AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1458680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1458680 MtrunA17_Chr2g0304841 90.526 665 59 2 3 666 4 665 0.0 1206
Msa1458680 MtrunA17_Chr4g0074401 43.161 658 296 13 1 651 1 587 1.26e-145 436
Msa1458680 MtrunA17_Chr4g0074411 42.393 677 304 17 1 666 2 603 4.68e-141 425
Msa1458680 MtrunA17_Chr3g0137101 47.421 504 217 9 15 496 6 483 1.22e-133 407
Msa1458680 MtrunA17_Chr1g0149841 43.852 488 222 10 15 496 3 444 1.60e-113 350
Msa1458680 MtrunA17_Chr1g0149851 50.427 351 138 7 15 345 3 337 1.87e-97 310
Msa1458680 MtrunA17_Chr7g0275891 47.287 387 122 13 15 384 3 324 3.81e-93 292
Msa1458680 MtrunA17_Chr4g0067981 45.526 380 174 7 15 382 29 387 3.38e-91 297
Msa1458680 MtrunA17_Chr1g0161431 49.508 305 137 5 17 317 11 302 2.96e-86 283
Msa1458680 MtrunA17_Chr2g0294911 42.896 366 173 8 13 375 25 357 6.70e-85 278
Msa1458680 MtrunA17_Chr7g0275401 55.385 260 105 3 15 274 3 251 7.00e-85 268
Msa1458680 MtrunA17_Chr8g0376881 52.692 260 107 3 14 272 22 266 1.29e-80 265
Msa1458680 MtrunA17_Chr3g0123131 54.086 257 104 3 17 272 13 256 1.71e-79 263
Msa1458680 MtrunA17_Chr4g0074421 57.143 203 70 3 67 269 2 187 6.24e-64 210
Msa1458680 MtrunA17_Chr1g0149831 56.784 199 71 3 76 274 1 184 1.08e-63 210
Msa1458680 MtrunA17_Chr3g0134481 65.909 132 45 0 11 142 2 133 8.58e-54 182
Msa1458680 MtrunA17_Chr3g0134481 62.264 53 20 0 214 266 131 183 2.01e-16 78.2
Msa1458680 MtrunA17_Chr4g0009851 36.822 258 123 4 17 274 11 228 1.16e-47 170
Msa1458680 MtrunA17_Chr4g0009901 34.630 257 128 4 17 273 10 226 1.09e-43 158
Msa1458680 MtrunA17_Chr3g0134461 63.433 134 48 1 11 143 2 135 4.99e-40 145
Msa1458680 MtrunA17_Chr3g0134461 67.797 59 19 0 206 264 134 192 1.66e-18 84.3
Msa1458680 MtrunA17_Chr4g0009981 35.211 213 99 3 62 274 2 175 3.95e-36 136
Msa1458680 MtrunA17_Chr6g0471041 32.331 266 138 5 11 275 8 232 2.50e-35 138
Msa1458680 MtrunA17_Chr8g0391911 30.588 255 149 5 17 264 9 242 5.11e-28 113
Msa1458680 MtrunA17_Chr8g0350761 27.843 255 174 4 20 267 20 271 5.09e-26 112
Msa1458680 MtrunA17_Chr3g0127941 38.095 126 73 2 21 142 56 180 5.70e-24 107
Msa1458680 MtrunA17_Chr7g0276361 38.356 146 77 3 18 153 11 153 9.41e-24 106
Msa1458680 MtrunA17_Chr4g0031961 60.526 76 30 0 197 272 113 188 1.22e-23 102
Msa1458680 MtrunA17_Chr6g0473731 35.625 160 70 2 112 271 25 151 1.90e-23 103
Msa1458680 MtrunA17_Chr1g0181811 39.344 122 71 2 21 139 85 206 2.88e-23 105
Msa1458680 MtrunA17_Chr4g0030271 40.945 127 71 2 17 139 84 210 3.08e-23 105
Msa1458680 MtrunA17_Chr7g0255711 59.155 71 29 0 202 272 78 148 8.41e-22 96.7
Msa1458680 MtrunA17_Chr8g0345901 34.932 146 84 2 23 157 38 183 6.46e-21 97.4
Msa1458680 MtrunA17_Chr8g0383961 33.094 139 93 0 9 147 6 144 9.95e-21 92.4
Msa1458680 MtrunA17_Chr4g0009991 32.258 155 65 2 110 264 2 116 7.41e-20 85.9
Msa1458680 MtrunA17_Chr3g0091641 28.251 223 147 4 5 218 10 228 1.92e-19 92.4
Msa1458680 MtrunA17_Chr4g0011071 28.571 175 86 3 67 241 39 174 1.17e-18 84.3
Msa1458680 MtrunA17_Chr4g0061021 31.373 153 100 2 5 154 19 169 1.31e-18 90.1
Msa1458680 MtrunA17_Chr6g0456631 31.579 133 88 2 15 145 7 138 5.46e-18 82.0
Msa1458680 MtrunA17_Chr4g0054981 56.923 65 28 0 211 275 306 370 7.20e-18 87.4
Msa1458680 MtrunA17_Chr4g0054981 32.800 125 78 4 17 139 14 134 6.73e-11 65.5
Msa1458680 MtrunA17_Chr5g0400241 35.484 155 81 5 211 360 307 447 1.71e-17 86.3
Msa1458680 MtrunA17_Chr5g0400241 36.508 126 72 5 17 139 14 134 1.03e-12 71.2
Msa1458680 MtrunA17_Chr2g0324891 47.436 78 41 0 194 271 140 217 3.33e-17 84.7
Msa1458680 MtrunA17_Chr4g0040481 56.452 62 27 0 210 271 153 214 4.76e-17 84.0
Msa1458680 MtrunA17_Chr6g0461641 57.627 59 24 1 211 268 38 96 2.38e-15 78.6
Msa1458680 MtrunA17_Chr2g0321461 57.627 59 24 1 211 268 41 99 4.01e-15 77.8
Msa1458680 MtrunA17_Chr7g0274471 56.522 69 28 2 213 279 216 284 4.05e-15 78.2
Msa1458680 MtrunA17_Chr1g0190301 58.621 58 23 1 211 267 171 228 7.89e-15 77.0
Msa1458680 MtrunA17_Chr1g0175081 53.333 60 27 1 217 275 24 83 1.06e-14 70.5
Msa1458680 MtrunA17_Chr7g0261911 58.621 58 23 1 211 267 258 315 1.47e-14 76.6
Msa1458680 MtrunA17_Chr4g0062921 49.231 65 32 1 212 275 232 296 1.87e-14 76.3
Msa1458680 MtrunA17_Chr5g0417521 54.237 59 26 1 211 268 11 69 2.13e-14 75.1
Msa1458680 MtrunA17_Chr1g0198601 35.897 117 68 3 208 319 204 318 2.26e-14 75.5
Msa1458680 MtrunA17_Chr5g0422621 32.886 149 82 6 205 348 188 323 4.78e-14 74.3
Msa1458680 MtrunA17_Chr4g0045361 40.566 106 48 4 212 310 271 368 7.86e-14 73.9
Msa1458680 MtrunA17_Chr7g0256551 31.579 171 86 5 21 170 9 169 2.61e-13 70.1
Msa1458680 MtrunA17_Chr2g0288601 53.333 60 27 1 214 272 70 129 6.94e-13 66.2
Msa1458680 MtrunA17_Chr6g0469321 70.455 44 13 0 231 274 70 113 7.00e-13 67.4
Msa1458680 MtrunA17_Chr5g0409731 54.545 55 24 1 215 268 25 79 1.06e-12 69.3
Msa1458680 MtrunA17_Chr1g0197171 52.542 59 27 1 211 268 40 98 1.60e-12 68.9
Msa1458680 MtrunA17_Chr2g0290991 44.595 74 36 2 200 268 20 93 4.89e-12 67.4
Msa1458680 MtrunA17_Chr5g0402631 50.000 62 30 1 212 272 211 272 5.10e-12 67.8
Msa1458680 MtrunA17_Chr7g0243081 54.545 55 24 1 214 267 70 124 5.19e-12 67.8
Msa1458680 MtrunA17_Chr7g0258551 57.407 54 22 1 215 267 212 265 5.82e-12 68.2
Msa1458680 MtrunA17_Chr4g0042451 49.153 59 29 1 211 268 13 71 6.03e-12 67.8
Msa1458680 MtrunA17_Chr7g0254981 54.545 55 24 1 215 268 50 104 6.42e-12 66.6
Msa1458680 MtrunA17_Chr2g0320231 54.545 55 24 1 214 267 96 150 1.09e-11 67.0
Msa1458680 MtrunA17_Chr1g0175091 56.364 55 23 1 215 268 258 312 1.17e-11 67.4
Msa1458680 MtrunA17_Chr8g0379121 52.727 55 25 1 214 267 110 164 1.22e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1458680 AT2G25180.1 45.476 431 202 10 13 430 9 419 1.07e-104 330
Msa1458680 AT5G58080.1 42.188 512 234 13 10 495 7 482 8.75e-97 311
Msa1458680 AT4G31920.1 45.412 425 166 11 13 430 9 374 1.55e-95 305
Msa1458680 AT3G16857.1 35.614 570 250 16 5 505 21 542 8.52e-91 296
Msa1458680 AT3G16857.2 35.614 570 250 16 5 505 21 542 1.07e-90 296
Msa1458680 AT1G67710.1 55.039 258 99 4 18 272 8 251 2.85e-78 259
