Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0578920 | XP_013456820.1 | 96.837 | 411 | 13 | 0 | 1 | 411 | 1 | 411 | 0.0 | 824 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0578920 | sp|Q39221|STLP2_ARATH | 49.492 | 394 | 184 | 7 | 9 | 400 | 11 | 391 | 2.81e-112 | 337 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0578920 | A0A072UND0 | 96.837 | 411 | 13 | 0 | 1 | 411 | 1 | 411 | 0.0 | 824 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003890 | Msa0578920 | 0.802317 | 5.941734e-49 | -8.615850e-47 |
Msa0006110 | Msa0578920 | 0.820763 | 5.776236e-53 | -8.615850e-47 |
Msa0006390 | Msa0578920 | 0.801377 | 9.265274e-49 | -8.615850e-47 |
Msa0026430 | Msa0578920 | 0.822050 | 2.914159e-53 | -8.615850e-47 |
Msa0026910 | Msa0578920 | 0.849555 | 2.998916e-60 | -8.615850e-47 |
Msa0035120 | Msa0578920 | 0.804834 | 1.785719e-49 | -8.615850e-47 |
Msa0043980 | Msa0578920 | 0.809220 | 2.107275e-50 | -8.615850e-47 |
Msa0044090 | Msa0578920 | 0.815828 | 7.567214e-52 | -8.615850e-47 |
Msa0051630 | Msa0578920 | 0.827001 | 1.990751e-54 | -8.615850e-47 |
Msa0051740 | Msa0578920 | 0.819526 | 1.108878e-52 | -8.615850e-47 |
Msa0056450 | Msa0578920 | 0.812735 | 3.650385e-51 | -8.615850e-47 |
Msa0061340 | Msa0578920 | 0.826158 | 3.162093e-54 | -8.615850e-47 |
Msa0064110 | Msa0578920 | 0.801593 | 8.369949e-49 | -8.615850e-47 |
Msa0089980 | Msa0578920 | 0.818993 | 1.466297e-52 | -8.615850e-47 |
Msa0090010 | Msa0578920 | 0.816153 | 6.403225e-52 | -8.615850e-47 |
Msa0101750 | Msa0578920 | 0.807726 | 4.390266e-50 | -8.615850e-47 |
Msa0103770 | Msa0578920 | 0.808647 | 2.794072e-50 | -8.615850e-47 |
Msa0106620 | Msa0578920 | 0.832001 | 1.212485e-55 | -8.615850e-47 |
Msa0106710 | Msa0578920 | 0.822833 | 1.916659e-53 | -8.615850e-47 |
Msa0124320 | Msa0578920 | 0.833112 | 6.430184e-56 | -8.615850e-47 |
Msa0152400 | Msa0578920 | 0.814739 | 1.321568e-51 | -8.615850e-47 |
Msa0178570 | Msa0578920 | 0.817973 | 2.497726e-52 | -8.615850e-47 |
Msa0179190 | Msa0578920 | 0.804294 | 2.314399e-49 | -8.615850e-47 |
Msa0183760 | Msa0578920 | 0.807370 | 5.225671e-50 | -8.615850e-47 |
Msa0188590 | Msa0578920 | 0.804063 | 2.586244e-49 | -8.615850e-47 |
Msa0189040 | Msa0578920 | 0.805792 | 1.125133e-49 | -8.615850e-47 |
Msa0204770 | Msa0578920 | 0.810052 | 1.395843e-50 | -8.615850e-47 |
Msa0204840 | Msa0578920 | 0.823337 | 1.462280e-53 | -8.615850e-47 |
Msa0206010 | Msa0578920 | 0.808944 | 2.414320e-50 | -8.615850e-47 |
Msa0211150 | Msa0578920 | 0.802952 | 4.395097e-49 | -8.615850e-47 |
Msa0218460 | Msa0578920 | 0.806889 | 6.606980e-50 | -8.615850e-47 |
Msa0219590 | Msa0578920 | 0.832986 | 6.911237e-56 | -8.615850e-47 |
Msa0220730 | Msa0578920 | 0.836621 | 8.406930e-57 | -8.615850e-47 |
Msa0225220 | Msa0578920 | 0.805564 | 1.256213e-49 | -8.615850e-47 |
Msa0367870 | Msa0578920 | 0.805131 | 1.548160e-49 | -8.615850e-47 |
Msa0385590 | Msa0578920 | 0.816704 | 4.821774e-52 | -8.615850e-47 |
Msa0389910 | Msa0578920 | 0.820400 | 6.997432e-53 | -8.615850e-47 |
Msa0394140 | Msa0578920 | 0.804395 | 2.204932e-49 | -8.615850e-47 |
Msa0395980 | Msa0578920 | 0.810226 | 1.280497e-50 | -8.615850e-47 |
Msa0405130 | Msa0578920 | 0.801879 | 7.310361e-49 | -8.615850e-47 |
Msa0406770 | Msa0578920 | 0.804181 | 2.443643e-49 | -8.615850e-47 |
Msa0411390 | Msa0578920 | 0.835082 | 2.063896e-56 | -8.615850e-47 |
Msa0417330 | Msa0578920 | 0.802239 | 6.165805e-49 | -8.615850e-47 |
Msa0430750 | Msa0578920 | 0.806352 | 8.575688e-50 | -8.615850e-47 |
Msa0432160 | Msa0578920 | 0.823040 | 1.715573e-53 | -8.615850e-47 |
Msa0450400 | Msa0578920 | -0.829642 | 4.591877e-55 | -8.615850e-47 |
Msa0455760 | Msa0578920 | 0.842480 | 2.520783e-58 | -8.615850e-47 |
Msa0468250 | Msa0578920 | 0.804822 | 1.796245e-49 | -8.615850e-47 |
Msa0468270 | Msa0578920 | 0.810908 | 9.123439e-51 | -8.615850e-47 |
Msa0471550 | Msa0578920 | 0.836117 | 1.129225e-56 | -8.615850e-47 |
Msa0471580 | Msa0578920 | 0.832660 | 8.328852e-56 | -8.615850e-47 |
Msa0471670 | Msa0578920 | 0.811765 | 5.944781e-51 | -8.615850e-47 |
Msa0476680 | Msa0578920 | 0.821055 | 4.947778e-53 | -8.615850e-47 |
Msa0481970 | Msa0578920 | 0.807727 | 4.387770e-50 | -8.615850e-47 |
Msa0249100 | Msa0578920 | 0.801522 | 8.654093e-49 | -8.615850e-47 |
Msa0251270 | Msa0578920 | 0.848000 | 8.098908e-60 | -8.615850e-47 |
Msa0260780 | Msa0578920 | 0.816047 | 6.761317e-52 | -8.615850e-47 |
Msa0284350 | Msa0578920 | 0.801874 | 7.326611e-49 | -8.615850e-47 |
Msa0292930 | Msa0578920 | 0.812252 | 4.654187e-51 | -8.615850e-47 |
Msa0307310 | Msa0578920 | 0.810483 | 1.127028e-50 | -8.615850e-47 |
Msa0315690 | Msa0578920 | 0.804206 | 2.414319e-49 | -8.615850e-47 |
Msa0326110 | Msa0578920 | 0.810313 | 1.226408e-50 | -8.615850e-47 |
Msa0328390 | Msa0578920 | 0.800992 | 1.110970e-48 | -8.615850e-47 |
Msa0331000 | Msa0578920 | 0.806267 | 8.937500e-50 | -8.615850e-47 |
Msa0336290 | Msa0578920 | 0.803818 | 2.907049e-49 | -8.615850e-47 |
Msa0347950 | Msa0578920 | 0.803598 | 3.229982e-49 | -8.615850e-47 |
Msa0348530 | Msa0578920 | 0.821520 | 3.865403e-53 | -8.615850e-47 |
Msa0358400 | Msa0578920 | 0.820123 | 8.099147e-53 | -8.615850e-47 |
Msa0360210 | Msa0578920 | 0.805833 | 1.102736e-49 | -8.615850e-47 |
Msa0363790 | Msa0578920 | 0.827769 | 1.302660e-54 | -8.615850e-47 |
Msa0484650 | Msa0578920 | 0.809674 | 1.683860e-50 | -8.615850e-47 |
Msa0516170 | Msa0578920 | 0.804250 | 2.363838e-49 | -8.615850e-47 |
Msa0521010 | Msa0578920 | 0.822321 | 2.521936e-53 | -8.615850e-47 |
Msa0521270 | Msa0578920 | 0.813838 | 2.089527e-51 | -8.615850e-47 |
Msa0526020 | Msa0578920 | 0.807274 | 5.475595e-50 | -8.615850e-47 |
Msa0530560 | Msa0578920 | 0.809059 | 2.281708e-50 | -8.615850e-47 |
Msa0531180 | Msa0578920 | 0.817589 | 3.048993e-52 | -8.615850e-47 |
Msa0560500 | Msa0578920 | 0.807124 | 5.890841e-50 | -8.615850e-47 |
Msa0578920 | Msa0581400 | 0.818338 | 2.064612e-52 | -8.615850e-47 |
Msa0578920 | Msa0588090 | 0.804457 | 2.140846e-49 | -8.615850e-47 |
Msa0578920 | Msa0607910 | 0.818634 | 1.769088e-52 | -8.615850e-47 |
Msa0578920 | Msa0610840 | -0.817880 | 2.621283e-52 | -8.615850e-47 |
Msa0578920 | Msa0610880 | 0.994257 | 8.518520e-206 | -8.615850e-47 |
Msa0578920 | Msa0615010 | 0.800764 | 1.236899e-48 | -8.615850e-47 |
Msa0578920 | Msa0620910 | 0.802607 | 5.176573e-49 | -8.615850e-47 |
Msa0578920 | Msa0624470 | 0.837931 | 3.885210e-57 | -8.615850e-47 |
Msa0578920 | Msa0651560 | 0.811862 | 5.660832e-51 | -8.615850e-47 |
Msa0578920 | Msa0652060 | 0.802639 | 5.098752e-49 | -8.615850e-47 |
Msa0578920 | Msa0657750 | 0.806763 | 7.024682e-50 | -8.615850e-47 |
Msa0578920 | Msa0661320 | 0.816634 | 4.997287e-52 | -8.615850e-47 |
Msa0578920 | Msa0664540 | 0.806605 | 7.583557e-50 | -8.615850e-47 |
Msa0578920 | Msa0669410 | 0.833669 | 4.671206e-56 | -8.615850e-47 |
Msa0578920 | Msa0673120 | 0.835627 | 1.503083e-56 | -8.615850e-47 |
Msa0578920 | Msa0681250 | 0.855024 | 8.325368e-62 | -8.615850e-47 |
Msa0578920 | Msa0681270 | 0.848602 | 5.520862e-60 | -8.615850e-47 |
Msa0578920 | Msa0685090 | 0.810880 | 9.250325e-51 | -8.615850e-47 |
Msa0578920 | Msa0685750 | 0.814829 | 1.262457e-51 | -8.615850e-47 |
Msa0578920 | Msa0717890 | 0.820522 | 6.560031e-53 | -8.615850e-47 |
Msa0578920 | Msa0726040 | 0.819929 | 8.970667e-53 | -8.615850e-47 |
Msa0578920 | Msa0731940 | 0.802211 | 6.248555e-49 | -8.615850e-47 |
Msa0578920 | Msa0741070 | 0.813774 | 2.158729e-51 | -8.615850e-47 |
Msa0578920 | Msa0755120 | 0.805466 | 1.317249e-49 | -8.615850e-47 |
Msa0578920 | Msa0756380 | 0.843443 | 1.396714e-58 | -8.615850e-47 |
Msa0578920 | Msa0763890 | 0.801860 | 7.377847e-49 | -8.615850e-47 |
Msa0578920 | Msa0763920 | 0.800277 | 1.554515e-48 | -8.615850e-47 |
Msa0578920 | Msa0766580 | 0.804579 | 2.018873e-49 | -8.615850e-47 |
Msa0578920 | Msa0797770 | 0.820866 | 5.468836e-53 | -8.615850e-47 |
Msa0578920 | Msa0797930 | 0.822403 | 2.413930e-53 | -8.615850e-47 |
Msa0578920 | Msa0800210 | 0.831635 | 1.492841e-55 | -8.615850e-47 |
Msa0578920 | Msa0801670 | 0.801409 | 9.128275e-49 | -8.615850e-47 |
Msa0578920 | Msa0808100 | 0.829453 | 5.104113e-55 | -8.615850e-47 |
Msa0578920 | Msa0818060 | 0.807274 | 5.476244e-50 | -8.615850e-47 |
Msa0578920 | Msa0832340 | 0.847810 | 9.135721e-60 | -8.615850e-47 |
Msa0578920 | Msa0835230 | 0.821116 | 4.791641e-53 | -8.615850e-47 |
Msa0578920 | Msa0835960 | 0.825437 | 4.690682e-54 | -8.615850e-47 |
Msa0578920 | Msa0842710 | 0.826284 | 2.951086e-54 | -8.615850e-47 |
Msa0578920 | Msa0844570 | 0.807681 | 4.488620e-50 | -8.615850e-47 |
Msa0578920 | Msa0849030 | 0.802063 | 6.700479e-49 | -8.615850e-47 |
Msa0578920 | Msa0855870 | 0.805515 | 1.286373e-49 | -8.615850e-47 |
Msa0578920 | Msa0858130 | 0.802978 | 4.340163e-49 | -8.615850e-47 |
Msa0578920 | Msa0868160 | 0.812710 | 3.697020e-51 | -8.615850e-47 |
Msa0578920 | Msa0898750 | 0.803697 | 3.080415e-49 | -8.615850e-47 |
Msa0578920 | Msa0899970 | 0.813259 | 2.801706e-51 | -8.615850e-47 |
Msa0578920 | Msa0901930 | 0.819576 | 1.080039e-52 | -8.615850e-47 |
Msa0578920 | Msa0921000 | 0.800353 | 1.499531e-48 | -8.615850e-47 |
Msa0578920 | Msa0933100 | 0.803508 | 3.371488e-49 | -8.615850e-47 |
Msa0578920 | Msa0933760 | 0.843577 | 1.286269e-58 | -8.615850e-47 |
Msa0578920 | Msa0934140 | 0.817053 | 4.026175e-52 | -8.615850e-47 |
Msa0578920 | Msa0936390 | 0.819175 | 1.333399e-52 | -8.615850e-47 |
Msa0578920 | Msa0953120 | 0.801684 | 8.016089e-49 | -8.615850e-47 |
Msa0578920 | Msa0964310 | 0.807562 | 4.758437e-50 | -8.615850e-47 |
Msa0578920 | Msa0964900 | 0.802633 | 5.114654e-49 | -8.615850e-47 |
Msa0578920 | Msa0965290 | 0.814812 | 1.273218e-51 | -8.615850e-47 |
Msa0578920 | Msa0969520 | 0.801651 | 8.143456e-49 | -8.615850e-47 |
