - | chr1_2:5087262-5087281 | None:intergenic | 30.0% | |
AATGCCATAAACATTCAACA+AGG | + | chr1_2:5087404-5087423 | Msa0051040:intron | 30.0% | |
!!! | CATTCAACAAGGTTTTAGTT+TGG | + | chr1_2:5087415-5087434 | Msa0051040:intron | 30.0% |
ACTATTGGACTATCATCTAT+TGG | - | chr1_2:5087564-5087583 | None:intergenic | 30.0% | |
ACTATAACCTAAACCATTAC+AGG | + | chr1_2:5087602-5087621 | Msa0051040:intron | 30.0% | |
TAAATCTCCTGTAATGGTTT+AGG | - | chr1_2:5087612-5087631 | None:intergenic | 30.0% | |
AGGAGATTTAGATTAAACAG+AGG | + | chr1_2:5087622-5087641 | Msa0051040:intron | 30.0% | |
! | TTCTAGTTGTTGCATAATGT+AGG | + | chr1_2:5087705-5087724 | Msa0051040:intron | 30.0% |
TTCCTACAAAATGGAAGAAA+TGG | - | chr1_2:5087765-5087784 | None:intergenic | 30.0% | |
!! | AGCTTTAAATGAATCACTTC+AGG | + | chr1_2:5087804-5087823 | Msa0051040:CDS | 30.0% |
!! | TTTTAAAAGATGAGAGGGTT+TGG | + | chr1_2:5087898-5087917 | Msa0051040:intron | 30.0% |
TAAGGAAGAAAAGACACATA+CGG | + | chr1_2:5088088-5088107 | Msa0051040:intron | 30.0% | |
GAAAATATTTAGAAGCCAAG+TGG | + | chr1_2:5088150-5088169 | Msa0051040:intron | 30.0% | |
TTTACTCTGCTTTAACTACT+TGG | - | chr1_2:5088203-5088222 | None:intergenic | 30.0% | |
GATATACAAAATATGGACAG+AGG | + | chr1_2:5088306-5088325 | Msa0051040:intron | 30.0% | |
ACTAAGAACATAAACTACCA+TGG | + | chr1_2:5088417-5088436 | Msa0051040:intron | 30.0% | |
ATAAACTACCATGGTAAAGA+GGG | + | chr1_2:5088426-5088445 | Msa0051040:intron | 30.0% | |
CACTAATTTATCCTGGATTT+GGG | - | chr1_2:5088513-5088532 | None:intergenic | 30.0% | |
TCACTAATTTATCCTGGATT+TGG | - | chr1_2:5088514-5088533 | None:intergenic | 30.0% | |
ATCCAGGATAAATTAGTGAA+TGG | + | chr1_2:5088515-5088534 | Msa0051040:intron | 30.0% | |
ATCCATTCACTAATTTATCC+TGG | - | chr1_2:5088520-5088539 | None:intergenic | 30.0% | |
AAATTGATACCCATCACTAA+GGG | - | chr1_2:5088565-5088584 | None:intergenic | 30.0% | |
! | CAATATTTAAAACTAAGCCC+AGG | + | chr1_2:5088758-5088777 | Msa0051040:intron | 30.0% |
ATGATATCTTCATAAACTGC+AGG | + | chr1_2:5088848-5088867 | Msa0051040:intron | 30.0% | |
ATAACAGAACGATATCTTTC+TGG | + | chr1_2:5089001-5089020 | Msa0051040:CDS | 30.0% | |
CTCAATCTTCTAAATGTGTT+TGG | - | chr1_2:5089141-5089160 | None:intergenic | 30.0% | |
! | AATATGGATCCATTTTACCT+GGG | - | chr1_2:5089278-5089297 | None:intergenic | 30.0% |
! | AAATATGGATCCATTTTACC+TGG | - | chr1_2:5089279-5089298 | None:intergenic | 30.0% |
TCTCTTATTATTGCAGTGAA+AGG | + | chr1_2:5089424-5089443 | Msa0051040:intron | 30.0% | |
AATGAATACAAGATGGAGTT+GGG | - | chr1_2:5089451-5089470 | None:intergenic | 30.0% | |
TAATGAATACAAGATGGAGT+TGG | - | chr1_2:5089452-5089471 | None:intergenic | 30.0% | |
ACAAAAATCACGTATACTTC+AGG | - | chr1_2:5089557-5089576 | None:intergenic | 30.0% | |
TAAAATGGCTCCAAAATAGA+TGG | - | chr1_2:5089787-5089806 | None:intergenic | 30.0% | |
! | AAATGGTTTCTCCTGATTTT+TGG | + | chr1_2:5089872-5089891 | Msa0051040:intron | 30.0% |
GAACATTGAATCCAAAAATC+AGG | - | chr1_2:5089886-5089905 | None:intergenic | 30.0% | |
!! | GATTTTTGGATTCAATGTTC+AGG | + | chr1_2:5089886-5089905 | Msa0051040:intron | 30.0% |
CTCAATGCAATTAAGATGTA+TGG | - | chr1_2:5089925-5089944 | None:intergenic | 30.0% | |
CAGTCTACAATCAAATCAAA+TGG | - | chr1_2:5089982-5090001 | None:intergenic | 30.0% | |
! | TGCATTTTTGCTAAAGTTGA+TGG | - | chr1_2:5090104-5090123 | None:intergenic | 30.0% |
! | AAAAATGCATGTCTGTTTTC+AGG | + | chr1_2:5090115-5090134 | Msa0051040:intron | 30.0% |
ACAGTAGACATCATAAAAAC+AGG | - | chr1_2:5090525-5090544 | None:intergenic | 30.0% | |
! | TTTTATGATGTCTACTGTCT+TGG | + | chr1_2:5090527-5090546 | Msa0051040:intron | 30.0% |
!! | CTACTGTCTTGGTATTTTTA+TGG | + | chr1_2:5090538-5090557 | Msa0051040:intron | 30.0% |
! | ATTTTTATCCTCTCCGTTTT+GGG | - | chr1_2:5090582-5090601 | None:intergenic | 30.0% |
! | TTTTTATCTGCATTCCAAAC+AGG | + | chr1_2:5090802-5090821 | Msa0051040:intron | 30.0% |
TGTATTTATTTCCACCTGTT+TGG | - | chr1_2:5090819-5090838 | None:intergenic | 30.0% | |
TAATACAAACTAACCTCTTC+AGG | - | chr1_2:5091389-5091408 | None:intergenic | 30.0% | |
AAATCCAGAACGAAAAGAAA+TGG | + | chr1_2:5091601-5091620 | Msa0051040:intron | 30.0% | |
! | TTTTCCATTTCTTTTCGTTC+TGG | - | chr1_2:5091608-5091627 | None:intergenic | 30.0% |
CGAAAAGAAATGGAAAAACA+AGG | + | chr1_2:5091611-5091630 | Msa0051040:intron | 30.0% | |
ATGTTAAAAACCAGCTTATC+TGG | + | chr1_2:5091781-5091800 | Msa0051040:CDS | 30.0% | |
TGTTAAAAACCAGCTTATCT+GGG | + | chr1_2:5091782-5091801 | Msa0051040:CDS | 30.0% | |
ATAAGCATGCAACAATACAA+AGG | - | chr1_2:5091837-5091856 | None:intergenic | 30.0% | |
!!! | TTTTTTTTGCTCTTCCACAT+AGG | + | chr1_2:5091868-5091887 | Msa0051040:intron | 30.0% |
TTTCTTATACATCGCATTGA+TGG | - | chr1_2:5091903-5091922 | None:intergenic | 30.0% | |
GCATATTTATCTTAGTGCAA+AGG | - | chr1_2:5092077-5092096 | None:intergenic | 30.0% | |
AGTTTGACTACCGAATAATA+TGG | + | chr1_2:5092203-5092222 | Msa0051040:intron | 30.0% | |
! | ATCTCACATTTTGTATAGTG+AGG | + | chr1_2:5092343-5092362 | Msa0051040:intron | 30.0% |
! | AATCCATTTTCACATTGGAA+AGG | - | chr1_2:5092384-5092403 | None:intergenic | 30.0% |
! | GTATTTTGTTGGGAAAGAAA+AGG | + | chr1_2:5092415-5092434 | Msa0051040:intron | 30.0% |
TCTTTCAATCAAGATTACTC+AGG | - | chr1_2:5092461-5092480 | None:intergenic | 30.0% | |
TTGATTGAAAGATGATGTGA+AGG | + | chr1_2:5092469-5092488 | Msa0051040:intron | 30.0% | |
TGATTGAAAGATGATGTGAA+GGG | + | chr1_2:5092470-5092489 | Msa0051040:intron | 30.0% | |
!!! | AGCATCAGCAATTTATTTTG+GGG | - | chr1_2:5092508-5092527 | None:intergenic | 30.0% |
! | CAAGCATCAGCAATTTATTT+TGG | - | chr1_2:5092510-5092529 | None:intergenic | 30.0% |
CTACTGTGTAGATTTGTAAA+AGG | + | chr1_2:5092584-5092603 | Msa0051040:intron | 30.0% | |
GATAAGATGATCTTCTGCTT+AGG | - | chr1_2:5078159-5078178 | None:intergenic | 35.0% | |
ATATGTATGAAGCACAGACA+CGG | + | chr1_2:5078380-5078399 | Msa0051040:intron | 35.0% | |
TTTCTTAGGTGAATCAGCAT+AGG | - | chr1_2:5078570-5078589 | None:intergenic | 35.0% | |
GTGGAACCAAACATACATTT+AGG | - | chr1_2:5078856-5078875 | None:intergenic | 35.0% | |
AAATATGGTTTCTCCAAACG+TGG | - | chr1_2:5078875-5078894 | None:intergenic | 35.0% | |
AAATTCATCCCTGACTTTGT+CGG | + | chr1_2:5078967-5078986 | Msa0051040:intron | 35.0% | |
TTTAGTCTCTAGCATACTCT+CGG | - | chr1_2:5079074-5079093 | None:intergenic | 35.0% | |
CACAGTAAGTGGTTAAGTAT+AGG | + | chr1_2:5079163-5079182 | Msa0051040:intron | 35.0% | |
TGAAATAGTCGTAATCTCAG+GGG | + | chr1_2:5079223-5079242 | Msa0051040:intron | 35.0% | |
!! | GTTGGATCTTGAACTGATTT+TGG | + | chr1_2:5079346-5079365 | Msa0051040:intron | 35.0% |
!!! | CGAGTTTTGAAGTATTCTAC+GGG | + | chr1_2:5079850-5079869 | Msa0051040:CDS | 35.0% |
! | CTTGATTTTGTAGTTTCCGT+GGG | + | chr1_2:5079926-5079945 | Msa0051040:intron | 35.0% |