Msa1458680 AT3G16857.3 34.682 519 222 16 56 505 2 472 5.51e-74 250
Msa1458680 AT2G01760.1 47.601 271 115 5 15 274 5 259 1.13e-71 237
Msa1458680 AT2G01760.2 43.144 299 115 6 15 274 5 287 1.43e-65 222
Msa1458680 AT1G67710.2 54.500 200 74 4 76 272 1 186 4.79e-53 189
Msa1458680 AT2G01760.3 48.571 210 81 5 76 274 1 194 3.44e-50 177
Msa1458680 AT5G49240.1 37.097 248 143 2 17 264 38 272 6.47e-44 159
Msa1458680 AT3G62670.1 38.211 246 124 7 36 275 54 277 1.32e-41 157
Msa1458680 AT1G67710.3 49.444 180 74 4 96 272 12 177 1.44e-38 149
Msa1458680 AT1G49190.1 29.446 343 194 9 3 335 16 320 3.01e-37 144
Msa1458680 AT5G07210.2 29.697 330 206 10 19 328 14 337 7.12e-33 134
Msa1458680 AT5G07210.1 28.994 338 206 11 19 328 14 345 2.11e-30 127
Msa1458680 AT2G27070.1 29.290 338 198 9 19 328 14 338 5.84e-30 125
Msa1458680 AT5G59570.2 52.688 93 44 0 180 272 106 198 1.97e-25 107
Msa1458680 AT5G59570.1 52.688 93 44 0 180 272 106 198 1.97e-25 107
Msa1458680 AT5G24470.1 38.194 144 80 4 11 146 36 178 3.50e-25 110
Msa1458680 AT2G46790.3 39.024 123 70 2 21 139 37 158 6.60e-24 105
Msa1458680 AT2G46790.1 39.024 123 70 2 21 139 37 158 7.74e-24 105
Msa1458680 AT1G49190.2 35.507 138 89 0 3 140 16 153 1.26e-23 106
Msa1458680 AT5G05090.1 58.667 75 30 1 199 272 64 138 3.73e-23 100
Msa1458680 AT3G10760.1 56.098 82 35 1 192 272 81 162 9.39e-23 100
Msa1458680 AT3G46640.2 69.492 59 18 0 214 272 143 201 1.96e-22 99.4
Msa1458680 AT3G46640.1 69.492 59 18 0 214 272 143 201 1.96e-22 99.4
Msa1458680 AT3G46640.3 58.904 73 30 0 200 272 129 201 2.25e-22 99.0
Msa1458680 AT2G40970.1 55.844 77 34 0 196 272 86 162 2.32e-22 97.4
Msa1458680 AT5G60100.7 37.008 127 76 2 17 139 59 185 3.56e-21 97.1
Msa1458680 AT5G60100.6 37.008 127 76 2 17 139 59 185 3.56e-21 97.1
Msa1458680 AT5G60100.4 37.008 127 76 2 17 139 59 185 3.56e-21 97.1
Msa1458680 AT5G60100.5 37.008 127 76 2 17 139 59 185 4.94e-21 97.4
Msa1458680 AT5G60100.3 37.008 127 76 2 17 139 59 185 4.94e-21 97.4
Msa1458680 AT5G60100.1 37.008 127 76 2 17 139 59 185 4.94e-21 97.4
Msa1458680 AT5G02810.1 37.705 122 73 1 21 139 78 199 5.91e-21 98.2
Msa1458680 AT5G60100.2 37.008 127 76 2 17 139 59 185 1.01e-20 96.7
Msa1458680 AT5G61380.1 35.075 134 82 2 11 141 11 142 8.11e-20 94.4
Msa1458680 AT5G44190.2 62.121 66 23 1 206 271 140 203 3.99e-19 90.1
Msa1458680 AT5G44190.1 62.121 66 23 1 206 271 140 203 4.98e-19 90.1
Msa1458680 AT1G68210.1 25.475 263 179 4 21 267 13 274 8.06e-19 91.7
Msa1458680 AT4G18020.8 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1458680 AT4G18020.11 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1458680 AT4G18020.4 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1458680 AT4G18020.5 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1458680 AT4G18020.10 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1458680 AT4G18020.7 39.669 121 55 1 173 275 236 356 3.45e-16 82.4
Msa1458680 AT2G20570.1 59.322 59 24 0 213 271 151 209 3.72e-16 81.6
Msa1458680 AT4G18020.3 39.669 121 55 1 173 275 236 356 5.18e-16 82.0
Msa1458680 AT4G18020.2 39.669 121 55 1 173 275 236 356 5.18e-16 82.0
Msa1458680 AT4G18020.1 39.669 121 55 1 173 275 236 356 5.18e-16 82.0
Msa1458680 AT4G18020.6 39.669 121 55 1 173 275 236 356 5.18e-16 82.0
Msa1458680 AT4G18020.9 39.669 121 55 1 173 275 236 356 5.18e-16 82.0
Msa1458680 AT2G20570.2 61.818 55 21 0 217 271 171 225 1.79e-15 79.7
Msa1458680 AT3G04030.1 57.627 59 24 1 211 268 41 99 5.20e-15 77.8
Msa1458680 AT3G04030.3 57.627 59 24 1 211 268 41 99 5.53e-15 77.8
Msa1458680 AT5G18240.2 57.627 59 24 1 211 268 41 99 1.05e-14 77.0
Msa1458680 AT5G18240.3 57.627 59 24 1 211 268 41 99 1.05e-14 77.0
Msa1458680 AT5G18240.5 57.627 59 24 1 211 268 41 99 1.12e-14 77.0
Msa1458680 AT5G18240.1 57.627 59 24 1 211 268 41 99 1.23e-14 77.0
Msa1458680 AT5G18240.4 57.627 59 24 1 211 268 41 99 1.23e-14 77.0
Msa1458680 AT2G03500.1 50.769 65 31 1 212 275 230 294 1.94e-14 76.6
Msa1458680 AT1G25550.1 38.983 118 62 4 212 324 206 318 3.13e-14 75.1
Msa1458680 AT3G04030.2 53.448 58 27 0 211 268 41 98 6.85e-14 74.3
Msa1458680 AT2G42660.1 47.619 84 40 3 216 298 51 131 1.22e-13 72.0
Msa1458680 AT5G45580.1 56.364 55 23 1 215 268 7 61 4.71e-13 70.5
Msa1458680 AT5G45580.2 56.364 55 23 1 215 268 23 77 5.40e-13 70.5
Msa1458680 AT4G28610.1 49.231 65 32 1 215 278 225 289 2.28e-12 70.1
Msa1458680 AT1G68670.1 33.333 132 77 5 212 334 212 341 2.60e-12 69.3
Msa1458680 AT4G37180.1 43.750 80 38 2 210 282 199 278 3.46e-12 68.9
Msa1458680 AT4G37180.2 43.750 80 38 2 210 282 206 285 4.08e-12 68.9
Msa1458680 AT5G06800.3 50.000 68 33 1 202 268 179 246 5.55e-12 67.4
Msa1458680 AT3G25790.1 31.405 121 72 3 219 328 200 320 5.82e-12 68.2
Msa1458680 AT4G04605.1 54.545 55 24 1 214 267 13 67 9.66e-12 65.5
Msa1458680 AT5G29000.4 57.407 54 22 1 215 267 231 284 1.15e-11 67.0
Msa1458680 AT3G04450.3 55.556 54 23 1 215 267 238 291 1.39e-11 66.6
Msa1458680 AT2G01060.1 54.545 55 24 1 215 268 15 69 1.44e-11 66.2
Msa1458680 AT5G29000.1 51.429 70 30 2 215 283 188 254 1.47e-11 67.0
Msa1458680 AT5G29000.3 51.429 70 30 2 215 283 188 254 1.47e-11 67.0
Msa1458680 AT5G29000.2 57.407 54 22 1 215 267 231 284 1.66e-11 67.4
Msa1458680 AT3G04450.4 55.556 54 23 1 215 267 198 251 1.86e-11 67.0
Msa1458680 AT3G04450.2 55.556 54 23 1 215 267 198 251 1.86e-11 67.0
Msa1458680 AT3G04450.1 55.556 54 23 1 215 267 238 291 1.88e-11 67.4
Msa1458680 AT1G49560.1 43.210 81 42 2 214 290 191 271 2.00e-11 66.2
Msa1458680 AT5G06800.1 50.000 68 33 1 202 268 179 246 2.34e-11 66.6
Msa1458680 AT5G06800.2 50.000 68 33 1 202 268 179 246 2.40e-11 66.6
Msa1458680 AT2G38300.1 52.727 55 25 1 214 267 53 107 2.99e-11 65.9
Msa1458680 AT3G13040.3 53.571 56 25 1 214 268 240 295 3.27e-11 66.6
Msa1458680 AT3G13040.1 53.571 56 25 1 214 268 240 295 3.27e-11 66.6
Msa1458680 AT3G13040.2 53.571 56 25 1 214 268 240 295 3.27e-11 66.6
Msa1458680 AT2G06020.1 35.115 131 62 4 170 295 44 156 3.36e-11 65.5
Msa1458680 AT2G40260.1 52.727 55 25 1 214 267 81 135 4.96e-11 65.9
Msa1458680 AT3G56380.2 32.061 131 75 2 21 137 20 150 5.84e-11 61.6