Msa0578920 | Msa0986510 | 0.803394 | 3.560367e-49 | -8.615850e-47 |
Msa0578920 | Msa0999680 | 0.807920 | 3.993347e-50 | -8.615850e-47 |
Msa0578920 | Msa1002360 | 0.843112 | 1.711593e-58 | -8.615850e-47 |
Msa0578920 | Msa1004800 | 0.800964 | 1.125548e-48 | -8.615850e-47 |
Msa0578920 | Msa1010390 | 0.813293 | 2.754301e-51 | -8.615850e-47 |
Msa0578920 | Msa1032850 | 0.804186 | 2.437110e-49 | -8.615850e-47 |
Msa0578920 | Msa1034200 | 0.819142 | 1.356480e-52 | -8.615850e-47 |
Msa0578920 | Msa1034500 | 0.824507 | 7.774205e-54 | -8.615850e-47 |
Msa0578920 | Msa1041670 | 0.836546 | 8.781444e-57 | -8.615850e-47 |
Msa0578920 | Msa1075650 | 0.835288 | 1.830764e-56 | -8.615850e-47 |
Msa0578920 | Msa1081330 | 0.826283 | 2.953282e-54 | -8.615850e-47 |
Msa0578920 | Msa1103990 | 0.806409 | 8.342454e-50 | -8.615850e-47 |
Msa0578920 | Msa1105650 | 0.816584 | 5.128885e-52 | -8.615850e-47 |
Msa0578920 | Msa1108760 | 0.812669 | 3.774769e-51 | -8.615850e-47 |
Msa0578920 | Msa1119940 | 0.801023 | 1.094630e-48 | -8.615850e-47 |
Msa0578920 | Msa1122150 | 0.807029 | 6.172164e-50 | -8.615850e-47 |
Msa0578920 | Msa1135470 | 0.806471 | 8.096690e-50 | -8.615850e-47 |
Msa0578920 | Msa1137570 | 0.830573 | 2.722220e-55 | -8.615850e-47 |
Msa0578920 | Msa1143850 | 0.804152 | 2.477800e-49 | -8.615850e-47 |
Msa0578920 | Msa1147740 | 0.833839 | 4.235682e-56 | -8.615850e-47 |
Msa0578920 | Msa1166560 | 0.837024 | 6.634507e-57 | -8.615850e-47 |
Msa0578920 | Msa1188710 | 0.808978 | 2.374198e-50 | -8.615850e-47 |
Msa0578920 | Msa1189070 | 0.827078 | 1.908605e-54 | -8.615850e-47 |
Msa0578920 | Msa1190920 | 0.835038 | 2.117720e-56 | -8.615850e-47 |
Msa0578920 | Msa1193290 | 0.801176 | 1.018525e-48 | -8.615850e-47 |
Msa0578920 | Msa1199570 | 0.816743 | 4.725547e-52 | -8.615850e-47 |
Msa0578920 | Msa1221330 | 0.807559 | 4.763827e-50 | -8.615850e-47 |
Msa0578920 | Msa1223870 | 0.800634 | 1.314386e-48 | -8.615850e-47 |
Msa0578920 | Msa1226270 | 0.801459 | 8.915368e-49 | -8.615850e-47 |
Msa0578920 | Msa1236440 | 0.800865 | 1.179473e-48 | -8.615850e-47 |
Msa0578920 | Msa1243490 | 0.808389 | 3.172327e-50 | -8.615850e-47 |
Msa0578920 | Msa1248830 | 0.803952 | 2.727181e-49 | -8.615850e-47 |
Msa0578920 | Msa1250530 | 0.805649 | 1.205287e-49 | -8.615850e-47 |
Msa0578920 | Msa1263060 | 0.801298 | 9.618448e-49 | -8.615850e-47 |
Msa0578920 | Msa1276660 | 0.814102 | 1.828112e-51 | -8.615850e-47 |
Msa0578920 | Msa1283740 | 0.811862 | 5.660832e-51 | -8.615850e-47 |
Msa0578920 | Msa1284550 | 0.802570 | 5.269640e-49 | -8.615850e-47 |
Msa0578920 | Msa1284680 | 0.801144 | 1.034358e-48 | -8.615850e-47 |
Msa0578920 | Msa1285550 | 0.809479 | 1.853977e-50 | -8.615850e-47 |
Msa0578920 | Msa1297290 | 0.807636 | 4.589367e-50 | -8.615850e-47 |
Msa0578920 | Msa1325410 | -0.837873 | 4.020728e-57 | -8.615850e-47 |
Msa0578920 | Msa1328710 | 0.809856 | 1.538629e-50 | -8.615850e-47 |
Msa0578920 | Msa1333480 | 0.828221 | 1.013966e-54 | -8.615850e-47 |
Msa0578920 | Msa1340200 | 0.804441 | 2.156822e-49 | -8.615850e-47 |
Msa0578920 | Msa1353470 | 0.810962 | 8.880524e-51 | -8.615850e-47 |
Msa0578920 | Msa1368430 | 0.805411 | 1.352119e-49 | -8.615850e-47 |
Msa0578920 | Msa1372240 | 0.818104 | 2.332663e-52 | -8.615850e-47 |
Msa0578920 | Msa1372760 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
Msa0578920 | Msa1378410 | 0.800649 | 1.305090e-48 | -8.615850e-47 |
Msa0578920 | Msa1385000 | 0.803974 | 2.697749e-49 | -8.615850e-47 |
Msa0578920 | Msa1390670 | 0.804584 | 2.013994e-49 | -8.615850e-47 |
Msa0578920 | Msa1392880 | 0.806366 | 8.518220e-50 | -8.615850e-47 |
Msa0578920 | Msa1400120 | 0.801206 | 1.004434e-48 | -8.615850e-47 |
Msa0578920 | Msa1401270 | 0.802452 | 5.573850e-49 | -8.615850e-47 |
Msa0578920 | Msa1402400 | 0.830778 | 2.424383e-55 | -8.615850e-47 |
Msa0578920 | Msa1426710 | 0.810071 | 1.382802e-50 | -8.615850e-47 |
Msa0578920 | Msa1435270 | 0.815952 | 7.102316e-52 | -8.615850e-47 |
Msa0578920 | Msa1448640 | 0.844476 | 7.384340e-59 | -8.615850e-47 |
Msa0578920 | Msa1452710 | 0.828936 | 6.815217e-55 | -8.615850e-47 |
Msa0578920 | Msa1454870 | 0.906266 | 1.782379e-80 | -8.615850e-47 |
Msa0578920 | Msa1458770 | 0.831258 | 1.848472e-55 | -8.615850e-47 |
Msa0578920 | Msa1462360 | 0.803088 | 4.119562e-49 | -8.615850e-47 |
Msa0578920 | Msa1466540 | 0.803944 | 2.736837e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0578920 | MtrunA17_Chr4g0043971 | 96.837 | 411 | 13 | 0 | 1 | 411 | 1 | 411 | 0.0 | 824 |
Msa0578920 | MtrunA17_Chr1g0197641 | 32.239 | 335 | 208 | 9 | 72 | 398 | 30 | 353 | 7.70e-50 | 173 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0578920 | AT2G01470.1 | 49.492 | 394 | 184 | 7 | 9 | 400 | 11 | 391 | 2.85e-113 | 337 |
Msa0578920 | AT5G50650.1 | 48.564 | 383 | 174 | 8 | 1 | 382 | 1 | 361 | 1.83e-110 | 330 |
Msa0578920 | AT5G50550.1 | 48.564 | 383 | 174 | 8 | 1 | 382 | 1 | 361 | 1.83e-110 | 330 |
Msa0578920 | AT3G52190.1 | 29.674 | 337 | 221 | 7 | 64 | 393 | 27 | 354 | 3.23e-42 | 153 |
Find 117 sgRNAs with CRISPR-Local
Find 575 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCAGCTGATGGAAAGTTTC+TGG | 0.216501 | 4_1:+83578926 | Msa0578920:CDS |
GTGGCGGCCCCTGCAGGGTT+TGG | 0.223489 | 4_1:+83576561 | Msa0578920:CDS |
TGGGAGGTGGCGGCCCCTGC+AGG | 0.245520 | 4_1:+83576555 | Msa0578920:CDS |
TGGCAAGTTGATTGTCTCTT+TGG | 0.248816 | 4_1:+83576535 | Msa0578920:CDS |
AATTGTTTGGGATATCAATT+TGG | 0.285256 | 4_1:+83581165 | Msa0578920:three_prime_UTR |
CAATCATGAGTAAAATTGTT+TGG | 0.285270 | 4_1:+83581152 | Msa0578920:three_prime_UTR |
TTCTTCAGGTTCGAAGGGTC+TGG | 0.285342 | 4_1:-83573090 | None:intergenic |
TTCATTACAAACCTTGAATC+AGG | 0.290274 | 4_1:-83579921 | None:intergenic |
ATTATGGTGTTAAATTGTTA+TGG | 0.295755 | 4_1:+83581102 | Msa0578920:three_prime_UTR |
TTCCCATGTTTGTGTATTCC+AGG | 0.301485 | 4_1:-83578853 | None:intergenic |
TGCAAAATATATACCTGTTC+TGG | 0.301923 | 4_1:-83578745 | None:intergenic |
TGGCGGCCCCTGCAGGGTTT+GGG | 0.305184 | 4_1:+83576562 | Msa0578920:CDS |
CATTACAGGATGGCAGTCTA+AGG | 0.306362 | 4_1:+83576266 | Msa0578920:intron |
TGCCCGAGCAACACAGAATT+AGG | 0.307606 | 4_1:-83573306 | None:intergenic |
CTCTGTAGATTGTATAATTA+TGG | 0.316112 | 4_1:+83581086 | Msa0578920:three_prime_UTR |
AAGGAACGCCGTATTTCTTC+AGG | 0.327746 | 4_1:-83573104 | None:intergenic |
GGCAAACACGACGTACTTTC+CGG | 0.330888 | 4_1:-83573253 | None:intergenic |
TTTCAATTCCTTCAACCTTC+AGG | 0.340231 | 4_1:-83580881 | None:intergenic |
GGCAAGTTGATTGTCTCTTT+GGG | 0.342939 | 4_1:+83576536 | Msa0578920:CDS |
TCCTTTATACTCCGTTGCTT+GGG | 0.350058 | 4_1:+83573122 | Msa0578920:CDS |
AATCATGAGTAAAATTGTTT+GGG | 0.352241 | 4_1:+83581153 | Msa0578920:three_prime_UTR |
CAAATAATGCCTTCTCCGTT+GGG | 0.363852 | 4_1:-83573662 | None:intergenic |
TTCCTTTATACTCCGTTGCT+TGG | 0.367492 | 4_1:+83573121 | Msa0578920:CDS |
ACAATTACAATATCTCCTTC+AGG | 0.370620 | 4_1:-83579822 | None:intergenic |
TGGAAAAGCCAAAGTGTTGC+AGG | 0.370641 | 4_1:+83573690 | Msa0578920:CDS |
GGAAAGTACGTCGTGTTTGC+CGG | 0.376827 | 4_1:+83573255 | Msa0578920:CDS |
GAGACATTGAATGCACATAT+TGG | 0.384246 | 4_1:-83578906 | None:intergenic |
GGCTTCTATATTCAGGGCAT+TGG | 0.384344 | 4_1:+83580003 | Msa0578920:intron |
CTATATATTGCTGCCAGAAC+AGG | 0.392636 | 4_1:+83578732 | Msa0578920:CDS |
GTTGTCCAACATTATCCAAC+TGG | 0.393760 | 4_1:-83575355 | None:intergenic |
GCGTCAATTGCTTCCGTCTC+CGG | 0.394671 | 4_1:-83573231 | None:intergenic |
CTGTTCTGGCAGCAATATAT+AGG | 0.411746 | 4_1:-83578731 | None:intergenic |
GTCGTGTTTGCCGGTGGCGG+TGG | 0.413598 | 4_1:+83573264 | Msa0578920:CDS |
TTCTGAGTGGTTGTACCATT+GGG | 0.413763 | 4_1:+83581041 | Msa0578920:three_prime_UTR |
GGGTGAAGTGCCATTCTATA+AGG | 0.419923 | 4_1:-83573641 | None:intergenic |
ACAAATAATGCCTTCTCCGT+TGG | 0.423444 | 4_1:-83573663 | None:intergenic |
GGGAGGTGGCGGCCCCTGCA+GGG | 0.426848 | 4_1:+83576556 | Msa0578920:CDS |
TCTTCAGGTTCGAAGGGTCT+GGG | 0.434306 | 4_1:-83573089 | None:intergenic |
ACCCAAGCAACGGAGTATAA+AGG | 0.435918 | 4_1:-83573123 | None:intergenic |
GGCATTGGCTTCTGTATCCA+TGG | 0.443307 | 4_1:+83580018 | Msa0578920:CDS |
TTCCGAGTTGCCTTATAGAA+TGG | 0.446113 | 4_1:+83573631 | Msa0578920:CDS |
ATTCCTAATTCTGTGTTGCT+CGG | 0.447796 | 4_1:+83573303 | Msa0578920:CDS |
TCATAAATCTTCGCCGGAGA+CGG | 0.463175 | 4_1:+83573218 | Msa0578920:CDS |
GCTTACTTCCTGAAGGTTGA+AGG | 0.465391 | 4_1:+83580873 | Msa0578920:CDS |
TTCCTAATTCTGTGTTGCTC+GGG | 0.466232 | 4_1:+83573304 | Msa0578920:CDS |
TTGATTGTCTCTTTGGGAGG+TGG | 0.468915 | 4_1:+83576542 | Msa0578920:CDS |
ATTCTGAGTGGTTGTACCAT+TGG | 0.471625 | 4_1:+83581040 | Msa0578920:three_prime_UTR |
TGTCTGTCTTGCAGTTCTGA+TGG | 0.472254 | 4_1:+83576515 | Msa0578920:intron |
ATTGTAGAAATATTTACTGC+TGG | 0.478308 | 4_1:+83580929 | Msa0578920:exon |
GCACATGCAGATGGTTTGAC+TGG | 0.489183 | 4_1:+83575270 | Msa0578920:intron |
AAAGAAGACCTGCAACACTT+TGG | 0.491375 | 4_1:-83573698 | None:intergenic |
CCGTATTTCTTCAGGTTCGA+AGG | 0.492140 | 4_1:-83573096 | None:intergenic |
GAATGCTGAAATTCACAAGT+TGG | 0.497117 | 4_1:+83575304 | Msa0578920:CDS |
ATATTTCAGGTGTTTAAGCT+AGG | 0.498331 | 4_1:+83573602 | Msa0578920:intron |
TACGTCGTGTTTGCCGGTGG+CGG | 0.499692 | 4_1:+83573261 | Msa0578920:CDS |
GCATTGGCATTCAACAATGA+TGG | 0.500116 | 4_1:+83575383 | Msa0578920:CDS |
CGGGCATTTCGATGTTGCAT+CGG | 0.507244 | 4_1:+83573323 | Msa0578920:CDS |
AATGCTGAAATTCACAAGTT+GGG | 0.510662 | 4_1:+83575305 | Msa0578920:CDS |
AATTCACAAGTTGGGTCTGA+AGG | 0.511078 | 4_1:+83575313 | Msa0578920:CDS |
AGAGAAGCTTCTCACCCAGT+TGG | 0.514272 | 4_1:+83575340 | Msa0578920:CDS |
TACCCTCGCACTTGAATCCA+TGG | 0.515086 | 4_1:-83580035 | None:intergenic |
CTCACCCAGTTGGATAATGT+TGG | 0.517477 | 4_1:+83575350 | Msa0578920:CDS |