AGATCATAAGATGAAACCCA+CGG | - | chr1_2:5079945-5079964 | None:intergenic | 35.0% | |
!!! | CTTAGCTTGTATAGTTTTGC+AGG | - | chr1_2:5080103-5080122 | None:intergenic | 35.0% |
CTGCAAAACTATACAAGCTA+AGG | + | chr1_2:5080101-5080120 | Msa0051040:CDS | 35.0% | |
!! | GTTTTAACAAACGATCCTAG+TGG | + | chr1_2:5080142-5080161 | Msa0051040:CDS | 35.0% |
AGTGTAAATGTACATCCACT+AGG | - | chr1_2:5080160-5080179 | None:intergenic | 35.0% | |
! | TAGTGGATGTACATTTACAC+TGG | + | chr1_2:5080159-5080178 | Msa0051040:CDS | 35.0% |
TACACAATGTTCTCAGTTTC+TGG | + | chr1_2:5080219-5080238 | Msa0051040:intron | 35.0% | |
AAGAAACGACCATCAAAGTA+GGG | - | chr1_2:5080273-5080292 | None:intergenic | 35.0% | |
TAAGAAACGACCATCAAAGT+AGG | - | chr1_2:5080274-5080293 | None:intergenic | 35.0% | |
CAAGAAGCAAATGATTAGGA+AGG | - | chr1_2:5080300-5080319 | None:intergenic | 35.0% | |
GATGAATGCATATGTCTTGT+AGG | + | chr1_2:5080324-5080343 | Msa0051040:intron | 35.0% | |
!! | GACCATCTCTAAAGATGTTT+TGG | + | chr1_2:5080545-5080564 | Msa0051040:CDS | 35.0% |
! | ACCCAAAACATCTTTAGAGA+TGG | - | chr1_2:5080550-5080569 | None:intergenic | 35.0% |
TCTTTACAATCAAATAGCCG+TGG | + | chr1_2:5080660-5080679 | Msa0051040:intron | 35.0% | |
! | AAGAGAGATAACATGATGGA+AGG | + | chr1_2:5080841-5080860 | Msa0051040:intron | 35.0% |
TTTGAATGGGAGATAAGAAG+GGG | - | chr1_2:5081004-5081023 | None:intergenic | 35.0% | |
GTTTGAATGGGAGATAAGAA+GGG | - | chr1_2:5081005-5081024 | None:intergenic | 35.0% | |
TGTTTGAATGGGAGATAAGA+AGG | - | chr1_2:5081006-5081025 | None:intergenic | 35.0% | |
! | CATTTTGAACTTCACATCAG+TGG | + | chr1_2:5081072-5081091 | Msa0051040:intron | 35.0% |
! | GACAATTTTTGTGGAATGGA+GGG | - | chr1_2:5081117-5081136 | None:intergenic | 35.0% |
! | TGACAATTTTTGTGGAATGG+AGG | - | chr1_2:5081118-5081137 | None:intergenic | 35.0% |
TCGATATCATAAATGCTCAG+TGG | + | chr1_2:5081237-5081256 | Msa0051040:intron | 35.0% | |
! | ATTACTCTGAGTTGAAACAG+GGG | - | chr1_2:5081450-5081469 | None:intergenic | 35.0% |
! | CATTACTCTGAGTTGAAACA+GGG | - | chr1_2:5081451-5081470 | None:intergenic | 35.0% |
! | ACATTACTCTGAGTTGAAAC+AGG | - | chr1_2:5081452-5081471 | None:intergenic | 35.0% |
ACTCAGAGTAATGTGAAAGA+TGG | + | chr1_2:5081458-5081477 | Msa0051040:CDS | 35.0% | |
CATGAATATGTGCCCAATAA+GGG | - | chr1_2:5081822-5081841 | None:intergenic | 35.0% | |
ACATGAATATGTGCCCAATA+AGG | - | chr1_2:5081823-5081842 | None:intergenic | 35.0% | |
TATTGGGCACATATTCATGT+AGG | + | chr1_2:5081823-5081842 | Msa0051040:intron | 35.0% | |
TATTCATGTAGGACACTTAC+AGG | + | chr1_2:5081834-5081853 | Msa0051040:intron | 35.0% | |
ATTCATGTAGGACACTTACA+GGG | + | chr1_2:5081835-5081854 | Msa0051040:intron | 35.0% | |
GTCCCTACCTTCTATAAAAA+TGG | + | chr1_2:5082102-5082121 | Msa0051040:intron | 35.0% | |
!! | CACCCATTTTTATAGAAGGT+AGG | - | chr1_2:5082108-5082127 | None:intergenic | 35.0% |
CTACCTTCTATAAAAATGGG+TGG | + | chr1_2:5082106-5082125 | Msa0051040:intron | 35.0% | |
!! | TGACCACCCATTTTTATAGA+AGG | - | chr1_2:5082112-5082131 | None:intergenic | 35.0% |
TCCTTTCAATTACCTTAGCT+AGG | + | chr1_2:5082243-5082262 | Msa0051040:intron | 35.0% | |
ACCTAGCTAAGGTAATTGAA+AGG | - | chr1_2:5082247-5082266 | None:intergenic | 35.0% | |
! | TGTCGTAAAGTTTTCTTGTG+GGG | - | chr1_2:5082701-5082720 | None:intergenic | 35.0% |
! | GTGTCGTAAAGTTTTCTTGT+GGG | - | chr1_2:5082702-5082721 | None:intergenic | 35.0% |
! | AAATTTTCTGGATTCATCCC+TGG | + | chr1_2:5082959-5082978 | Msa0051040:intron | 35.0% |
ACAGAAAATGCTGAACGTAA+TGG | + | chr1_2:5083021-5083040 | Msa0051040:intron | 35.0% | |
! | TAAAGGCTCGCTTTCTAAAA+TGG | - | chr1_2:5083252-5083271 | None:intergenic | 35.0% |
AAGCGAGCCTTTAATAAATG+AGG | + | chr1_2:5083259-5083278 | Msa0051040:CDS | 35.0% | |
TTCAAGATGAAAAGAATCCG+TGG | + | chr1_2:5083500-5083519 | Msa0051040:intron | 35.0% | |
!! | TCTAGCTTTAGTTTGATCCA+CGG | - | chr1_2:5083520-5083539 | None:intergenic | 35.0% |
GTATAATAGGGTGAACAAAC+AGG | + | chr1_2:5083580-5083599 | Msa0051040:intron | 35.0% | |
TGGTTTATTGGACGAAATGT+TGG | + | chr1_2:5083739-5083758 | Msa0051040:intron | 35.0% | |
TTATTGGACGAAATGTTGGA+TGG | + | chr1_2:5083743-5083762 | Msa0051040:intron | 35.0% | |
GCAAATGCGACAATTATCAT+GGG | - | chr1_2:5083834-5083853 | None:intergenic | 35.0% | |
TGCAAATGCGACAATTATCA+TGG | - | chr1_2:5083835-5083854 | None:intergenic | 35.0% | |
ACTAGACAATACAATTGAGG+GGG | - | chr1_2:5083918-5083937 | None:intergenic | 35.0% | |
GACAAATGGAAGAAAGTGAA+TGG | - | chr1_2:5084038-5084057 | None:intergenic | 35.0% | |
GTCAAATGTGACAGTTATTG+AGG | + | chr1_2:5084083-5084102 | Msa0051040:intron | 35.0% | |
TTGTAGACGATATGGATGAA+TGG | + | chr1_2:5084399-5084418 | Msa0051040:CDS | 35.0% | |
GCACATTCAATGTTAAACTC+CGG | + | chr1_2:5084426-5084445 | Msa0051040:CDS | 35.0% | |
CTTGTATCCTTCTTCAATCA+AGG | + | chr1_2:5084480-5084499 | Msa0051040:intron | 35.0% | |
AATACAGCCTTGATTGAAGA+AGG | - | chr1_2:5084490-5084509 | None:intergenic | 35.0% | |
!!! | TCAAGGCTGTATTTTTTCCT+TGG | + | chr1_2:5084497-5084516 | Msa0051040:intron | 35.0% |
ACAAACACAAAGTTGTACCA+AGG | - | chr1_2:5084517-5084536 | None:intergenic | 35.0% | |
GGAATAGCTACACATTTGTT+TGG | + | chr1_2:5084553-5084572 | Msa0051040:intron | 35.0% | |
GTTTCTTTGTTCCTTTGTTC+AGG | + | chr1_2:5084575-5084594 | Msa0051040:intron | 35.0% | |
AGCATCAATAGAAATGAGGT+TGG | - | chr1_2:5084656-5084675 | None:intergenic | 35.0% | |
! | TCCTGATATTTCTGTTTGCT+TGG | + | chr1_2:5084779-5084798 | Msa0051040:intron | 35.0% |
TCCAAGCAAACAGAAATATC+AGG | - | chr1_2:5084783-5084802 | None:intergenic | 35.0% | |
CTGAAAGAAAGAATCTCTAG+TGG | + | chr1_2:5084842-5084861 | Msa0051040:intron | 35.0% | |
! | AAAGAATCTCTAGTGGATCT+TGG | + | chr1_2:5084849-5084868 | Msa0051040:intron | 35.0% |
! | AAGAATCTCTAGTGGATCTT+GGG | + | chr1_2:5084850-5084869 | Msa0051040:intron | 35.0% |
TTATTTGTATGAGGGGTTAG+CGG | + | chr1_2:5084898-5084917 | Msa0051040:intron | 35.0% | |
ACATCATCTCTTATCCTCTT+TGG | + | chr1_2:5085064-5085083 | Msa0051040:intron | 35.0% | |
! | TAAAACAGCATAATGGAAGG+TGG | - | chr1_2:5085226-5085245 | None:intergenic | 35.0% |
TGTTATTACGGGTTTCTATC+TGG | - | chr1_2:5085555-5085574 | None:intergenic | 35.0% | |
CATTTGCAAGCTGTTATTAC+GGG | - | chr1_2:5085566-5085585 | None:intergenic | 35.0% | |
GCATTTGCAAGCTGTTATTA+CGG | - | chr1_2:5085567-5085586 | None:intergenic | 35.0% | |
TAACAGCTTGCAAATGCAAT+CGG | + | chr1_2:5085570-5085589 | Msa0051040:CDS | 35.0% | |
GAGGTTCATTTGATGAAGAT+CGG | + | chr1_2:5085764-5085783 | Msa0051040:CDS | 35.0% | |
GCATAAGTGAGGTCAATATT+GGG | - | chr1_2:5085850-5085869 | None:intergenic | 35.0% | |
ATATAATGTAACTGACCTCC+CGG | - | chr1_2:5086541-5086560 | None:intergenic | 35.0% | |