Msa1458680 AT1G13300.1 41.892 74 42 1 200 272 166 239 6.91e-11 64.7

Find 177 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCATCTCGGCACATTTC+TGG 0.123885 tig0039690:+6710 Msa1458680:intergenic
AATAATAATGCAGCTTTCTT+AGG 0.190771 tig0039690:+9705 Msa1458680:intergenic
TTGCTTCCACCAGAAATATT+AGG 0.214532 tig0039690:+8313 Msa1458680:intergenic
GTTGGATATGTTGAGGGTTT+TGG 0.226504 tig0039690:-6357 Msa1458680:CDS
TGTATCTAGTACTATTTCTT+TGG 0.251216 tig0039690:-6024 Msa1458680:three_prime_UTR
GATAAGGTCCCTAATATTTC+TGG 0.257219 tig0039690:-8322 Msa1458680:CDS
TGCACCCATTATGTCTTCTA+AGG 0.258237 tig0039690:+6332 Msa1458680:intergenic
AAGCTTGAGCTTTGATTTGC+AGG 0.261012 tig0039690:+7218 Msa1458680:intergenic
GACGAGAATTTCTCAACTTC+GGG 0.287871 tig0039690:+6435 Msa1458680:intergenic
TTCTGTTGGATCTGCTTCCT+TGG 0.307813 tig0039690:-6976 Msa1458680:CDS
TCAAAAGGGTATGATTAAAT+TGG 0.309229 tig0039690:-6305 Msa1458680:exon
ACAAATTTCTTATGCAAATC+AGG 0.313939 tig0039690:+8118 Msa1458680:intergenic
TGAAGGGACGACTCGTGTTT+TGG 0.320959 tig0039690:+6607 Msa1458680:intergenic
ATATAGACTCTATCTGAAAA+AGG 0.324190 tig0039690:-7501 Msa1458680:CDS
ATTTCTCAACTTCGGGGTAC+TGG 0.340831 tig0039690:+6442 Msa1458680:intergenic
ATTTCCTGCTAGTGCTTTGC+CGG 0.341449 tig0039690:-6862 Msa1458680:CDS
AGATGCCAAGATGGCTTGAT+TGG 0.342606 tig0039690:-6696 Msa1458680:CDS
TACTAGCATGGTTGCTGGAC+TGG 0.346162 tig0039690:-7465 Msa1458680:CDS
TGCTTCCACCAGAAATATTA+GGG 0.349156 tig0039690:+8314 Msa1458680:intergenic
CACCATTGTTTAGGTTAGAT+TGG 0.351569 tig0039690:+7168 Msa1458680:intergenic
GTTATGCTCCGCGACAAAAC+TGG 0.353541 tig0039690:-6653 Msa1458680:CDS
CCATGGTGCATGTGACTATC+TGG 0.354596 tig0039690:-8443 Msa1458680:CDS
CTTCAGACTTTCAAGATAGT+AGG 0.356157 tig0039690:-7094 Msa1458680:CDS
TACCAGTTGCACCATTGTTT+AGG 0.365444 tig0039690:+7159 Msa1458680:intergenic
ACAGTGCTGATCGGAATAAA+AGG 0.366820 tig0039690:-8273 Msa1458680:CDS
TATTATTTCCAATTTCGAAT+AGG 0.373342 tig0039690:+9741 Msa1458680:intergenic
AACCTAAACAATGGTGCAAC+TGG 0.377336 tig0039690:-7161 Msa1458680:CDS
ATTAGGGACCTTATCCTCAT+TGG 0.379637 tig0039690:+8330 Msa1458680:intergenic
CACAATCACTGCTGCTTTGG+AGG 0.379911 tig0039690:-6736 Msa1458680:CDS
TCTGTTGGATCTGCTTCCTT+GGG 0.381102 tig0039690:-6975 Msa1458680:CDS
GGAAGCCTTGTTATCATCCT+TGG 0.385654 tig0039690:+8351 Msa1458680:intergenic
TTATCTTGTCCTAGTGTTGT+CGG 0.386313 tig0039690:-8503 Msa1458680:intron
AAATGTAGCAAGCCATTTGC+AGG 0.393120 tig0039690:-7885 Msa1458680:intron
TATTGAAATTATGCAGACTA+TGG 0.398737 tig0039690:+5982 Msa1458680:intergenic
CTAAGCTCTTCAAGTCGAAC+AGG 0.403595 tig0039690:+8415 Msa1458680:intergenic
AAACACAATCACTGCTGCTT+TGG 0.405385 tig0039690:-6739 Msa1458680:CDS
TTTGGCACCTCAACCAGATC+TGG 0.406957 tig0039690:-7389 Msa1458680:CDS
GAGAGTGAAGGGAGTGCAGA+TGG 0.407661 tig0039690:-8190 Msa1458680:CDS
GCTTGCGATCCTTCCAGATC+TGG 0.414334 tig0039690:+7376 Msa1458680:intergenic
TATCTTGTCCTAGTGTTGTC+GGG 0.415756 tig0039690:-8502 Msa1458680:intron
AACAAATAATTAAAGTCAAA+GGG 0.417835 tig0039690:-9661 Msa1458680:five_prime_UTR
ATAATCGGTGTAGTGAAAAC+TGG 0.418658 tig0039690:-6908 Msa1458680:CDS
TGGATTTAAGTTGCTTGAAT+TGG 0.418723 tig0039690:-8660 Msa1458680:CDS
GGAAACAGAAACATTACTAT+TGG 0.419569 tig0039690:-6954 Msa1458680:CDS
CCTCATCTTCTCCAACTTGT+AGG 0.419938 tig0039690:+6386 Msa1458680:intergenic
GCAGTTACTACAGCTACTAA+TGG 0.421788 tig0039690:-8764 Msa1458680:intron
CTCAAAACATCAACAACTCC+TGG 0.422296 tig0039690:-7244 Msa1458680:CDS
TTCCTTGCAACAACAGATGA+TGG 0.430350 tig0039690:+7042 Msa1458680:intergenic
TGGAACCTTAGAAGACATAA+TGG 0.430422 tig0039690:-6337 Msa1458680:CDS
CAAGGCTTCCAATGAGGATA+AGG 0.433857 tig0039690:-8338 Msa1458680:CDS
TAATGGGTGCAATAGTCAAA+AGG 0.436630 tig0039690:-6320 Msa1458680:CDS
TGTTAGCGATAAGAGGGCTT+TGG 0.437040 tig0039690:+6784 Msa1458680:intergenic
CTTCGGATGAGTGGAATAGA+TGG 0.438392 tig0039690:-7422 Msa1458680:CDS
CATCATACTAGCATGGTTGC+TGG 0.444803 tig0039690:-7470 Msa1458680:CDS
TGGAAGCAATCAGAACATAT+TGG 0.447324 tig0039690:-8299 Msa1458680:CDS
GGGATACAGTGATACAAGTA+TGG 0.449701 tig0039690:-8482 Msa1458680:CDS
AATTCCCAATCAAGCCATCT+TGG 0.450564 tig0039690:+6691 Msa1458680:intergenic
AACTTAAATCCATCCATGTC+AGG 0.455967 tig0039690:+8671 Msa1458680:intergenic
GGAACCTTAGAAGACATAAT+GGG 0.455999 tig0039690:-6336 Msa1458680:CDS
AAAGCACTAGCAGGAAATTC+AGG 0.456039 tig0039690:+6867 Msa1458680:intergenic
TGAATTGGTAGGACTTGAAA+TGG 0.456042 tig0039690:-8645 Msa1458680:CDS
AAACAAATAATTAAAGTCAA+AGG 0.456645 tig0039690:-9662 Msa1458680:five_prime_UTR
TGATACAAGTATGGTATTCA+AGG 0.457007 tig0039690:-8473 Msa1458680:CDS
CTTGCTGAATGCAAATATCA+TGG 0.457929 tig0039690:-9372 Msa1458680:intron
GCCAAGACTTTGAGACAAGT+TGG 0.461455 tig0039690:+9402 Msa1458680:intergenic
ATGCAGCTTTCTTAGGAAGA+TGG 0.461869 tig0039690:+9712 Msa1458680:intergenic
ACTGGACTGTTAGCGATAAG+AGG 0.464251 tig0039690:+6777 Msa1458680:intergenic
ACTAGCATGGTTGCTGGACT+GGG 0.464924 tig0039690:-7464 Msa1458680:CDS
TTGAAGAGCTTAGAAACATA+TGG 0.466760 tig0039690:-8405 Msa1458680:CDS
CTTGAGCTGATGAATATTGA+AGG 0.466769 tig0039690:-7920 Msa1458680:CDS
GCAAGAACACGCATACCAAC+AGG 0.467353 tig0039690:+9438 Msa1458680:intergenic
TGTCGCGGAGCATAACTTGA+AGG 0.467950 tig0039690:+6660 Msa1458680:intergenic
CTTCAATCCTTTGAACTCAC+AGG 0.468279 tig0039690:-6589 Msa1458680:CDS
CCAAGACTTTGAGACAAGTT+GGG 0.470214 tig0039690:+9403 Msa1458680:intergenic
AGAAGAAACCTCGTGTGGTT+TGG 0.471370 tig0039690:-8144 Msa1458680:CDS
CCTCTCATGTTCAAGCCGGC+TGG 0.473952 tig0039690:+7302 Msa1458680:intergenic
TGACGAGAATTTCTCAACTT+CGG 0.474747 tig0039690:+6434 Msa1458680:intergenic
ATCAAGCCATCTTGGCATCT+CGG 0.475852 tig0039690:+6699 Msa1458680:intergenic
TTAGATTGGTTAAGCTCGGT+TGG 0.477468 tig0039690:+7182 Msa1458680:intergenic
GTCAGAAATCAGTCTTCTGT+TGG 0.479269 tig0039690:-6990 Msa1458680:CDS
AAGATGATGAAGAGAGTGAA+GGG 0.479274 tig0039690:-8201 Msa1458680:CDS
GCTTTGATTTGCAGGAATCC+AGG 0.479427 tig0039690:+7226 Msa1458680:intergenic
CTGTGAGTTCAAAGGATTGA+AGG 0.479684 tig0039690:+6590 Msa1458680:intergenic
TTTCTCAACTTCGGGGTACT+GGG 0.482057 tig0039690:+6443 Msa1458680:intergenic