TTTATGATCGGCAGCATCGT+CGG | 0.517957 | 4_1:-83573202 | None:intergenic |
AGAAACATCCCAAACCCTGC+AGG | 0.518415 | 4_1:-83576570 | None:intergenic |
TTTAAGGAGGAGGACTGAGC+TGG | 0.530683 | 4_1:+83580814 | Msa0578920:intron |
TCAAACAAAGGATGGGACTC+AGG | 0.539755 | 4_1:+83578707 | Msa0578920:CDS |
ATTGTCTCTTTGGGAGGTGG+CGG | 0.541675 | 4_1:+83576545 | Msa0578920:CDS |
CCTTCGAACCTGAAGAAATA+CGG | 0.542571 | 4_1:+83573096 | Msa0578920:CDS |
GCGGCTATCTCCACCGCCAC+CGG | 0.547245 | 4_1:-83573274 | None:intergenic |
TGTTGGACAACAATTAGCAT+TGG | 0.547834 | 4_1:+83575367 | Msa0578920:CDS |
TCATTACAAACCTTGAATCA+GGG | 0.548645 | 4_1:-83579920 | None:intergenic |
AGAAGGCATTATTTGTGCAA+TGG | 0.551687 | 4_1:+83573670 | Msa0578920:CDS |
CGTATTTCTTCAGGTTCGAA+GGG | 0.557599 | 4_1:-83573095 | None:intergenic |
GCACTTCACCCCAACGGAGA+AGG | 0.558496 | 4_1:+83573653 | Msa0578920:CDS |
AATAGCTGCTTACTTCCTGA+AGG | 0.563268 | 4_1:+83580866 | Msa0578920:CDS |
TTATACAATCTACAGAGCAT+TGG | 0.565341 | 4_1:-83581080 | None:intergenic |
GCATTCAATGTCTCAGCTGA+TGG | 0.568791 | 4_1:+83578915 | Msa0578920:CDS |
CAATGCTCATTCTACTGTGA+AGG | 0.569819 | 4_1:+83576330 | Msa0578920:CDS |
GAAACATCCCAAACCCTGCA+GGG | 0.570028 | 4_1:-83576569 | None:intergenic |
CACATGCAGATGGTTTGACT+GGG | 0.572817 | 4_1:+83575271 | Msa0578920:intron |
GCGATTTGAGAATGGATTGT+GGG | 0.575042 | 4_1:-83573146 | None:intergenic |
AAGGAGGAGGACTGAGCTGG+TGG | 0.586192 | 4_1:+83580817 | Msa0578920:intron |
CATTACAAACCTTGAATCAG+GGG | 0.586918 | 4_1:-83579919 | None:intergenic |
CTTCACAGTAGAATGAGCAT+TGG | 0.587615 | 4_1:-83576329 | None:intergenic |
GGATTCTCTCTCTGATCCAC+CGG | 0.588348 | 4_1:+83573344 | Msa0578920:CDS |
TACACTAGCTGCTGGTGGAG+AGG | 0.593622 | 4_1:+83575409 | Msa0578920:CDS |
AGTAAGCAGCTATTGCAAGT+AGG | 0.596054 | 4_1:-83580857 | None:intergenic |
ATTACAGGATGGCAGTCTAA+GGG | 0.596584 | 4_1:+83576267 | Msa0578920:intron |
ATATGCAGCGGAACACCTGA+AGG | 0.596958 | 4_1:+83579807 | Msa0578920:intron |
TGACCTGGAATACACAAACA+TGG | 0.596985 | 4_1:+83578850 | Msa0578920:CDS |
AAGTACGTCGTGTTTGCCGG+TGG | 0.600942 | 4_1:+83573258 | Msa0578920:CDS |
GTCGGAGGAATGATCATCAT+CGG | 0.601246 | 4_1:-83573184 | None:intergenic |
AAGTTGATTGTCTCTTTGGG+AGG | 0.601665 | 4_1:+83576539 | Msa0578920:CDS |
ATCCATGGATTCAAGTGCGA+GGG | 0.604094 | 4_1:+83580033 | Msa0578920:CDS |
TGCCGATCATAAATCTTCGC+CGG | 0.604371 | 4_1:+83573212 | Msa0578920:CDS |
GATGGTACTACACTAGCTGC+TGG | 0.619769 | 4_1:+83575401 | Msa0578920:CDS |
AGCGATTTGAGAATGGATTG+TGG | 0.621404 | 4_1:-83573147 | None:intergenic |
CTGATGGAAAGTTTCTGGCA+TGG | 0.623936 | 4_1:+83578931 | Msa0578920:CDS |
CTCCGGCGAAGATTTATGAT+CGG | 0.625230 | 4_1:-83573214 | None:intergenic |
TGCCATTCTATAAGGCAACT+CGG | 0.627739 | 4_1:-83573633 | None:intergenic |
GGAATACACAAACATGGGAA+AGG | 0.627776 | 4_1:+83578856 | Msa0578920:CDS |
CTAAAGCAGTTACTACGCCA+AGG | 0.630301 | 4_1:-83579890 | None:intergenic |
AAATAATGCCTTCTCCGTTG+GGG | 0.636673 | 4_1:-83573661 | None:intergenic |
GACCTGGAATACACAAACAT+GGG | 0.637351 | 4_1:+83578851 | Msa0578920:CDS |
ATGATCGGCAGCATCGTCGG+AGG | 0.640539 | 4_1:-83573199 | None:intergenic |
GGATTGTGGGACCCAAGCAA+CGG | 0.641995 | 4_1:-83573133 | None:intergenic |
TTGTCCAACATTATCCAACT+GGG | 0.643522 | 4_1:-83575354 | None:intergenic |
AAACATCCCAAACCCTGCAG+GGG | 0.644586 | 4_1:-83576568 | None:intergenic |
GGCGGTGGAGATAGCCGCAG+TGG | 0.656943 | 4_1:+83573279 | Msa0578920:CDS |
GAGACGGAAGCAATTGACGC+CGG | 0.659922 | 4_1:+83573234 | Msa0578920:CDS |
TATCCATGGATTCAAGTGCG+AGG | 0.661757 | 4_1:+83580032 | Msa0578920:CDS |
GAGACATTATCATATCCCAA+TGG | 0.664860 | 4_1:-83581056 | None:intergenic |
AGAATGGCACTTCACCCCAA+CGG | 0.669541 | 4_1:+83573647 | Msa0578920:CDS |
GGTACTACACTAGCTGCTGG+TGG | 0.673466 | 4_1:+83575404 | Msa0578920:CDS |
AACCTTACTCGACTAGACGG+AGG | 0.719530 | 4_1:+83572945 | None:intergenic |
GGAGGAATGATCATCATCGG+CGG | 0.741993 | 4_1:-83573181 | None:intergenic |
CAGAATTAGGAATACCACTG+CGG | 0.790181 | 4_1:-83573293 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAAAATTTAAGAGTTTA+AGG | + | chr4_1:83577963-83577982 | Msa0578920:intron | 10.0% |
!!! | ATAAGTAAATTTTTTTTTGT+AGG | + | chr4_1:83578024-83578043 | Msa0578920:intron | 10.0% |
!!! | TAAGTAAATTTTTTTTTGTA+GGG | + | chr4_1:83578025-83578044 | Msa0578920:intron | 10.0% |
!! | TTTACTTTATTATAAATGTT+GGG | - | chr4_1:83578498-83578517 | None:intergenic | 10.0% |
!!! | TTTTACTTTATTATAAATGT+TGG | - | chr4_1:83578499-83578518 | None:intergenic | 10.0% |
!! | TTATTTATTTAATATCATGT+TGG | - | chr4_1:83580655-83580674 | None:intergenic | 10.0% |
!! | TAAAATTATCAATGAAATAT+AGG | + | chr4_1:83580679-83580698 | Msa0578920:intron | 10.0% |
!!! | TTATATATTTTTATGGAATT+TGG | + | chr4_1:83581201-83581220 | Msa0578920:three_prime_UTR | 10.0% |
!! | AAGAAATATATAAAATGTAC+CGG | - | chr4_1:83573366-83573385 | None:intergenic | 15.0% |
!! | ACTATTTATATCTTATAGTT+AGG | - | chr4_1:83574539-83574558 | None:intergenic | 15.0% |
!! | AAACTATCAATACAATATTA+TGG | - | chr4_1:83574871-83574890 | None:intergenic | 15.0% |
!! | TATAGTTAGTTGTAAATATT+AGG | - | chr4_1:83575224-83575243 | None:intergenic | 15.0% |
!! | CTTCATTTATATGAATTTAA+AGG | - | chr4_1:83575444-83575463 | None:intergenic | 15.0% |
!! | TGAAGTAAAAAGATAATTTA+TGG | + | chr4_1:83575503-83575522 | Msa0578920:intron | 15.0% |
!! | ACAAAAATACAAATATCATA+TGG | - | chr4_1:83576245-83576264 | None:intergenic | 15.0% |
!! | TATTTAGTCTATTTATAAAC+AGG | + | chr4_1:83576788-83576807 | Msa0578920:intron | 15.0% |
!!! | TTTTTTTATGATATCCTAAA+GGG | + | chr4_1:83577565-83577584 | Msa0578920:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | - | chr4_1:83577640-83577659 | None:intergenic | 15.0% |
!! | AAGCATAAATTAAACAAATT+TGG | - | chr4_1:83577712-83577731 | None:intergenic | 15.0% |
!!! | TTTTTCAACAATTTTTTTAC+AGG | + | chr4_1:83577743-83577762 | Msa0578920:intron | 15.0% |
!! | ATATTAAGAACGTTATTAAA+AGG | + | chr4_1:83577767-83577786 | Msa0578920:intron | 15.0% |
!! | AGATATAAGTAACAAAAATA+TGG | - | chr4_1:83577832-83577851 | None:intergenic | 15.0% |
!!! | TAAACAAAATTTATTTTAGC+AGG | + | chr4_1:83577991-83578010 | Msa0578920:intron | 15.0% |
!!! | AAACAAAATTTATTTTAGCA+GGG | + | chr4_1:83577992-83578011 | Msa0578920:intron | 15.0% |
!! | AAAGCTATTAAAATTAAGTA+AGG | + | chr4_1:83578054-83578073 | Msa0578920:intron | 15.0% |
!! | GTATTAATTAGAATTATGTT+TGG | + | chr4_1:83578356-83578375 | Msa0578920:intron | 15.0% |
!!! | TTATTGTTTTGTATAGATAA+AGG | + | chr4_1:83578813-83578832 | Msa0578920:intron | 15.0% |
!! | TTGATTTACAGATTTATAAA+TGG | + | chr4_1:83580135-83580154 | Msa0578920:intron | 15.0% |
!! | AATAAAAAATTATGAAAGTG+TGG | + | chr4_1:83580400-83580419 | Msa0578920:intron | 15.0% |
!!! | ATATGTTTTTTCTTGTTTTA+AGG | + | chr4_1:83580798-83580817 | Msa0578920:intron | 15.0% |
!! | AGTAACTTTATCAATATTTC+AGG | + | chr4_1:83573589-83573608 | Msa0578920:intron | 20.0% |
!!! | ACATAAAAAAGGCTATATTT+TGG | - | chr4_1:83574151-83574170 | None:intergenic | 20.0% |
!!! | TTTAGGATATAAGATTGAAT+TGG | + | chr4_1:83574328-83574347 | Msa0578920:intron | 20.0% |
!! | TGATAGTTTATACTAACAAA+TGG | + | chr4_1:83574882-83574901 | Msa0578920:intron | 20.0% |
!! | TTAGTTGTAAATATTAGGTT+GGG | - | chr4_1:83575219-83575238 | None:intergenic | 20.0% |
!!! | TTTTATTCTTTGTTCAACTA+AGG | + | chr4_1:83575553-83575572 | Msa0578920:intron | 20.0% |
!! | ATGTCTATTACAAATGAATT+GGG | - | chr4_1:83575781-83575800 | None:intergenic | 20.0% |
!! | TATGTCTATTACAAATGAAT+TGG | - | chr4_1:83575782-83575801 | None:intergenic | 20.0% |
!!! | CAAGTTACAATTTAATTTGT+CGG | - | chr4_1:83575991-83576010 | None:intergenic | 20.0% |
!! | TTTCACTTAATTGATACTAT+TGG | + | chr4_1:83576392-83576411 | Msa0578920:intron | 20.0% |
!!! | ATAAATCTTGTTATTTCTGA+TGG | + | chr4_1:83576472-83576491 | Msa0578920:intron | 20.0% |
!!! | AGAAGTTATTTTTGATTTGA+TGG | + | chr4_1:83576660-83576679 | Msa0578920:intron | 20.0% |
!!! | GTTTCAAAACATACTTTTAT+TGG | + | chr4_1:83577222-83577241 | Msa0578920:intron | 20.0% |
!!! | TTCATTTGCTTTATATTTTC+TGG | + | chr4_1:83577251-83577270 | Msa0578920:intron | 20.0% |
!! | TAATGATGATTGTTACTAAT+TGG | + | chr4_1:83577465-83577484 | Msa0578920:intron | 20.0% |
!!! | GTTTTTTTATGATATCCTAA+AGG | + | chr4_1:83577564-83577583 | Msa0578920:intron | 20.0% |
!!! | TTTTTTATGATATCCTAAAG+GGG | + | chr4_1:83577566-83577585 | Msa0578920:intron | 20.0% |
!! | TGAATACTTCTAAACATAAA+GGG | - | chr4_1:83578302-83578321 | None:intergenic | 20.0% |
!! | TTGAATACTTCTAAACATAA+AGG | - | chr4_1:83578303-83578322 | None:intergenic | 20.0% |
!!! | ATGTTTAGAAGTATTCAATA+TGG | + | chr4_1:83578305-83578324 | Msa0578920:intron | 20.0% |
!!! | TTAATACTACTAATTTGCTT+TGG | - | chr4_1:83578343-83578362 | None:intergenic | 20.0% |
!! | GTTCATGAATTCTTTATATT+TGG | + | chr4_1:83578398-83578417 | Msa0578920:intron | 20.0% |
!!! | TTTTGTATAGATAAAGGTTT+TGG | + | chr4_1:83578819-83578838 | Msa0578920:intron | 20.0% |
!! | TAAGGATTAAATCAATCTAA+GGG | - | chr4_1:83579025-83579044 | None:intergenic | 20.0% |
!! | TAAGGATTAAATCAATCTAA+GGG | - | chr4_1:83579025-83579044 | None:intergenic | 20.0% |
!! | ATGTTTATTCTTTATTCTTC+TGG | + | chr4_1:83579618-83579637 | Msa0578920:intron | 20.0% |
!! | ATAATTGAAGAGAAGAAAAA+TGG | + | chr4_1:83580061-83580080 | Msa0578920:CDS | 20.0% |
!!! | ATATACAGCAGAATTTTTTT+AGG | - | chr4_1:83580582-83580601 | None:intergenic | 20.0% |
!! | GATATATATATTTCCACATT+TGG | + | chr4_1:83580715-83580734 | Msa0578920:intron | 20.0% |
!! | AAAAACATATCAGAAACAAT+GGG | - | chr4_1:83580788-83580807 | None:intergenic | 20.0% |
!! | AAAAAACATATCAGAAACAA+TGG | - | chr4_1:83580789-83580808 | None:intergenic | 20.0% |
!!! | ATTATGGTGTTAAATTGTTA+TGG | + | chr4_1:83581102-83581121 | Msa0578920:three_prime_UTR | 20.0% |