ACCTTATTACATGTGAGTTC+TGG | + | chr1_2:5086643-5086662 | Msa0051040:intron | 35.0% | |
CCTTATTACATGTGAGTTCT+GGG | + | chr1_2:5086644-5086663 | Msa0051040:intron | 35.0% | |
! | TAGATGCTTTTGTACTAGCA+CGG | - | chr1_2:5086763-5086782 | None:intergenic | 35.0% |
CATCTAGAAATCCAACTGTT+TGG | + | chr1_2:5086777-5086796 | Msa0051040:CDS | 35.0% | |
! | CACAATTTTTATCCCACTTC+TGG | + | chr1_2:5086877-5086896 | Msa0051040:CDS | 35.0% |
! | AATTTTTATCCCACTTCTGG+TGG | + | chr1_2:5086880-5086899 | Msa0051040:CDS | 35.0% |
GATGAGAATGACAGTAAATC+TGG | + | chr1_2:5087108-5087127 | Msa0051040:intron | 35.0% | |
!!! | GCCTGACTTTTTTCAAATAG+CGG | + | chr1_2:5087138-5087157 | Msa0051040:intron | 35.0% |
!!! | CTTTTTTCAAATAGCGGCTT+TGG | + | chr1_2:5087144-5087163 | Msa0051040:intron | 35.0% |
TGAGATCCAAATAAAGTGGT+GGG | - | chr1_2:5087258-5087277 | None:intergenic | 35.0% | |
ATGAGATCCAAATAAAGTGG+TGG | - | chr1_2:5087259-5087278 | None:intergenic | 35.0% | |
CATTACATAGAACAGATTGG+AGG | - | chr1_2:5087462-5087481 | None:intergenic | 35.0% | |
GTGCATTACATAGAACAGAT+TGG | - | chr1_2:5087465-5087484 | None:intergenic | 35.0% | |
CTGTTCTATGTAATGCACAT+AGG | + | chr1_2:5087467-5087486 | Msa0051040:intron | 35.0% | |
AATGCACATAGGCATTCTTT+AGG | + | chr1_2:5087478-5087497 | Msa0051040:intron | 35.0% | |
GATGATAGTCCAATAGTTAG+AGG | + | chr1_2:5087567-5087586 | Msa0051040:intron | 35.0% | |
CTTCTTCTACCTCTAACTAT+TGG | - | chr1_2:5087579-5087598 | None:intergenic | 35.0% | |
ACTGTACGTATTGGATCAAA+TGG | - | chr1_2:5087668-5087687 | None:intergenic | 35.0% | |
! | AACAACTAGAACCTTTTAGG+TGG | - | chr1_2:5087696-5087715 | None:intergenic | 35.0% |
! | TGCAACAACTAGAACCTTTT+AGG | - | chr1_2:5087699-5087718 | None:intergenic | 35.0% |
! | GACCATTTCTTCCATTTTGT+AGG | + | chr1_2:5087760-5087779 | Msa0051040:intron | 35.0% |
TGAATCACTTCAGGATTTAC+TGG | + | chr1_2:5087813-5087832 | Msa0051040:CDS | 35.0% | |
!! | TGTGTGATTTCTTTTTCGTG+TGG | + | chr1_2:5088041-5088060 | Msa0051040:intron | 35.0% |
!! | GTGTGATTTCTTTTTCGTGT+GGG | + | chr1_2:5088042-5088061 | Msa0051040:intron | 35.0% |
!! | TGTGATTTCTTTTTCGTGTG+GGG | + | chr1_2:5088043-5088062 | Msa0051040:intron | 35.0% |
!!! | TTTTGGGATTAAGACTGACA+AGG | - | chr1_2:5088266-5088285 | None:intergenic | 35.0% |
CATAAACTACCATGGTAAAG+AGG | + | chr1_2:5088425-5088444 | Msa0051040:intron | 35.0% | |
AATTGATACCCATCACTAAG+GGG | - | chr1_2:5088564-5088583 | None:intergenic | 35.0% | |
GAAATTGATACCCATCACTA+AGG | - | chr1_2:5088566-5088585 | None:intergenic | 35.0% | |
TTCATGTATTTGCACACTTC+TGG | + | chr1_2:5088583-5088602 | Msa0051040:intron | 35.0% | |
TTATGTCGCAACTTTGTAGA+GGG | + | chr1_2:5088606-5088625 | Msa0051040:intron | 35.0% | |
CAAAAAGACATAGGATAGCA+AGG | + | chr1_2:5088660-5088679 | Msa0051040:intron | 35.0% | |
!! | CAATAATGTTGGCCTTTGAA+AGG | - | chr1_2:5088784-5088803 | None:intergenic | 35.0% |
CTTTCAAAGGCCAACATTAT+TGG | + | chr1_2:5088782-5088801 | Msa0051040:intron | 35.0% | |
!! | CATCCTAATTCTTTGGAGTT+TGG | - | chr1_2:5089319-5089338 | None:intergenic | 35.0% |
ATGAATACAAGATGGAGTTG+GGG | - | chr1_2:5089450-5089469 | None:intergenic | 35.0% | |
! | TTTTGCAAATTGCACTGAGT+TGG | + | chr1_2:5089511-5089530 | Msa0051040:intron | 35.0% |
ACAGCCATAACAACATGAAA+TGG | + | chr1_2:5089709-5089728 | Msa0051040:intron | 35.0% | |
AAATTTGTGTTCCTCTGCTT+TGG | + | chr1_2:5089849-5089868 | Msa0051040:intron | 35.0% | |
! | GATTTTTATCCTCTCCGTTT+TGG | - | chr1_2:5090583-5090602 | None:intergenic | 35.0% |
AATCATTGATCTCTCTTCCA+AGG | + | chr1_2:5090599-5090618 | Msa0051040:intron | 35.0% | |
ATCATTGATCTCTCTTCCAA+GGG | + | chr1_2:5090600-5090619 | Msa0051040:intron | 35.0% | |
ACAAGAATTGAGAGAATCGA+GGG | - | chr1_2:5090672-5090691 | None:intergenic | 35.0% | |
TACAAGAATTGAGAGAATCG+AGG | - | chr1_2:5090673-5090692 | None:intergenic | 35.0% | |
TACATCCTAACAGTTACTGT+GGG | + | chr1_2:5090751-5090770 | Msa0051040:intron | 35.0% | |
AAACACTTGCCTATTCTGAA+AGG | - | chr1_2:5090982-5091001 | None:intergenic | 35.0% | |
TGATAAAACTTGGCCAAAGT+GGG | - | chr1_2:5091137-5091156 | None:intergenic | 35.0% | |
ATGATAAAACTTGGCCAAAG+TGG | - | chr1_2:5091138-5091157 | None:intergenic | 35.0% | |
!! | TTTGGCCAAGTTTTATCATC+AGG | + | chr1_2:5091139-5091158 | Msa0051040:CDS | 35.0% |
! | ATCTTTTTCTCAACCAACAC+TGG | + | chr1_2:5091245-5091264 | Msa0051040:intron | 35.0% |
!!! | CACTTTTTTTTTCCTTCCCT+TGG | + | chr1_2:5091299-5091318 | Msa0051040:intron | 35.0% |
ACGTTCAAATTGCTTTCCAA+GGG | - | chr1_2:5091318-5091337 | None:intergenic | 35.0% | |
AGAGGCTATGAAGGATTAAA+AGG | - | chr1_2:5091418-5091437 | None:intergenic | 35.0% | |
! | TTTTAATCCTTCATAGCCTC+TGG | + | chr1_2:5091417-5091436 | Msa0051040:intron | 35.0% |
GTTAAAAACCAGCTTATCTG+GGG | + | chr1_2:5091783-5091802 | Msa0051040:CDS | 35.0% | |
AAGAACTGTTACCTTCCTTA+TGG | + | chr1_2:5091945-5091964 | Msa0051040:CDS | 35.0% | |
AGAACTGTTACCTTCCTTAT+GGG | + | chr1_2:5091946-5091965 | Msa0051040:CDS | 35.0% | |
ATTGGAAAGGCCTTCAATAT+TGG | - | chr1_2:5092371-5092390 | None:intergenic | 35.0% | |
! | TTTTGTTGGGAAAGAAAAGG+AGG | + | chr1_2:5092418-5092437 | Msa0051040:intron | 35.0% |
! | TCTTTTACAAGTTGCTTAGG+TGG | + | chr1_2:5092539-5092558 | Msa0051040:intron | 35.0% |
GTTGGGAAACGCTTAATTAT+AGG | + | chr1_2:5092628-5092647 | Msa0051040:intron | 35.0% | |
CAGATGTGAATGTCTCATTA+GGG | - | chr1_2:5092831-5092850 | None:intergenic | 35.0% | |
ACAGATGTGAATGTCTCATT+AGG | - | chr1_2:5092832-5092851 | None:intergenic | 35.0% | |
ATCGGAGAAACAACAAACTC+CGG | + | chr1_2:5078066-5078085 | Msa0051040:five_prime_UTR | 40.0% | |
ATCCGTGTTTCCAAAAGTCA+CGG | + | chr1_2:5078180-5078199 | Msa0051040:CDS | 40.0% | |
TTATTACATGTGTCGGACAC+CGG | + | chr1_2:5078460-5078479 | Msa0051040:intron | 40.0% | |
! | CTTCTGATCAAAAGCACATC+CGG | - | chr1_2:5078482-5078501 | None:intergenic | 40.0% |
! | TGTATGTTTGGTTCCACGTT+TGG | + | chr1_2:5078859-5078878 | Msa0051040:intron | 40.0% |
GACAAAGTCAGGGATGAATT+TGG | - | chr1_2:5078968-5078987 | None:intergenic | 40.0% | |
AATTCATCCCTGACTTTGTC+GGG | + | chr1_2:5078968-5078987 | Msa0051040:intron | 40.0% | |
GATCTGATTGACACAGTAAG+TGG | + | chr1_2:5079152-5079171 | Msa0051040:intron | 40.0% | |
TGTCCCTTTGTTAATGCTGT+AGG | - | chr1_2:5079811-5079830 | None:intergenic | 40.0% | |
!!! | GTTTTGAAGTATTCTACGGG+AGG | + | chr1_2:5079853-5079872 | Msa0051040:CDS | 40.0% |
! | GCTTGATTTTGTAGTTTCCG+TGG | + | chr1_2:5079925-5079944 | Msa0051040:intron | 40.0% |
TCACTAGCTACTCTAAGCAT+TGG | - | chr1_2:5079987-5080006 | None:intergenic | 40.0% | |
TAACCTTAGAAGCCAAAGTG+TGG | + | chr1_2:5080354-5080373 | Msa0051040:CDS | 40.0% | |
ATATTTCGCATCGTCCATTG+CGG | - | chr1_2:5080385-5080404 | None:intergenic | 40.0% | |