CAGCAACCATGCTAGTATGA+TGG 0.485179 tig0039690:+7471 Msa1458680:intergenic
TTTCCAGACGAAAAGTCAAC+TGG 0.489789 tig0039690:+6759 Msa1458680:intergenic
CGAGGTTTCTTCTGTGATGA+CGG 0.491161 tig0039690:+8154 Msa1458680:intergenic
GATGCCAAGATGGCTTGATT+GGG 0.492450 tig0039690:-6695 Msa1458680:CDS
TCCCAAGTTGGATATGTTGA+GGG 0.496240 tig0039690:-6363 Msa1458680:CDS
AACCCTCAACATATCCAACT+TGG 0.496341 tig0039690:+6361 Msa1458680:intergenic
GCGGTAATGATTCTTACCTT+CGG 0.498032 tig0039690:-7439 Msa1458680:CDS
ATCAAAGGAGAGATGAAGAT+GGG 0.500012 tig0039690:-9476 Msa1458680:CDS
TAGGTTAGATTGGTTAAGCT+CGG 0.501769 tig0039690:+7178 Msa1458680:intergenic
GTTTGTGCTGTTAATCAACT+TGG 0.503058 tig0039690:-8097 Msa1458680:CDS
ATGGTTGCTGGACTGGGCGG+CGG 0.508918 tig0039690:-7458 Msa1458680:CDS
TTCAGACTTTCAAGATAGTA+GGG 0.510320 tig0039690:-7093 Msa1458680:CDS
AACAGAAACATTACTATTGG+CGG 0.510655 tig0039690:-6951 Msa1458680:CDS
AGCAACCATGCTAGTATGAT+GGG 0.510988 tig0039690:+7472 Msa1458680:intergenic
TTTAAGTTGCTTGAATTGGT+AGG 0.511254 tig0039690:-8656 Msa1458680:CDS
AGAATTTGTCAATGCCCTAC+TGG 0.521387 tig0039690:+6560 Msa1458680:intergenic
AATCAAAGGAGAGATGAAGA+TGG 0.521500 tig0039690:-9477 Msa1458680:CDS
ATAGATGGATATGCAGACTT+TGG 0.523223 tig0039690:-7407 Msa1458680:CDS
CCCAACTTGTCTCAAAGTCT+TGG 0.525945 tig0039690:-9403 Msa1458680:CDS
TTATGCTCCGCGACAAAACT+GGG 0.527456 tig0039690:-6652 Msa1458680:CDS
TTAAATCAAATAGATTCCAC+TGG 0.528119 tig0039690:-7128 Msa1458680:CDS
TCACAACAGACACACAATGC+AGG 0.528194 tig0039690:-7017 Msa1458680:CDS
GAAGATGATGAAGAGAGTGA+AGG 0.530545 tig0039690:-8202 Msa1458680:CDS
GTCCCAAGTTGGATATGTTG+AGG 0.530635 tig0039690:-6364 Msa1458680:CDS
AAGGAAGGAGCAAGATGAGG+AGG 0.530715 tig0039690:-8239 Msa1458680:CDS
CTCACAGGTTTGTTCCAGTA+GGG 0.532258 tig0039690:-6574 Msa1458680:CDS
CACGCATACCAACAGGAAAA+CGG 0.532394 tig0039690:+9445 Msa1458680:intergenic
AGATGGGTGTGGAGAATCAA+AGG 0.532717 tig0039690:-9491 Msa1458680:CDS
AATGGGTGCAATAGTCAAAA+GGG 0.534269 tig0039690:-6319 Msa1458680:CDS
AAACTGGGCAGAAAATAAAC+CGG 0.545815 tig0039690:-6637 Msa1458680:CDS
CAAGAATAAAGACCTGCAAA+TGG 0.545943 tig0039690:+7873 Msa1458680:intergenic
CACGAATGATGCCTACAAGT+TGG 0.548868 tig0039690:-6397 Msa1458680:CDS
ATAAAAGGCTCGGTAAAAGA+AGG 0.549420 tig0039690:-8258 Msa1458680:CDS
GAGGTTTCTTCTGTGATGAC+GGG 0.558825 tig0039690:+8155 Msa1458680:intergenic
CAAAGCTCAAGCTTATTACA+TGG 0.559367 tig0039690:-7209 Msa1458680:CDS
GATTCTTACCTTCGGATGAG+TGG 0.560817 tig0039690:-7431 Msa1458680:CDS
CATACCGGCAAAGCACTAGC+AGG 0.561071 tig0039690:+6858 Msa1458680:intergenic
AAGAAGGAAGGAGCAAGATG+AGG 0.564374 tig0039690:-8242 Msa1458680:CDS
CTACCGAAAACTCCGCTCGA+TGG 0.564638 tig0039690:+7335 Msa1458680:intergenic
TGTATGAACTTACTGATGAC+AGG 0.566085 tig0039690:+8617 Msa1458680:intergenic
CAGATAGTCACATGCACCAT+GGG 0.568320 tig0039690:+8444 Msa1458680:intergenic
AATTCCTCTCATGTTCAAGC+CGG 0.569294 tig0039690:+7298 Msa1458680:intergenic
AACCATCATCTGTTGTTGCA+AGG 0.571223 tig0039690:-7044 Msa1458680:CDS
GATACAAGTATGGTATTCAA+GGG 0.580166 tig0039690:-8472 Msa1458680:CDS
CTGGACTGTTAGCGATAAGA+GGG 0.580850 tig0039690:+6778 Msa1458680:intergenic
AGTAATGTTTCTGTTTCCCA+AGG 0.584116 tig0039690:+6959 Msa1458680:intergenic
ATTTAGTTTAGTTTAGTCGA+CGG 0.585120 tig0039690:-6134 Msa1458680:three_prime_UTR
TAATGTTATTGAGAGGCAGT+TGG 0.591128 tig0039690:+6817 Msa1458680:intergenic
GTGGCTATGCCTGACATGGA+TGG 0.592957 tig0039690:-8680 Msa1458680:CDS
GATCCTTCCAGATCTGGTTG+AGG 0.592986 tig0039690:+7382 Msa1458680:intergenic
ACCCTCAACATATCCAACTT+GGG 0.593353 tig0039690:+6362 Msa1458680:intergenic
GAACAAACCTGTGAGTTCAA+AGG 0.594050 tig0039690:+6582 Msa1458680:intergenic
GGGGTACTGGGCAACTGACG+TGG 0.594340 tig0039690:+6455 Msa1458680:intergenic
TTGAGCTGATGAATATTGAA+GGG 0.595042 tig0039690:-7919 Msa1458680:CDS
ACTCCGCTCGATGGATATGA+CGG 0.596427 tig0039690:+7344 Msa1458680:intergenic
TAGCCACATCACTGATAACC+AGG 0.596968 tig0039690:+8696 Msa1458680:intergenic
CACAACAGACACACAATGCA+GGG 0.597049 tig0039690:-7016 Msa1458680:CDS
TTATTGAAAGACTTGCATAC+CGG 0.597636 tig0039690:+6843 Msa1458680:intergenic
AATGTGCCGAGATGCCAAGA+TGG 0.600462 tig0039690:-6705 Msa1458680:CDS
AGGGAGTGCAGATGGAGATG+AGG 0.602885 tig0039690:-8182 Msa1458680:CDS
AAGGTCCCTAATATTTCTGG+TGG 0.603122 tig0039690:-8319 Msa1458680:CDS
AAAGCAGTAATGTTATTGAG+AGG 0.604446 tig0039690:+6810 Msa1458680:intergenic
GAGAAGATGAGGTCCCAAGT+TGG 0.610844 tig0039690:-6375 Msa1458680:CDS
ACTCACAGGTTTGTTCCAGT+AGG 0.610848 tig0039690:-6575 Msa1458680:CDS
CATCTATTCCACTCATCCGA+AGG 0.612751 tig0039690:+7423 Msa1458680:intergenic
TGTGAGTTCAAAGGATTGAA+GGG 0.613107 tig0039690:+6591 Msa1458680:intergenic
TATTGGAGAACAGTGCTGAT+CGG 0.614955 tig0039690:-8282 Msa1458680:CDS
GTATTCAAGGGTGTTACCCA+TGG 0.618028 tig0039690:-8460 Msa1458680:CDS
CCAGATAGTCACATGCACCA+TGG 0.618479 tig0039690:+8443 Msa1458680:intergenic
GGTAGGCTGAATTCTCCAGC+CGG 0.622126 tig0039690:-7317 Msa1458680:CDS
TGATGTGGCTATGCCTGACA+TGG 0.623238 tig0039690:-8684 Msa1458680:CDS
AACTCCCCATCATACTAGCA+TGG 0.628311 tig0039690:-7477 Msa1458680:CDS
AACCAATCTAACCTAAACAA+TGG 0.629254 tig0039690:-7170 Msa1458680:CDS
GCTGATCGGAATAAAAGGCT+CGG 0.629794 tig0039690:-8268 Msa1458680:CDS
TGGATTGAAAGTTTAGTCTG+CGG 0.631070 tig0039690:-6190 Msa1458680:three_prime_UTR
AAGGCTCGGTAAAAGAAGGA+AGG 0.633186 tig0039690:-8254 Msa1458680:CDS
CCTACAAGTTGGAGAAGATG+AGG 0.646079 tig0039690:-6386 Msa1458680:CDS
TGAAGCAGTTGCAAATCCAG+TGG 0.651314 tig0039690:+7112 Msa1458680:intergenic
TAATTCCAAGGATGATAACA+AGG 0.654052 tig0039690:-8356 Msa1458680:CDS
CCAGCCGGCTTGAACATGAG+AGG 0.656492 tig0039690:-7302 Msa1458680:CDS
TCAAAGGAGAGATGAAGATG+GGG 0.663775 tig0039690:-9475 Msa1458680:CDS
GCACCTCAACCAGATCTGGA+AGG 0.664461 tig0039690:-7385 Msa1458680:CDS
TGATAACAAGGCTTCCAATG+AGG 0.667904 tig0039690:-8344 Msa1458680:CDS
TCAGGAGACCAAACCACACG+AGG 0.674901 tig0039690:+8136 Msa1458680:intergenic
ACGAGAATTTCTCAACTTCG+GGG 0.680347 tig0039690:+6436 Msa1458680:intergenic
TGACCTGGTTATCAGTGATG+TGG 0.683171 tig0039690:-8699 Msa1458680:CDS