!! | AATCATGAGTAAAATTGTTT+GGG | + | chr4_1:83581153-83581172 | Msa0578920:three_prime_UTR | 20.0% |
!!! | AATTTGGTGTAATGATTTTA+TGG | + | chr4_1:83581217-83581236 | Msa0578920:three_prime_UTR | 20.0% |
!! | TTTTTCTGTTTGAAAGTGAA+TGG | - | chr4_1:83573036-83573055 | None:intergenic | 25.0% |
! | AAATATATAAAATGTACCGG+TGG | - | chr4_1:83573363-83573382 | None:intergenic | 25.0% |
! | TATTTCTTACGATTCTTGTT+AGG | + | chr4_1:83573378-83573397 | Msa0578920:intron | 25.0% |
! | TGAAAAATGAATAATCTGTG+AGG | + | chr4_1:83573432-83573451 | Msa0578920:intron | 25.0% |
! | GAATTAATTGTTACAATGTG+TGG | + | chr4_1:83573514-83573533 | Msa0578920:intron | 25.0% |
! | AATATGCAACATTAACTATC+TGG | - | chr4_1:83573765-83573784 | None:intergenic | 25.0% |
! | ACAGATAAAGAAAGAAAAGT+TGG | + | chr4_1:83573979-83573998 | Msa0578920:intron | 25.0% |
! | CTAGAAGATCAACATAAAAA+AGG | - | chr4_1:83574162-83574181 | None:intergenic | 25.0% |
!!! | CTTTTTTATGTTGATCTTCT+AGG | + | chr4_1:83574160-83574179 | Msa0578920:intron | 25.0% |
! | ATCTTATATCCTAAAGTACA+GGG | - | chr4_1:83574323-83574342 | None:intergenic | 25.0% |
! | AATCTTATATCCTAAAGTAC+AGG | - | chr4_1:83574324-83574343 | None:intergenic | 25.0% |
! | AAAAAGTTGGATTGACAAAT+CGG | + | chr4_1:83574451-83574470 | Msa0578920:intron | 25.0% |
! | TCTAAAAGTAGTTCATAAGA+AGG | - | chr4_1:83574697-83574716 | None:intergenic | 25.0% |
!!! | TTCTTATGAACTACTTTTAG+AGG | + | chr4_1:83574696-83574715 | Msa0578920:intron | 25.0% |
!!! | TCTTATGAACTACTTTTAGA+GGG | + | chr4_1:83574697-83574716 | Msa0578920:intron | 25.0% |
!! | TTCTTTTGCAATGTTACTAT+TGG | + | chr4_1:83574913-83574932 | Msa0578920:intron | 25.0% |
! | GTCTTATATTTAATCGATGT+GGG | - | chr4_1:83574950-83574969 | None:intergenic | 25.0% |
! | CCATATTAGGTCTTTATATT+TGG | - | chr4_1:83575039-83575058 | None:intergenic | 25.0% |
! | CCAAATATAAAGACCTAATA+TGG | + | chr4_1:83575036-83575055 | Msa0578920:intron | 25.0% |
! | ATAGACTATGATACCATATT+AGG | - | chr4_1:83575052-83575071 | None:intergenic | 25.0% |
! | GTTAGTTGTAAATATTAGGT+TGG | - | chr4_1:83575220-83575239 | None:intergenic | 25.0% |
! | ATTTAACACATGCACTTAAT+AGG | + | chr4_1:83575697-83575716 | Msa0578920:intron | 25.0% |
! | AGTATATGAAAAGTTAATCC+AGG | + | chr4_1:83575742-83575761 | Msa0578920:intron | 25.0% |
! | AAAGTTAATCCAGGTTATAA+TGG | + | chr4_1:83575751-83575770 | Msa0578920:intron | 25.0% |
! | AGGAAATCATATTTGTACTA+TGG | - | chr4_1:83575881-83575900 | None:intergenic | 25.0% |
! | ACAAATCAATCATATATCGA+CGG | - | chr4_1:83575935-83575954 | None:intergenic | 25.0% |
! | CAATTAAAGTTGAAGCAAAA+TGG | - | chr4_1:83576065-83576084 | None:intergenic | 25.0% |
!!! | AGGATTTTTTTTCTCTCTAT+AGG | + | chr4_1:83576125-83576144 | Msa0578920:intron | 25.0% |
!!! | TTTGTATTTTTGTGCATTAC+AGG | + | chr4_1:83576252-83576271 | Msa0578920:intron | 25.0% |
!! | CTTTTCCTTGAAGATTAATT+TGG | + | chr4_1:83576708-83576727 | Msa0578920:intron | 25.0% |
!!! | GATTAATTTGGCTTGAAATT+TGG | + | chr4_1:83576720-83576739 | Msa0578920:intron | 25.0% |
!!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr4_1:83576881-83576900 | Msa0578920:intron | 25.0% |
!! | TTTTCTAATGGTTTCTCTAA+TGG | - | chr4_1:83577016-83577035 | None:intergenic | 25.0% |
! | AACCATTAGAAAAGATTTAG+AGG | + | chr4_1:83577023-83577042 | Msa0578920:intron | 25.0% |
! | GTTCTATCAAAAACCATATT+TGG | - | chr4_1:83577063-83577082 | None:intergenic | 25.0% |
! | AGATAGATGACTTAATGTTA+TGG | + | chr4_1:83577310-83577329 | Msa0578920:intron | 25.0% |
! | CAAATTTAATCAGTTGAACT+GGG | - | chr4_1:83577514-83577533 | None:intergenic | 25.0% |
! | AAAACATAATTAACCCCTTT+AGG | - | chr4_1:83577582-83577601 | None:intergenic | 25.0% |
!! | AAAGGGGTTAATTATGTTTT+TGG | + | chr4_1:83577582-83577601 | Msa0578920:intron | 25.0% |
! | AAACAAATTTGGATTGAGTA+AGG | - | chr4_1:83577701-83577720 | None:intergenic | 25.0% |
!! | GATAGGGTTAAATATGTTTT+TGG | - | chr4_1:83578112-83578131 | None:intergenic | 25.0% |
!!! | TTTTAGGTTACTTTAGGATA+GGG | - | chr4_1:83578128-83578147 | None:intergenic | 25.0% |
!!! | TTTTTAGGTTACTTTAGGAT+AGG | - | chr4_1:83578129-83578148 | None:intergenic | 25.0% |
! | TATCCTAAAGTAACCTAAAA+AGG | + | chr4_1:83578128-83578147 | Msa0578920:intron | 25.0% |
!!! | ATACCTTTTTAGGTTACTTT+AGG | - | chr4_1:83578134-83578153 | None:intergenic | 25.0% |
! | TAAAGAATTCATGAACATGT+TGG | - | chr4_1:83578394-83578413 | None:intergenic | 25.0% |
!! | TCTTTCTTTTAACATCTAGT+TGG | + | chr4_1:83578519-83578538 | Msa0578920:intron | 25.0% |
! | AATCTAAGGGTCAATAATTA+GGG | - | chr4_1:83579012-83579031 | None:intergenic | 25.0% |
! | GTAAGGATTAAATCAATCTA+AGG | - | chr4_1:83579026-83579045 | None:intergenic | 25.0% |
! | AAAAAATCTAGCAATGTGTA+GGG | - | chr4_1:83579063-83579082 | None:intergenic | 25.0% |
! | AAAAAAATCTAGCAATGTGT+AGG | - | chr4_1:83579064-83579083 | None:intergenic | 25.0% |
! | GATGCAATATTTAGATCTAT+AGG | - | chr4_1:83579147-83579166 | None:intergenic | 25.0% |
! | AATCTAAGGGTCAATAATTA+GGG | - | chr4_1:83579012-83579031 | None:intergenic | 25.0% |
! | GTAAGGATTAAATCAATCTA+AGG | - | chr4_1:83579026-83579045 | None:intergenic | 25.0% |
! | AAAAAATCTTGCAATGTGTA+GGG | - | chr4_1:83579301-83579320 | None:intergenic | 25.0% |
! | AAAAAAATCTTGCAATGTGT+AGG | - | chr4_1:83579302-83579321 | None:intergenic | 25.0% |
! | AATGTAAACAGAAAAACTGT+CGG | - | chr4_1:83579118-83579137 | None:intergenic | 25.0% |
! | GATGCAATATTTAGATCTAT+AGG | - | chr4_1:83579147-83579166 | None:intergenic | 25.0% |
! | GGACAATTATTATTCACTAT+TGG | - | chr4_1:83579554-83579573 | None:intergenic | 25.0% |
! | GTAGCTTAAAAAAAAGACAA+TGG | - | chr4_1:83579658-83579677 | None:intergenic | 25.0% |
!!! | GAAACTTACATCTTTTGTTT+TGG | + | chr4_1:83579777-83579796 | Msa0578920:intron | 25.0% |
! | GATTCAGACAATGATAAAAA+AGG | + | chr4_1:83579863-83579882 | Msa0578920:CDS | 25.0% |
!!! | AGGTATTTTAGTCATAGTTT+TGG | + | chr4_1:83579982-83580001 | Msa0578920:intron | 25.0% |
! | GTATTTAAAAGGATTCCATA+GGG | + | chr4_1:83580249-83580268 | Msa0578920:intron | 25.0% |
!!! | TTCCTTATTTTTCTATCCAT+TGG | + | chr4_1:83580284-83580303 | Msa0578920:intron | 25.0% |
! | GAAGTAGCTTAAGTAAAATA+CGG | + | chr4_1:83580347-83580366 | Msa0578920:intron | 25.0% |
! | AAAACATATCAGAAACAATG+GGG | - | chr4_1:83580787-83580806 | None:intergenic | 25.0% |
!!! | TGTTTTTTCTTGTTTTAAGG+AGG | + | chr4_1:83580801-83580820 | Msa0578920:intron | 25.0% |
! | ATTGTAGAAATATTTACTGC+TGG | + | chr4_1:83580929-83580948 | Msa0578920:exon | 25.0% |
!!! | TTTGAAGCATTTCCATTTTT+GGG | + | chr4_1:83580983-83581002 | Msa0578920:three_prime_UTR | 25.0% |
! | CTCTGTAGATTGTATAATTA+TGG | + | chr4_1:83581086-83581105 | Msa0578920:three_prime_UTR | 25.0% |
! | CAATCATGAGTAAAATTGTT+TGG | + | chr4_1:83581152-83581171 | Msa0578920:three_prime_UTR | 25.0% |
!! | AATTGTTTGGGATATCAATT+TGG | + | chr4_1:83581165-83581184 | Msa0578920:three_prime_UTR | 25.0% |
! | ATATTTCAGGTGTTTAAGCT+AGG | + | chr4_1:83573602-83573621 | Msa0578920:intron | 30.0% |
! | TATCTGTGTTTCTGATAACT+TGG | - | chr4_1:83573966-83573985 | None:intergenic | 30.0% |
!! | CATGGATTTTATTTCTCTGT+TGG | - | chr4_1:83574045-83574064 | None:intergenic | 30.0% |
! | TTTATGTTGATCTTCTAGGA+TGG | + | chr4_1:83574164-83574183 | Msa0578920:intron | 30.0% |
!! | TTATGTTGATCTTCTAGGAT+GGG | + | chr4_1:83574165-83574184 | Msa0578920:intron | 30.0% |
AGTTCTATAACACTATCACT+AGG | + | chr4_1:83574269-83574288 | Msa0578920:intron | 30.0% | |
ACATCTTACAATACACACTA+CGG | - | chr4_1:83574398-83574417 | None:intergenic | 30.0% | |
TCGCTGTGTTTATTTATCAA+AGG | + | chr4_1:83574568-83574587 | Msa0578920:intron | 30.0% | |
!!! | AAAGGCAGTTTTATTGTTGA+CGG | + | chr4_1:83574586-83574605 | Msa0578920:intron | 30.0% |
AGAAGGAAAAGAAAAGTAGA+AGG | - | chr4_1:83574680-83574699 | None:intergenic | 30.0% | |
AGGAAATACAATGAGTTAGA+AGG | + | chr4_1:83574819-83574838 | Msa0578920:intron | 30.0% | |
! | GGTCTTATATTTAATCGATG+TGG | - | chr4_1:83574951-83574970 | None:intergenic | 30.0% |
CTAACTCATCCTTACAAAAT+TGG | - | chr4_1:83575015-83575034 | None:intergenic | 30.0% | |
TGAGTAGAGTTTATAAAGAG+TGG | + | chr4_1:83575151-83575170 | Msa0578920:intron | 30.0% | |
CTAACTCATCCTTACAAAAA+TGG | - | chr4_1:83575195-83575214 | None:intergenic | 30.0% | |
! | CATTTTTGTAAGGATGAGTT+AGG | + | chr4_1:83575193-83575212 | Msa0578920:intron | 30.0% |
AATGCTGAAATTCACAAGTT+GGG | + | chr4_1:83575305-83575324 | Msa0578920:CDS | 30.0% | |
AAGAAGATTCTGATGTAAGT+AGG | + | chr4_1:83575655-83575674 | Msa0578920:intron | 30.0% | |
! | TTGTAACTTGTAGCTTCAAA+AGG | + | chr4_1:83576001-83576020 | Msa0578920:intron | 30.0% |
AAATGGAACAGCAACATAAA+AGG | - | chr4_1:83576048-83576067 | None:intergenic | 30.0% | |
TTGCTTCAACTTTAATTGTG+TGG | + | chr4_1:83576067-83576086 | Msa0578920:intron | 30.0% | |
!! | TATTTTTGTGCATTACAGGA+TGG | + | chr4_1:83576256-83576275 | Msa0578920:intron | 30.0% |
! | TTGAGAATATTTTCCATGCT+AGG | - | chr4_1:83576304-83576323 | None:intergenic | 30.0% |
ATTGGACTTAATAATTCCCA+AGG | + | chr4_1:83576410-83576429 | Msa0578920:intron | 30.0% | |
!! | CTCAACTTTTTCTTTTCCTT+GGG | - | chr4_1:83576429-83576448 | None:intergenic | 30.0% |
!! | TCTCAACTTTTTCTTTTCCT+TGG | - | chr4_1:83576430-83576449 | None:intergenic | 30.0% |
GGAAAAGAAAAAGTTGAGAA+AGG | + | chr4_1:83576431-83576450 | Msa0578920:intron | 30.0% | |
TGAGAAAGGATAATAGATAG+AGG | + | chr4_1:83576445-83576464 | Msa0578920:intron | 30.0% | |
!! | TTGTTATTTCTGATGGATTG+TGG | + | chr4_1:83576479-83576498 | Msa0578920:intron | 30.0% |
AATAACTTCTTACACTAGTG+AGG | - | chr4_1:83576650-83576669 | None:intergenic | 30.0% | |
TCAAGCCAAATTAATCTTCA+AGG | - | chr4_1:83576716-83576735 | None:intergenic | 30.0% | |