! | CGATGCGAAATATTGATGAC+AGG | + | chr1_2:5080392-5080411 | Msa0051040:CDS | 40.0% |
! | TGATGACAGGTATTGTTGAG+AGG | + | chr1_2:5080405-5080424 | Msa0051040:intron | 40.0% |
AGATGGTCAAGATGCAAAGA+AGG | - | chr1_2:5080533-5080552 | None:intergenic | 40.0% | |
ACATCTATACCAACGACCTT+AGG | - | chr1_2:5080579-5080598 | None:intergenic | 40.0% | |
TGGTATAGATGTTGTGGAGT+TGG | + | chr1_2:5080587-5080606 | Msa0051040:CDS | 40.0% | |
CTTACTATGCATGGAACCTT+TGG | + | chr1_2:5080730-5080749 | Msa0051040:intron | 40.0% | |
ATAAGACTGTGACACTCCAA+AGG | - | chr1_2:5080749-5080768 | None:intergenic | 40.0% | |
AGGGAAGAGAGATAACATGA+TGG | + | chr1_2:5080837-5080856 | Msa0051040:intron | 40.0% | |
! | AGAGATAACATGATGGAAGG+AGG | + | chr1_2:5080844-5080863 | Msa0051040:intron | 40.0% |
TTGAATGGGAGATAAGAAGG+GGG | - | chr1_2:5081003-5081022 | None:intergenic | 40.0% | |
CATCAGTGGTTAAATGCCAT+TGG | + | chr1_2:5081086-5081105 | Msa0051040:intron | 40.0% | |
TATTGTGTGTATCACTCCGA+AGG | - | chr1_2:5081272-5081291 | None:intergenic | 40.0% | |
CAGAGTAATGTGAAAGATGG+TGG | + | chr1_2:5081461-5081480 | Msa0051040:CDS | 40.0% | |
CCTGTGTCCCTAGAATTTAA+AGG | - | chr1_2:5081702-5081721 | None:intergenic | 40.0% | |
! | CCTTTAAATTCTAGGGACAC+AGG | + | chr1_2:5081699-5081718 | Msa0051040:intron | 40.0% |
TTCATGTAGGACACTTACAG+GGG | + | chr1_2:5081836-5081855 | Msa0051040:intron | 40.0% | |
GGCGGATGATAATTATGACA+GGG | + | chr1_2:5081857-5081876 | Msa0051040:intron | 40.0% | |
GCGGATGATAATTATGACAG+GGG | + | chr1_2:5081858-5081877 | Msa0051040:intron | 40.0% | |
CGGATGATAATTATGACAGG+GGG | + | chr1_2:5081859-5081878 | Msa0051040:intron | 40.0% | |
!! | GTGTTTCCCATTAGTCTTGT+GGG | - | chr1_2:5082435-5082454 | None:intergenic | 40.0% |
!! | AGTGTTTCCCATTAGTCTTG+TGG | - | chr1_2:5082436-5082455 | None:intergenic | 40.0% |
AGATATGAGCACGACACAAA+GGG | - | chr1_2:5082640-5082659 | None:intergenic | 40.0% | |
TAGATATGAGCACGACACAA+AGG | - | chr1_2:5082641-5082660 | None:intergenic | 40.0% | |
GTCGTGCTCATATCTAAAGA+TGG | + | chr1_2:5082645-5082664 | Msa0051040:intron | 40.0% | |
TAAAGATGGATCTATGTGCC+AGG | + | chr1_2:5082659-5082678 | Msa0051040:intron | 40.0% | |
!! | GGTGTCGTAAAGTTTTCTTG+TGG | - | chr1_2:5082703-5082722 | None:intergenic | 40.0% |
TCTAATGTGCAGGTATGTCA+TGG | + | chr1_2:5083151-5083170 | Msa0051040:intron | 40.0% | |
CTAATGTGCAGGTATGTCAT+GGG | + | chr1_2:5083152-5083171 | Msa0051040:intron | 40.0% | |
GACAATTATCATGGGACAGA+GGG | - | chr1_2:5083826-5083845 | None:intergenic | 40.0% | |
TGACAGTTATTGAGGGACAA+AGG | + | chr1_2:5084091-5084110 | Msa0051040:intron | 40.0% | |
GACAGTTATTGAGGGACAAA+GGG | + | chr1_2:5084092-5084111 | Msa0051040:intron | 40.0% | |
GACGATATGGATGAATGGTT+AGG | + | chr1_2:5084404-5084423 | Msa0051040:CDS | 40.0% | |
CATGAGAGAGGATATAGCAT+CGG | + | chr1_2:5084451-5084470 | Msa0051040:CDS | 40.0% | |
!! | AGAGGATATAGCATCGGTAA+GGG | + | chr1_2:5084457-5084476 | Msa0051040:intron | 40.0% |
TTTGTTCCTTTGTTCAGGCA+AGG | + | chr1_2:5084580-5084599 | Msa0051040:intron | 40.0% | |
GGGTAGCATCAATAGAAATG+AGG | - | chr1_2:5084660-5084679 | None:intergenic | 40.0% | |
!! | TTAGCGGAAAAGTATTCAGC+TGG | + | chr1_2:5084914-5084933 | Msa0051040:intron | 40.0% |
TATACCAAAATGCCCTGATG+AGG | - | chr1_2:5085104-5085123 | None:intergenic | 40.0% | |
!! | AGGGCATTTTGGTATAGAGA+GGG | + | chr1_2:5085108-5085127 | Msa0051040:intron | 40.0% |
TTTGGTATAGAGAGGGATTG+TGG | + | chr1_2:5085115-5085134 | Msa0051040:intron | 40.0% | |
TTGGTATAGAGAGGGATTGT+GGG | + | chr1_2:5085116-5085135 | Msa0051040:intron | 40.0% | |
! | TCTGGTGTGTGAATTAGTCT+TGG | + | chr1_2:5085182-5085201 | Msa0051040:intron | 40.0% |
!! | CTGGTGTGTGAATTAGTCTT+GGG | + | chr1_2:5085183-5085202 | Msa0051040:intron | 40.0% |
!! | TGGTGTGTGAATTAGTCTTG+GGG | + | chr1_2:5085184-5085203 | Msa0051040:intron | 40.0% |
!!! | AAGCAACCATTTTTTGGTGC+TGG | + | chr1_2:5085385-5085404 | Msa0051040:intron | 40.0% |
!!! | AGCAACCATTTTTTGGTGCT+GGG | + | chr1_2:5085386-5085405 | Msa0051040:intron | 40.0% |
AGCTTGATAAGCTTCTTGAG+CGG | + | chr1_2:5085617-5085636 | Msa0051040:CDS | 40.0% | |
TTTAGCTGGATGAACTTACC+TGG | + | chr1_2:5085688-5085707 | Msa0051040:intron | 40.0% | |
! | TAGTTTGCAACGTGTTTGAC+AGG | + | chr1_2:5085742-5085761 | Msa0051040:intron | 40.0% |
CGCATAAGTGAGGTCAATAT+TGG | - | chr1_2:5085851-5085870 | None:intergenic | 40.0% | |
TGTCTGCTTACTCTAAACAG+CGG | + | chr1_2:5086275-5086294 | Msa0051040:intron | 40.0% | |
ACGTCTTCTTCAGCATTTGA+AGG | + | chr1_2:5086354-5086373 | Msa0051040:CDS | 40.0% | |
CATACGCATGCAGGAATAAT+AGG | - | chr1_2:5086394-5086413 | None:intergenic | 40.0% | |
! | TTCCTGCATGCGTATGTTTT+TGG | + | chr1_2:5086398-5086417 | Msa0051040:intron | 40.0% |
AGCCTTGACAAGAATTGCTT+GGG | + | chr1_2:5086470-5086489 | Msa0051040:CDS | 40.0% | |
! | CTGCAATAAGCTTTTCTCAG+TGG | - | chr1_2:5086497-5086516 | None:intergenic | 40.0% |
CCCAGAACTCACATGTAATA+AGG | - | chr1_2:5086647-5086666 | None:intergenic | 40.0% | |
!! | AATCCAACTGTTTGGCTTGA+AGG | + | chr1_2:5086785-5086804 | Msa0051040:CDS | 40.0% |
GCCGCTATTTGAAAAAAGTC+AGG | - | chr1_2:5087142-5087161 | None:intergenic | 40.0% | |
TGGATCTCATTTCCAATGTG+TGG | + | chr1_2:5087269-5087288 | Msa0051040:intron | 40.0% | |
GGATCTCATTTCCAATGTGT+GGG | + | chr1_2:5087270-5087289 | Msa0051040:intron | 40.0% | |
!! | CACCTATAGAAGCACTGTTA+AGG | + | chr1_2:5087530-5087549 | Msa0051040:intron | 40.0% |
CTCCTTAACAGTGCTTCTAT+AGG | - | chr1_2:5087535-5087554 | None:intergenic | 40.0% | |
!! | CTATAGAAGCACTGTTAAGG+AGG | + | chr1_2:5087533-5087552 | Msa0051040:intron | 40.0% |
! | TACAGTTGACTCCACCTAAA+AGG | + | chr1_2:5087682-5087701 | Msa0051040:intron | 40.0% |
TCACTTCAGGATTTACTGGA+CGG | + | chr1_2:5087817-5087836 | Msa0051040:CDS | 40.0% | |
! | AGATGAGAGGGTTTGGATTT+TGG | + | chr1_2:5087905-5087924 | Msa0051040:intron | 40.0% |
!! | GTGATTTCTTTTTCGTGTGG+GGG | + | chr1_2:5088044-5088063 | Msa0051040:intron | 40.0% |
!! | TGATTTCTTTTTCGTGTGGG+GGG | + | chr1_2:5088045-5088064 | Msa0051040:intron | 40.0% |
CAGAGTAAATCTCTGACTGT+TGG | + | chr1_2:5088214-5088233 | Msa0051040:intron | 40.0% | |
AAGACTGACAAGGCTAAAAG+TGG | - | chr1_2:5088256-5088275 | None:intergenic | 40.0% | |
GAATGACTTCTTGGAACCAA+AGG | - | chr1_2:5088335-5088354 | None:intergenic | 40.0% | |
!! | TCATAATGGACTGGTTAAGG+GGG | - | chr1_2:5088377-5088396 | None:intergenic | 40.0% |
!! | CTCATAATGGACTGGTTAAG+GGG | - | chr1_2:5088378-5088397 | None:intergenic | 40.0% |
!! | GCTCATAATGGACTGGTTAA+GGG | - | chr1_2:5088379-5088398 | None:intergenic | 40.0% |
!! | TGCTCATAATGGACTGGTTA+AGG | - | chr1_2:5088380-5088399 | None:intergenic | 40.0% |
AGTTTATGTTCTTAGTCGCC+TGG | - | chr1_2:5088413-5088432 | None:intergenic | 40.0% | |