AAACAGAAAGAACTATGACC+TGG 0.684794 tig0039690:-8714 Msa1458680:CDS
GCAACCATGCTAGTATGATG+GGG 0.686090 tig0039690:+7473 Msa1458680:intergenic
AGCATGGTTGCTGGACTGGG+CGG 0.687235 tig0039690:-7461 Msa1458680:CDS
TTGCCGTCATATCCATCGAG+CGG 0.699753 tig0039690:-7347 Msa1458680:CDS
ATCACAGAAGAAACCTCGTG+TGG 0.712689 tig0039690:-8149 Msa1458680:CDS
AAATAAATAAAATGATAACG+CGG 0.727638 tig0039690:+6093 Msa1458660:intergenic
CGATGGATATGACGGCAATG+TGG 0.745057 tig0039690:+7352 Msa1458660:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATATATTTTTTTTTT+AGG - tig0039690:6901-6920 Msa1458680:CDS 0.0%
!!! ATATTTTTTTTTTAGGTTTT+TGG - tig0039690:6908-6927 Msa1458680:CDS 10.0%
!! TAAAAAATAATTTCATGATT+TGG + tig0039690:7935-7954 Msa1458680:intergenic 10.0%
!!! TTTTATTTATTTTGGTATAA+CGG - tig0039690:9663-9682 Msa1458680:five_prime_UTR 10.0%
!! AAACAAATAATTAAAGTCAA+AGG - tig0039690:6083-6102 Msa1458680:three_prime_UTR 15.0%
!! AACAAATAATTAAAGTCAAA+GGG - tig0039690:6084-6103 Msa1458680:three_prime_UTR 15.0%
!! TGAACTAAAACATAAAATTA+AGG + tig0039690:6435-6454 Msa1458680:intergenic 15.0%
!! TTTGAGAAAATCATATAATT+CGG + tig0039690:6602-6621 Msa1458680:intergenic 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG - tig0039690:6609-6628 Msa1458680:CDS 15.0%
!! ATAAATGTTAATTCATCATT+TGG + tig0039690:8023-8042 Msa1458680:intergenic 15.0%
!!! CTAATTTTTTGGATTATAAT+CGG - tig0039690:8822-8841 Msa1458680:intron 15.0%
!!! AAATAAATAAAATGATAACG+CGG + tig0039690:9655-9674 Msa1458680:intergenic 15.0%
!!! CGTTATCATTTTATTTATTT+TGG - tig0039690:9655-9674 Msa1458680:five_prime_UTR 15.0%
!! TGATATAAAAAAGTTAGACA+TGG - tig0039690:5971-5990 Msa1458680:three_prime_UTR 20.0%
!!! ATTATTTTCCTATTCGAAAT+TGG - tig0039690:5996-6015 Msa1458680:three_prime_UTR 20.0%
!! TATTATTTCCAATTTCGAAT+AGG + tig0039690:6007-6026 Msa1458680:intergenic 20.0%
!!! TCTGTTTTGTTTTGTTTTAT+TGG - tig0039690:6200-6219 Msa1458680:three_prime_UTR 20.0%
!!! TTGTTTCTTTATTTTGAAGA+TGG - tig0039690:6237-6256 Msa1458680:three_prime_UTR 20.0%
!!! TGTTTCTTTATTTTGAAGAT+GGG - tig0039690:6238-6257 Msa1458680:three_prime_UTR 20.0%
!!! TACTAAGTTCTAAAGTAATA+AGG + tig0039690:6484-6503 Msa1458680:intergenic 20.0%
!! TCTTAAATTATTATACGTGT+CGG + tig0039690:6762-6781 Msa1458680:intergenic 20.0%
!!! TTACATTGCTATTAGAATTT+AGG - tig0039690:6935-6954 Msa1458680:CDS 20.0%
!! CATTCTTCTATTTACAATAA+CGG - tig0039690:7174-7193 Msa1458680:CDS 20.0%
!! ATTCTTCTATTTACAATAAC+GGG - tig0039690:7175-7194 Msa1458680:CDS 20.0%
!!! TGGAATTAGTTTTTTTCTTT+CGG + tig0039690:7377-7396 Msa1458680:intergenic 20.0%
!! AAAGAAAAAAACTAATTCCA+AGG - tig0039690:7377-7396 Msa1458680:CDS 20.0%
!!! CATGAGAATAAATCTTTTAT+TGG + tig0039690:7772-7791 Msa1458680:intergenic 20.0%
!!! ATAATTTCATGATTTGGAAA+AGG + tig0039690:7929-7948 Msa1458680:intergenic 20.0%
!!! TAGTCTACTACATTATTTTT+TGG - tig0039690:9535-9554 Msa1458680:intron 20.0%
!!! TGAATTTTGAATACTTCTTT+TGG - tig0039690:9691-9710 Msa1458680:five_prime_UTR 20.0%
! AATAATAATGCAGCTTTCTT+AGG + tig0039690:6043-6062 Msa1458680:intergenic 25.0%
! TTTAGTGTAATCATTTGTGT+CGG - tig0039690:6793-6812 Msa1458680:CDS 25.0%
!!! TAGAATTTAGGTTTGATTTG+TGG - tig0039690:6947-6966 Msa1458680:CDS 25.0%
! ACAAATTTCTTATGCAAATC+AGG + tig0039690:7630-7649 Msa1458680:intergenic 25.0%
! ATTTCGTCATAAAAATGAAG+AGG + tig0039690:8164-8183 Msa1458680:intergenic 25.0%
! ATATAGACTCTATCTGAAAA+AGG - tig0039690:8244-8263 Msa1458680:CDS 25.0%
! TTAAATCAAATAGATTCCAC+TGG - tig0039690:8617-8636 Msa1458680:intron 25.0%
!! TCTTTTGTTGATCATGTATA+TGG - tig0039690:9262-9281 Msa1458680:intron 25.0%
!! TCAAAAGGGTATGATTAAAT+TGG - tig0039690:9440-9459 Msa1458680:CDS 25.0%
!! ATTTAGTTTAGTTTAGTCGA+CGG - tig0039690:9611-9630 Msa1458680:five_prime_UTR 25.0%
!! TGTATCTAGTACTATTTCTT+TGG - tig0039690:9721-9740 Msa1458680:five_prime_UTR 25.0%
! TATTGAAATTATGCAGACTA+TGG + tig0039690:9766-9785 Msa1458680:intergenic 25.0%
! TTTTGGTCTAGAAAAAGTGA+AGG - tig0039690:6122-6141 Msa1458680:three_prime_UTR 30.0%
!! AAGTTCTAAAGTAATAAGGC+TGG + tig0039690:6480-6499 Msa1458680:intergenic 30.0%
TCTCAAATTATTAACGGTGT+TGG - tig0039690:6615-6634 Msa1458680:CDS 30.0%
TTGATGCACTAAAAATGTTG+AGG - tig0039690:7006-7025 Msa1458680:CDS 30.0%
TGATGCACTAAAAATGTTGA+GGG - tig0039690:7007-7026 Msa1458680:CDS 30.0%
!! TGGATTTAAGTTGCTTGAAT+TGG - tig0039690:7085-7104 Msa1458680:CDS 30.0%
!! TTTAAGTTGCTTGAATTGGT+AGG - tig0039690:7089-7108 Msa1458680:CDS 30.0%
!! AATAACGGGTTGAATTGAAT+CGG - tig0039690:7189-7208 Msa1458680:CDS 30.0%
! ATTGAATCGGTTTATTGACT+CGG - tig0039690:7202-7221 Msa1458680:CDS 30.0%
TGATACAAGTATGGTATTCA+AGG - tig0039690:7272-7291 Msa1458680:CDS 30.0%
GATACAAGTATGGTATTCAA+GGG - tig0039690:7273-7292 Msa1458680:CDS 30.0%
TTGAAGAGCTTAGAAACATA+TGG - tig0039690:7340-7359 Msa1458680:CDS 30.0%
TAATTCCAAGGATGATAACA+AGG - tig0039690:7389-7408 Msa1458680:CDS 30.0%
AACAACTTCATATGTAGACA+TGG - tig0039690:7734-7753 Msa1458680:intron 30.0%
! ATCAGCTCAAGTATTTTCTT+CGG + tig0039690:7816-7835 Msa1458680:intergenic 30.0%
TTGAGCTGATGAATATTGAA+GGG - tig0039690:7826-7845 Msa1458680:intron 30.0%
AATAAACTTGTCTAGTCAGT+AGG + tig0039690:8109-8128 Msa1458680:intergenic 30.0%
AACCAATCTAACCTAAACAA+TGG - tig0039690:8575-8594 Msa1458680:intron 30.0%
TTCAGACTTTCAAGATAGTA+GGG - tig0039690:8652-8671 Msa1458680:CDS 30.0%
GGAAACAGAAACATTACTAT+TGG - tig0039690:8791-8810 Msa1458680:intron 30.0%
AACAGAAACATTACTATTGG+CGG - tig0039690:8794-8813 Msa1458680:intron 30.0%
TTATTGAAAGACTTGCATAC+CGG + tig0039690:8905-8924 Msa1458680:intergenic 30.0%
AAAGCAGTAATGTTATTGAG+AGG + tig0039690:8938-8957 Msa1458680:intergenic 30.0%
! GGTTTTTGTCACTGTTCTTT+TGG - tig0039690:6105-6124 Msa1458680:three_prime_UTR 35.0%
!!! CTTTATTTTGAAGATGGGTG+TGG - tig0039690:6243-6262 Msa1458680:three_prime_UTR 35.0%
AATCAAAGGAGAGATGAAGA+TGG - tig0039690:6268-6287 Msa1458680:three_prime_UTR 35.0%
ATCAAAGGAGAGATGAAGAT+GGG - tig0039690:6269-6288 Msa1458680:three_prime_UTR 35.0%
CTTGCTGAATGCAAATATCA+TGG - tig0039690:6373-6392 Msa1458680:CDS 35.0%
ACAGACACACTATTTCGATT+AGG - tig0039690:6520-6539 Msa1458680:CDS 35.0%