! | TCTACCAACTTTTCTACTAT+AGG | - | chr4_1:83576877-83576896 | None:intergenic | 30.0% |
TTGATCTACTCTTCTTACAA+CGG | - | chr4_1:83576947-83576966 | None:intergenic | 30.0% | |
TGTAAGAAGAGTAGATCAAA+TGG | + | chr4_1:83576948-83576967 | Msa0578920:intron | 30.0% | |
! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr4_1:83577006-83577025 | None:intergenic | 30.0% |
! | GACCTCTAAATCTTTTCTAA+TGG | - | chr4_1:83577028-83577047 | None:intergenic | 30.0% |
! | TGGTTTTTGATAGAACACTA+TGG | + | chr4_1:83577067-83577086 | Msa0578920:intron | 30.0% |
CTATCTATGAAAGAACATGT+AGG | - | chr4_1:83577296-83577315 | None:intergenic | 30.0% | |
TGCAAAATGAGTCAAGTTTA+GGG | - | chr4_1:83577435-83577454 | None:intergenic | 30.0% | |
ATGCAAAATGAGTCAAGTTT+AGG | - | chr4_1:83577436-83577455 | None:intergenic | 30.0% | |
GCAAATTTAATCAGTTGAAC+TGG | - | chr4_1:83577515-83577534 | None:intergenic | 30.0% | |
GTTCAACTGATTAAATTTGC+TGG | + | chr4_1:83577515-83577534 | Msa0578920:intron | 30.0% | |
! | TACAAGGTTGCAATTTTGTA+GGG | - | chr4_1:83577609-83577628 | None:intergenic | 30.0% |
! | TTACAAGGTTGCAATTTTGT+AGG | - | chr4_1:83577610-83577629 | None:intergenic | 30.0% |
AAGTAAGGACTAAACTTACA+AGG | - | chr4_1:83577625-83577644 | None:intergenic | 30.0% | |
!!! | GAGTGCAGAAATTTTTTGTA+GGG | - | chr4_1:83577669-83577688 | None:intergenic | 30.0% |
!!! | TGAGTGCAGAAATTTTTTGT+AGG | - | chr4_1:83577670-83577689 | None:intergenic | 30.0% |
!!! | TTTTGCGATATTTTTTTCGC+AGG | - | chr4_1:83577794-83577813 | None:intergenic | 30.0% |
! | CAAGTTTAGAACACTATGAA+AGG | - | chr4_1:83577929-83577948 | None:intergenic | 30.0% |
AAGTAAGGACTAAACTTAGA+AGG | + | chr4_1:83578069-83578088 | Msa0578920:intron | 30.0% | |
! | TTAGAAGGTCGCAATTTTAT+AGG | + | chr4_1:83578084-83578103 | Msa0578920:intron | 30.0% |
! | TAGAAGGTCGCAATTTTATA+GGG | + | chr4_1:83578085-83578104 | Msa0578920:intron | 30.0% |
! | GTAACCTAAAAAGGTATAGA+AGG | + | chr4_1:83578137-83578156 | Msa0578920:intron | 30.0% |
! | TTCACCTTCTATACCTTTTT+AGG | - | chr4_1:83578144-83578163 | None:intergenic | 30.0% |
! | AAAAGGTATAGAAGGTGAAT+TGG | + | chr4_1:83578145-83578164 | Msa0578920:intron | 30.0% |
!! | GTTGTTGGCTCTAAAATATT+TGG | - | chr4_1:83578218-83578237 | None:intergenic | 30.0% |
ATACTTCAACGTGAATGTTT+AGG | - | chr4_1:83578432-83578451 | None:intergenic | 30.0% | |
AAACATTCACGTTGAAGTAT+TGG | + | chr4_1:83578432-83578451 | Msa0578920:intron | 30.0% | |
! | AACATTCACGTTGAAGTATT+GGG | + | chr4_1:83578433-83578452 | Msa0578920:intron | 30.0% |
GAAAAAATTCTTACTGCCTT+GGG | + | chr4_1:83578541-83578560 | Msa0578920:intron | 30.0% | |
AAAACATGGAAATCATATCG+AGG | - | chr4_1:83578586-83578605 | None:intergenic | 30.0% | |
! | TTGCAGATTTTCTCAAACAA+AGG | + | chr4_1:83578695-83578714 | Msa0578920:CDS | 30.0% |
! | AGATTTTCTCAAACAAAGGA+TGG | + | chr4_1:83578699-83578718 | Msa0578920:CDS | 30.0% |
! | GATTTTCTCAAACAAAGGAT+GGG | + | chr4_1:83578700-83578719 | Msa0578920:CDS | 30.0% |
TGCAAAATATATACCTGTTC+TGG | - | chr4_1:83578748-83578767 | None:intergenic | 30.0% | |
CATGGTACATATTTAGACTT+TGG | + | chr4_1:83578949-83578968 | Msa0578920:intron | 30.0% | |
TACATATTTAGACTTTGGCT+CGG | + | chr4_1:83578954-83578973 | Msa0578920:intron | 30.0% | |
CAATCTAAGGGTCAATAATT+AGG | - | chr4_1:83579013-83579032 | None:intergenic | 30.0% | |
GGGTACATAATATCATTGTA+AGG | - | chr4_1:83579043-83579062 | None:intergenic | 30.0% | |
CAATCTAAGGGTCAATAATT+AGG | - | chr4_1:83579013-83579032 | None:intergenic | 30.0% | |
GGGTACATAATATCATTGTA+AGG | - | chr4_1:83579043-83579062 | None:intergenic | 30.0% | |
! | AGAGAGTTGTTTAGAGATTT+TGG | + | chr4_1:83579479-83579498 | Msa0578920:intron | 30.0% |
! | GAGAGTTGTTTAGAGATTTT+GGG | + | chr4_1:83579480-83579499 | Msa0578920:intron | 30.0% |
!! | TAAACATGTAGCTGTTTCTA+TGG | - | chr4_1:83579605-83579624 | None:intergenic | 30.0% |
! | AAGTGATGACTTAACTTTTG+TGG | + | chr4_1:83579721-83579740 | Msa0578920:intron | 30.0% |
!!! | ACTTACATCTTTTGTTTTGG+TGG | + | chr4_1:83579780-83579799 | Msa0578920:intron | 30.0% |
ACAATTACAATATCTCCTTC+AGG | - | chr4_1:83579825-83579844 | None:intergenic | 30.0% | |
TCATTACAAACCTTGAATCA+GGG | - | chr4_1:83579923-83579942 | None:intergenic | 30.0% | |
TTCATTACAAACCTTGAATC+AGG | - | chr4_1:83579924-83579943 | None:intergenic | 30.0% | |
!!! | TAGTTTTGGCTTCTATATTC+AGG | + | chr4_1:83579996-83580015 | Msa0578920:intron | 30.0% |
!!! | AGTTTTGGCTTCTATATTCA+GGG | + | chr4_1:83579997-83580016 | Msa0578920:intron | 30.0% |
TGTAAATCAAGAACATGTGT+TGG | - | chr4_1:83580125-83580144 | None:intergenic | 30.0% | |
GATAGGAAAAAAGGATTACA+TGG | - | chr4_1:83580181-83580200 | None:intergenic | 30.0% | |
TATTAAATCACCAGACTGAT+AGG | - | chr4_1:83580198-83580217 | None:intergenic | 30.0% | |
GGTATTTAAAAGGATTCCAT+AGG | + | chr4_1:83580248-83580267 | Msa0578920:intron | 30.0% | |
CTCCAATGGATAGAAAAATA+AGG | - | chr4_1:83580289-83580308 | None:intergenic | 30.0% | |
!! | CTTATTTTTCTATCCATTGG+AGG | + | chr4_1:83580287-83580306 | Msa0578920:intron | 30.0% |
TAAGTAAAATACGGTAGCAT+TGG | + | chr4_1:83580356-83580375 | Msa0578920:intron | 30.0% | |
TTTCATACACTACTACCAAA+TGG | - | chr4_1:83580446-83580465 | None:intergenic | 30.0% | |
AACAGTCTAATACTAACATC+AGG | - | chr4_1:83580518-83580537 | None:intergenic | 30.0% | |
!! | AATGAGTCAACTTTTTCTGT+TGG | + | chr4_1:83580604-83580623 | Msa0578920:intron | 30.0% |
!!! | TTTTTCTTGTTTTAAGGAGG+AGG | + | chr4_1:83580804-83580823 | Msa0578920:intron | 30.0% |
CAAAAATGGAAATGCTTCAA+AGG | - | chr4_1:83580984-83581003 | None:intergenic | 30.0% | |
!!! | CTTTGAAGCATTTCCATTTT+TGG | + | chr4_1:83580982-83581001 | Msa0578920:three_prime_UTR | 30.0% |
!! | TTGAAGCATTTCCATTTTTG+GGG | + | chr4_1:83580984-83581003 | Msa0578920:three_prime_UTR | 30.0% |
! | TGTATTTTCATCATTCTGAG+TGG | + | chr4_1:83581028-83581047 | Msa0578920:three_prime_UTR | 30.0% |
TTATACAATCTACAGAGCAT+TGG | - | chr4_1:83581083-83581102 | None:intergenic | 30.0% | |
! | AAACTTTTCAAACGCGAGAA+TGG | + | chr4_1:83573053-83573072 | Msa0578920:exon | 35.0% |
! | AACTTTTCAAACGCGAGAAT+GGG | + | chr4_1:83573054-83573073 | Msa0578920:exon | 35.0% |
!!! | GTTTTGAAGCGATTTGAGAA+TGG | - | chr4_1:83573157-83573176 | None:intergenic | 35.0% |
! | ATTCCTAATTCTGTGTTGCT+CGG | + | chr4_1:83573303-83573322 | Msa0578920:CDS | 35.0% |
ATCTGTGAGGTTAGATGAAT+TGG | + | chr4_1:83573445-83573464 | Msa0578920:intron | 35.0% | |
AATTGGATCTGAGCTTGATT+AGG | + | chr4_1:83573462-83573481 | Msa0578920:intron | 35.0% | |
TGTGGAATCTGTTCTACATA+AGG | + | chr4_1:83573532-83573551 | Msa0578920:intron | 35.0% | |
!! | AGAAGGCATTATTTGTGCAA+TGG | + | chr4_1:83573670-83573689 | Msa0578920:CDS | 35.0% |
!! | TATTTTGAATGAGTGAAGCC+AGG | + | chr4_1:83573781-83573800 | Msa0578920:intron | 35.0% |
GTGTGTGTTTATTCGAGTAT+GGG | - | chr4_1:83573837-83573856 | None:intergenic | 35.0% | |
TGTGTGTGTTTATTCGAGTA+TGG | - | chr4_1:83573838-83573857 | None:intergenic | 35.0% | |
CAATTCTGTTCAAACTAGTC+TGG | - | chr4_1:83573924-83573943 | None:intergenic | 35.0% | |
AAGTTGGATCACGAATTCAA+TGG | + | chr4_1:83573995-83574014 | Msa0578920:intron | 35.0% | |
GTATGTTGAAGAACTTCATG+AGG | + | chr4_1:83574103-83574122 | Msa0578920:intron | 35.0% | |
TATACTTTATTAGCTGCACG+TGG | + | chr4_1:83574225-83574244 | Msa0578920:intron | 35.0% | |
GTGTTATAGAACTAAGTGAC+TGG | - | chr4_1:83574262-83574281 | None:intergenic | 35.0% | |
TATCTTCTACCCTGTACTTT+AGG | + | chr4_1:83574311-83574330 | Msa0578920:intron | 35.0% | |
TAAATACCAGGCAGTCTATT+TGG | - | chr4_1:83574365-83574384 | None:intergenic | 35.0% | |
GGTTGGAATTACTAAATACC+AGG | - | chr4_1:83574377-83574396 | None:intergenic | 35.0% | |
!! | AATCCAACTTTTTCCAATGC+TGG | - | chr4_1:83574444-83574463 | None:intergenic | 35.0% |
TAGATTAGATCGCTGATAAC+TGG | - | chr4_1:83574499-83574518 | None:intergenic | 35.0% | |
!! | ATGAACTACTTTTAGAGGGT+TGG | + | chr4_1:83574701-83574720 | Msa0578920:intron | 35.0% |
CCACTAGCTAAATGAAAGTA+CGG | + | chr4_1:83574779-83574798 | Msa0578920:intron | 35.0% | |
! | CACTAGCTAAATGAAAGTAC+GGG | + | chr4_1:83574780-83574799 | Msa0578920:intron | 35.0% |
AATGAGTTAGAAGGCAGTTA+AGG | + | chr4_1:83574828-83574847 | Msa0578920:intron | 35.0% | |
TATTTAATCGATGTGGGAGT+TGG | - | chr4_1:83574944-83574963 | None:intergenic | 35.0% | |
TGACTAGAGTTTAGAAAGAG+CGG | + | chr4_1:83574971-83574990 | Msa0578920:intron | 35.0% | |
!! | AAAATTGGCTTGTAAGGTGA+GGG | - | chr4_1:83575000-83575019 | None:intergenic | 35.0% |
!! | CCTTACAAAATTGGCTTGTA+AGG | - | chr4_1:83575006-83575025 | None:intergenic | 35.0% |
! | CCTTACAAGCCAATTTTGTA+AGG | + | chr4_1:83575003-83575022 | Msa0578920:intron | 35.0% |
! | GGTATCATAGTCTATCGATT+TGG | + | chr4_1:83575057-83575076 | Msa0578920:intron | 35.0% |
CATGCGTGTATATAAATGGT+GGG | - | chr4_1:83575086-83575105 | None:intergenic | 35.0% | |
TCATGCGTGTATATAAATGG+TGG | - | chr4_1:83575087-83575106 | None:intergenic | 35.0% | |
GCTTCATGCGTGTATATAAA+TGG | - | chr4_1:83575090-83575109 | None:intergenic | 35.0% | |
! | AAAAATGGCTTGTAAGGTGA+GGG | - | chr4_1:83575180-83575199 | None:intergenic | 35.0% |
! | CCTTACAAAAATGGCTTGTA+AGG | - | chr4_1:83575186-83575205 | None:intergenic | 35.0% |
!!! | CCTTACAAGCCATTTTTGTA+AGG | + | chr4_1:83575183-83575202 | Msa0578920:intron | 35.0% |
GAATGCTGAAATTCACAAGT+TGG | + | chr4_1:83575304-83575323 | Msa0578920:CDS | 35.0% | |
TTGTCCAACATTATCCAACT+GGG | - | chr4_1:83575357-83575376 | None:intergenic | 35.0% | |
TGTTGGACAACAATTAGCAT+TGG | + | chr4_1:83575367-83575386 | Msa0578920:CDS | 35.0% | |
GAAGGACGAAAAAAATAGCT+TGG | - | chr4_1:83575603-83575622 | None:intergenic | 35.0% | |
TGAAGATTCCACATTCGTAA+CGG | - | chr4_1:83575633-83575652 | None:intergenic | 35.0% | |
AAGTAGGTAGTAGTATCACA+AGG | + | chr4_1:83575671-83575690 | Msa0578920:intron | 35.0% | |