GTACACTTGGGTATCATTAC+AGG | - | chr1_2:5088491-5088510 | None:intergenic | 40.0% | |
GTTATGTCGCAACTTTGTAG+AGG | + | chr1_2:5088605-5088624 | Msa0051040:intron | 40.0% | |
! | ACTTTTATGCTGTCGTGGAT+TGG | + | chr1_2:5088936-5088955 | Msa0051040:CDS | 40.0% |
! | CTTTTATGCTGTCGTGGATT+GGG | + | chr1_2:5088937-5088956 | Msa0051040:CDS | 40.0% |
! | TGCATTGATATGCAGCGTAA+AGG | - | chr1_2:5088977-5088996 | None:intergenic | 40.0% |
TTACGCTGCATATCAATGCA+TGG | + | chr1_2:5088977-5088996 | Msa0051040:CDS | 40.0% | |
! | GGATTTGTACGTCTTTTGCT+TGG | + | chr1_2:5089043-5089062 | Msa0051040:CDS | 40.0% |
TGTAGGATAGAACACCCATT+TGG | - | chr1_2:5089253-5089272 | None:intergenic | 40.0% | |
TCCTACATTCCCAGGTAAAA+TGG | + | chr1_2:5089266-5089285 | Msa0051040:intron | 40.0% | |
! | TCCATTTTACCTGGGAATGT+AGG | - | chr1_2:5089270-5089289 | None:intergenic | 40.0% |
TCGCCAAACTCCAAAGAATT+AGG | + | chr1_2:5089313-5089332 | Msa0051040:intron | 40.0% | |
TGACATAGTTGCTGATGTTG+TGG | + | chr1_2:5089680-5089699 | Msa0051040:intron | 40.0% | |
TTAACACATGACTGCATGCA+AGG | - | chr1_2:5089751-5089770 | None:intergenic | 40.0% | |
AGAAACCATTTCCAAAGCAG+AGG | - | chr1_2:5089863-5089882 | None:intergenic | 40.0% | |
TAGAGTAAACAGGAAACCCT+TGG | - | chr1_2:5090619-5090638 | None:intergenic | 40.0% | |
CTACATCCTAACAGTTACTG+TGG | + | chr1_2:5090750-5090769 | Msa0051040:intron | 40.0% | |
TTATCTGCATTCCAAACAGG+TGG | + | chr1_2:5090805-5090824 | Msa0051040:intron | 40.0% | |
TAGCGTAATGTTTGCAACCT+TGG | + | chr1_2:5090896-5090915 | Msa0051040:CDS | 40.0% | |
ACTATGCTGCCTTTCAGAAT+AGG | + | chr1_2:5090970-5090989 | Msa0051040:CDS | 40.0% | |
CAATAACTGAAACAGCCTCT+TGG | - | chr1_2:5091019-5091038 | None:intergenic | 40.0% | |
! | ACTGGCCTGATGATAAAACT+TGG | - | chr1_2:5091147-5091166 | None:intergenic | 40.0% |
AGGGATATGAATTCCAGTGT+TGG | - | chr1_2:5091261-5091280 | None:intergenic | 40.0% | |
ACACTGGAATTCATATCCCT+TGG | + | chr1_2:5091261-5091280 | Msa0051040:intron | 40.0% | |
CACTGGAATTCATATCCCTT+GGG | + | chr1_2:5091262-5091281 | Msa0051040:intron | 40.0% | |
TCAAATTGCTTTCCAAGGGA+AGG | - | chr1_2:5091314-5091333 | None:intergenic | 40.0% | |
GACGTTCAAATTGCTTTCCA+AGG | - | chr1_2:5091319-5091338 | None:intergenic | 40.0% | |
TTTCAGATACCTTTCCAGCT+TGG | + | chr1_2:5091733-5091752 | Msa0051040:intron | 40.0% | |
TTCAGATACCTTTCCAGCTT+GGG | + | chr1_2:5091734-5091753 | Msa0051040:intron | 40.0% | |
TTGCATTTGTCCCATAAGGA+AGG | - | chr1_2:5091959-5091978 | None:intergenic | 40.0% | |
TTCCTTATGGGACAAATGCA+AGG | + | chr1_2:5091958-5091977 | Msa0051040:CDS | 40.0% | |
TACCTTGCATTTGTCCCATA+AGG | - | chr1_2:5091963-5091982 | None:intergenic | 40.0% | |
GGTATCTTAGTTGGCCAATA+AGG | - | chr1_2:5091999-5092018 | None:intergenic | 40.0% | |
CTTGGAAGACACTTCAGATT+TGG | - | chr1_2:5092049-5092068 | None:intergenic | 40.0% | |
TAGTGAGGCTCCAATATTGA+AGG | + | chr1_2:5092358-5092377 | Msa0051040:intron | 40.0% | |
AGGCCTTTCCAATGTGAAAA+TGG | + | chr1_2:5092378-5092397 | Msa0051040:intron | 40.0% | |
! | CGAAAGTTTTGCTCAACTTG+TGG | + | chr1_2:5092795-5092814 | Msa0051040:CDS | 40.0% |
AACAACAAACTCCGGCGAAA+TGG | + | chr1_2:5078074-5078093 | Msa0051040:exon | 45.0% | |
AGTAGATTTCGCCATTTCGC+CGG | - | chr1_2:5078088-5078107 | None:intergenic | 45.0% | |
!! | TGCCGTGACTTTTGGAAACA+CGG | - | chr1_2:5078185-5078204 | None:intergenic | 45.0% |
TCCAAAAGTCACGGCATCTT+AGG | + | chr1_2:5078189-5078208 | Msa0051040:CDS | 45.0% | |
! | TCCTAAGATGCCGTGACTTT+TGG | - | chr1_2:5078193-5078212 | None:intergenic | 45.0% |
CATGTGACGACTAGAAAGCT+TGG | - | chr1_2:5078223-5078242 | None:intergenic | 45.0% | |
! | CAAGCTTTCTAGTCGTCACA+TGG | + | chr1_2:5078221-5078240 | Msa0051040:CDS | 45.0% |
TCGTCACATGGCTAAACCTA+GGG | + | chr1_2:5078233-5078252 | Msa0051040:CDS | 45.0% | |
ATGAAGCACAGACACGGATA+CGG | + | chr1_2:5078386-5078405 | Msa0051040:intron | 45.0% | |
!!! | GCGTCTTACAGCTTTTTTCG+TGG | - | chr1_2:5079644-5079663 | None:intergenic | 45.0% |
! | TTGGATCTTAAGAGCGTGGT+AGG | - | chr1_2:5079968-5079987 | None:intergenic | 45.0% |
! | AGCATTGGATCTTAAGAGCG+TGG | - | chr1_2:5079972-5079991 | None:intergenic | 45.0% |
GCAACCATTCCCTACTTTGA+TGG | + | chr1_2:5080261-5080280 | Msa0051040:intron | 45.0% | |
ACGACCATCAAAGTAGGGAA+TGG | - | chr1_2:5080268-5080287 | None:intergenic | 45.0% | |
CTATACCAACGACCTTAGGA+AGG | - | chr1_2:5080575-5080594 | None:intergenic | 45.0% | |
GGTCGTTGGTATAGATGTTG+TGG | + | chr1_2:5080581-5080600 | Msa0051040:CDS | 45.0% | |
! | ATGTTGTGGAGTTGGCTCTT+TGG | + | chr1_2:5080595-5080614 | Msa0051040:CDS | 45.0% |
! | TGTTGTGGAGTTGGCTCTTT+GGG | + | chr1_2:5080596-5080615 | Msa0051040:CDS | 45.0% |
CAACTCTCTCTCAGTCATAG+CGG | - | chr1_2:5081498-5081517 | None:intergenic | 45.0% | |
TGAAAAAGACCTTGTCTCCC+AGG | + | chr1_2:5081529-5081548 | Msa0051040:CDS | 45.0% | |
GGGCGGATGATAATTATGAC+AGG | + | chr1_2:5081856-5081875 | Msa0051040:intron | 45.0% | |
GACATGCTATCACCTAGCTA+AGG | - | chr1_2:5082258-5082277 | None:intergenic | 45.0% | |
CGACAATTATCATGGGACAG+AGG | - | chr1_2:5083827-5083846 | None:intergenic | 45.0% | |
GCTTAATATGCTTTGGCCTG+AGG | + | chr1_2:5084165-5084184 | Msa0051040:intron | 45.0% | |
TAATATGCTTTGGCCTGAGG+AGG | + | chr1_2:5084168-5084187 | Msa0051040:intron | 45.0% | |
AATATGCTTTGGCCTGAGGA+GGG | + | chr1_2:5084169-5084188 | Msa0051040:intron | 45.0% | |
CATACTAAGTTGTGTGTCGC+AGG | + | chr1_2:5084346-5084365 | Msa0051040:intron | 45.0% | |
CTATATCCTCTCTCATGTGC+CGG | - | chr1_2:5084448-5084467 | None:intergenic | 45.0% | |
!! | GAGAGGATATAGCATCGGTA+AGG | + | chr1_2:5084456-5084475 | Msa0051040:intron | 45.0% |
! | CCTTTTCCTTGCCTGAACAA+AGG | - | chr1_2:5084589-5084608 | None:intergenic | 45.0% |
CCTTTGTTCAGGCAAGGAAA+AGG | + | chr1_2:5084586-5084605 | Msa0051040:intron | 45.0% | |
CTTGGGTACCCTGCTTAATT+TGG | + | chr1_2:5084867-5084886 | Msa0051040:intron | 45.0% | |
!! | CAGGGCATTTTGGTATAGAG+AGG | + | chr1_2:5085107-5085126 | Msa0051040:intron | 45.0% |
AATTCACACACCAGAGAGAG+AGG | - | chr1_2:5085177-5085196 | None:intergenic | 45.0% | |
!!! | CATTTTTTGGTGCTGGGAGT+GGG | + | chr1_2:5085392-5085411 | Msa0051040:intron | 45.0% |
!! | CTTCTGAGGTATGCCCTTAT+CGG | + | chr1_2:5085650-5085669 | Msa0051040:intron | 45.0% |
GTTGCAAACTACACCCACAA+AGG | - | chr1_2:5085733-5085752 | None:intergenic | 45.0% | |
TTTGCAACGTGTTTGACAGG+AGG | + | chr1_2:5085745-5085764 | Msa0051040:CDS | 45.0% | |
GTCTGCTTACTCTAAACAGC+GGG | + | chr1_2:5086276-5086295 | Msa0051040:intron | 45.0% | |
TCTGCTTACTCTAAACAGCG+GGG | + | chr1_2:5086277-5086296 | Msa0051040:intron | 45.0% | |
CTCCAAAAACATACGCATGC+AGG | - | chr1_2:5086403-5086422 | None:intergenic | 45.0% | |
GAGCCTTGACAAGAATTGCT+TGG | + | chr1_2:5086469-5086488 | Msa0051040:intron | 45.0% | |