GTAACTATATGTGTCAGTGT+CGG + tig0039690:6578-6597 Msa1458680:intergenic 35.0%
AAATCTATGAAGCACGGATA+CGG + tig0039690:6652-6671 Msa1458680:intergenic 35.0%
GTAGCAAAATCTATGAAGCA+CGG + tig0039690:6658-6677 Msa1458680:intergenic 35.0%
AAACAGAAAGAACTATGACC+TGG - tig0039690:7031-7050 Msa1458680:CDS 35.0%
AACTTAAATCCATCCATGTC+AGG + tig0039690:7077-7096 Msa1458680:intergenic 35.0%
TGAATTGGTAGGACTTGAAA+TGG - tig0039690:7100-7119 Msa1458680:CDS 35.0%
TGTATGAACTTACTGATGAC+AGG + tig0039690:7131-7150 Msa1458680:intergenic 35.0%
TTATCTTGTCCTAGTGTTGT+CGG - tig0039690:7242-7261 Msa1458680:CDS 35.0%
GATAAGGTCCCTAATATTTC+TGG - tig0039690:7423-7442 Msa1458680:CDS 35.0%
TGCTTCCACCAGAAATATTA+GGG + tig0039690:7434-7453 Msa1458680:intergenic 35.0%
TTGCTTCCACCAGAAATATT+AGG + tig0039690:7435-7454 Msa1458680:intergenic 35.0%
TGGAAGCAATCAGAACATAT+TGG - tig0039690:7446-7465 Msa1458680:CDS 35.0%
! ATAAAAGGCTCGGTAAAAGA+AGG - tig0039690:7487-7506 Msa1458680:CDS 35.0%
AAGATGATGAAGAGAGTGAA+GGG - tig0039690:7544-7563 Msa1458680:intron 35.0%
! GTTTGTGCTGTTAATCAACT+TGG - tig0039690:7648-7667 Msa1458680:intron 35.0%
!! ATTCTCATGTTTGTTGTTGC+AGG - tig0039690:7783-7802 Msa1458680:intron 35.0%
!! TTCTCATGTTTGTTGTTGCA+GGG - tig0039690:7784-7803 Msa1458680:intron 35.0%
CTTGAGCTGATGAATATTGA+AGG - tig0039690:7825-7844 Msa1458680:intron 35.0%
CAAGAATAAAGACCTGCAAA+TGG + tig0039690:7875-7894 Msa1458680:intergenic 35.0%
AACGATTATGGTGACTACAA+AGG + tig0039690:7898-7917 Msa1458680:intergenic 35.0%
AAGGCTAAACAGAACGATTA+TGG + tig0039690:7910-7929 Msa1458680:intergenic 35.0%
ATAGATGGATATGCAGACTT+TGG - tig0039690:8338-8357 Msa1458680:CDS 35.0%
!!! TTGATGTTTTGAGACTGAAC+AGG + tig0039690:8494-8513 Msa1458680:intergenic 35.0%
CAAAGCTCAAGCTTATTACA+TGG - tig0039690:8536-8555 Msa1458680:intron 35.0%
! TAGGTTAGATTGGTTAAGCT+CGG + tig0039690:8570-8589 Msa1458680:intergenic 35.0%
! CACCATTGTTTAGGTTAGAT+TGG + tig0039690:8580-8599 Msa1458680:intergenic 35.0%
CTTCAGACTTTCAAGATAGT+AGG - tig0039690:8651-8670 Msa1458680:CDS 35.0%
! AGTAATGTTTCTGTTTCCCA+AGG + tig0039690:8789-8808 Msa1458680:intergenic 35.0%
!!! TGGCGGTTCTTCTAATTTTT+TGG - tig0039690:8811-8830 Msa1458680:intron 35.0%
ATAATCGGTGTAGTGAAAAC+TGG - tig0039690:8837-8856 Msa1458680:intron 35.0%
TAATGTTATTGAGAGGCAGT+TGG + tig0039690:8931-8950 Msa1458680:intergenic 35.0%
AAACTGGGCAGAAAATAAAC+CGG - tig0039690:9108-9127 Msa1458680:intron 35.0%
TGTGAGTTCAAAGGATTGAA+GGG + tig0039690:9157-9176 Msa1458680:intergenic 35.0%
TGACGAGAATTTCTCAACTT+CGG + tig0039690:9314-9333 Msa1458680:intergenic 35.0%
TGGAACCTTAGAAGACATAA+TGG - tig0039690:9408-9427 Msa1458680:CDS 35.0%
GGAACCTTAGAAGACATAAT+GGG - tig0039690:9409-9428 Msa1458680:CDS 35.0%
! TAATGGGTGCAATAGTCAAA+AGG - tig0039690:9425-9444 Msa1458680:CDS 35.0%
AATGGGTGCAATAGTCAAAA+GGG - tig0039690:9426-9445 Msa1458680:CDS 35.0%
GTAGACTAGAGCAAGAAAAA+AGG + tig0039690:9523-9542 Msa1458680:intergenic 35.0%
TGGATTGAAAGTTTAGTCTG+CGG - tig0039690:9555-9574 Msa1458680:intron 35.0%
ATGCAGCTTTCTTAGGAAGA+TGG + tig0039690:6036-6055 Msa1458680:intergenic 40.0%
AGAGCAGAACATAGAGTAAG+AGG - tig0039690:6157-6176 Msa1458680:three_prime_UTR 40.0%
TCAAAGGAGAGATGAAGATG+GGG - tig0039690:6270-6289 Msa1458680:three_prime_UTR 40.0%
!! CCAAGACTTTGAGACAAGTT+GGG + tig0039690:6345-6364 Msa1458680:intergenic 40.0%
TCATGTGTCCAAGCTTCATA+GGG + tig0039690:6705-6724 Msa1458680:intergenic 40.0%
! GTAATCATTTGTGTCGGTGT+CGG - tig0039690:6799-6818 Msa1458680:CDS 40.0%
ATCTGGATACACATTATCCG+AGG - tig0039690:6827-6846 Msa1458680:CDS 40.0%
GCAGTTACTACAGCTACTAA+TGG - tig0039690:6981-7000 Msa1458680:CDS 40.0%
TATCTTGTCCTAGTGTTGTC+GGG - tig0039690:7243-7262 Msa1458680:CDS 40.0%
GGGATACAGTGATACAAGTA+TGG - tig0039690:7263-7282 Msa1458680:CDS 40.0%
TGATAACAAGGCTTCCAATG+AGG - tig0039690:7401-7420 Msa1458680:CDS 40.0%
ATTAGGGACCTTATCCTCAT+TGG + tig0039690:7418-7437 Msa1458680:intergenic 40.0%
!! AAGGTCCCTAATATTTCTGG+TGG - tig0039690:7426-7445 Msa1458680:CDS 40.0%
!! TATTGGAGAACAGTGCTGAT+CGG - tig0039690:7463-7482 Msa1458680:CDS 40.0%
!! ACAGTGCTGATCGGAATAAA+AGG - tig0039690:7472-7491 Msa1458680:CDS 40.0%
GAAGATGATGAAGAGAGTGA+AGG - tig0039690:7543-7562 Msa1458680:intron 40.0%
!! TCTCATGTTTGTTGTTGCAG+GGG - tig0039690:7785-7804 Msa1458680:intron 40.0%
!!! ATGGCTTGCTACATTTTCTC+TGG + tig0039690:7856-7875 Msa1458680:intergenic 40.0%
AAATGTAGCAAGCCATTTGC+AGG - tig0039690:7860-7879 Msa1458680:intron 40.0%
AGCAACCATGCTAGTATGAT+GGG + tig0039690:8276-8295 Msa1458680:intergenic 40.0%
GCGGTAATGATTCTTACCTT+CGG - tig0039690:8306-8325 Msa1458680:CDS 40.0%
AATTCCTCTCATGTTCAAGC+CGG + tig0039690:8450-8469 Msa1458680:intergenic 40.0%
CTCAAAACATCAACAACTCC+TGG - tig0039690:8501-8520 Msa1458680:intron 40.0%
!! AAGCTTGAGCTTTGATTTGC+AGG + tig0039690:8530-8549 Msa1458680:intergenic 40.0%
! TTAGATTGGTTAAGCTCGGT+TGG + tig0039690:8566-8585 Msa1458680:intergenic 40.0%
AACCTAAACAATGGTGCAAC+TGG - tig0039690:8584-8603 Msa1458680:intron 40.0%
TACCAGTTGCACCATTGTTT+AGG + tig0039690:8589-8608 Msa1458680:intergenic 40.0%
AACCATCATCTGTTGTTGCA+AGG - tig0039690:8701-8720 Msa1458680:CDS 40.0%
TTCCTTGCAACAACAGATGA+TGG + tig0039690:8706-8725 Msa1458680:intergenic 40.0%
GTCAGAAATCAGTCTTCTGT+TGG - tig0039690:8755-8774 Msa1458680:CDS 40.0%
! AAAGCACTAGCAGGAAATTC+AGG + tig0039690:8881-8900 Msa1458680:intergenic 40.0%
TTTCCAGACGAAAAGTCAAC+TGG + tig0039690:8989-9008 Msa1458680:intergenic 40.0%
! AAACACAATCACTGCTGCTT+TGG - tig0039690:9006-9025 Msa1458680:intron 40.0%
AATTCCCAATCAAGCCATCT+TGG + tig0039690:9057-9076 Msa1458680:intergenic 40.0%
CTGTGAGTTCAAAGGATTGA+AGG + tig0039690:9158-9177 Msa1458680:intergenic 40.0%
CTTCAATCCTTTGAACTCAC+AGG - tig0039690:9156-9175 Msa1458680:intron 40.0%
GAACAAACCTGTGAGTTCAA+AGG + tig0039690:9166-9185 Msa1458680:intergenic 40.0%
AGAATTTGTCAATGCCCTAC+TGG + tig0039690:9188-9207 Msa1458680:intergenic 40.0%
! TGCTGCAGACTGTTTTACTT+TGG + tig0039690:9228-9247 Msa1458680:intergenic 40.0%
ACGAGAATTTCTCAACTTCG+GGG + tig0039690:9312-9331 Msa1458680:intergenic 40.0%