AACCAAAGTATATTCCCACT+AGG | - | chr4_1:83575833-83575852 | None:intergenic | 35.0% | |
! | TTCTGAAGATTCAGCCTAAA+TGG | + | chr4_1:83575958-83575977 | Msa0578920:intron | 35.0% |
TCTGAAGATTCAGCCTAAAT+GGG | + | chr4_1:83575959-83575978 | Msa0578920:intron | 35.0% | |
CCTCAAGCAAGAAAAACAAA+AGG | - | chr4_1:83576108-83576127 | None:intergenic | 35.0% | |
!!! | CCTTTTGTTTTTCTTGCTTG+AGG | + | chr4_1:83576105-83576124 | Msa0578920:intron | 35.0% |
ATAGGATAGTAATTGCACCA+TGG | + | chr4_1:83576143-83576162 | Msa0578920:intron | 35.0% | |
!!! | ACTGTAATTTTGAAACGCCA+TGG | - | chr4_1:83576163-83576182 | None:intergenic | 35.0% |
AGCACCTATAGTAGAAAAGT+TGG | + | chr4_1:83576870-83576889 | Msa0578920:intron | 35.0% | |
TGGTAGAAAATAGGCTTAGA+TGG | + | chr4_1:83576890-83576909 | Msa0578920:intron | 35.0% | |
GAAAATAGGCTTAGATGGTT+TGG | + | chr4_1:83576895-83576914 | Msa0578920:intron | 35.0% | |
AAGAAGAGTAGATCAAATGG+AGG | + | chr4_1:83576951-83576970 | Msa0578920:intron | 35.0% | |
AGATTTAGAGGTCAATGAGT+TGG | + | chr4_1:83577035-83577054 | Msa0578920:intron | 35.0% | |
! | CAATGAGTTGGATCCAAATA+TGG | + | chr4_1:83577047-83577066 | Msa0578920:intron | 35.0% |
! | TAGTAGATGACATGTTGACT+TGG | + | chr4_1:83577359-83577378 | Msa0578920:intron | 35.0% |
!! | TTAAATTTGCTGGTCTACTC+TGG | + | chr4_1:83577525-83577544 | Msa0578920:intron | 35.0% |
!! | GAGTTGATGGGTGAAATAAA+GGG | + | chr4_1:83578176-83578195 | Msa0578920:intron | 35.0% |
!! | AGTTGATGGGTGAAATAAAG+GGG | + | chr4_1:83578177-83578196 | Msa0578920:intron | 35.0% |
ATATGCGAAATATGCAGTCA+GGG | - | chr4_1:83578267-83578286 | None:intergenic | 35.0% | |
AATATGCGAAATATGCAGTC+AGG | - | chr4_1:83578268-83578287 | None:intergenic | 35.0% | |
GGAAAAAATTCTTACTGCCT+TGG | + | chr4_1:83578540-83578559 | Msa0578920:intron | 35.0% | |
! | AATCAACAGCACTGAAAACA+TGG | - | chr4_1:83578600-83578619 | None:intergenic | 35.0% |
GAGACATTGAATGCACATAT+TGG | - | chr4_1:83578909-83578928 | None:intergenic | 35.0% | |
! | AGTTGTTTAGAGATTTTGGG+AGG | + | chr4_1:83579483-83579502 | Msa0578920:intron | 35.0% |
TCTGTAAAAATGCACTCTTG+AGG | - | chr4_1:83579759-83579778 | None:intergenic | 35.0% | |
ATGATAAAAAAGGCTCACCT+TGG | + | chr4_1:83579873-83579892 | Msa0578920:CDS | 35.0% | |
CATTACAAACCTTGAATCAG+GGG | - | chr4_1:83579922-83579941 | None:intergenic | 35.0% | |
ACTGTTTATGCTCTGTTTGA+AGG | + | chr4_1:83579962-83579981 | Msa0578920:intron | 35.0% | |
!!! | ATCCTTTTTTCCTATCAGTC+TGG | + | chr4_1:83580185-83580204 | Msa0578920:intron | 35.0% |
TATAAATCATCACCACGTTC+AGG | - | chr4_1:83580471-83580490 | None:intergenic | 35.0% | |
AGCATGTCTGTCTTTATAGA+TGG | + | chr4_1:83580552-83580571 | Msa0578920:intron | 35.0% | |
ATCGATGAAACATCCAAATG+TGG | - | chr4_1:83580731-83580750 | None:intergenic | 35.0% | |
! | TTCATCGATTGTGTATCAAG+TGG | + | chr4_1:83580742-83580761 | Msa0578920:intron | 35.0% |
TTTCAATTCCTTCAACCTTC+AGG | - | chr4_1:83580884-83580903 | None:intergenic | 35.0% | |
!! | TGAAGCATTTCCATTTTTGG+GGG | + | chr4_1:83580985-83581004 | Msa0578920:three_prime_UTR | 35.0% |
GAGACATTATCATATCCCAA+TGG | - | chr4_1:83581059-83581078 | None:intergenic | 35.0% | |
! | ACTTTTCAAACGCGAGAATG+GGG | + | chr4_1:83573055-83573074 | Msa0578920:exon | 40.0% |
! | CGTATTTCTTCAGGTTCGAA+GGG | - | chr4_1:83573098-83573117 | None:intergenic | 40.0% |
CCTTCGAACCTGAAGAAATA+CGG | + | chr4_1:83573096-83573115 | Msa0578920:CDS | 40.0% | |
TTCCTTTATACTCCGTTGCT+TGG | + | chr4_1:83573121-83573140 | Msa0578920:CDS | 40.0% | |
TCCTTTATACTCCGTTGCTT+GGG | + | chr4_1:83573122-83573141 | Msa0578920:CDS | 40.0% | |
!! | GCGATTTGAGAATGGATTGT+GGG | - | chr4_1:83573149-83573168 | None:intergenic | 40.0% |
!! | AGCGATTTGAGAATGGATTG+TGG | - | chr4_1:83573150-83573169 | None:intergenic | 40.0% |
CAGAATTAGGAATACCACTG+CGG | - | chr4_1:83573296-83573315 | None:intergenic | 40.0% | |
! | TTCCTAATTCTGTGTTGCTC+GGG | + | chr4_1:83573304-83573323 | Msa0578920:CDS | 40.0% |
TTCCGAGTTGCCTTATAGAA+TGG | + | chr4_1:83573631-83573650 | Msa0578920:CDS | 40.0% | |
TGCCATTCTATAAGGCAACT+CGG | - | chr4_1:83573636-83573655 | None:intergenic | 40.0% | |
AAATAATGCCTTCTCCGTTG+GGG | - | chr4_1:83573664-83573683 | None:intergenic | 40.0% | |
CAAATAATGCCTTCTCCGTT+GGG | - | chr4_1:83573665-83573684 | None:intergenic | 40.0% | |
ACAAATAATGCCTTCTCCGT+TGG | - | chr4_1:83573666-83573685 | None:intergenic | 40.0% | |
AAAGAAGACCTGCAACACTT+TGG | - | chr4_1:83573701-83573720 | None:intergenic | 40.0% | |
CCAATAGCGAAAAAAATGCC+TGG | - | chr4_1:83573802-83573821 | None:intergenic | 40.0% | |
!!! | CCAGGCATTTTTTTCGCTAT+TGG | + | chr4_1:83573799-83573818 | Msa0578920:intron | 40.0% |
!!! | TTTTTTCGCTATTGGCCTAG+TGG | + | chr4_1:83573807-83573826 | Msa0578920:intron | 40.0% |
GTGTTTATTCGAGTATGGGT+AGG | - | chr4_1:83573833-83573852 | None:intergenic | 40.0% | |
TCGAATAAACACACACACAG+AGG | + | chr4_1:83573841-83573860 | Msa0578920:intron | 40.0% | |
AATAAACACACACACAGAGG+AGG | + | chr4_1:83573844-83573863 | Msa0578920:intron | 40.0% | |
ATAAACACACACACAGAGGA+GGG | + | chr4_1:83573845-83573864 | Msa0578920:intron | 40.0% | |
GTGGTTACATCCTAATGGTT+TGG | - | chr4_1:83573888-83573907 | None:intergenic | 40.0% | |
AGACAGCTACTCATACTTCA+TGG | - | chr4_1:83574063-83574082 | None:intergenic | 40.0% | |
AGTAGCTGTCTAGTATGTTG+AGG | + | chr4_1:83574072-83574091 | Msa0578920:intron | 40.0% | |
GATAAACCAAATAGACTGCC+TGG | + | chr4_1:83574356-83574375 | Msa0578920:intron | 40.0% | |
CTTACAATACACACTACGGT+TGG | - | chr4_1:83574394-83574413 | None:intergenic | 40.0% | |
!! | GATTTTGATCTAGCCAGCAT+TGG | + | chr4_1:83574428-83574447 | Msa0578920:intron | 40.0% |
! | TAGCCAGCATTGGAAAAAGT+TGG | + | chr4_1:83574438-83574457 | Msa0578920:intron | 40.0% |
GCAAGCAATGTTCTTCAATG+TGG | + | chr4_1:83574631-83574650 | Msa0578920:intron | 40.0% | |
!! | CATGTTCTGGGAATTTACAG+TGG | - | chr4_1:83574748-83574767 | None:intergenic | 40.0% |
CCGTACTTTCATTTAGCTAG+TGG | - | chr4_1:83574782-83574801 | None:intergenic | 40.0% | |
GCTCTTTCTAAACTCTAGTC+AGG | - | chr4_1:83574972-83574991 | None:intergenic | 40.0% | |
!! | AAATTGGCTTGTAAGGTGAG+GGG | - | chr4_1:83574999-83575018 | None:intergenic | 40.0% |
!! | CAAAATTGGCTTGTAAGGTG+AGG | - | chr4_1:83575001-83575020 | None:intergenic | 40.0% |
! | AAAATGGCTTGTAAGGTGAG+GGG | - | chr4_1:83575179-83575198 | None:intergenic | 40.0% |
! | CAAAAATGGCTTGTAAGGTG+AGG | - | chr4_1:83575181-83575200 | None:intergenic | 40.0% |
! | AATTCACAAGTTGGGTCTGA+AGG | + | chr4_1:83575313-83575332 | Msa0578920:CDS | 40.0% |
GTTGTCCAACATTATCCAAC+TGG | - | chr4_1:83575358-83575377 | None:intergenic | 40.0% | |
! | GCATTGGCATTCAACAATGA+TGG | + | chr4_1:83575383-83575402 | Msa0578920:CDS | 40.0% |
ATTCGTAACGGTTTGACTGA+AGG | - | chr4_1:83575621-83575640 | None:intergenic | 40.0% | |
TTGGGCTTACCATTATAACC+TGG | - | chr4_1:83575763-83575782 | None:intergenic | 40.0% | |
GGGACAAACAAATGGTTACA+CGG | - | chr4_1:83575806-83575825 | None:intergenic | 40.0% | |
AGTATATTCCCACTAGGTCA+GGG | - | chr4_1:83575827-83575846 | None:intergenic | 40.0% | |
AAGTATATTCCCACTAGGTC+AGG | - | chr4_1:83575828-83575847 | None:intergenic | 40.0% | |
GACCTAGTGGGAATATACTT+TGG | + | chr4_1:83575828-83575847 | Msa0578920:intron | 40.0% | |
GGTTCGTGTTAACAGATACA+AGG | - | chr4_1:83575901-83575920 | None:intergenic | 40.0% | |
! | ATATCGACGGCAATGTTTTC+AGG | - | chr4_1:83575922-83575941 | None:intergenic | 40.0% |
ATTACAGGATGGCAGTCTAA+GGG | + | chr4_1:83576267-83576286 | Msa0578920:intron | 40.0% | |
CTTCACAGTAGAATGAGCAT+TGG | - | chr4_1:83576332-83576351 | None:intergenic | 40.0% | |
CAATGCTCATTCTACTGTGA+AGG | + | chr4_1:83576330-83576349 | Msa0578920:CDS | 40.0% | |
! | CTGTGAAGGACTTGCATTTT+AGG | + | chr4_1:83576344-83576363 | Msa0578920:CDS | 40.0% |
!! | TGGCAAGTTGATTGTCTCTT+TGG | + | chr4_1:83576535-83576554 | Msa0578920:CDS | 40.0% |
!! | GGCAAGTTGATTGTCTCTTT+GGG | + | chr4_1:83576536-83576555 | Msa0578920:CDS | 40.0% |
! | AAGTTGATTGTCTCTTTGGG+AGG | + | chr4_1:83576539-83576558 | Msa0578920:CDS | 40.0% |
TAGACTTGACTAGACAGGAT+AGG | + | chr4_1:83576812-83576831 | Msa0578920:intron | 40.0% | |
TGACTAGACAGGATAGGATT+AGG | + | chr4_1:83576818-83576837 | Msa0578920:intron | 40.0% | |
TCTTCTTACAACGGCATCTA+CGG | - | chr4_1:83576938-83576957 | None:intergenic | 40.0% | |
AGTCAGGTTAAAAGAGGTAG+AGG | + | chr4_1:83576976-83576995 | Msa0578920:intron | 40.0% | |
!! | TAGATGACATGTTGACTTGG+TGG | + | chr4_1:83577362-83577381 | Msa0578920:intron | 40.0% |
CAAGTTTAGGGAAAACAAGC+TGG | - | chr4_1:83577423-83577442 | None:intergenic | 40.0% | |
!!! | AGAAGGTGAATTGGTTTTCC+TGG | + | chr4_1:83578154-83578173 | Msa0578920:intron | 40.0% |
!!! | ATTGGTTTTCCTGGAGTTGA+TGG | + | chr4_1:83578163-83578182 | Msa0578920:intron | 40.0% |
!! | TTGGTTTTCCTGGAGTTGAT+GGG | + | chr4_1:83578164-83578183 | Msa0578920:intron | 40.0% |
TTATTTCACCCATCAACTCC+AGG | - | chr4_1:83578175-83578194 | None:intergenic | 40.0% | |
!! | GGAGTTGATGGGTGAAATAA+AGG | + | chr4_1:83578175-83578194 | Msa0578920:intron | 40.0% |
TGGGTGAAATAAAGGGGATA+AGG | + | chr4_1:83578183-83578202 | Msa0578920:intron | 40.0% | |
GTGAAATAAAGGGGATAAGG+AGG | + | chr4_1:83578186-83578205 | Msa0578920:intron | 40.0% | |
ATAAAGGGGATAAGGAGGTT+AGG | + | chr4_1:83578191-83578210 | Msa0578920:intron | 40.0% | |
CTGTTCTGGCAGCAATATAT+AGG | - | chr4_1:83578734-83578753 | None:intergenic | 40.0% | |
CTATATATTGCTGCCAGAAC+AGG | + | chr4_1:83578732-83578751 | Msa0578920:CDS | 40.0% | |
TGACCTGGAATACACAAACA+TGG | + | chr4_1:83578850-83578869 | Msa0578920:CDS | 40.0% | |
GACCTGGAATACACAAACAT+GGG | + | chr4_1:83578851-83578870 | Msa0578920:CDS | 40.0% | |
TTCCCATGTTTGTGTATTCC+AGG | - | chr4_1:83578856-83578875 | None:intergenic | 40.0% | |