GACCCAAGCAATTCTTGTCA+AGG | - | chr1_2:5086475-5086494 | None:intergenic | 45.0% | |
! | CTCTAAACTTGCTTCTTCGC+CGG | + | chr1_2:5086519-5086538 | Msa0051040:CDS | 45.0% |
! | TCTAAACTTGCTTCTTCGCC+GGG | + | chr1_2:5086520-5086539 | Msa0051040:CDS | 45.0% |
TTACCTCATCCACCAGAAGT+GGG | - | chr1_2:5086892-5086911 | None:intergenic | 45.0% | |
TTTACCTCATCCACCAGAAG+TGG | - | chr1_2:5086893-5086912 | None:intergenic | 45.0% | |
GTTGTTAACGGCAACAAAGC+TGG | + | chr1_2:5087048-5087067 | Msa0051040:CDS | 45.0% | |
TCAATGTGGATCCCACACAT+TGG | - | chr1_2:5087284-5087303 | None:intergenic | 45.0% | |
GCACATAGGCATTCTTTAGG+TGG | + | chr1_2:5087481-5087500 | Msa0051040:intron | 45.0% | |
GTGGAGTCAACTGTACGTAT+TGG | - | chr1_2:5087677-5087696 | None:intergenic | 45.0% | |
CTCTGCTTTAACTACTTGGC+TGG | - | chr1_2:5088199-5088218 | None:intergenic | 45.0% | |
AGGCTAAAAGTGGTAGAGCA+GGG | - | chr1_2:5088246-5088265 | None:intergenic | 45.0% | |
AAGGCTAAAAGTGGTAGAGC+AGG | - | chr1_2:5088247-5088266 | None:intergenic | 45.0% | |
!! | ATATGGACAGAGGGTACCTT+TGG | + | chr1_2:5088316-5088335 | Msa0051040:intron | 45.0% |
GGCTGATGTGAATGACTTCT+TGG | - | chr1_2:5088344-5088363 | None:intergenic | 45.0% | |
!! | AGTAGCTGCTCATAATGGAC+TGG | - | chr1_2:5088386-5088405 | None:intergenic | 45.0% |
GTGTCAGTAGCTGCTCATAA+TGG | - | chr1_2:5088391-5088410 | None:intergenic | 45.0% | |
AACTTCGACCCTCTTTACCA+TGG | - | chr1_2:5088437-5088456 | None:intergenic | 45.0% | |
TCCTGGATTTGGGTACACTT+GGG | - | chr1_2:5088503-5088522 | None:intergenic | 45.0% | |
ATCCTGGATTTGGGTACACT+TGG | - | chr1_2:5088504-5088523 | None:intergenic | 45.0% | |
TCTATCCTTCCCCTTAGTGA+TGG | + | chr1_2:5088552-5088571 | Msa0051040:intron | 45.0% | |
CTATCCTTCCCCTTAGTGAT+GGG | + | chr1_2:5088553-5088572 | Msa0051040:intron | 45.0% | |
! | GGAAGACTTTTATGCTGTCG+TGG | + | chr1_2:5088931-5088950 | Msa0051040:intron | 45.0% |
GCATAGATATCCGAGACTCT+AGG | - | chr1_2:5089072-5089091 | None:intergenic | 45.0% | |
CAATATACCGGTCACCTACA+CGG | - | chr1_2:5089102-5089121 | None:intergenic | 45.0% | |
TGAACGGAATGTTCGCCAAA+TGG | + | chr1_2:5089235-5089254 | Msa0051040:CDS | 45.0% | |
GAACGGAATGTTCGCCAAAT+GGG | + | chr1_2:5089236-5089255 | Msa0051040:CDS | 45.0% | |
GTGTTCTATCCTACATTCCC+AGG | + | chr1_2:5089258-5089277 | Msa0051040:CDS | 45.0% | |
!! | TTCTTTGGAGTTTGGCGAAG+AGG | - | chr1_2:5089311-5089330 | None:intergenic | 45.0% |
!! | GTGTTCCTCTGCTTTGGAAA+TGG | + | chr1_2:5089855-5089874 | Msa0051040:intron | 45.0% |
TCGTATGGAGCAGTACATTC+AGG | + | chr1_2:5090396-5090415 | Msa0051040:CDS | 45.0% | |
CGTATGGAGCAGTACATTCA+GGG | + | chr1_2:5090397-5090416 | Msa0051040:CDS | 45.0% | |
AGTACATTCAGGGACAGTCT+AGG | + | chr1_2:5090407-5090426 | Msa0051040:CDS | 45.0% | |
GTACATTCAGGGACAGTCTA+GGG | + | chr1_2:5090408-5090427 | Msa0051040:CDS | 45.0% | |
CAAGCACTTGCTTCCCAAAA+CGG | + | chr1_2:5090566-5090585 | Msa0051040:intron | 45.0% | |
GAAACAGCCTCTTGGAAGAA+GGG | - | chr1_2:5091011-5091030 | None:intergenic | 45.0% | |
TGAAACAGCCTCTTGGAAGA+AGG | - | chr1_2:5091012-5091031 | None:intergenic | 45.0% | |
! | AGCTTGTTCATAGGCTTCAC+TGG | - | chr1_2:5091165-5091184 | None:intergenic | 45.0% |
! | GATAATGAGTTGGGACCCAA+GGG | - | chr1_2:5091280-5091299 | None:intergenic | 45.0% |
! | TGATAATGAGTTGGGACCCA+AGG | - | chr1_2:5091281-5091300 | None:intergenic | 45.0% |
!! | GTCTTTTCCAGTTTGCTCGA+AGG | + | chr1_2:5091336-5091355 | Msa0051040:CDS | 45.0% |
ACTAACCTCTTCAGGTGCAA+CGG | - | chr1_2:5091381-5091400 | None:intergenic | 45.0% | |
! | GATGGACTTGTCAACCTATG+TGG | - | chr1_2:5091885-5091904 | None:intergenic | 45.0% |
CTTAGTGCAAAGGCAACTCT+TGG | - | chr1_2:5092067-5092086 | None:intergenic | 45.0% | |
!!! | ACATTATAAATATTTTTAAA+AGG | + | chr1_2:5079011-5079030 | Msa0051040:intron | 5.0% |
!!! | TTTTTATTTTTTTATTTTGT+AGG | + | chr1_2:5080499-5080518 | Msa0051040:intron | 5.0% |
!!! | AAATAAAATTTTAGTAAATA+TGG | - | chr1_2:5082724-5082743 | None:intergenic | 5.0% |
GGCGAAATGGCGAAATCTAC+TGG | + | chr1_2:5078087-5078106 | Msa0051040:exon | 50.0% | |
!! | TTGCTGATTCACAAGCTCGC+CGG | - | chr1_2:5078128-5078147 | None:intergenic | 50.0% |
GTCGTCACATGGCTAAACCT+AGG | + | chr1_2:5078232-5078251 | Msa0051040:CDS | 50.0% | |
CTAGAGAGAGCAAGAACCCT+AGG | - | chr1_2:5078252-5078271 | None:intergenic | 50.0% | |
! | GAGCCACACTTTGGCTTCTA+AGG | - | chr1_2:5080360-5080379 | None:intergenic | 50.0% |
! | GTGGTTGAGTTGTACGTGAG+AGG | + | chr1_2:5080455-5080474 | Msa0051040:intron | 50.0% |
! | GTTGAGTTGTACGTGAGAGG+AGG | + | chr1_2:5080458-5080477 | Msa0051040:intron | 50.0% |
!! | TGTTTTGGGTCGCCTTCCTA+AGG | + | chr1_2:5080560-5080579 | Msa0051040:CDS | 50.0% |
AAGTCCACGACTTCAAGCTG+AGG | + | chr1_2:5080777-5080796 | Msa0051040:intron | 50.0% | |
AGATCCTCAGCTTGAAGTCG+TGG | - | chr1_2:5080784-5080803 | None:intergenic | 50.0% | |
AGATAAGAAGGGGGAAGGCA+AGG | - | chr1_2:5080994-5081013 | None:intergenic | 50.0% | |
ATGGGAGATAAGAAGGGGGA+AGG | - | chr1_2:5080999-5081018 | None:intergenic | 50.0% | |
!! | GGAATGGAGGGAGTATCCAA+TGG | - | chr1_2:5081105-5081124 | None:intergenic | 50.0% |
! | TCAGTCATAGCGGAAGCAAC+AGG | - | chr1_2:5081488-5081507 | None:intergenic | 50.0% |
! | AGAGGACATGGAGGCTCTTT+TGG | + | chr1_2:5081559-5081578 | Msa0051040:CDS | 50.0% |
! | GAGGACATGGAGGCTCTTTT+GGG | + | chr1_2:5081560-5081579 | Msa0051040:CDS | 50.0% |
ATGTAGGACACTTACAGGGG+CGG | + | chr1_2:5081839-5081858 | Msa0051040:intron | 50.0% | |
ATTATGACAGGGGGAGCCTT+TGG | + | chr1_2:5081868-5081887 | Msa0051040:intron | 50.0% | |
GATCTATGTGCCAGGCAGTA+GGG | + | chr1_2:5082667-5082686 | Msa0051040:intron | 50.0% | |
! | AGGAAGTATGGATACGGCCA+GGG | - | chr1_2:5082979-5082998 | None:intergenic | 50.0% |
! | TAGGAAGTATGGATACGGCC+AGG | - | chr1_2:5082980-5082999 | None:intergenic | 50.0% |
TGCAGGTATGTCATGGGTGT+TGG | + | chr1_2:5083158-5083177 | Msa0051040:intron | 50.0% | |
AAGACTGAAGAGAGAGCTCC+AGG | + | chr1_2:5083202-5083221 | Msa0051040:CDS | 50.0% | |
! | TGTGTGTCGCAGGTGTTGTA+TGG | + | chr1_2:5084356-5084375 | Msa0051040:intron | 50.0% |
! | GTGTGTCGCAGGTGTTGTAT+GGG | + | chr1_2:5084357-5084376 | Msa0051040:intron | 50.0% |
TAAACTCCGGCACATGAGAG+AGG | + | chr1_2:5084439-5084458 | Msa0051040:CDS | 50.0% | |
CCACAGGACAAACTCCAAAG+AGG | - | chr1_2:5085081-5085100 | None:intergenic | 50.0% | |
!! | CCTCTTTGGAGTTTGTCCTG+TGG | + | chr1_2:5085078-5085097 | Msa0051040:intron | 50.0% |
TTTGTCCTGTGGCCTCATCA+GGG | + | chr1_2:5085089-5085108 | Msa0051040:intron | 50.0% | |
CCACTCCCAGCACCAAAAAA+TGG | - | chr1_2:5085394-5085413 | None:intergenic | 50.0% | |
!!! | CCATTTTTTGGTGCTGGGAG+TGG | + | chr1_2:5085391-5085410 | Msa0051040:intron | 50.0% |