GACGAGAATTTCTCAACTTC+GGG + tig0039690:9313-9332 Msa1458680:intergenic 40.0%
! TCCCAAGTTGGATATGTTGA+GGG - tig0039690:9382-9401 Msa1458680:CDS 40.0%
ACCCTCAACATATCCAACTT+GGG + tig0039690:9386-9405 Msa1458680:intergenic 40.0%
AACCCTCAACATATCCAACT+TGG + tig0039690:9387-9406 Msa1458680:intergenic 40.0%
! GTTGGATATGTTGAGGGTTT+TGG - tig0039690:9388-9407 Msa1458680:CDS 40.0%
TGCACCCATTATGTCTTCTA+AGG + tig0039690:9416-9435 Msa1458680:intergenic 40.0%
AGATGGGTGTGGAGAATCAA+AGG - tig0039690:6254-6273 Msa1458680:three_prime_UTR 45.0%
CACGCATACCAACAGGAAAA+CGG + tig0039690:6303-6322 Msa1458680:intergenic 45.0%
CCCAACTTGTCTCAAAGTCT+TGG - tig0039690:6342-6361 Msa1458680:CDS 45.0%
!! GCCAAGACTTTGAGACAAGT+TGG + tig0039690:6346-6365 Msa1458680:intergenic 45.0%
! GACTTTTGCCCTATGAAGCT+TGG - tig0039690:6694-6713 Msa1458680:CDS 45.0%
GTCATGTGTCCAAGCTTCAT+AGG + tig0039690:6706-6725 Msa1458680:intergenic 45.0%
! TATTATACGTGTCGGCGTGT+AGG + tig0039690:6754-6773 Msa1458680:intergenic 45.0%
!! TGTCCGTGCTTGATAGCTTT+TGG - tig0039690:6852-6871 Msa1458680:CDS 45.0%
GAGCCAAAAGCTATCAAGCA+CGG + tig0039690:6858-6877 Msa1458680:intergenic 45.0%
TGACCTGGTTATCAGTGATG+TGG - tig0039690:7046-7065 Msa1458680:CDS 45.0%
TAGCCACATCACTGATAACC+AGG + tig0039690:7052-7071 Msa1458680:intergenic 45.0%
!! GTATTCAAGGGTGTTACCCA+TGG - tig0039690:7285-7304 Msa1458680:CDS 45.0%
CAGATAGTCACATGCACCAT+GGG + tig0039690:7304-7323 Msa1458680:intergenic 45.0%
CTAAGCTCTTCAAGTCGAAC+AGG + tig0039690:7333-7352 Msa1458680:intergenic 45.0%
!! GGAAGCCTTGTTATCATCCT+TGG + tig0039690:7397-7416 Msa1458680:intergenic 45.0%
CAAGGCTTCCAATGAGGATA+AGG - tig0039690:7407-7426 Msa1458680:CDS 45.0%
GCTGATCGGAATAAAAGGCT+CGG - tig0039690:7477-7496 Msa1458680:CDS 45.0%
! AAGGCTCGGTAAAAGAAGGA+AGG - tig0039690:7491-7510 Msa1458680:CDS 45.0%
AAGAAGGAAGGAGCAAGATG+AGG - tig0039690:7503-7522 Msa1458680:CDS 45.0%
GAGGTTTCTTCTGTGATGAC+GGG + tig0039690:7593-7612 Msa1458680:intergenic 45.0%
CGAGGTTTCTTCTGTGATGA+CGG + tig0039690:7594-7613 Msa1458680:intergenic 45.0%
ATCACAGAAGAAACCTCGTG+TGG - tig0039690:7596-7615 Msa1458680:intron 45.0%
AGAAGAAACCTCGTGTGGTT+TGG - tig0039690:7601-7620 Msa1458680:intron 45.0%
!! CAAGTCTCAAAAGCGTCAAG+AGG + tig0039690:8068-8087 Msa1458680:intergenic 45.0%
AACTCCCCATCATACTAGCA+TGG - tig0039690:8268-8287 Msa1458680:CDS 45.0%
GCAACCATGCTAGTATGATG+GGG + tig0039690:8275-8294 Msa1458680:intergenic 45.0%
CAGCAACCATGCTAGTATGA+TGG + tig0039690:8277-8296 Msa1458680:intergenic 45.0%
CATCATACTAGCATGGTTGC+TGG - tig0039690:8275-8294 Msa1458680:CDS 45.0%
GATTCTTACCTTCGGATGAG+TGG - tig0039690:8314-8333 Msa1458680:CDS 45.0%
CATCTATTCCACTCATCCGA+AGG + tig0039690:8325-8344 Msa1458680:intergenic 45.0%
CTTCGGATGAGTGGAATAGA+TGG - tig0039690:8323-8342 Msa1458680:CDS 45.0%
! TATCCATCGAGCGGAGTTTT+CGG - tig0039690:8407-8426 Msa1458680:CDS 45.0%
!! GCTTTGATTTGCAGGAATCC+AGG + tig0039690:8522-8541 Msa1458680:intergenic 45.0%
TGAAGCAGTTGCAAATCCAG+TGG + tig0039690:8636-8655 Msa1458680:intergenic 45.0%
TCACAACAGACACACAATGC+AGG - tig0039690:8728-8747 Msa1458680:CDS 45.0%
CACAACAGACACACAATGCA+GGG - tig0039690:8729-8748 Msa1458680:CDS 45.0%
TTCTGTTGGATCTGCTTCCT+TGG - tig0039690:8769-8788 Msa1458680:intron 45.0%
TCTGTTGGATCTGCTTCCTT+GGG - tig0039690:8770-8789 Msa1458680:intron 45.0%
ATTTCCTGCTAGTGCTTTGC+CGG - tig0039690:8883-8902 Msa1458680:intron 45.0%
TGTTAGCGATAAGAGGGCTT+TGG + tig0039690:8964-8983 Msa1458680:intergenic 45.0%
CTGGACTGTTAGCGATAAGA+GGG + tig0039690:8970-8989 Msa1458680:intergenic 45.0%
ACTGGACTGTTAGCGATAAG+AGG + tig0039690:8971-8990 Msa1458680:intergenic 45.0%
!! AGTCCAGTTGACTTTTCGTC+TGG - tig0039690:8983-9002 Msa1458680:intron 45.0%
ATCAAGCCATCTTGGCATCT+CGG + tig0039690:9049-9068 Msa1458680:intergenic 45.0%
AGATGCCAAGATGGCTTGAT+TGG - tig0039690:9049-9068 Msa1458680:intron 45.0%
GATGCCAAGATGGCTTGATT+GGG - tig0039690:9050-9069 Msa1458680:intron 45.0%
TTATGCTCCGCGACAAAACT+GGG - tig0039690:9093-9112 Msa1458680:intron 45.0%
!! TTTTCTGCCCAGTTTTGTCG+CGG + tig0039690:9103-9122 Msa1458680:intergenic 45.0%
!!! CTCGTGTTTTGGCTGTAATC+CGG + tig0039690:9130-9149 Msa1458680:intergenic 45.0%
! ACTCACAGGTTTGTTCCAGT+AGG - tig0039690:9170-9189 Msa1458680:intron 45.0%
! CTCACAGGTTTGTTCCAGTA+GGG - tig0039690:9171-9190 Msa1458680:intron 45.0%
! TTTCTCAACTTCGGGGTACT+GGG + tig0039690:9305-9324 Msa1458680:intergenic 45.0%
ATTTCTCAACTTCGGGGTAC+TGG + tig0039690:9306-9325 Msa1458680:intergenic 45.0%
CACGAATGATGCCTACAAGT+TGG - tig0039690:9348-9367 Msa1458680:intron 45.0%
CCTCATCTTCTCCAACTTGT+AGG + tig0039690:9362-9381 Msa1458680:intergenic 45.0%
! CCTACAAGTTGGAGAAGATG+AGG - tig0039690:9359-9378 Msa1458680:intron 45.0%
! GTCCCAAGTTGGATATGTTG+AGG - tig0039690:9381-9400 Msa1458680:CDS 45.0%
! GTCGTTGACCGTTTTCCTGT+TGG - tig0039690:6292-6311 Msa1458680:three_prime_UTR 50.0%
GCAAGAACACGCATACCAAC+AGG + tig0039690:6310-6329 Msa1458680:intergenic 50.0%
TTCGATTAGGCATGTCCCAG+TGG - tig0039690:6533-6552 Msa1458680:CDS 50.0%
TGGACACATGACACGAACAG+CGG - tig0039690:6714-6733 Msa1458680:CDS 50.0%
TATCAAGCACGGACACTCCT+CGG + tig0039690:6847-6866 Msa1458680:intergenic 50.0%
TGATGTGGCTATGCCTGACA+TGG - tig0039690:7061-7080 Msa1458680:CDS 50.0%
CACTGTATCCCGACAACACT+AGG + tig0039690:7254-7273 Msa1458680:intergenic 50.0%
CCAGATAGTCACATGCACCA+TGG + tig0039690:7305-7324 Msa1458680:intergenic 50.0%
CCATGGTGCATGTGACTATC+TGG - tig0039690:7302-7321 Msa1458680:CDS 50.0%
AAGGAAGGAGCAAGATGAGG+AGG - tig0039690:7506-7525 Msa1458680:CDS 50.0%
TACTAGCATGGTTGCTGGAC+TGG - tig0039690:8280-8299 Msa1458680:CDS 50.0%
ACTAGCATGGTTGCTGGACT+GGG - tig0039690:8281-8300 Msa1458680:CDS 50.0%
TTTGGCACCTCAACCAGATC+TGG - tig0039690:8356-8375 Msa1458680:CDS 50.0%
GATCCTTCCAGATCTGGTTG+AGG + tig0039690:8366-8385 Msa1458680:intergenic 50.0%
CGATGGATATGACGGCAATG+TGG + tig0039690:8396-8415 Msa1458680:intergenic 50.0%
TTGCCGTCATATCCATCGAG+CGG - tig0039690:8398-8417 Msa1458680:CDS 50.0%
ACTCCGCTCGATGGATATGA+CGG + tig0039690:8404-8423 Msa1458680:intergenic 50.0%
!! CACAATCACTGCTGCTTTGG+AGG - tig0039690:9009-9028 Msa1458680:intron 50.0%