GGAATACACAAACATGGGAA+AGG | + | chr4_1:83578856-83578875 | Msa0578920:CDS | 40.0% | |
! | ATGAACGAGAGGGATTTTGA+AGG | + | chr4_1:83579429-83579448 | Msa0578920:intron | 40.0% |
!! | GGATTTTGAAGGTGGTGTTA+TGG | + | chr4_1:83579440-83579459 | Msa0578920:intron | 40.0% |
!!! | TTTTGAAGGTGGTGTTATGG+TGG | + | chr4_1:83579443-83579462 | Msa0578920:intron | 40.0% |
!! | ACATGTAGCTGTTTCTATGG+AGG | - | chr4_1:83579602-83579621 | None:intergenic | 40.0% |
TATTCTTCTGGTACTTGCAG+TGG | + | chr4_1:83579630-83579649 | Msa0578920:intron | 40.0% | |
TTAAGCTACCTGAAAGCAAG+TGG | + | chr4_1:83579669-83579688 | Msa0578920:intron | 40.0% | |
! | TTACATTGCCACTTGCTTTC+AGG | - | chr4_1:83579680-83579699 | None:intergenic | 40.0% |
! | TAGCATTTTCCCCTGATTCA+AGG | + | chr4_1:83579910-83579929 | Msa0578920:CDS | 40.0% |
CACCAGACTGATAGGAAAAA+AGG | - | chr4_1:83580190-83580209 | None:intergenic | 40.0% | |
! | CCTTGATTGTTAGAGCATCT+CGG | + | chr4_1:83580220-83580239 | Msa0578920:intron | 40.0% |
! | ATTGTTAGAGCATCTCGGAT+GGG | + | chr4_1:83580225-83580244 | Msa0578920:intron | 40.0% |
GAACATGTTCATTCTCCCTA+TGG | - | chr4_1:83580267-83580286 | None:intergenic | 40.0% | |
! | GCAATTAACTTTGCCACTTC+AGG | - | chr4_1:83580315-83580334 | None:intergenic | 40.0% |
AGTGCATTGTAGAGACCATT+TGG | + | chr4_1:83580428-83580447 | Msa0578920:intron | 40.0% | |
AGTAAGCAGCTATTGCAAGT+AGG | - | chr4_1:83580860-83580879 | None:intergenic | 40.0% | |
AATAGCTGCTTACTTCCTGA+AGG | + | chr4_1:83580866-83580885 | Msa0578920:CDS | 40.0% | |
CACTAAACTTCCCCCAAAAA+TGG | - | chr4_1:83580998-83581017 | None:intergenic | 40.0% | |
ATTCTGAGTGGTTGTACCAT+TGG | + | chr4_1:83581040-83581059 | Msa0578920:three_prime_UTR | 40.0% | |
TTCTGAGTGGTTGTACCATT+GGG | + | chr4_1:83581041-83581060 | Msa0578920:three_prime_UTR | 40.0% | |
! | CCGTATTTCTTCAGGTTCGA+AGG | - | chr4_1:83573099-83573118 | None:intergenic | 45.0% |
AAGGAACGCCGTATTTCTTC+AGG | - | chr4_1:83573107-83573126 | None:intergenic | 45.0% | |
ACCCAAGCAACGGAGTATAA+AGG | - | chr4_1:83573126-83573145 | None:intergenic | 45.0% | |
GTCGGAGGAATGATCATCAT+CGG | - | chr4_1:83573187-83573206 | None:intergenic | 45.0% | |
TTTATGATCGGCAGCATCGT+CGG | - | chr4_1:83573205-83573224 | None:intergenic | 45.0% | |
TGCCGATCATAAATCTTCGC+CGG | + | chr4_1:83573212-83573231 | Msa0578920:CDS | 45.0% | |
CTCCGGCGAAGATTTATGAT+CGG | - | chr4_1:83573217-83573236 | None:intergenic | 45.0% | |
TCATAAATCTTCGCCGGAGA+CGG | + | chr4_1:83573218-83573237 | Msa0578920:CDS | 45.0% | |
! | GGGTGAAGTGCCATTCTATA+AGG | - | chr4_1:83573644-83573663 | None:intergenic | 45.0% |
!! | TGGAAAAGCCAAAGTGTTGC+AGG | + | chr4_1:83573690-83573709 | Msa0578920:CDS | 45.0% |
TAAACACACACACAGAGGAG+GGG | + | chr4_1:83573846-83573865 | Msa0578920:intron | 45.0% | |
ATCCTCACAGCCAAACCATT+AGG | + | chr4_1:83573875-83573894 | Msa0578920:intron | 45.0% | |
! | ATCCTAATGGTTTGGCTGTG+AGG | - | chr4_1:83573880-83573899 | None:intergenic | 45.0% |
ACCATTAGGATGTAACCACG+AGG | + | chr4_1:83573889-83573908 | Msa0578920:intron | 45.0% | |
TCCTCGTGGTTACATCCTAA+TGG | - | chr4_1:83573893-83573912 | None:intergenic | 45.0% | |
ACAGAATTGTAAGCCGTGCT+TGG | + | chr4_1:83573935-83573954 | Msa0578920:intron | 45.0% | |
CAGAATTGTAAGCCGTGCTT+GGG | + | chr4_1:83573936-83573955 | Msa0578920:intron | 45.0% | |
!! | ACTTTTAGAGGGTTGGCAAC+TGG | + | chr4_1:83574708-83574727 | Msa0578920:intron | 45.0% |
ATTTAGCTAGTGGCAGCACT+AGG | - | chr4_1:83574772-83574791 | None:intergenic | 45.0% | |
GTTAAGGTCATGTGTTGCGT+TGG | + | chr4_1:83574844-83574863 | Msa0578920:intron | 45.0% | |
! | GCGTGTATATAAATGGTGGG+TGG | - | chr4_1:83575083-83575102 | None:intergenic | 45.0% |
TCAAACCATCTGCATGTGCA+AGG | - | chr4_1:83575269-83575288 | None:intergenic | 45.0% | |
CACATGCAGATGGTTTGACT+GGG | + | chr4_1:83575271-83575290 | Msa0578920:intron | 45.0% | |
CTCACCCAGTTGGATAATGT+TGG | + | chr4_1:83575350-83575369 | Msa0578920:CDS | 45.0% | |
CAGTCAAACCGTTACGAATG+TGG | + | chr4_1:83575622-83575641 | Msa0578920:intron | 45.0% | |
TAGGTCAGGGGACAAACAAA+TGG | - | chr4_1:83575814-83575833 | None:intergenic | 45.0% | |
GTATATTCCCACTAGGTCAG+GGG | - | chr4_1:83575826-83575845 | None:intergenic | 45.0% | |
GAAGATTCAGCCTAAATGGG+TGG | + | chr4_1:83575962-83575981 | Msa0578920:intron | 45.0% | |
CATTACAGGATGGCAGTCTA+AGG | + | chr4_1:83576266-83576285 | Msa0578920:intron | 45.0% | |
!! | GCAGTCTAAGGGTTTTCAAG+TGG | + | chr4_1:83576278-83576297 | Msa0578920:CDS | 45.0% |
!! | TGATGGATTGTGGCTTAGTC+TGG | + | chr4_1:83576489-83576508 | Msa0578920:intron | 45.0% |
! | TGTCTGTCTTGCAGTTCTGA+TGG | + | chr4_1:83576515-83576534 | Msa0578920:intron | 45.0% |
! | TTGATTGTCTCTTTGGGAGG+TGG | + | chr4_1:83576542-83576561 | Msa0578920:CDS | 45.0% |
CAGGATAGACTTGACTAGAC+AGG | + | chr4_1:83576807-83576826 | Msa0578920:intron | 45.0% | |
TGACACCATTAGAGAGAGAG+TGG | + | chr4_1:83576843-83576862 | Msa0578920:intron | 45.0% | |
GACACCATTAGAGAGAGAGT+GGG | + | chr4_1:83576844-83576863 | Msa0578920:intron | 45.0% | |
ACACCATTAGAGAGAGAGTG+GGG | + | chr4_1:83576845-83576864 | Msa0578920:intron | 45.0% | |
CTTCTTACAACGGCATCTAC+GGG | - | chr4_1:83576937-83576956 | None:intergenic | 45.0% | |
AGATCAAATGGAGGAGAGTC+AGG | + | chr4_1:83576960-83576979 | Msa0578920:intron | 45.0% | |
GAGGAGAGTCAGGTTAAAAG+AGG | + | chr4_1:83576970-83576989 | Msa0578920:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4_1:83577116-83577135 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4_1:83577117-83577136 | None:intergenic | 45.0% |
TAATTGGTCAGACCAGCATG+CGG | + | chr4_1:83577481-83577500 | Msa0578920:intron | 45.0% | |
TCAAACAAAGGATGGGACTC+AGG | + | chr4_1:83578707-83578726 | Msa0578920:CDS | 45.0% | |
!!! | GTTTTGGAAGCATTGTGACC+TGG | + | chr4_1:83578835-83578854 | Msa0578920:CDS | 45.0% |
GCATTCAATGTCTCAGCTGA+TGG | + | chr4_1:83578915-83578934 | Msa0578920:CDS | 45.0% | |
CTCAGCTGATGGAAAGTTTC+TGG | + | chr4_1:83578926-83578945 | Msa0578920:CDS | 45.0% | |
!! | CTGATGGAAAGTTTCTGGCA+TGG | + | chr4_1:83578931-83578950 | Msa0578920:CDS | 45.0% |
!! | TTTAGACTTTGGCTCGGTTG+AGG | + | chr4_1:83578960-83578979 | Msa0578920:intron | 45.0% |
GTTAAGCAACAGTGTGCTTG+TGG | + | chr4_1:83579167-83579186 | Msa0578920:intron | 45.0% | |
GTTAAGCAACAGTGTGCTTG+TGG | + | chr4_1:83579167-83579186 | Msa0578920:intron | 45.0% | |
!! | AACGAGAGGGATTTTGAAGG+TGG | + | chr4_1:83579432-83579451 | Msa0578920:intron | 45.0% |
TTTGGGAGGAATAACGTGTG+CGG | + | chr4_1:83579497-83579516 | Msa0578920:intron | 45.0% | |
GTCAAACATGTGGTTCACTG+TGG | - | chr4_1:83579575-83579594 | None:intergenic | 45.0% | |
TGGAGGACAAGTCAAACATG+TGG | - | chr4_1:83579585-83579604 | None:intergenic | 45.0% | |
AATGCACTCTTGAGGTCTGA+AGG | - | chr4_1:83579751-83579770 | None:intergenic | 45.0% | |
! | TTTGGTGGCTTGATATGCAG+CGG | + | chr4_1:83579795-83579814 | Msa0578920:intron | 45.0% |
CTAAAGCAGTTACTACGCCA+AGG | - | chr4_1:83579893-83579912 | None:intergenic | 45.0% | |
GGCTTCTATATTCAGGGCAT+TGG | + | chr4_1:83580003-83580022 | Msa0578920:intron | 45.0% | |
TATCCATGGATTCAAGTGCG+AGG | + | chr4_1:83580032-83580051 | Msa0578920:CDS | 45.0% | |
ATCCATGGATTCAAGTGCGA+GGG | + | chr4_1:83580033-83580052 | Msa0578920:CDS | 45.0% | |
CCGAGATGCTCTAACAATCA+AGG | - | chr4_1:83580223-83580242 | None:intergenic | 45.0% | |
! | GATTGTTAGAGCATCTCGGA+TGG | + | chr4_1:83580224-83580243 | Msa0578920:intron | 45.0% |
! | TTGTTAGAGCATCTCGGATG+GGG | + | chr4_1:83580226-83580245 | Msa0578920:intron | 45.0% |
!! | CTCGGATGGGGGTATTTAAA+AGG | + | chr4_1:83580238-83580257 | Msa0578920:intron | 45.0% |
GTGTATGAAACTCCTGAACG+TGG | + | chr4_1:83580456-83580475 | Msa0578920:intron | 45.0% | |
ACAATGGGGTCATGTGCTAT+AGG | - | chr4_1:83580773-83580792 | None:intergenic | 45.0% | |
GCTTACTTCCTGAAGGTTGA+AGG | + | chr4_1:83580873-83580892 | Msa0578920:CDS | 45.0% | |
!! | TAAAATAATAAATTAATGAA+TGG | - | chr4_1:83575538-83575557 | None:intergenic | 5.0% |
!!! | GATTTATTTATATATTTTTA+TGG | + | chr4_1:83581194-83581213 | Msa0578920:three_prime_UTR | 5.0% |
! | TCTTCAGGTTCGAAGGGTCT+GGG | - | chr4_1:83573092-83573111 | None:intergenic | 50.0% |
! | TTCTTCAGGTTCGAAGGGTC+TGG | - | chr4_1:83573093-83573112 | None:intergenic | 50.0% |
GGAGGAATGATCATCATCGG+CGG | - | chr4_1:83573184-83573203 | None:intergenic | 50.0% | |
GGCAAACACGACGTACTTTC+CGG | - | chr4_1:83573256-83573275 | None:intergenic | 50.0% | |
! | GGAAAGTACGTCGTGTTTGC+CGG | + | chr4_1:83573255-83573274 | Msa0578920:CDS | 50.0% |
TGCCCGAGCAACACAGAATT+AGG | - | chr4_1:83573309-83573328 | None:intergenic | 50.0% | |
CGGGCATTTCGATGTTGCAT+CGG | + | chr4_1:83573323-83573342 | Msa0578920:CDS | 50.0% | |
GGATTCTCTCTCTGATCCAC+CGG | + | chr4_1:83573344-83573363 | Msa0578920:CDS | 50.0% | |
AGAATGGCACTTCACCCCAA+CGG | + | chr4_1:83573647-83573666 | Msa0578920:CDS | 50.0% | |
AAACACACACACAGAGGAGG+GGG | + | chr4_1:83573847-83573866 | Msa0578920:intron | 50.0% | |
TAACTTGGTCAGCCCAAGCA+CGG | - | chr4_1:83573951-83573970 | None:intergenic | 50.0% | |
! | AGGGTTGGCAACTGGATGAT+TGG | + | chr4_1:83574716-83574735 | Msa0578920:intron | 50.0% |
GCAGCACTAGGACATGTTCT+GGG | - | chr4_1:83574760-83574779 | None:intergenic | 50.0% | |
GTACGGGTTTACTGCATTGC+AGG | + | chr4_1:83574796-83574815 | Msa0578920:intron | 50.0% | |
GCATGAAGCCCAATAGTGCT+GGG | + | chr4_1:83575101-83575120 | Msa0578920:intron | 50.0% | |
CATGAAGCCCAATAGTGCTG+GGG | + | chr4_1:83575102-83575121 | Msa0578920:intron | 50.0% | |
! | ATGAAGCCCAATAGTGCTGG+GGG | + | chr4_1:83575103-83575122 | Msa0578920:intron | 50.0% |
CTATGCCTTGCACATGCAGA+TGG | + | chr4_1:83575261-83575280 | Msa0578920:intron | 50.0% | |
GCACATGCAGATGGTTTGAC+TGG | + | chr4_1:83575270-83575289 | Msa0578920:intron | 50.0% | |