! | CGATAAGGGCATACCTCAGA+AGG | - | chr1_2:5085652-5085671 | None:intergenic | 50.0% |
CTCTCATGCTCGCATAAGTG+AGG | - | chr1_2:5085861-5085880 | None:intergenic | 50.0% | |
GATTGCTCGTTGTGCTCTAC+AGG | + | chr1_2:5086055-5086074 | Msa0051040:intron | 50.0% | |
TCAAGGCTCTGCAAGTGTGT+AGG | - | chr1_2:5086458-5086477 | None:intergenic | 50.0% | |
GAGTTCGTTGGCAAACTCAC+GGG | - | chr1_2:5086741-5086760 | None:intergenic | 50.0% | |
GGAGTTCGTTGGCAAACTCA+CGG | - | chr1_2:5086742-5086761 | None:intergenic | 50.0% | |
TGTACTAGCACGGAGTTCGT+TGG | - | chr1_2:5086753-5086772 | None:intergenic | 50.0% | |
GAGCCTTCAAGCCAAACAGT+TGG | - | chr1_2:5086791-5086810 | None:intergenic | 50.0% | |
TGGCTTGAAGGCTCAACTAG+TGG | + | chr1_2:5086797-5086816 | Msa0051040:CDS | 50.0% | |
! | TATCCCACTTCTGGTGGATG+AGG | + | chr1_2:5086886-5086905 | Msa0051040:CDS | 50.0% |
GTTCCTACACTTGTTCCTCC+AGG | + | chr1_2:5087021-5087040 | Msa0051040:CDS | 50.0% | |
!! | CCTCCAGGAGGTGTTGTTAA+CGG | + | chr1_2:5087036-5087055 | Msa0051040:CDS | 50.0% |
TTGCCGTTAACAACACCTCC+TGG | - | chr1_2:5087042-5087061 | None:intergenic | 50.0% | |
GCGTGTCCCACCACTTTATT+TGG | + | chr1_2:5087249-5087268 | Msa0051040:intron | 50.0% | |
!! | TCTTTTTCGTGTGGGGGGTT+TGG | + | chr1_2:5088050-5088069 | Msa0051040:intron | 50.0% |
CCAAGTGGGAAGCCATTGAA+GGG | + | chr1_2:5088165-5088184 | Msa0051040:intron | 50.0% | |
CAAGTGGGAAGCCATTGAAG+GGG | + | chr1_2:5088166-5088185 | Msa0051040:intron | 50.0% | |
CTGGATGTCAACCCCTTCAA+TGG | - | chr1_2:5088180-5088199 | None:intergenic | 50.0% | |
GGCTAAAAGTGGTAGAGCAG+GGG | - | chr1_2:5088245-5088264 | None:intergenic | 50.0% | |
GGTTAAGGGGGTTCGATTAG+AGG | - | chr1_2:5088365-5088384 | None:intergenic | 50.0% | |
TATGAGCAGCTACTGACACC+AGG | + | chr1_2:5088392-5088411 | Msa0051040:intron | 50.0% | |
ACCCAAGTGTACCCAAATCC+AGG | + | chr1_2:5088499-5088518 | Msa0051040:intron | 50.0% | |
GATACCCATCACTAAGGGGA+AGG | - | chr1_2:5088560-5088579 | None:intergenic | 50.0% | |
ACTAAGCCCAGGCCTTTCAA+AGG | + | chr1_2:5088769-5088788 | Msa0051040:intron | 50.0% | |
!! | TGTTGGCCTTTGAAAGGCCT+GGG | - | chr1_2:5088778-5088797 | None:intergenic | 50.0% |
!! | ATGTTGGCCTTTGAAAGGCC+TGG | - | chr1_2:5088779-5088798 | None:intergenic | 50.0% |
TCTATGCAGTTCAGCCGTGT+AGG | + | chr1_2:5089085-5089104 | Msa0051040:intron | 50.0% | |
TGCGATCCTTGCAACTCGTA+TGG | + | chr1_2:5090381-5090400 | Msa0051040:CDS | 50.0% | |
ACTGCTCCATACGAGTTGCA+AGG | - | chr1_2:5090390-5090409 | None:intergenic | 50.0% | |
TCAGGGACAGTCTAGGGATT+TGG | + | chr1_2:5090414-5090433 | Msa0051040:CDS | 50.0% | |
ACTTGCTTCCCAAAACGGAG+AGG | + | chr1_2:5090571-5090590 | Msa0051040:intron | 50.0% | |
GAGTGCCCACAGTAACTGTT+AGG | - | chr1_2:5090759-5090778 | None:intergenic | 50.0% | |
! | GGCATAATGTTTGGCTCGAC+AGG | + | chr1_2:5090872-5090891 | Msa0051040:intron | 50.0% |
TCTCTAGCCCTTCTTCCAAG+AGG | + | chr1_2:5091001-5091020 | Msa0051040:intron | 50.0% | |
AAGTGGGCACAATGTTGGCA+AGG | - | chr1_2:5091121-5091140 | None:intergenic | 50.0% | |
TGCCAACATTGTGCCCACTT+TGG | + | chr1_2:5091121-5091140 | Msa0051040:CDS | 50.0% | |
CCTCAATCCTTCGAGCAAAC+TGG | - | chr1_2:5091346-5091365 | None:intergenic | 50.0% | |
! | CCAGTTTGCTCGAAGGATTG+AGG | + | chr1_2:5091343-5091362 | Msa0051040:CDS | 50.0% |
TGTGTAGCCAGAGGCTATGA+AGG | - | chr1_2:5091427-5091446 | None:intergenic | 50.0% | |
GTGAGATACTGTGTAGCCAG+AGG | - | chr1_2:5091436-5091455 | None:intergenic | 50.0% | |
TTTGACAGCCCAAGCTGGAA+AGG | - | chr1_2:5091745-5091764 | None:intergenic | 50.0% | |
!! | CCATTTTTGACAGCCCAAGC+TGG | - | chr1_2:5091750-5091769 | None:intergenic | 50.0% |
CCAGCTTGGGCTGTCAAAAA+TGG | + | chr1_2:5091747-5091766 | Msa0051040:CDS | 50.0% | |
CTGGCGACGATGTTGAACTC+CGG | + | chr1_2:5078106-5078125 | Msa0051040:CDS | 55.0% | |
ATTGCGGAGGAGCCACACTT+TGG | - | chr1_2:5080369-5080388 | None:intergenic | 55.0% | |
AAAGTGTGGCTCCTCCGCAA+TGG | + | chr1_2:5080368-5080387 | Msa0051040:CDS | 55.0% | |
TTTCGCATCGTCCATTGCGG+AGG | - | chr1_2:5080382-5080401 | None:intergenic | 55.0% | |
! | GGAGTTGGCTCTTTGGGCTA+AGG | + | chr1_2:5080602-5080621 | Msa0051040:CDS | 55.0% |
GCTCTTTGGGCTAAGGTGCA+TGG | + | chr1_2:5080609-5080628 | Msa0051040:intron | 55.0% | |
CATGTCCTCTTCCTCTGCCT+GGG | - | chr1_2:5081549-5081568 | None:intergenic | 55.0% | |
GGATCTATGTGCCAGGCAGT+AGG | + | chr1_2:5082666-5082685 | Msa0051040:intron | 55.0% | |
GGACAATTGTCCCTACTGCC+TGG | - | chr1_2:5082680-5082699 | None:intergenic | 55.0% | |
! | CATTTGCTGCTTCCAGAGCC+TGG | - | chr1_2:5083223-5083242 | None:intergenic | 55.0% |
GTTTGTCCTGTGGCCTCATC+AGG | + | chr1_2:5085088-5085107 | Msa0051040:intron | 55.0% | |
AAATGCCCTGATGAGGCCAC+AGG | - | chr1_2:5085097-5085116 | None:intergenic | 55.0% | |
!! | GTGGCCTCATCAGGGCATTT+TGG | + | chr1_2:5085097-5085116 | Msa0051040:intron | 55.0% |
TCTGCCAACACCTCTCTCTC+TGG | + | chr1_2:5085164-5085183 | Msa0051040:intron | 55.0% | |
! | CACACCAGAGAGAGAGGTGT+TGG | - | chr1_2:5085171-5085190 | None:intergenic | 55.0% |
TGGTTGACTAGTGCCTTGCG+CGG | + | chr1_2:5085814-5085833 | Msa0051040:CDS | 55.0% | |
AACAGCGGGGACAGTTGAAG+AGG | + | chr1_2:5086290-5086309 | Msa0051040:intron | 55.0% | |
TACCGCAGGTCAGCATGATC+AGG | - | chr1_2:5086316-5086335 | None:intergenic | 55.0% | |
ATGTCCTGCACTTGTACCGC+AGG | - | chr1_2:5086330-5086349 | None:intergenic | 55.0% | |
! | AAACTTGCTTCTTCGCCGGG+AGG | + | chr1_2:5086523-5086542 | Msa0051040:CDS | 55.0% |
CCTCCTGGAGGAACAAGTGT+AGG | - | chr1_2:5087027-5087046 | None:intergenic | 55.0% | |
CCTACACTTGTTCCTCCAGG+AGG | + | chr1_2:5087024-5087043 | Msa0051040:CDS | 55.0% | |
CCGTTAACAACACCTCCTGG+AGG | - | chr1_2:5087039-5087058 | None:intergenic | 55.0% | |
GCCAAGTGGGAAGCCATTGA+AGG | + | chr1_2:5088164-5088183 | Msa0051040:intron | 55.0% | |
CCCTTCAATGGCTTCCCACT+TGG | - | chr1_2:5088168-5088187 | None:intergenic | 55.0% | |
GGTCAGAAAGCTGATGCAGC+AGG | + | chr1_2:5089022-5089041 | Msa0051040:CDS | 55.0% | |
TGCTTGGCGACCTAGAGTCT+CGG | + | chr1_2:5089059-5089078 | Msa0051040:CDS | 55.0% | |
AGTTCAGCCGTGTAGGTGAC+CGG | + | chr1_2:5089092-5089111 | Msa0051040:intron | 55.0% | |
GGCCAAAGTGGGCACAATGT+TGG | - | chr1_2:5091126-5091145 | None:intergenic | 55.0% | |
! | GCGCGTGCAAGCTTGTTCAT+AGG | - | chr1_2:5091174-5091193 | None:intergenic | 55.0% |
GTTCACCGTTGCACCTGAAG+AGG | + | chr1_2:5091373-5091392 | Msa0051040:CDS | 55.0% | |
TCGGCTTACCCCAGATAAGC+TGG | - | chr1_2:5091794-5091813 | None:intergenic | 55.0% | |
!! | CGGCACTGATACGTCGACAC+CGG | + | chr1_2:5078406-5078425 | Msa0051040:intron | 60.0% |
!! | GAGAGCGCCCGACAAAGTCA+GGG | - | chr1_2:5078978-5078997 | None:intergenic | 60.0% |
!! | TGAGAGCGCCCGACAAAGTC+AGG | - | chr1_2:5078979-5078998 | None:intergenic | 60.0% |