TTGGCATCTCGGCACATTTC+TGG + tig0039690:9038-9057 Msa1458680:intergenic 50.0%
AATGTGCCGAGATGCCAAGA+TGG - tig0039690:9040-9059 Msa1458680:intron 50.0%
TGTCGCGGAGCATAACTTGA+AGG + tig0039690:9088-9107 Msa1458680:intergenic 50.0%
GTTATGCTCCGCGACAAAAC+TGG - tig0039690:9092-9111 Msa1458680:intron 50.0%
! TGAAGGGACGACTCGTGTTT+TGG + tig0039690:9141-9160 Msa1458680:intergenic 50.0%
GAGAAGATGAGGTCCCAAGT+TGG - tig0039690:9370-9389 Msa1458680:intron 50.0%
GACACGTGTCTGACACCACT+GGG + tig0039690:6551-6570 Msa1458680:intergenic 55.0%
GTGGCTATGCCTGACATGGA+TGG - tig0039690:7065-7084 Msa1458680:CDS 55.0%
! GAGAGTGAAGGGAGTGCAGA+TGG - tig0039690:7555-7574 Msa1458680:intron 55.0%
! AGGGAGTGCAGATGGAGATG+AGG - tig0039690:7563-7582 Msa1458680:intron 55.0%
TCAGGAGACCAAACCACACG+AGG + tig0039690:7612-7631 Msa1458680:intergenic 55.0%
GCACCTCAACCAGATCTGGA+AGG - tig0039690:8360-8379 Msa1458680:CDS 55.0%
GCTTGCGATCCTTCCAGATC+TGG + tig0039690:8372-8391 Msa1458680:intergenic 55.0%
CTACCGAAAACTCCGCTCGA+TGG + tig0039690:8413-8432 Msa1458680:intergenic 55.0%
! CATCGAGCGGAGTTTTCGGT+AGG - tig0039690:8411-8430 Msa1458680:CDS 55.0%
GGTAGGCTGAATTCTCCAGC+CGG - tig0039690:8428-8447 Msa1458680:CDS 55.0%
! CATACCGGCAAAGCACTAGC+AGG + tig0039690:8890-8909 Msa1458680:intergenic 55.0%
CGACACGTGTCTGACACCAC+TGG + tig0039690:6552-6571 Msa1458680:intergenic 60.0%
GGCGTGTAGGTGTCTGTGTC+TGG + tig0039690:6741-6760 Msa1458680:intergenic 60.0%
!! TGTCGGTGTCGGACGACATC+TGG - tig0039690:6810-6829 Msa1458680:CDS 60.0%
! AGCATGGTTGCTGGACTGGG+CGG - tig0039690:8284-8303 Msa1458680:CDS 60.0%
CCTCTCATGTTCAAGCCGGC+TGG + tig0039690:8446-8465 Msa1458680:intergenic 60.0%
!! CCAGCCGGCTTGAACATGAG+AGG - tig0039690:8443-8462 Msa1458680:CDS 60.0%
! ATGGTTGCTGGACTGGGCGG+CGG - tig0039690:8287-8306 Msa1458680:CDS 65.0%
!! GGGGTACTGGGCAACTGACG+TGG + tig0039690:9293-9312 Msa1458680:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0039690 gene 5963 9804 5963 ID=Msa1458680;Name=Msa1458680
tig0039690 mRNA 5963 9804 5963 ID=Msa1458680-mRNA-1;Parent=Msa1458680;Name=Msa1458680-mRNA-1;_AED=0.05;_eAED=0.05;_QI=209|1|1|1|0.8|0.83|6|351|667
tig0039690 exon 5963 7525 5963 ID=Msa1458680-mRNA-1:exon:21886;Parent=Msa1458680-mRNA-1
tig0039690 exon 7886 7962 7886 ID=Msa1458680-mRNA-1:exon:21885;Parent=Msa1458680-mRNA-1
tig0039690 exon 8089 8511 8089 ID=Msa1458680-mRNA-1:exon:21884;Parent=Msa1458680-mRNA-1
tig0039690 exon 8630 8782 8630 ID=Msa1458680-mRNA-1:exon:21883;Parent=Msa1458680-mRNA-1
tig0039690 exon 9373 9511 9373 ID=Msa1458680-mRNA-1:exon:21882;Parent=Msa1458680-mRNA-1
tig0039690 exon 9596 9804 9596 ID=Msa1458680-mRNA-1:exon:21881;Parent=Msa1458680-mRNA-1
tig0039690 five_prime_UTR 9596 9804 9596 ID=Msa1458680-mRNA-1:five_prime_utr;Parent=Msa1458680-mRNA-1
tig0039690 CDS 9373 9511 9373 ID=Msa1458680-mRNA-1:cds;Parent=Msa1458680-mRNA-1
tig0039690 CDS 8630 8782 8630 ID=Msa1458680-mRNA-1:cds;Parent=Msa1458680-mRNA-1
tig0039690 CDS 8089 8511 8089 ID=Msa1458680-mRNA-1:cds;Parent=Msa1458680-mRNA-1
tig0039690 CDS 7886 7962 7886 ID=Msa1458680-mRNA-1:cds;Parent=Msa1458680-mRNA-1
tig0039690 CDS 6314 7525 6314 ID=Msa1458680-mRNA-1:cds;Parent=Msa1458680-mRNA-1
tig0039690 three_prime_UTR 5963 6313 5963 ID=Msa1458680-mRNA-1:three_prime_utr;Parent=Msa1458680-mRNA-1
Gene Sequence

>Msa1458680

ATGGGTGTGGAGAATCAAAGGAGAGATGAAGATGGGGTCGTTGACCGTTTTCCTGTTGGTATGCGTGTTCTTGCTGTTGATGACAACCCAACTTGTCTCAAAGTCTTGGCTAAACTTCTTGCTGAATGCAAATATCATGTTACTACAGCTACTAATGGATTTGATGCACTAAAAATGTTGAGGGAAAACAGAAAGAACTATGACCTGGTTATCAGTGATGTGGCTATGCCTGACATGGATGGATTTAAGTTGCTTGAATTGGTAGGACTTGAAATGGACTTACCTGTCATCATGTTGTCGGGATACAGTGATACAAGTATGGTATTCAAGGGTGTTACCCATGGTGCATGTGACTATCTGGTGAAACCTGTTCGACTTGAAGAGCTTAGAAACATATGGCAACATGTAATCCGAAAGAAAAAAACTAATTCCAAGGATGATAACAAGGCTTCCAATGAGGATAAGGTCCCTAATATTTCTGGTGGAAGCAATCAGAACATATTGGAGAACAGTGCTGATCGGAATAAAAGGCTCGGTAAAAGAAGGAAGGAGCAAGATGAGGAGGAGAAAGAAGAAGAAGAAGATGATGAAGAGAGTGAAGGGAGTGCAGATGGAGATGAGGATGACCCGTCATCACAGAAGAAACCTCGTGTGGTTTGGTCTCCTGATTTGCATAAGAAATTTGTTTGTGCTGTTAATCAACTTGGTGCAGACAGGGCTGTTCCGAAGAAAATACTTGAGCTGATGAATATTGAAGGGATTACCAGAGAAAATGTAGCAAGCCATTTGCAGAAATATAGACTCTATCTGAAAAAGGCAACTCCCCATCATACTAGCATGGTTGCTGGACTGGGCGGCGGTAATGATTCTTACCTTCGGATGAGTGGAATAGATGGATATGCAGACTTTGGCACCTCAACCAGATCTGGAAGGATCGCAAGCACCACATTGCCGTCATATCCATCGAGCGGAGTTTTCGGTAGGCTGAATTCTCCAGCCGGCTTGAACATGAGAGGAATTAATTCTTCAACACTGATTCAGCCTGTTCAGTCTCAAAACATCAACAACTCCTGGATTCCTGCAAATCAAAGCTCAAGCTTATTACATGGCGTTCCAACCGAGCTTAACCAATCTAACCTAAACAATGGTGCAACTGGTATATCGCAGTTAAATCAAATAGATTCCACTGGATTTGCAACTGCTTCAGACTTTCAAGATAGTAGGGCTATTACTAGTTCTAATCAAGTCTCAAACCATCATCTGTTGTTGCAAGGAAATTCACAACAGACACACAATGCAGGGTCAGTCAGAAATCAGTCTTCTGTTGGATCTGCTTCCTTGGGAAACAGAAACATTACTATTGGCGGTTCTTCTAATTTTTTGGATTATAATCGGTGTAGTGAAAACTGGCAAAGTCAAGCTCAGTTACCTGAATTTCCTGCTAGTGCTTTGCCGGTATGCAAGTCTTTCAATAACGACCAACTGCCTCTCAATAACATTACTGCTTTTAACCAAAGCCCTCTTATCGCTAACAGTCCAGTTGACTTTTCGTCTGGAAACACAATCACTGCTGCTTTGGAGGAAGCCAGAAATGTGCCGAGATGCCAAGATGGCTTGATTGGGAATTTTATACAGCCTTCAAGTTATGCTCCGCGACAAAACTGGGCAGAAAATAAACCGGATTACAGCCAAAACACGAGTCGTCCCTTCAATCCTTTGAACTCACAGGTTTGTTCCAGTAGGGCATTGACAAATTCTGCGTCTCACAATATCAACCAAAGTAAAACAGTCTGCAGCAATAGAGTTGATGCATCTTTTGTTGATCATGTATATGGCGCTTCCACGTCAGTTGCCCAGTACCCCGAAGTTGAGAAATTCTCGTCAGACGTACAAGTCAACACGAATGATGCCTACAAGTTGGAGAAGATGAGGTCCCAAGTTGGATATGTTGAGGGTTTTGGAACCTTAGAAGACATAATGGGTGCAATAGTCAAAAGGGTATGA

Protein sequence

>Msa1458680

MGVENQRRDEDGVVDRFPVGMRVLAVDDNPTCLKVLAKLLAECKYHVTTATNGFDALKMLRENRKNYDLVISDVAMPDMDGFKLLELVGLEMDLPVIMLSGYSDTSMVFKGVTHGACDYLVKPVRLEELRNIWQHVIRKKKTNSKDDNKASNEDKVPNISGGSNQNILENSADRNKRLGKRRKEQDEEEKEEEEDDEESEGSADGDEDDPSSQKKPRVVWSPDLHKKFVCAVNQLGADRAVPKKILELMNIEGITRENVASHLQKYRLYLKKATPHHTSMVAGLGGGNDSYLRMSGIDGYADFGTSTRSGRIASTTLPSYPSSGVFGRLNSPAGLNMRGINSSTLIQPVQSQNINNSWIPANQSSSLLHGVPTELNQSNLNNGATGISQLNQIDSTGFATASDFQDSRAITSSNQVSNHHLLLQGNSQQTHNAGSVRNQSSVGSASLGNRNITIGGSSNFLDYNRCSENWQSQAQLPEFPASALPVCKSFNNDQLPLNNITAFNQSPLIANSPVDFSSGNTITAALEEARNVPRCQDGLIGNFIQPSSYAPRQNWAENKPDYSQNTSRPFNPLNSQVCSSRALTNSASHNINQSKTVCSNRVDASFVDHVYGASTSVAQYPEVEKFSSDVQVNTNDAYKLEKMRSQVGYVEGFGTLEDIMGAIVKRV*