AGAGAAGCTTCTCACCCAGT+TGG | + | chr4_1:83575340-83575359 | Msa0578920:CDS | 50.0% | |
GATGGTACTACACTAGCTGC+TGG | + | chr4_1:83575401-83575420 | Msa0578920:CDS | 50.0% | |
TTGTTTGTCCCCTGACCTAG+TGG | + | chr4_1:83575815-83575834 | Msa0578920:intron | 50.0% | |
TGTTTGTCCCCTGACCTAGT+GGG | + | chr4_1:83575816-83575835 | Msa0578920:intron | 50.0% | |
! | TTGTCGGTTGCCACCCATTT+AGG | - | chr4_1:83575975-83575994 | None:intergenic | 50.0% |
!!! | GGTTTTCAAGTGGCCTAGCA+TGG | + | chr4_1:83576288-83576307 | Msa0578920:CDS | 50.0% |
! | ATTGTCTCTTTGGGAGGTGG+CGG | + | chr4_1:83576545-83576564 | Msa0578920:CDS | 50.0% |
AAACATCCCAAACCCTGCAG+GGG | - | chr4_1:83576571-83576590 | None:intergenic | 50.0% | |
GAAACATCCCAAACCCTGCA+GGG | - | chr4_1:83576572-83576591 | None:intergenic | 50.0% | |
AGAAACATCCCAAACCCTGC+AGG | - | chr4_1:83576573-83576592 | None:intergenic | 50.0% | |
CACCATTAGAGAGAGAGTGG+GGG | + | chr4_1:83576846-83576865 | Msa0578920:intron | 50.0% | |
TACCCCCACTCTCTCTCTAA+TGG | - | chr4_1:83576851-83576870 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr4_1:83577112-83577131 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4_1:83577118-83577137 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | chr4_1:83577115-83577134 | Msa0578920:intron | 50.0% | |
AATTGGTCAGACCAGCATGC+GGG | + | chr4_1:83577482-83577501 | Msa0578920:intron | 50.0% | |
! | GGAAGGAGGGAGTATGTTGT+TGG | - | chr4_1:83578233-83578252 | None:intergenic | 50.0% |
GGCTTGTAACAAGGGAAGGA+GGG | - | chr4_1:83578246-83578265 | None:intergenic | 50.0% | |
TCAGGGCTTGTAACAAGGGA+AGG | - | chr4_1:83578250-83578269 | None:intergenic | 50.0% | |
GCAGTCAGGGCTTGTAACAA+GGG | - | chr4_1:83578254-83578273 | None:intergenic | 50.0% | |
TGCAGTCAGGGCTTGTAACA+AGG | - | chr4_1:83578255-83578274 | None:intergenic | 50.0% | |
TTACTGCCTTGGGCGAACAT+GGG | + | chr4_1:83578551-83578570 | Msa0578920:intron | 50.0% | |
CATATTCCCATGTTCGCCCA+AGG | - | chr4_1:83578560-83578579 | None:intergenic | 50.0% | |
CTTGGGCGAACATGGGAATA+TGG | + | chr4_1:83578558-83578577 | Msa0578920:intron | 50.0% | |
TGTGCTTGTGGATGAACGAG+AGG | + | chr4_1:83579179-83579198 | Msa0578920:intron | 50.0% | |
GTGCTTGTGGATGAACGAGA+GGG | + | chr4_1:83579180-83579199 | Msa0578920:intron | 50.0% | |
TGGATGAACGAGAGGGACTT+TGG | + | chr4_1:83579187-83579206 | Msa0578920:intron | 50.0% | |
TGTGCTTGTGGATGAACGAG+AGG | + | chr4_1:83579179-83579198 | Msa0578920:intron | 50.0% | |
GTGCTTGTGGATGAACGAGA+GGG | + | chr4_1:83579180-83579199 | Msa0578920:intron | 50.0% | |
!! | GTGTTATGGTGGACAGTGAG+TGG | + | chr4_1:83579454-83579473 | Msa0578920:intron | 50.0% |
ATATGCAGCGGAACACCTGA+AGG | + | chr4_1:83579807-83579826 | Msa0578920:intron | 50.0% | |
!! | GGCATTGGCTTCTGTATCCA+TGG | + | chr4_1:83580018-83580037 | Msa0578920:CDS | 50.0% |
TACCCTCGCACTTGAATCCA+TGG | - | chr4_1:83580038-83580057 | None:intergenic | 50.0% | |
! | TGTTAGAGCATCTCGGATGG+GGG | + | chr4_1:83580227-83580246 | Msa0578920:intron | 50.0% |
TCCATTGGAGGAACCTGAAG+TGG | + | chr4_1:83580299-83580318 | Msa0578920:intron | 50.0% | |
CGATTGTGTATCAAGTGGCG+TGG | + | chr4_1:83580747-83580766 | Msa0578920:intron | 50.0% | |
TTTAAGGAGGAGGACTGAGC+TGG | + | chr4_1:83580814-83580833 | Msa0578920:intron | 50.0% | |
GGATTGTGGGACCCAAGCAA+CGG | - | chr4_1:83573136-83573155 | None:intergenic | 55.0% | |
GCGTCAATTGCTTCCGTCTC+CGG | - | chr4_1:83573234-83573253 | None:intergenic | 55.0% | |
GAGACGGAAGCAATTGACGC+CGG | + | chr4_1:83573234-83573253 | Msa0578920:CDS | 55.0% | |
AAGTACGTCGTGTTTGCCGG+TGG | + | chr4_1:83573258-83573277 | Msa0578920:CDS | 55.0% | |
TCGAGTATGGGTAGGCCACT+AGG | - | chr4_1:83573825-83573844 | None:intergenic | 55.0% | |
AACACACACACAGAGGAGGG+GGG | + | chr4_1:83573848-83573867 | Msa0578920:intron | 55.0% | |
! | GTCTGGCTTCAATGTCCTCG+TGG | - | chr4_1:83573907-83573926 | None:intergenic | 55.0% |
GGCAGCACTAGGACATGTTC+TGG | - | chr4_1:83574761-83574780 | None:intergenic | 55.0% | |
CGGGTTTACTGCATTGCAGG+AGG | + | chr4_1:83574799-83574818 | Msa0578920:intron | 55.0% | |
CGCATGAAGCCCAATAGTGC+TGG | + | chr4_1:83575100-83575119 | Msa0578920:intron | 55.0% | |
GGTACTACACTAGCTGCTGG+TGG | + | chr4_1:83575404-83575423 | Msa0578920:CDS | 55.0% | |
TACACTAGCTGCTGGTGGAG+AGG | + | chr4_1:83575409-83575428 | Msa0578920:CDS | 55.0% | |
! | AGCTGCTGGTGGAGAGGTAT+TGG | + | chr4_1:83575415-83575434 | Msa0578920:intron | 55.0% |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr4_1:83577104-83577123 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr4_1:83577103-83577122 | Msa0578920:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr4_1:83577104-83577123 | Msa0578920:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr4_1:83577110-83577129 | Msa0578920:intron | 55.0% | |
TTGAACCGTCAGACCAGCAC+TGG | + | chr4_1:83577394-83577413 | Msa0578920:intron | 55.0% | |
AACAAGCTGGTTGCCAGTGC+TGG | - | chr4_1:83577410-83577429 | None:intergenic | 55.0% | |
GGGCTTGTAACAAGGGAAGG+AGG | - | chr4_1:83578247-83578266 | None:intergenic | 55.0% | |
CTTACTGCCTTGGGCGAACA+TGG | + | chr4_1:83578550-83578569 | Msa0578920:intron | 55.0% | |
GAACGAGAGGGACTTTGGCT+AGG | + | chr4_1:83579192-83579211 | Msa0578920:intron | 55.0% | |
GAGGGACTTTGGCTAGGTTG+AGG | + | chr4_1:83579198-83579217 | Msa0578920:intron | 55.0% | |
! | GCCACTTCAGGTTCCTCCAA+TGG | - | chr4_1:83580303-83580322 | None:intergenic | 55.0% |
ATGATCGGCAGCATCGTCGG+AGG | - | chr4_1:83573202-83573221 | None:intergenic | 60.0% | |
TACGTCGTGTTTGCCGGTGG+CGG | + | chr4_1:83573261-83573280 | Msa0578920:CDS | 60.0% | |
GCACTTCACCCCAACGGAGA+AGG | + | chr4_1:83573653-83573672 | Msa0578920:CDS | 60.0% | |
CCCTCACCCCCAGCACTATT+GGG | - | chr4_1:83575112-83575131 | None:intergenic | 60.0% | |
! | CCCAATAGTGCTGGGGGTGA+GGG | + | chr4_1:83575109-83575128 | Msa0578920:intron | 60.0% |
! | CCAATAGTGCTGGGGGTGAG+GGG | + | chr4_1:83575110-83575129 | Msa0578920:intron | 60.0% |
! | CAATAGTGCTGGGGGTGAGG+GGG | + | chr4_1:83575111-83575130 | Msa0578920:intron | 60.0% |
!! | GGTTGCCAGTGCTGGTCTGA+CGG | - | chr4_1:83577402-83577421 | None:intergenic | 60.0% |
AAGGAGGAGGACTGAGCTGG+TGG | + | chr4_1:83580817-83580836 | Msa0578920:intron | 60.0% | |
! | GCCCAATAGTGCTGGGGGTG+AGG | + | chr4_1:83575108-83575127 | Msa0578920:intron | 65.0% |
CCCCTCACCCCCAGCACTAT+TGG | - | chr4_1:83575113-83575132 | None:intergenic | 65.0% | |
CTGGGAATCTGCCCGCATGC+TGG | - | chr4_1:83577496-83577515 | None:intergenic | 65.0% | |
! | GTCGTGTTTGCCGGTGGCGG+TGG | + | chr4_1:83573264-83573283 | Msa0578920:CDS | 70.0% |
GCGGCTATCTCCACCGCCAC+CGG | - | chr4_1:83573277-83573296 | None:intergenic | 70.0% | |
GGCGGTGGAGATAGCCGCAG+TGG | + | chr4_1:83573279-83573298 | Msa0578920:CDS | 70.0% | |
TGGCGGCCCCTGCAGGGTTT+GGG | + | chr4_1:83576562-83576581 | Msa0578920:CDS | 70.0% | |
GTGGCGGCCCCTGCAGGGTT+TGG | + | chr4_1:83576561-83576580 | Msa0578920:CDS | 75.0% | |
!! | TGGGAGGTGGCGGCCCCTGC+AGG | + | chr4_1:83576555-83576574 | Msa0578920:CDS | 80.0% |
!! | GGGAGGTGGCGGCCCCTGCA+GGG | + | chr4_1:83576556-83576575 | Msa0578920:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 83572959 | 83581248 | 83572959 | ID=Msa0578920;Name=Msa0578920 |
chr4_1 | mRNA | 83572959 | 83581248 | 83572959 | ID=Msa0578920-mRNA-1;Parent=Msa0578920;Name=Msa0578920-mRNA-1;_AED=0.05;_eAED=0.05;_QI=113|1|1|1|1|1|10|313|411 |
chr4_1 | exon | 83572959 | 83573365 | 83572959 | ID=Msa0578920-mRNA-1:exon:30424;Parent=Msa0578920-mRNA-1 |
chr4_1 | exon | 83573611 | 83573711 | 83573611 | ID=Msa0578920-mRNA-1:exon:30425;Parent=Msa0578920-mRNA-1 |
chr4_1 | exon | 83575280 | 83575430 | 83575280 | ID=Msa0578920-mRNA-1:exon:30426;Parent=Msa0578920-mRNA-1 |
chr4_1 | exon | 83576274 | 83576365 | 83576274 | ID=Msa0578920-mRNA-1:exon:30427;Parent=Msa0578920-mRNA-1 |
chr4_1 | exon | 83576529 | 83576628 | 83576529 | ID=Msa0578920-mRNA-1:exon:30428;Parent=Msa0578920-mRNA-1 |
chr4_1 | exon | 83578678 | 83578753 | 83578678 | ID=Msa0578920-mRNA-1:exon:30429;Parent=Msa0578920-mRNA-1 |
chr4_1 | exon | 83578829 | 83578952 | 83578829 | ID=Msa0578920-mRNA-1:exon:30430;Parent=Msa0578920-mRNA-1 |
chr4_1 | exon | 83579815 | 83579931 | 83579815 | ID=Msa0578920-mRNA-1:exon:30431;Parent=Msa0578920-mRNA-1 |
chr4_1 | exon | 83580018 | 83580082 | 83580018 | ID=Msa0578920-mRNA-1:exon:30432;Parent=Msa0578920-mRNA-1 |
chr4_1 | exon | 83580820 | 83581248 | 83580820 | ID=Msa0578920-mRNA-1:exon:30433;Parent=Msa0578920-mRNA-1 |
chr4_1 | five_prime_UTR | 83572959 | 83573071 | 83572959 | ID=Msa0578920-mRNA-1:five_prime_utr;Parent=Msa0578920-mRNA-1 |
chr4_1 | CDS | 83573072 | 83573365 | 83573072 | ID=Msa0578920-mRNA-1:cds;Parent=Msa0578920-mRNA-1 |
chr4_1 | CDS | 83573611 | 83573711 | 83573611 | ID=Msa0578920-mRNA-1:cds;Parent=Msa0578920-mRNA-1 |
chr4_1 | CDS | 83575280 | 83575430 | 83575280 | ID=Msa0578920-mRNA-1:cds;Parent=Msa0578920-mRNA-1 |
chr4_1 | CDS | 83576274 | 83576365 | 83576274 | ID=Msa0578920-mRNA-1:cds;Parent=Msa0578920-mRNA-1 |
chr4_1 | CDS | 83576529 | 83576628 | 83576529 | ID=Msa0578920-mRNA-1:cds;Parent=Msa0578920-mRNA-1 |
chr4_1 | CDS | 83578678 | 83578753 | 83578678 | ID=Msa0578920-mRNA-1:cds;Parent=Msa0578920-mRNA-1 |
chr4_1 | CDS | 83578829 | 83578952 | 83578829 | ID=Msa0578920-mRNA-1:cds;Parent=Msa0578920-mRNA-1 |
chr4_1 | CDS | 83579815 | 83579931 | 83579815 | ID=Msa0578920-mRNA-1:cds;Parent=Msa0578920-mRNA-1 |
chr4_1 | CDS | 83580018 | 83580082 | 83580018 | ID=Msa0578920-mRNA-1:cds;Parent=Msa0578920-mRNA-1 |
chr4_1 | CDS | 83580820 | 83580935 | 83580820 | ID=Msa0578920-mRNA-1:cds;Parent=Msa0578920-mRNA-1 |
chr4_1 | three_prime_UTR | 83580936 | 83581248 | 83580936 | ID=Msa0578920-mRNA-1:three_prime_utr;Parent=Msa0578920-mRNA-1 |
Gene Sequence |
Protein sequence |