GGTCGCCTTCCTAAGGTCGT+TGG | + | chr1_2:5080567-5080586 | Msa0051040:CDS | 60.0% | |
AGACCTTGTCTCCCAGGCAG+AGG | + | chr1_2:5081535-5081554 | Msa0051040:CDS | 60.0% | |
CTTCCTCTGCCTGGGAGACA+AGG | - | chr1_2:5081541-5081560 | None:intergenic | 60.0% | |
TGTCTCCCAGGCAGAGGAAG+AGG | + | chr1_2:5081541-5081560 | Msa0051040:CDS | 60.0% | |
CCATGTCCTCTTCCTCTGCC+TGG | - | chr1_2:5081550-5081569 | None:intergenic | 60.0% | |
CCAGGCAGAGGAAGAGGACA+TGG | + | chr1_2:5081547-5081566 | Msa0051040:CDS | 60.0% | |
GGCAGAGGAAGAGGACATGG+AGG | + | chr1_2:5081550-5081569 | Msa0051040:CDS | 60.0% | |
GAAGAGAGAGCTCCAGGCTC+TGG | + | chr1_2:5083208-5083227 | Msa0051040:CDS | 60.0% | |
GCGGTTGCGTGTACCTTCTG+AGG | + | chr1_2:5085636-5085655 | Msa0051040:CDS | 60.0% | |
GGCCTGATCATGCTGACCTG+CGG | + | chr1_2:5086311-5086330 | Msa0051040:CDS | 60.0% | |
CTGACCTGCGGTACAAGTGC+AGG | + | chr1_2:5086323-5086342 | Msa0051040:CDS | 60.0% | |
GGGCACTTCAAGACCGCGCA+AGG | - | chr1_2:5085830-5085849 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 5078017 | 5093095 | 5078017 | ID=Msa0051040;Name=Msa0051040 |
chr1_2 | mRNA | 5078017 | 5093095 | 5078017 | ID=Msa0051040-mRNA-1;Parent=Msa0051040;Name=Msa0051040-mRNA-1;_AED=0.13;_eAED=0.14;_QI=76|0.84|0.84|0.96|0.84|0.88|26|210|911 |
chr1_2 | exon | 5078017 | 5078270 | 5078017 | ID=Msa0051040-mRNA-1:exon:1446;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5079815 | 5079885 | 5079815 | ID=Msa0051040-mRNA-1:exon:1447;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5080100 | 5080180 | 5080100 | ID=Msa0051040-mRNA-1:exon:1448;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5080346 | 5080413 | 5080346 | ID=Msa0051040-mRNA-1:exon:1449;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5080521 | 5080623 | 5080521 | ID=Msa0051040-mRNA-1:exon:1450;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5081437 | 5081585 | 5081437 | ID=Msa0051040-mRNA-1:exon:1451;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5083163 | 5083280 | 5083163 | ID=Msa0051040-mRNA-1:exon:1452;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5084368 | 5084472 | 5084368 | ID=Msa0051040-mRNA-1:exon:1453;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5085556 | 5085657 | 5085556 | ID=Msa0051040-mRNA-1:exon:1454;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5085745 | 5085882 | 5085745 | ID=Msa0051040-mRNA-1:exon:1455;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5086077 | 5086205 | 5086077 | ID=Msa0051040-mRNA-1:exon:1456;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5086295 | 5086375 | 5086295 | ID=Msa0051040-mRNA-1:exon:1457;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5086470 | 5086544 | 5086470 | ID=Msa0051040-mRNA-1:exon:1458;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5086737 | 5086907 | 5086737 | ID=Msa0051040-mRNA-1:exon:1459;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5086988 | 5087120 | 5086988 | ID=Msa0051040-mRNA-1:exon:1460;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5087782 | 5087846 | 5087782 | ID=Msa0051040-mRNA-1:exon:1461;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5088932 | 5089102 | 5088932 | ID=Msa0051040-mRNA-1:exon:1462;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5089200 | 5089279 | 5089200 | ID=Msa0051040-mRNA-1:exon:1463;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5089908 | 5089962 | 5089908 | ID=Msa0051040-mRNA-1:exon:1464;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5090346 | 5090459 | 5090346 | ID=Msa0051040-mRNA-1:exon:1465;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5090894 | 5090997 | 5090894 | ID=Msa0051040-mRNA-1:exon:1466;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5091109 | 5091217 | 5091109 | ID=Msa0051040-mRNA-1:exon:1467;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5091326 | 5091394 | 5091326 | ID=Msa0051040-mRNA-1:exon:1468;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5091739 | 5091804 | 5091739 | ID=Msa0051040-mRNA-1:exon:1469;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5091890 | 5091979 | 5091890 | ID=Msa0051040-mRNA-1:exon:1470;Parent=Msa0051040-mRNA-1 |
chr1_2 | exon | 5092775 | 5093095 | 5092775 | ID=Msa0051040-mRNA-1:exon:1471;Parent=Msa0051040-mRNA-1 |
chr1_2 | five_prime_UTR | 5078017 | 5078092 | 5078017 | ID=Msa0051040-mRNA-1:five_prime_utr;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5078093 | 5078270 | 5078093 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5079815 | 5079885 | 5079815 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5080100 | 5080180 | 5080100 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5080346 | 5080413 | 5080346 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5080521 | 5080623 | 5080521 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5081437 | 5081585 | 5081437 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5083163 | 5083280 | 5083163 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5084368 | 5084472 | 5084368 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5085556 | 5085657 | 5085556 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5085745 | 5085882 | 5085745 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5086077 | 5086205 | 5086077 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5086295 | 5086375 | 5086295 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5086470 | 5086544 | 5086470 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5086737 | 5086907 | 5086737 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5086988 | 5087120 | 5086988 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5087782 | 5087846 | 5087782 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5088932 | 5089102 | 5088932 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5089200 | 5089279 | 5089200 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5089908 | 5089962 | 5089908 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5090346 | 5090459 | 5090346 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5090894 | 5090997 | 5090894 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5091109 | 5091217 | 5091109 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5091326 | 5091394 | 5091326 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5091739 | 5091804 | 5091739 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5091890 | 5091979 | 5091890 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | CDS | 5092775 | 5092885 | 5092775 | ID=Msa0051040-mRNA-1:cds;Parent=Msa0051040-mRNA-1 |
chr1_2 | three_prime_UTR | 5092886 | 5093095 | 5092886 | ID=Msa0051040-mRNA-1:three_prime_utr;Parent=Msa0051040-mRNA-1 |
Gene Sequence |
Protein sequence |